Prupe.7G164200_v2.0.a1

N-terminal region of micro-spherule protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0010517
Physical Location & Seq
Forward (+)
16891624 .. 16897473
5850 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G164200.3

Sequence Viewer

Length: 2466 bp
ATGGAAGCAGCGGCCTCGGCTCCTCCTTGGATCCCTGAAGACGACCTTCGCTTGAAGAAGGCCATGGAGGCAGGTGCTTCTCTGGAAGCACTTGCCAAAGGAGCTGTGCGATTTTCGCGCAAGTTCTCGGTCCGGGAATTGCGAGAGCGGTGGTCCTCGCTCCTCTACGATGCCGATATCTCGGCCGAGGCCTCGTCTCGGATGCTGGAAGTCGAAGGTTGCAATTCCAGCGCAGCGTTCAAGTCTAGTAGAGTCGGCAGTTCTAGGGATTCAAAGCGAAAAGGCGAAAGCATACGCAAACACTACTATGCTATGCAGAAGAAACTCCGCACTTCTAATTCCGTTGATCCTTACTCTTATCACAAAAAATTTTTCGATCCCAATTTTCTGTTCGCGCCACACCTTGATAATGGCAAGGCTTTAGAGGAAAATTTTGGGGTTGGAGATCATAATCAACCCTTGTTTATGGATTGCAATGGCAATGAGAGCAATGCTGAGGATGCATTTCGTGCTGGAGAGTGTGTCTCAATTGGAAATCATGGTGTGGAGGGAGTTGTGAGGGAAGGGTGCCCTAATGTATTTGTGGAACAGGTTTCATTATTGCCGAATGGATTAGGAGATGATTCTTTTTTCCACGATCCTGCTTGTGAAGATTTGCCTACTCAGGGAGATGATTTAATTGATTTTGCAAATGTGGAAGATATAGGGCCATCGCATGCATCGACAGATGAGCCTCTTTGGAAAACGATTGAGGATGTACCAGCACCAGAAATGCCAATTGATGTGAGCCTCGGGGTTAATGGTGAGGATGCCAAAAAGACATTGGTAGTTCCTGATGATGCGGATGGTGGTTCATCTCAATATGAAGTTGTCCATTCTGAGGCAATGTTGAATGATAGAGAAGTTTGCGATGAACTGAATAGGTCTGTAACAATCTCCGGAGGTGATTATGCAGATATATACCTTACGAATGAGGATGAGCTCACCTTCATGGATGTAAATGGAAAGGAGTCAATGGATAAGTCCTCTTATGAAAGCCTGAAGCCGATTCCGTTGAGTTCTCCCAAAGATGTTCATGAATATGTTGTGCCTGATCCTTGTCAACCTCAAAAGTTGATTTCAGACTCATTCCAGGATGTTTCACACAATGTGCATACTGCCAAGATGCCCGACTCTTGTCTACCACAAAATTTGATTTCAGAAACATGCCAGGATGTTTCAGACAATGTGCATGCTGCCGAGATGGATGTTTCCGCTAAACCGTCTCACTCTCTGCATGACGAGCAGCGTGATATTTCTTCTGCTGAAGCCAATAATCCATCATCTACATCAGTGCCAAATCCTCTTACTCCTGAACTTCGTGAGAAAGAGATGATTTGCACATTGAATACCGAGGATCCTGAAATCCCATGCAATGATGATATATTTCCACCTACTGGAACAGTTCATGCTGTAGTGCAGCCAACCTTAAAAGAAGCTAGTGGGTTAGCGTCCTCTACTGGCAAAAGAAAATGTGATCAACAAACAATAACCTTGACAAAAGAAGAAGATCCTGCACAACCTTTTAAGGTTCCTCGGATGGTAGGACATGACACAATTACAGAAAACAGCCCCAACCATGCACTTGTTTCTTTTGGAATTAAAGCTGCATATGGTGATAGTAACGGTCTAGCTTCAGTCTCCAAACATGATAAAAATGTCCCCGCCAACCCAAGCCAATGCAGATCAGCACATCAACCTCCTAAGTCTATCCCAAATCGAGTGCTAAAAGAAGAGGGAATAGTTGCTCCATCTACAGTTGCAGAACTTGCACCCGTAATCACAGAGCCAGGTTCTACTAAAATGACTTTTCTAGAACCAGAAGCCAACCCCTCAGCACTAGACTGTGAAGAATCTGAGGAAGAATCTGAGGACGATGTTGATGATGATGATGCTGACATTCCCTATTTTTCTGATATTGAACAGATGATACTTGAGATGGATTTATGTCCAGATGATCAGGATTCATATTTCAGTAAAATAGCCTCAGCATATCAAGATGAGGATTCTAAAAGGCATATCATGAGATTAGAACAGTGTGCACGATCCTCTATGCAAAGAGACCTTGCATCTAAAGGTGCACTTGCTGTATTGTATGGTCGCCATGTAAAGGAATATATTAAGAAAACTGAGGTAATACTTGGCCGGGCAACAGAAGATAATGAAGTTGATATTGATTTGGGAAAGGAAGGGCTACACAACAAAATATCTAGACGGCAGGCCGTGATAAAGATGGAAGGAGATGGTTCTTTCTCTTTGAAGAATCTTGGCAAGGGTTCAATTTTTTTGAACGGCAAAGAAGTTACTATTGGACAGCTTGTTAGCCTTAGTTCAAGTAACTTGATTGAGATTAGGGAAATGGCCTTTGTCTTTGAGATAAATCACAAATACACCAAGTTTGAATGGTCGCCTGGGAGAGGTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000228 GO:0000785 GO:0000790 GO:0002151 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0004857 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005844 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008187 GO:0008266 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010521 GO:0010556 GO:0010558 GO:0010605 GO:0010639 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016579 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030234 GO:0030425 GO:0031011 GO:0031248 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0033202 GO:0034046 GO:0034708 GO:0035097 GO:0036211 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043086 GO:0043170 GO:0043204 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0043982 GO:0043984 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044297 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044463 GO:0044464 GO:0044665 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051276 GO:0051338 GO:0051348 GO:0051972 GO:0051974 GO:0060255 GO:0060341 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070603 GO:0070646 GO:0070647 GO:0070717 GO:0071339 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0097346 GO:0097447 GO:0097458 GO:0098772 GO:0120025 GO:0120038 GO:1900180 GO:1900182 GO:1901363 GO:1901564 GO:1902493 GO:1902494 GO:1903827 GO:1903829 GO:1904356 GO:1904357 GO:1904749 GO:1904751 GO:1904949 GO:1990234 GO:1990904 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251
KEGG Pathways
Metabolic & Signaling
ko05168 map05168
Pfam Domains
Protein Families
FHA MCRS_N

Protein Analysis

822

Amino Acids

90.18

Weight (kDa)

4.67

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 62
Acc36I ACCTGC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 567
AccB7I CCANNNNNTGG 1 cut(s) 1436
AccBSI CCGCTC 1 cut(s) 148
AccI GTMKAC 1 cut(s) 1180
AccII CGCG 2 cut(s) 118, 395
AccIII TCCGGA 1 cut(s) 938
