Prupe.7G156300_v2.0.a1

Component of the anaphase promoting complex cyclosome (APC C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
16513981 .. 16516175
2195 bp
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UTR
Exon/CDS
Intron
Prupe.7G156300.1

Sequence Viewer

Length: 579 bp
ATGGCGACAGAATCATCAGAGGGGGAAGAGGAAGGGAAGCTGACAGGAGGGAACCAAGTGCTAACAGTGGACGATGATCTCAGAGAAATGGGCAAGAAGGCCGCTTGGAGTGTCAGCTCTTGCAAGGCCGGCAATGGCGTCTCATCTCTTCGTGACGACAATCTTGATACTTATTGGCAATCGGATGGTGCGCAACCTCATTTAGTAAACATTCAATTCCAGAAGAAAGTGAAGCTCCAACTTGTTGTTCTCTATGTGGATTTCAAGCTTGATGAGAGCTATACACCTTGTAAGATCTCAATTCGTGCCGGGGATGGCTTCCACAACTTGAAGGACATAAAAACTGTTGAGCTCGATAAGCCAACTGGTTGGGTTCATATATCATTGTCTGGAAATGATCCTAGGGAAACTTTTGTCAATACTTTTATGCTGCAAATCTCCGTGCTATCAAATCACCTTAATGGAAGGGACACTCATGTGCGGCAGATCAAAGTTTACGGCCCTCGACCGAACCCTATTCCGCATCAGCCATTTCAGTTTACTTCAAGAGAGTTCATCACCTATTCTTCTGTGAGATGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

193

Amino Acids

21.6

Weight (kDa)

6.3

Isoelectric Point (pI)

25.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015965)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18290
fragaria_vesca FvH4_1g13080 FvH4_1g13080 FvH4_5g29620
malus_domestica MD02G1145400.v1.1
prunus_persica Prupe.7G156300_v2.0.a1
pyrus_communis pycom02g11510
rosa_chinensis RchiOBHm_Chr2g0101251
rosa_laevigata RLG00000017065
rosa_multiflora Rmu_sc0006314.1_g000017
rosa_roxburghii Rroxscaffold_2G00141460
rosa_rugosa Rorug02G0099700 Rorug02G0099800
rosa_samantha Rh2CG151300
rosa_wichuraiana Rw2G011350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 192
AciI CCGC 3 cut(s) 102, 481, 521
AclWI GGATC 1 cut(s) 392
AcyI GRCGYC 1 cut(s) 138
AgsI TTSAA 4 cut(s) 215, 265, 331, 546
AjuI GAANNNNNNNTTGG 2 cut(s) 231, 263
AleI CACNNNNGTG 1 cut(s) 476
AluBI AGCT 6 cut(s) 40, 117, 235, 268, 279, 352
AluI AGCT 6 cut(s) 40, 117, 235, 268, 279, 352
Alw21I GWGCWC 1 cut(s) 354
Alw26I GTCTC 1 cut(s) 145
AlwI GGATC 1 cut(s) 392
AoxI GGCC 3 cut(s) 99, 126, 499
ApeKI GCWGC 1 cut(s) 430
AspA2I CCTAGG 1 cut(s) 401
AspLEI GCGC 1 cut(s) 193
AspS9I GGNCC 1 cut(s) 500
AsuC2I CCSGG 1 cut(s) 310
AsuHPI GGTGA 2 cut(s) 446, 550
AvrII CCTAGG 1 cut(s) 401
BanII GRGCYC 1 cut(s) 354
Bbv12I GWGCWC 1 cut(s) 354
BbvI GCAGC 1 cut(s) 417
BccI CCATC 2 cut(s) 179, 308
BceAI ACGGC 1 cut(s) 514
BcnI CCSGG 1 cut(s) 310
BcoDI GTCTC 1 cut(s) 145
BfaI CTAG 1 cut(s) 402
BglII AGATCT 1 cut(s) 294
BisI GCNGC 3 cut(s) 102, 431, 482
BlnI CCTAGG 1 cut(s) 401
BlsI GCNGC 3 cut(s) 103, 432, 483
Bme1390I CCNGG 1 cut(s) 310
BmgT120I GGNCC 1 cut(s) 500
BmiI GGNNCC 1 cut(s) 53
BmrFI CCNGG 1 cut(s) 310
BmsI GCATC 1 cut(s) 532
BpuMI CCSGG 1 cut(s) 310
BsaHI GRCGYC 1 cut(s) 138
BsaJI CCNNGG 2 cut(s) 309, 401
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 1 cut(s) 370
Bse3DI GCAATG 1 cut(s) 139
BseDI CCNNGG 2 cut(s) 309, 401
BseGI GGATG 2 cut(s) 190, 319
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 1 cut(s) 94
BseNI ACTGG 1 cut(s) 370
BseXI GCAGC 1 cut(s) 417
Bsh1285I CGRYCG 1 cut(s) 509
BshFI GGCC 3 cut(s) 101, 128, 501
BsiEI CGRYCG 1 cut(s) 509
BsiHKAI GWGCWC 1 cut(s) 354
BsiSI CCGG 2 cut(s) 129, 309
BslFI GGGAC 1 cut(s) 482
BsmAI GTCTC 1 cut(s) 145
BsmBI CGTCTC 1 cut(s) 145
BsmFI GGGAC 1 cut(s) 482
BsnI GGCC 3 cut(s) 101, 128, 501
Bsp1286I GDGCHC 1 cut(s) 354
Bsp143I GATC 4 cut(s) 76, 294, 397, 486
BspACI CCGC 3 cut(s) 102, 481, 521
BspANI GGCC 3 cut(s) 101, 128, 501
BspCNI CTCAG 1 cut(s) 93
BspLI GGNNCC 1 cut(s) 53
BspPI GGATC 1 cut(s) 392
BsrDI GCAATG 1 cut(s) 139
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 1 cut(s) 370
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 2 cut(s) 309, 401
BssMI GATC 4 cut(s) 76, 294, 397, 486
BssNI GRCGYC 1 cut(s) 138
BssT1I CCWWGG 1 cut(s) 401
Bst4CI ACNGT 2 cut(s) 67, 346
Bst6I CTCTTC 2 cut(s) 21, 153
BstACI GRCGYC 1 cut(s) 138
BstC8I GCNNGC 1 cut(s) 130
BstDEI CTNAG 1 cut(s) 80
BstF5I GGATG 2 cut(s) 190, 319
BstHHI GCGC 1 cut(s) 193
BstKTI GATC 4 cut(s) 79, 297, 400, 489
BstMAI GTCTC 1 cut(s) 145
BstMBI GATC 4 cut(s) 76, 294, 397, 486
BstMCI CGRYCG 1 cut(s) 509
BstMWI GCNNNNNNNGC 2 cut(s) 129, 358
BstSCI CCNGG 1 cut(s) 308
BstV1I GCAGC 1 cut(s) 417
BstX2I RGATCY 1 cut(s) 294
BstXI CCANNNNNNTGG 1 cut(s) 369
BstYI RGATCY 1 cut(s) 294
BsuRI GGCC 3 cut(s) 101, 128, 501
BtsCI GGATG 2 cut(s) 190, 319
BtsIMutI CAGTG 1 cut(s) 72
Cac8I GCNNGC 1 cut(s) 130
CfoI GCGC 1 cut(s) 193
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 500
CseI GACGC 1 cut(s) 127
CviAII CATG 1 cut(s) 476
DdeI CTNAG 1 cut(s) 80
DpnI GATC 4 cut(s) 78, 296, 399, 488
DpnII GATC 4 cut(s) 76, 294, 397, 486
