Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015803

Physical Location & Seq

Genomic Coordinates Forward (+)

16585327 .. 16587963

Gene Structure 2637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G158000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGAAGCATCTAGCTTTGGCTCTTTTTTTAGCTATTCTGATCCGCCAACAAGGTTTTCCCATCCATGTTGAAGCAGGTGATGGCTTCATCAGAACCAGGGGAGTGCATTTTCTTTTGAATGGTAGCCCATACTATGCAAACGGCTTCAATGGCTACTGGTTGATGTATGTGGCTTCTGACCCATCTCAGAGGTACAAAGTTTCATCTGTTTTTCGTGAAGCAACTAGCCATGGGCTCACAGTGGCCAGAACTTGGGCTTTCAGTGATGGAGGTTACAGGCCTCTTCAATACTCCCCTGGCTCCTACAATGAGCAAATGTTCAAGGGGTTGGATTTTGTTATAGCTGAGGCCAGAAGGTATGGGATTAAGCTGATATTAAGCTTGGTGAACAACTATGAGAGCTTTGGTGGAAGGAAGCAGTATGTGAACTGGGCAAGAAGTCAGGGGCAGTACCTGACCTCTGATGATGATTTCTATAGAAACCCTGTTGTTAAGGGTTACTACAAGAACCATGTAACTACTGTTCTTAACAGATATAACAGCTATACTAGAGTTCATTACAAAGATGACCCAACAATTATGGCCTGGGAGCTTATCAATGAACCTAGATGCACATCAGATCCTTCAGGAAGGACTGTTCAGGCTTGGATAATGGAAATGGCTTCTCATGTGAAATCAATAGACAGAAACCACTTGCTGGAAGCTGGTCTAGAAGGATTTTATGGACAAGCAATACCTCAGAGGATGAGACTCAACCCTGGTTTCAATATAGGAACAGACTTTATTGCAAATAATCGGATTCCTGGCATCGATTTTGCAACAGTTCACTCTTATCCTGATCAATGGTTGTCTAGCTCAAATGATCAAAATCAGCTCTCTTTCTTGAACAACTGGCTCGACACCCACATCCAAGATGCACAATACATTCTTCGAAAGCCGGTGTTCATCACAGAATTTGGGAAATCTTGGAAAGATCCTGGTTTCAACACCTACCAAAGAGACTTGCTCTTCAACACTGTGTATTCCAAGATATACTCTTCAGCAAGAAGAGGAGGAGCAGCTGCTGGGGGCCTATTCTGGCAACTTCTCACTGAAGGCATGGACTCGTTCGGTGATGGGTACGATATAGTTCTGAGCCAGAGTCCCTCAACTGCAAATGTAATTGCTCAACAATCTCACAAGCTCTATCAGATCAGGAAGATTTTTGCCAGGATAAGAAATGCTCAGATGTGGAAAAGGGCAAGGGCCATCAGAAGGGCTGAATGGCTGGCTAGAAACAAAGGCAAGCGTATAGGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000272 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0004567 GO:0005575 GO:0005576 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009636 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009845 GO:0009900 GO:0009987 GO:0010035 GO:0010038 GO:0010047 GO:0010154 GO:0010412 GO:0015923 GO:0016043 GO:0016052 GO:0016787 GO:0016798 GO:0016985 GO:0016998 GO:0022414 GO:0032501 GO:0032502 GO:0032504 GO:0042221 GO:0042545 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044464 GO:0045229 GO:0046355 GO:0046686 GO:0048046 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0061687 GO:0071554 GO:0071555 GO:0071585 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0090351 GO:0097501 GO:0098754 GO:1901575 GO:1990059 GO:1990170

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

Cellulase

Protein Analysis

434

Amino Acids

49.7

Weight (kDa)

9.67

Isoelectric Point (pI)