AciI CCGC 6 cut(s) 11, 148, 328, 842, 1254, 1704
AcoI YGGCCR 2 cut(s) 183, 2182
AcsI RAATTY 3 cut(s) 368, 430, 1189
AcuI CTGAAG 4 cut(s) 57, 1061, 1326, 1659
AdeI CACNNNGTG 1 cut(s) 1150
AfaI GTAC 1 cut(s) 759
AfiI CCNNNNNNNGG 6 cut(s) 198, 665, 880, 1436, 2149, 2456
AjnI CCWGG 4 cut(s) 1131, 1209, 1828, 2449
AjuI GAANNNNNNNTTGG 4 cut(s) 374, 406, 2331, 2363
AluBI AGCT 6 cut(s) 104, 982, 1478, 1646, 1673, 2356
AluI AGCT 6 cut(s) 104, 982, 1478, 1646, 1673, 2356
Alw21I GWGCWC 3 cut(s) 984, 2083, 2122
Alw26I GTCTC 5 cut(s) 201, 529, 1269, 1684, 2094
Alw44I GTGCAC 2 cut(s) 2079, 2118
Ama87I CYCGRG 1 cut(s) 791
Aor13HI TCCGGA 1 cut(s) 938
AoxI GGCC 8 cut(s) 12, 60, 183, 189, 707, 2182, 2259, 2400
ApaLI GTGCAC 2 cut(s) 2079, 2118
ApeKI GCWGC 6 cut(s) 8, 233, 1235, 1285, 1459, 1646
ApoI RAATTY 3 cut(s) 368, 430, 1189
AspLEI GCGC 3 cut(s) 120, 233, 397
AspS9I GGNCC 4 cut(s) 130, 153, 707, 2459
AsuC2I CCSGG 2 cut(s) 134, 2186
AsuHPI GGTGA 4 cut(s) 815, 956, 976, 1667
AvaI CYCGRG 1 cut(s) 791
AvaII GGWCC 3 cut(s) 130, 153, 2459
BaeGI GKGCMC 3 cut(s) 572, 2083, 2122
BamHI GGATCC 2 cut(s) 30, 1396
BanI GGYRCC 1 cut(s) 567
BanII GRGCYC 1 cut(s) 984
BbsI GAAGAC 1 cut(s) 45
Bbv12I GWGCWC 3 cut(s) 984, 2083, 2122
BbvCI CCTCAGC 3 cut(s) 495, 1873, 2026
BbvI GCAGC 6 cut(s) 20, 245, 1222, 1297, 1471, 1633
BccI CCATC 9 cut(s) 718, 839, 1237, 1327, 1573, 1798, 1972, 2266, 2276
BceAI ACGGC 3 cut(s) 2246, 2270, 2347
BcgI CGANNNNNNTGC 1 cut(s) 31
BciT130I CCWGG 4 cut(s) 1133, 1211, 1830, 2451
BclI TGATCA 2 cut(s) 1516, 1996
BcnI CCSGG 2 cut(s) 134, 2186
BcoDI GTCTC 5 cut(s) 201, 529, 1269, 1684, 2094
BfaI CTAG 7 cut(s) 246, 264, 1479, 1670, 1853, 1880, 2250
BfmI CTRYAG 2 cut(s) 1452, 1794
BfuAI ACCTGC 1 cut(s) 62
BglI GCCNNNNNGGC 1 cut(s) 68
BisI GCNGC 7 cut(s) 9, 12, 234, 1236, 1286, 1460, 1647
BlsI GCNGC 7 cut(s) 10, 13, 235, 1237, 1287, 1461, 1648
Bme1390I CCNGG 6 cut(s) 134, 1133, 1211, 1830, 2186, 2451
Bme18I GGWCC 3 cut(s) 130, 153, 2459
BmeT110I CYCGRG 1 cut(s) 791
BmgT120I GGNCC 4 cut(s) 130, 153, 707, 2459
BmiI GGNNCC 5 cut(s) 21, 32, 569, 1398, 1572
BmrFI CCNGG 6 cut(s) 134, 1133, 1211, 1830, 2186, 2451
BmsI GCATC 9 cut(s) 160, 192, 490, 728, 799, 829, 1155, 1921, 2117
BoxI GACNNNNGTC 1 cut(s) 1176
BpiI GAAGAC 1 cut(s) 45
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpmI CTGGAG 1 cut(s) 534