Eam1104I CTCTTC 2 cut(s) 21, 153
EarI CTCTTC 2 cut(s) 21, 153
Ecl136II GAGCTC 1 cut(s) 352
Eco130I CCWWGG 1 cut(s) 401
Eco24I GRGCYC 1 cut(s) 354
Eco53kI GAGCTC 1 cut(s) 352
EcoICRI GAGCTC 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 401
EcoT38I GRGCYC 1 cut(s) 354
ErhI CCWWGG 1 cut(s) 401
Esp3I CGTCTC 1 cut(s) 145
FaeI CATG 1 cut(s) 479
FaiI YATR 7 cut(s) 255, 282, 338, 378, 380, 428, 477
FaqI GGGAC 1 cut(s) 482
FatI CATG 1 cut(s) 475
Fnu4HI GCNGC 3 cut(s) 102, 431, 482
FokI GGATG 2 cut(s) 197, 326
FriOI GRGCYC 1 cut(s) 354
Fsp4HI GCNGC 3 cut(s) 102, 431, 482
FspBI CTAG 1 cut(s) 402
FspI TGCGCA 1 cut(s) 192
GlaI GCGC 1 cut(s) 192
GluI GCNGC 3 cut(s) 102, 431, 482
HaeIII GGCC 3 cut(s) 101, 128, 501
HapII CCGG 2 cut(s) 129, 309
HgaI GACGC 1 cut(s) 127
HhaI GCGC 1 cut(s) 193
Hin1I GRCGYC 1 cut(s) 138
Hin1II CATG 1 cut(s) 479
Hin6I GCGC 1 cut(s) 191
HinP1I GCGC 1 cut(s) 191
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 1 cut(s) 11
HpaII CCGG 2 cut(s) 129, 309
HphI GGTGA 2 cut(s) 446, 550
Hpy166II GTNNAC 4 cut(s) 70, 208, 496, 540
Hpy188I TCNGA 3 cut(s) 19, 83, 184
Hpy188III TCNNGA 5 cut(s) 152, 164, 220, 390, 546
Hpy8I GTNNAC 4 cut(s) 70, 208, 496, 540
HpyAV CCTTC 4 cut(s) 26, 91, 325, 459
HpyCH4III ACNGT 2 cut(s) 67, 346
HpyCH4V TGCA 2 cut(s) 123, 433
HpyF10VI GCNNNNNNNGC 2 cut(s) 129, 358
HpyF3I CTNAG 1 cut(s) 80
Hsp92I GRCGYC 1 cut(s) 138
Hsp92II CATG 1 cut(s) 479
HspAI GCGC 1 cut(s) 191
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Kzo9I GATC 4 cut(s) 76, 294, 397, 486
LmnI GCTCC 1 cut(s) 240
LpnPI CCDG 6 cut(s) 30, 142, 233, 322, 351, 375
Lsp1109I GCAGC 1 cut(s) 417
LweI GCATC 1 cut(s) 532
MaeI CTAG 1 cut(s) 402
MaeIII GTNAC 1 cut(s) 152
MalI GATC 4 cut(s) 78, 296, 399, 488
MboI GATC 4 cut(s) 76, 294, 397, 486
MboII GAAGA 4 cut(s) 38, 140, 235, 558
MflI RGATCY 1 cut(s) 294
MhlI GDGCHC 1 cut(s) 354
MluCI AATT 2 cut(s) 215, 300
MmeI TCCRAC 1 cut(s) 262
MnlI CCTC 5 cut(s) 13, 22, 41, 207, 513
MroNI GCCGGC 1 cut(s) 128
MseI TTAA 1 cut(s) 459
MslI CAYNNNNRTG 2 cut(s) 459, 476
MspI CCGG 2 cut(s) 129, 309
MspR9I CCNGG 1 cut(s) 310
MwoI GCNNNNNNNGC 2 cut(s) 129, 358
NaeI GCCGGC 1 cut(s) 130
NciI CCSGG 1 cut(s) 310
NdeII GATC 4 cut(s) 76, 294, 397, 486
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 1 cut(s) 479
NlaIV GGNNCC 1 cut(s) 53
NmuCI GTSAC 1 cut(s) 152
NsbI TGCGCA 1 cut(s) 192
OliI CACNNNNGTG 1 cut(s) 476
PdiI GCCGGC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 11
PkrI GCNGC 3 cut(s) 103, 432, 483
Psp124BI GAGCTC 1 cut(s) 354
PspN4I GGNNCC 1 cut(s) 53
PspPI GGNCC 1 cut(s) 500
PsuI RGATCY 1 cut(s) 294
RseI CAYNNNNRTG 2 cut(s) 459, 476
SacI GAGCTC 1 cut(s) 354
SaqAI TTAA 1 cut(s) 459
SatI GCNGC 3 cut(s) 102, 431, 482
Sau3AI GATC 4 cut(s) 76, 294, 397, 486
Sau96I GGNCC 1 cut(s) 500
ScrFI CCNGG 1 cut(s) 310
SduI GDGCHC 1 cut(s) 354
SfaNI GCATC 1 cut(s) 532
SmiMI CAYNNNNRTG 2 cut(s) 459, 476
Sse9I AATT 2 cut(s) 215, 300
SsiI CCGC 3 cut(s) 102, 481, 521
SspMI CTAG 1 cut(s) 402
SstI GAGCTC 1 cut(s) 354
StyD4I CCNGG 1 cut(s) 308
StyI CCWWGG 1 cut(s) 401
TaaI ACNGT 2 cut(s) 67, 346
TaqI TCGA 2 cut(s) 354, 505
TaqII GACCGA 1 cut(s) 523
TasI AATT 2 cut(s) 215, 300
TauI GCSGC 2 cut(s) 104, 484
TfiI GAWTC 1 cut(s) 11
Tru1I TTAA 1 cut(s) 459
Tru9I TTAA 1 cut(s) 459
TscAI CASTG 1 cut(s) 72
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 1 cut(s) 430
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 2 cut(s) 365, 544
TspGWI ACGGA 1 cut(s) 430
TspRI CASTG 1 cut(s) 72
XmaJI CCTAGG 1 cut(s) 401
XspI CTAG 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.