34.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015803)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66460
malus_domestica	MD02G1143700.v1.1 MD15G1257000.v1.1
prunus_persica	Prupe.7G158000_v2.0.a1 Prupe.7G158000_v2.0.a1
pyrus_communis	pycom02g11360 pycom15g22490
rosa_chinensis	RchiOBHm_Chr2g0100951
rosa_laevigata	RLG00000017028
rosa_multiflora	Rmu_sc0001862.1_g000014
rosa_samantha	Rh2AG141600 Rh2BG146800 Rh2CG148100 Rh2DG147300
rosa_wichuraiana	Rw2G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	65
Acc36I	ACCTGC	1 cut(s)	65
AccB7I	CCANNNNNTGG	2 cut(s)	252, 697
AciI	CCGC	1 cut(s)	43
AclWI	GGATC	3 cut(s)	34, 614, 968
AcoI	YGGCCR	1 cut(s)	243
AcsI	RAATTY	1 cut(s)	953
AcuI	CTGAAG	3 cut(s)	609, 1023, 1113
AfaI	GTAC	3 cut(s)	194, 452, 1121
AfiI	CCNNNNNNNGG	3 cut(s)	252, 697, 1254
AgsI	TTSAA	9 cut(s)	71, 118, 148, 287, 322, 766, 886, 985, 1012
AjnI	CCWGG	7 cut(s)	95, 295, 584, 757, 802, 976, 1208
AjuI	GAANNNNNNNTTGG	2 cut(s)	39, 71
AloI	GAACNNNNNNTCC	2 cut(s)	621, 653
Alw26I	GTCTC	2 cut(s)	742, 993
AlwI	GGATC	3 cut(s)	34, 614, 968
AlwNI	CAGNNNCTG	2 cut(s)	454, 1064
AoxI	GGCC	6 cut(s)	243, 278, 348, 582, 1069, 1245
ApeKI	GCWGC	2 cut(s)	1058, 1061
ApoI	RAATTY	1 cut(s)	953
AspS9I	GGNCC	2 cut(s)	1069, 1245
AsuHPI	GGTGA	3 cut(s)	89, 397, 1124
AsuII	TTCGAA	1 cut(s)	931
BalI	TGGCCA	1 cut(s)	245
BanII	GRGCYC	1 cut(s)	237
BbvCI	CCTCAGC	1 cut(s)	345
BbvI	GCAGC	2 cut(s)	1048, 1070
BccI	CCATC	6 cut(s)	68, 74, 190, 260, 1109, 1256
BceAI	ACGGC	1 cut(s)	157
BciT130I	CCWGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
BclI	TGATCA	2 cut(s)	838, 862
BcoDI	GTCTC	2 cut(s)	742, 993
BfaI	CTAG	7 cut(s)	11, 225, 549, 606, 710, 852, 1272
BfmI	CTRYAG	1 cut(s)	475
BfuAI	ACCTGC	1 cut(s)	65
BisI	GCNGC	2 cut(s)	1059, 1062
BlsI	GCNGC	2 cut(s)	1060, 1063
Bme1390I	CCNGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
BmgT120I	GGNCC	2 cut(s)	1069, 1245
BmiI	GGNNCC	2 cut(s)	301, 1070
BmrFI	CCNGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
BmrI	ACTGGG	1 cut(s)	439
BmsI	GCATC	4 cut(s)	16, 599, 816, 904
BmuI	ACTGGG	1 cut(s)	439
BplI	GAGNNNNNCTC	2 cut(s)	990, 1022
Bpu10I	CCTNAGC	1 cut(s)	345
Bpu14I	TTCGAA	1 cut(s)	931
Bsa29I	ATCGAT	1 cut(s)	810
BsaBI	GATNNNNATC	2 cut(s)	613, 867
BsaJI	CCNNGG	5 cut(s)	96, 229, 295, 585, 757
Bsc4I	CCNNNNNNNGG	3 cut(s)	252, 697, 1254
Bse118I	RCCGGY	1 cut(s)	937
Bse1I	ACTGG	3 cut(s)	161, 434, 896
Bse8I	GATNNNNATC	2 cut(s)	613, 867