Bpu10I CCTNAGC 3 cut(s) 495, 1873, 2026
BpuEI CTTGAG 1 cut(s) 1994
BpuMI CCSGG 2 cut(s) 134, 2186
BsaBI GATNNNNATC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 2094
BsaJI CCNNGG 8 cut(s) 15, 26, 63, 186, 790, 1392, 1574, 2450
BsaWI WCCGGW 1 cut(s) 938
BsaXI ACNNNNNCTCC 2 cut(s) 507, 537
Bsc4I CCNNNNNNNGG 6 cut(s) 198, 665, 880, 1436, 2149, 2456
Bse1I ACTGG 2 cut(s) 1441, 1504
Bse3DI GCAATG 5 cut(s) 481, 487, 496, 891, 1420
Bse8I GATNNNNATC 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 938
BseBI CCWGG 4 cut(s) 1133, 1211, 1830, 2451
BseDI CCNNGG 8 cut(s) 15, 26, 63, 186, 790, 1392, 1574, 2450
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 6 cut(s) 198, 665, 880, 1436, 2149, 2456
BseMI GCAATG 5 cut(s) 481, 487, 496, 891, 1420
BseMII CTCAG 8 cut(s) 486, 677, 870, 1887, 1887, 1899, 2040, 2160
BseNI ACTGG 2 cut(s) 1441, 1504
BseRI GAGGAG 2 cut(s) 12, 152
BseSI GKGCMC 3 cut(s) 572, 2083, 2122
BseX3I CGGCCG 1 cut(s) 183
BseXI GCAGC 6 cut(s) 20, 245, 1222, 1297, 1471, 1633
BsgI GTGCAG 2 cut(s) 1478, 1539
Bsh1236I CGCG 2 cut(s) 118, 395
Bsh1285I CGRYCG 1 cut(s) 186
BshFI GGCC 8 cut(s) 14, 62, 185, 191, 709, 2184, 2261, 2402
BshNI GGYRCC 1 cut(s) 567
BsiEI CGRYCG 1 cut(s) 186
BsiHKAI GWGCWC 3 cut(s) 984, 2083, 2122
BsiHKCI CYCGRG 1 cut(s) 791
BsiSI CCGG 3 cut(s) 133, 939, 2185
BslFI GGGAC 1 cut(s) 1685
BslI CCNNNNNNNGG 6 cut(s) 198, 665, 880, 1436, 2149, 2456
BsmAI GTCTC 5 cut(s) 201, 529, 1269, 1684, 2094
BsmBI CGTCTC 2 cut(s) 201, 1269
BsmFI GGGAC 1 cut(s) 1685
BsnI GGCC 8 cut(s) 14, 62, 185, 191, 709, 2184, 2261, 2402
Bso31I GGTCTC 1 cut(s) 2094
BsoBI CYCGRG 1 cut(s) 791
Bsp1286I GDGCHC 4 cut(s) 572, 984, 2083, 2122
Bsp13I TCCGGA 1 cut(s) 938
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 6 cut(s) 11, 148, 328, 842, 1254, 1704
BspANI GGCC 8 cut(s) 14, 62, 185, 191, 709, 2184, 2261, 2402
BspCNI CTCAG 8 cut(s) 487, 676, 871, 1886, 1888, 1900, 2039, 2161
BspEI TCCGGA 1 cut(s) 938
BspFNI CGCG 2 cut(s) 118, 395
BspHI TCATGA 2 cut(s) 1075, 2061
BspLI GGNNCC 5 cut(s) 21, 32, 569, 1398, 1572
BspMI ACCTGC 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 567
BspTNI GGTCTC 1 cut(s) 2094
BsrBI CCGCTC 1 cut(s) 148
BsrDI GCAATG 5 cut(s) 481, 487, 496, 891, 1420
BsrI ACTGG 2 cut(s) 1441, 1504
BssECI CCNNGG 8 cut(s) 15, 26, 63, 186, 790, 1392, 1574, 2450
BssT1I CCWWGG 2 cut(s) 26, 63