BseBI	CCWGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
BseCI	ATCGAT	1 cut(s)	810
BseDI	CCNNGG	5 cut(s)	96, 229, 295, 585, 757
BseGI	GGATG	3 cut(s)	60, 750, 906
BseJI	GATNNNNATC	2 cut(s)	613, 867
BseLI	CCNNNNNNNGG	3 cut(s)	252, 697, 1254
BseMII	CTCAG	5 cut(s)	200, 336, 752, 1124, 1238
BseNI	ACTGG	3 cut(s)	161, 434, 896
BseRI	GAGGAG	2 cut(s)	1065, 1068
BseXI	GCAGC	2 cut(s)	1048, 1070
BseYI	CCCAGC	1 cut(s)	1064
BshFI	GGCC	6 cut(s)	245, 280, 350, 584, 1071, 1247
BshVI	ATCGAT	1 cut(s)	810
BsiSI	CCGG	1 cut(s)	938
BslFI	GGGAC	1 cut(s)	1128
BslI	CCNNNNNNNGG	3 cut(s)	252, 697, 1254
BsmAI	GTCTC	2 cut(s)	742, 993
BsmFI	GGGAC	1 cut(s)	1128
BsnI	GGCC	6 cut(s)	245, 280, 350, 584, 1071, 1247
Bsp119I	TTCGAA	1 cut(s)	931
Bsp1286I	GDGCHC	1 cut(s)	237
Bsp143I	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
Bsp19I	CCATGG	1 cut(s)	229
BspACI	CCGC	1 cut(s)	43
BspANI	GGCC	6 cut(s)	245, 280, 350, 584, 1071, 1247
BspCNI	CTCAG	5 cut(s)	199, 337, 751, 1125, 1237
BspDI	ATCGAT	1 cut(s)	810
BspLI	GGNNCC	2 cut(s)	301, 1070
BspMI	ACCTGC	1 cut(s)	65
BspPI	GGATC	3 cut(s)	34, 614, 968
BspQI	GCTCTTC	1 cut(s)	1013
BspT104I	TTCGAA	1 cut(s)	931
BsrFI	RCCGGY	1 cut(s)	937
BsrI	ACTGG	3 cut(s)	161, 434, 896
BssAI	RCCGGY	1 cut(s)	937
BssECI	CCNNGG	5 cut(s)	96, 229, 295, 585, 757
BssMI	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
BssT1I	CCWWGG	1 cut(s)	229
Bst2UI	CCWGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
Bst4CI	ACNGT	5 cut(s)	241, 523, 637, 823, 1018
Bst6I	CTCTTC	4 cut(s)	288, 1013, 1042, 1042
BstBI	TTCGAA	1 cut(s)	931
BstC8I	GCNNGC	2 cut(s)	1269, 1286
BstDEI	CTNAG	5 cut(s)	186, 345, 738, 1133, 1224
BstDSI	CCRYGG	1 cut(s)	229
BstF5I	GGATG	3 cut(s)	60, 750, 906
BstKTI	GATC	6 cut(s)	42, 622, 841, 865, 976, 1194
BstMAI	GTCTC	2 cut(s)	742, 993
BstMBI	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
BstMWI	GCNNNNNNNGC	1 cut(s)	150
BstNI	CCWGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
BstSCI	CCNGG	7 cut(s)	95, 295, 584, 757, 802, 976, 1208
BstSFI	CTRYAG	1 cut(s)	475
BstV1I	GCAGC	2 cut(s)	1048, 1070
BstX2I	RGATCY	2 cut(s)	619, 973
BstYI	RGATCY	2 cut(s)	619, 973
Bsu15I	ATCGAT	1 cut(s)	810
BsuRI	GGCC	6 cut(s)	245, 280, 350, 584, 1071, 1247
BsuTUI	ATCGAT	1 cut(s)	810
BtgI	CCRYGG	1 cut(s)	229
BtsCI	GGATG	3 cut(s)	60, 750, 906
BtsIMutI	CAGTG	4 cut(s)	246, 268, 1014, 1089
BveI	ACCTGC	1 cut(s)	65
Cac8I	GCNNGC	2 cut(s)	1269, 1286
CaiI	CAGNNNCTG	2 cut(s)	454, 1064
Cfr10I	RCCGGY	1 cut(s)	937