Bst2UI CCWGG 4 cut(s) 1133, 1211, 1830, 2451
Bst4CI ACNGT 6 cut(s) 1263, 1444, 1667, 1798, 1886, 2076
Bst6I CTCTTC 1 cut(s) 1767
BstAPI GCANNNNNTGC 2 cut(s) 509, 1808
BstC8I GCNNGC 3 cut(s) 717, 1233, 2259
BstDSI CCRYGG 1 cut(s) 63
BstENI CCTNNNNNAGG 1 cut(s) 2454
BstFNI CGCG 2 cut(s) 118, 395
BstHHI GCGC 3 cut(s) 120, 233, 397
BstMAI GTCTC 5 cut(s) 201, 529, 1269, 1684, 2094
BstMCI CGRYCG 1 cut(s) 186
BstNI CCWGG 4 cut(s) 1133, 1211, 1830, 2451
BstNSI RCATGY 3 cut(s) 719, 1209, 1235
BstPAI GACNNNNGTC 1 cut(s) 1176
BstSCI CCNGG 6 cut(s) 132, 1131, 1209, 1828, 2184, 2449
BstSFI CTRYAG 2 cut(s) 1452, 1794
BstSLI GKGCMC 3 cut(s) 572, 2083, 2122
BstUI CGCG 2 cut(s) 118, 395
BstV1I GCAGC 6 cut(s) 20, 245, 1222, 1297, 1471, 1633
BstV2I GAAGAC 1 cut(s) 45
BstX2I RGATCY 3 cut(s) 30, 1396, 1549
BstYI RGATCY 3 cut(s) 30, 1396, 1549
BstZI CGGCCG 1 cut(s) 183
BsuRI GGCC 8 cut(s) 14, 62, 185, 191, 709, 2184, 2261, 2402
BtgI CCRYGG 1 cut(s) 63
BtgZI GCGATG 2 cut(s) 696, 924
BtsIMutI CAGTG 2 cut(s) 1338, 2081
BveI ACCTGC 1 cut(s) 62
Cac8I GCNNGC 3 cut(s) 717, 1233, 2259
CciI TCATGA 2 cut(s) 1075, 2061
CfoI GCGC 3 cut(s) 120, 233, 397
Cfr13I GGNCC 4 cut(s) 130, 153, 707, 2459
CpoI CGGWCCG 1 cut(s) 130
CseI GACGC 1 cut(s) 1479
Csp6I GTAC 1 cut(s) 758
CspCI CAANNNNNGTGG 2 cut(s) 1173, 1208
CspI CGGWCCG 1 cut(s) 130
CviQI GTAC 1 cut(s) 758
DraIII CACNNNGTG 1 cut(s) 1150
EaeI YGGCCR 2 cut(s) 183, 2182
EagI CGGCCG 1 cut(s) 183
Eam1104I CTCTTC 1 cut(s) 1767
EarI CTCTTC 1 cut(s) 1767
Ecl136II GAGCTC 1 cut(s) 982
EclXI CGGCCG 1 cut(s) 183
Eco130I CCWWGG 2 cut(s) 26, 63
Eco147I AGGCCT 1 cut(s) 191
Eco24I GRGCYC 1 cut(s) 984
Eco31I GGTCTC 1 cut(s) 2094
Eco32I GATATC 1 cut(s) 178
Eco47I GGWCC 3 cut(s) 130, 153, 2459
Eco52I CGGCCG 1 cut(s) 183
Eco53kI GAGCTC 1 cut(s) 982
Eco57I CTGAAG 4 cut(s) 57, 1061, 1326, 1659
Eco88I CYCGRG 1 cut(s) 791
EcoICRI GAGCTC 1 cut(s) 982
EcoNI CCTNNNNNAGG 1 cut(s) 2454
EcoRII CCWGG 4 cut(s) 1131, 1209, 1828, 2449
EcoRV GATATC 1 cut(s) 178
EcoT14I CCWWGG 2 cut(s) 26, 63
EcoT22I ATGCAT 2 cut(s) 505, 721
EcoT38I GRGCYC 1 cut(s) 984
ErhI CCWWGG 2 cut(s) 26, 63
Esp3I CGTCTC 2 cut(s) 201, 1269
FalI AAGNNNNNCTT 4 cut(s) 30, 62, 2106, 2138
FaqI GGGAC 1 cut(s) 1685
FauI CCCGC 1 cut(s) 1711
FauNDI CATATG 1 cut(s) 1651
FbaI TGATCA 2 cut(s) 1516, 1996
FblI GTMKAC 1 cut(s) 1180
Fnu4HI GCNGC 7 cut(s) 9, 12, 234, 1236, 1286, 1460, 1647