Cfr13I	GGNCC	2 cut(s)	1069, 1245
ClaI	ATCGAT	1 cut(s)	810
Csp6I	GTAC	3 cut(s)	193, 451, 1120
CviAII	CATG	5 cut(s)	65, 230, 512, 668, 1099
CviQI	GTAC	3 cut(s)	193, 451, 1120
DdeI	CTNAG	5 cut(s)	186, 345, 738, 1133, 1224
DpnI	GATC	6 cut(s)	41, 621, 840, 864, 975, 1193
DpnII	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
EaeI	YGGCCR	1 cut(s)	243
Eam1104I	CTCTTC	4 cut(s)	288, 1013, 1042, 1042
EarI	CTCTTC	4 cut(s)	288, 1013, 1042, 1042
EciI	GGCGGA	1 cut(s)	32
Eco130I	CCWWGG	1 cut(s)	229
Eco147I	AGGCCT	1 cut(s)	280
Eco24I	GRGCYC	1 cut(s)	237
Eco57I	CTGAAG	3 cut(s)	609, 1023, 1113
EcoO109I	RGGNCCY	1 cut(s)	1069
EcoRII	CCWGG	7 cut(s)	95, 295, 584, 757, 802, 976, 1208
EcoT14I	CCWWGG	1 cut(s)	229
EcoT38I	GRGCYC	1 cut(s)	237
ErhI	CCWWGG	1 cut(s)	229
FaeI	CATG	5 cut(s)	68, 233, 515, 671, 1102
FaqI	GGGAC	1 cut(s)	1128
FatI	CATG	5 cut(s)	64, 229, 511, 667, 1098
FbaI	TGATCA	2 cut(s)	838, 862
Fnu4HI	GCNGC	2 cut(s)	1059, 1062
FokI	GGATG	3 cut(s)	47, 757, 893
FriOI	GRGCYC	1 cut(s)	237
Fsp4HI	GCNGC	2 cut(s)	1059, 1062
FspBI	CTAG	7 cut(s)	11, 225, 549, 606, 710, 852, 1272
GluI	GCNGC	2 cut(s)	1059, 1062
GsaI	CCCAGC	1 cut(s)	1068
HaeIII	GGCC	6 cut(s)	245, 280, 350, 584, 1071, 1247
HapII	CCGG	1 cut(s)	938
Hin1II	CATG	5 cut(s)	68, 233, 515, 671, 1102
HindIII	AAGCTT	1 cut(s)	379
HinfI	GANTC	4 cut(s)	750, 799, 1103, 1141
HpaII	CCGG	1 cut(s)	938
HphI	GGTGA	3 cut(s)	89, 397, 1124
Hpy166II	GTNNAC	3 cut(s)	388, 427, 826
Hpy188III	TCNNGA	6 cut(s)	215, 627, 710, 836, 883, 1195
Hpy8I	GTNNAC	3 cut(s)	388, 427, 826
HpyAV	CCTTC	7 cut(s)	348, 405, 624, 633, 707, 1088, 1248
HpyCH4III	ACNGT	5 cut(s)	241, 523, 637, 823, 1018
HpyCH4V	TGCA	7 cut(s)	106, 137, 612, 788, 818, 917, 1154
HpyF10VI	GCNNNNNNNGC	1 cut(s)	150
HpyF3I	CTNAG	5 cut(s)	186, 345, 738, 1133, 1224
Hsp92II	CATG	5 cut(s)	68, 233, 515, 671, 1102
Ksp22I	TGATCA	2 cut(s)	838, 862
Kzo9I	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
LguI	GCTCTTC	1 cut(s)	1013
LmnI	GCTCC	3 cut(s)	305, 589, 1055
Lsp1109I	GCAGC	2 cut(s)	1048, 1070
LweI	GCATC	4 cut(s)	16, 599, 816, 904
MaeI	CTAG	7 cut(s)	11, 225, 549, 606, 710, 852, 1272
MaeIII	GTNAC	3 cut(s)	272, 497, 514
MalI	GATC	6 cut(s)	41, 621, 840, 864, 975, 1193
MboI	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
MboII	GAAGA	6 cut(s)	275, 920, 1000, 1029, 1059, 1210
MflI	RGATCY	2 cut(s)	619, 973
MhlI	GDGCHC	1 cut(s)	237
MlsI	TGGCCA	1 cut(s)	245
MluCI	AATT	4 cut(s)	576, 953, 1161, 1297
MluNI	TGGCCA	1 cut(s)	245
MlyI	GAGTC	3 cut(s)	744, 1097, 1150
MmeI	TCCRAC	1 cut(s)	309
Mox20I	TGGCCA	1 cut(s)	245
MscI	TGGCCA	1 cut(s)	245
MseI	TTAA	4 cut(s)	366, 377, 492, 528
Msp20I	TGGCCA	1 cut(s)	245
MspA1I	CMGCKG	1 cut(s)	1061
MspI	CCGG	1 cut(s)	938
MspR9I	CCNGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
MvaI	CCWGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
MwoI	GCNNNNNNNGC	1 cut(s)	150
NcoI	CCATGG	1 cut(s)	229
NdeII	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
NlaIII	CATG	5 cut(s)	68, 233, 515, 671, 1102
NlaIV	GGNNCC	2 cut(s)	301, 1070
NspV	TTCGAA	1 cut(s)	931
PaqCI	CACCTGC	1 cut(s)	65
PceI	AGGCCT	1 cut(s)	280
PciSI	GCTCTTC	1 cut(s)	1013
PfeI	GAWTC	1 cut(s)	799
PflMI	CCANNNNNTGG	2 cut(s)	252, 697
PkrI	GCNGC	2 cut(s)	1060, 1063
PleI	GAGTC	3 cut(s)	744, 1097, 1149
PpsI	GAGTC	3 cut(s)	744, 1097, 1149
Psp6I	CCWGG	7 cut(s)	95, 295, 584, 757, 802, 976, 1208
PspFI	CCCAGC	1 cut(s)	1064
PspGI	CCWGG	7 cut(s)	95, 295, 584, 757, 802, 976, 1208
PspN4I	GGNNCC	2 cut(s)	301, 1070
PspPI	GGNCC	2 cut(s)	1069, 1245
PsrI	GAACNNNNNNTAC	2 cut(s)	507, 539
PstNI	CAGNNNCTG	2 cut(s)	454, 1064
PsuI	RGATCY	2 cut(s)	619, 973
PvuII	CAGCTG	1 cut(s)	1061
RsaI	GTAC	3 cut(s)	194, 452, 1121
RsaNI	GTAC	3 cut(s)	193, 451, 1120
SapI	GCTCTTC	1 cut(s)	1013
SaqAI	TTAA	4 cut(s)	366, 377, 492, 528
SatI	GCNGC	2 cut(s)	1059, 1062
Sau3AI	GATC	6 cut(s)	39, 619, 838, 862, 973, 1191
Sau96I	GGNCC	2 cut(s)	1069, 1245
SchI	GAGTC	3 cut(s)	744, 1097, 1150
ScrFI	CCNGG	7 cut(s)	97, 297, 586, 759, 804, 978, 1210
SduI	GDGCHC	1 cut(s)	237
SfaNI	GCATC	4 cut(s)	16, 599, 816, 904
SfcI	CTRYAG	1 cut(s)	475
SfuI	TTCGAA	1 cut(s)	931
Sse9I	AATT	4 cut(s)	576, 953, 1161, 1297
SseBI	AGGCCT	1 cut(s)	280
SsiI	CCGC	1 cut(s)	43
SspMI	CTAG	7 cut(s)	11, 225, 549, 606, 710, 852, 1272
StuI	AGGCCT	1 cut(s)	280
StyD4I	CCNGG	7 cut(s)	95, 295, 584, 757, 802, 976, 1208
StyI	CCWWGG	1 cut(s)	229
TaaI	ACNGT	5 cut(s)	241, 523, 637, 823, 1018
TaqI	TCGA	3 cut(s)	810, 897, 931
TasI	AATT	4 cut(s)	576, 953, 1161, 1297
TfiI	GAWTC	1 cut(s)	799
Tru1I	TTAA	4 cut(s)	366, 377, 492, 528
Tru9I	TTAA	4 cut(s)	366, 377, 492, 528
TscAI	CASTG	4 cut(s)	246, 268, 1021, 1096
TseI	GCWGC	2 cut(s)	1058, 1061
TspDTI	ATGAA	6 cut(s)	17, 76, 192, 545, 615, 934
TspRI	CASTG	4 cut(s)	246, 268, 1021, 1096
Van91I	CCANNNNNTGG	2 cut(s)	252, 697
XapI	RAATTY	1 cut(s)	953
XbaI	TCTAGA	1 cut(s)	709
XspI	CTAG	7 cut(s)	11, 225, 549, 606, 710, 852, 1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.