FriOI GRGCYC 1 cut(s) 984
Fsp4HI GCNGC 7 cut(s) 9, 12, 234, 1236, 1286, 1460, 1647
FspBI CTAG 7 cut(s) 246, 264, 1479, 1670, 1853, 1880, 2250
GlaI GCGC 3 cut(s) 119, 232, 396
GluI GCNGC 7 cut(s) 9, 12, 234, 1236, 1286, 1460, 1647
GsuI CTGGAG 1 cut(s) 534
HaeIII GGCC 8 cut(s) 14, 62, 185, 191, 709, 2184, 2261, 2402
HapII CCGG 3 cut(s) 133, 939, 2185
HgaI GACGC 1 cut(s) 1479
HhaI GCGC 3 cut(s) 120, 233, 397
Hin6I GCGC 3 cut(s) 118, 231, 395
HinP1I GCGC 3 cut(s) 118, 231, 395
HincII GTYRAC 1 cut(s) 1103
HindII GTYRAC 1 cut(s) 1103
HpaII CCGG 3 cut(s) 133, 939, 2185
HphI GGTGA 4 cut(s) 815, 956, 976, 1667
Hpy166II GTNNAC 4 cut(s) 1103, 1181, 2081, 2120
Hpy188I TCNGA 9 cut(s) 201, 880, 1123, 1201, 1222, 1578, 1897, 1909, 1954
Hpy8I GTNNAC 4 cut(s) 1103, 1181, 2081, 2120
HpyAV CCTTC 7 cut(s) 52, 56, 209, 557, 997, 2222, 2270
HpyCH4III ACNGT 6 cut(s) 1263, 1444, 1667, 1798, 1886, 2076
HspAI GCGC 3 cut(s) 118, 231, 395
Kpn2I TCCGGA 1 cut(s) 938
Ksp22I TGATCA 2 cut(s) 1516, 1996
LmnI GCTCC 4 cut(s) 25, 101, 165, 1792
Lsp1109I GCAGC 6 cut(s) 20, 245, 1222, 1297, 1471, 1633
LweI GCATC 9 cut(s) 160, 192, 490, 728, 799, 829, 1155, 1921, 2117
MaeI CTAG 7 cut(s) 246, 264, 1479, 1670, 1853, 1880, 2250
MaeIII GTNAC 4 cut(s) 928, 1661, 2341, 2375
MbiI CCGCTC 1 cut(s) 148
MfeI CAATTG 2 cut(s) 528, 777
MflI RGATCY 3 cut(s) 30, 1396, 1549
MhlI GDGCHC 4 cut(s) 572, 984, 2083, 2122
MlyI GAGTC 4 cut(s) 261, 1019, 1118, 1166
MmeI TCCRAC 1 cut(s) 421
Mph1103I ATGCAT 2 cut(s) 505, 721
MroI TCCGGA 1 cut(s) 938
MseI TTAA 6 cut(s) 677, 798, 1469, 1566, 1641, 2160
MslI CAYNNNNRTG 3 cut(s) 306, 989, 1080
MspA1I CMGCKG 1 cut(s) 11
MspI CCGG 3 cut(s) 133, 939, 2185
MspR9I CCNGG 6 cut(s) 134, 1133, 1211, 1830, 2186, 2451
MunI CAATTG 2 cut(s) 528, 777
MvaI CCWGG 4 cut(s) 1133, 1211, 1830, 2451
MvnI CGCG 2 cut(s) 118, 395
NciI CCSGG 2 cut(s) 134, 2186
NcoI CCATGG 1 cut(s) 63
NdeI CATATG 1 cut(s) 1651
NlaIV GGNNCC 5 cut(s) 21, 32, 569, 1398, 1572
NmeAIII GCCGAG 3 cut(s) 161, 211, 1264
NsiI ATGCAT 2 cut(s) 505, 721
NspI RCATGY 3 cut(s) 719, 1209, 1235
PaeI GCATGC 2 cut(s) 719, 1235
PagI TCATGA 2 cut(s) 1075, 2061
PaqCI CACCTGC 1 cut(s) 62
PceI AGGCCT 1 cut(s) 191
PcsI WCGNNNNNNNCGW 1 cut(s) 719
PfeI GAWTC 8 cut(s) 269, 623, 1048, 1892, 1904, 2003, 2045, 2302
PflMI CCANNNNNTGG 1 cut(s) 1436
PfoI TCCNGGA 2 cut(s) 132, 1131
PkrI GCNGC 7 cut(s) 10, 13, 235, 1237, 1287, 1461, 1648
PleI GAGTC 4 cut(s) 260, 1018, 1118, 1166
PpsI GAGTC 4 cut(s) 260, 1018, 1118, 1166
PshAI GACNNNNGTC 1 cut(s) 1176
Psp124BI GAGCTC 1 cut(s) 984
Psp6I CCWGG 4 cut(s) 1131, 1209, 1828, 2449
PspGI CCWGG 4 cut(s) 1131, 1209, 1828, 2449
PspN4I GGNNCC 5 cut(s) 21, 32, 569, 1398, 1572
PspPI GGNCC 4 cut(s) 130, 153, 707, 2459
PsrI GAACNNNNNNTAC 2 cut(s) 1953, 1985
PsuI RGATCY 3 cut(s) 30, 1396, 1549
RsaI GTAC 1 cut(s) 759
RsaNI GTAC 1 cut(s) 758
RseI CAYNNNNRTG 3 cut(s) 306, 989, 1080
Rsr2I CGGWCCG 1 cut(s) 130
RsrII CGGWCCG 1 cut(s) 130
SacI GAGCTC 1 cut(s) 984
SaqAI TTAA 6 cut(s) 677, 798, 1469, 1566, 1641, 2160
SatI GCNGC 7 cut(s) 9, 12, 234, 1236, 1286, 1460, 1647
Sau96I GGNCC 4 cut(s) 130, 153, 707, 2459
SchI GAGTC 4 cut(s) 261, 1019, 1118, 1166
ScrFI CCNGG 6 cut(s) 134, 1133, 1211, 1830, 2186, 2451
SduI GDGCHC 4 cut(s) 572, 984, 2083, 2122
SfaNI GCATC 9 cut(s) 160, 192, 490, 728, 799, 829, 1155, 1921, 2117
SfcI CTRYAG 2 cut(s) 1452, 1794
SinI GGWCC 3 cut(s) 130, 153, 2459
SmiMI CAYNNNNRTG 3 cut(s) 306, 989, 1080
SmlI CTYRAG 1 cut(s) 1973
SmoI CTYRAG 1 cut(s) 1973
SphI GCATGC 2 cut(s) 719, 1235
SseBI AGGCCT 1 cut(s) 191
SsiI CCGC 6 cut(s) 11, 148, 328, 842, 1254, 1704
SspMI CTAG 7 cut(s) 246, 264, 1479, 1670, 1853, 1880, 2250
SstI GAGCTC 1 cut(s) 984
StuI AGGCCT 1 cut(s) 191
StyD4I CCNGG 6 cut(s) 132, 1131, 1209, 1828, 2184, 2449
StyI CCWWGG 2 cut(s) 26, 63
TaaI ACNGT 6 cut(s) 1263, 1444, 1667, 1798, 1886, 2076
TaqI TCGA 4 cut(s) 213, 375, 722, 1759
TaqII GACCGA 1 cut(s) 118
TauI GCSGC 1 cut(s) 14
TfiI GAWTC 8 cut(s) 269, 623, 1048, 1892, 1904, 2003, 2045, 2302
Tru1I TTAA 6 cut(s) 677, 798, 1469, 1566, 1641, 2160
Tru9I TTAA 6 cut(s) 677, 798, 1469, 1566, 1641, 2160
TscAI CASTG 2 cut(s) 1338, 2081
TseI GCWGC 6 cut(s) 8, 233, 1235, 1285, 1459, 1646
TspGWI ACGGA 2 cut(s) 331, 1041
TspRI CASTG 2 cut(s) 1338, 2081
Van91I CCANNNNNTGG 1 cut(s) 1436
VneI GTGCAC 2 cut(s) 2079, 2118
VpaK11BI GGWCC 3 cut(s) 130, 153, 2459
XagI CCTNNNNNAGG 1 cut(s) 2454
XapI RAATTY 3 cut(s) 368, 430, 1189
XbaI TCTAGA 2 cut(s) 1852, 2249
XceI RCATGY 3 cut(s) 719, 1209, 1235
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XmiI GTMKAC 1 cut(s) 1180
XspI CTAG 7 cut(s) 246, 264, 1479, 1670, 1853, 1880, 2250
Zsp2I ATGCAT 2 cut(s) 505, 721
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.