Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011245

Physical Location & Seq

Genomic Coordinates Forward (+)

17558775 .. 17563979

Gene Structure 5205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G177700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGACGATCGTGAACGTGTGCCGCTCCTTACCAGGATCGTCGTGTCGACCATTGGACCGATGCTACCGCTTTCTTCCTTGTCTCTCCGATCCCGCTCGGAGGTCGGCCTTGGGTTTAAAAGTTGCATTGGTGATGCTACATCTGATATATGTGGGCATGCTTTTTCTGTTTGACGGAGGATTGATAGAGAAAACTAAAAGAGAACCATGGTATACTGCTATCTATTTGACTCTCTTTGTTGCCACATTGGTCCAATACTTTGTTACTTCTGCTTCTTCTCCTGGCTTTGTCCTTGATGCAATGAGGGCAGTCAATGAGTCAAATACAATTTTCAGAAAGGCATTAGTAGCCTCAAAACAGCCTGCTTCAAGCAAAAATGGAAACGTGGTTGTGACAGTGGAAGGGAGTCAGATGGCAAGAAGTCTTCTTGGAAGTAATGCAACATCTTGGACCAAACTTGTGATGGACTTGTATCCCCCGGGAACTTCTGTTCGAAGTTTGACTTGCTCGTACTGTAATGTTGAGCAGCCTCCCAGATCCAAGCACTGTCATGATTGTGACAAATGTGTTCTCCAATTCGATCATCATTGTGTTTGGCTTGGAACATGCATTGGTCTGGGTAATCATTGTAAATTTTGGTGGTACATTTGTGAAGAGACATCATTGTGCCTTTGGACTGGCATCATGTACATCACATATCTGAAGGAAAATATATCAAGTGCTTGGTGGAAGGATGCTATTGTGATATTGCTGTTGGTTACTTTGTCAATTTCCATTATCTTTCTGCTTCTCCTGCTGCTATTTCACAGTTATCTTGTTCTGACCAATCAGACTACCTATGAGCTTGTAAGACGGAGGCGCATCCCATATTTAAGAGGAGTTCCCGAAAGAGTTTACCCTTTCAGTAAAGGAGCATGCAGAAATTTATACGAGTTTTGCTGTCTTCGAAGCAGTAAATACCGAATGGAACGATTACCCACAGCTCAGGAACTTGAAGAAAAGTCTAGACCTTACTCCATTTGTGATGTTGTAACCTGTCGTTGTTGTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009628 GO:0009651 GO:0009705 GO:0016020 GO:0031090 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048731 GO:0048856 GO:0050896 GO:0098588 GO:0098805 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHHC

Protein Analysis

351

Amino Acids

39.89

Weight (kDa)

8.95

Isoelectric Point (pI)

46.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51390 AT3G51390
fragaria_vesca	FvH4_1g10780 FvH4_6g14950
malus_domestica	MD02G1121800.v1.1 MD15G1235400.v1.1
prunus_persica	Prupe.7G177700_v2.0.a1 Prupe.7G177700_v2.0.a1
pyrus_communis	pycom02g09470 pycom15g20960
rosa_chinensis	RchiOBHm_Chr2g0097961
rosa_laevigata	RLG00000016746
rosa_multiflora	Rmu_sc0009572.1_g000004
rosa_roxburghii	Rroxscaffold_2G00144420
rosa_rugosa	Rorug02G0069300
rosa_samantha	Rh2AG116300 Rh2BG119200 Rh2CG120800 Rh2DG120500
rosa_wichuraiana	Rw2G009100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	24, 95
AccI	GTMKAC	2 cut(s)	46, 212
AciI	CCGC	3 cut(s)	22, 67, 93
AclWI	GGATC	3 cut(s)	43, 83, 531
AcsI	RAATTY	2 cut(s)	632, 922
AcuI	CTGAAG	1 cut(s)	722
AfaI	GTAC	3 cut(s)	512, 644, 689
AfiI	CCNNNNNNNGG	1 cut(s)	99
AflIII	ACRYGT	1 cut(s)	15
AgsI	TTSAA	2 cut(s)	369, 995
AjnI	CCWGG	2 cut(s)	31, 280
AloI	GAACNNNNNNTCC	2 cut(s)	474, 506
AluBI	AGCT	2 cut(s)	844, 983
AluI	AGCT	2 cut(s)	844, 983
Alw26I	GTCTC	2 cut(s)	86, 650
AlwI	GGATC	3 cut(s)	43, 83, 531
Ama87I	CYCGRG	1 cut(s)	478
AoxI	GGCC	1 cut(s)	105
ApeKI	GCWGC	2 cut(s)	526, 796
ApoI	RAATTY	2 cut(s)	632, 922
AspLEI	GCGC	1 cut(s)	861
AspS9I	GGNCC	3 cut(s)	55, 250, 450
AsuC2I	CCSGG	2 cut(s)	479, 480
AsuHPI	GGTGA	1 cut(s)	142
AsuII	TTCGAA	2 cut(s)	493, 946
AvaI	CYCGRG	1 cut(s)	478
AvaII	GGWCC	3 cut(s)	55, 250, 450
BaeI	ACNNNNGTAYC	2 cut(s)	634, 667
BbsI	GAAGAC	2 cut(s)	416, 935
BbvI	GCAGC	2 cut(s)	538, 783
BccI	CCATC	2 cut(s)	406, 457
BciT130I	CCWGG	2 cut(s)	33, 282
BciVI	GTATCC	1 cut(s)	483
BcnI	CCSGG	2 cut(s)	479, 480
BcoDI	GTCTC	2 cut(s)	86, 650
BfaI	CTAG	1 cut(s)	1005
BfuI	GTATCC	1 cut(s)	483
BisI	GCNGC	3 cut(s)	22, 527, 797
BlsI	GCNGC	3 cut(s)	23, 528, 798
Bme1390I	CCNGG	4 cut(s)	33, 282, 479, 480
Bme18I	GGWCC	3 cut(s)	55, 250, 450
BmeT110I	CYCGRG	1 cut(s)	478
BmgT120I	GGNCC	3 cut(s)	55, 250, 450
BmrFI	CCNGG	4 cut(s)	33, 282, 479, 480
BmsI	GCATC	6 cut(s)	50, 123, 286, 690, 724, 870
BpiI	GAAGAC	2 cut(s)	416, 935
Bpu10I	CCTNAGC	1 cut(s)	984
Bpu14I	TTCGAA	2 cut(s)	493, 946
BpuMI	CCSGG	2 cut(s)	479, 480
BsaJI	CCNNGG	4 cut(s)	108, 206, 477, 478
Bsc4I	CCNNNNNNNGG	1 cut(s)	99
Bse1I	ACTGG	1 cut(s)	682
Bse3DI	GCAATG	1 cut(s)	306
BseBI	CCWGG	2 cut(s)	33, 282
BseDI	CCNNGG	4 cut(s)	108, 206, 477, 478
BseGI	GGATG	2 cut(s)	739, 861
BseLI	CCNNNNNNNGG	1 cut(s)	99
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	1 cut(s)	998
BseNI	ACTGG	1 cut(s)	682
BseRI	GAGGAG	1 cut(s)	891
BseXI	GCAGC	2 cut(s)	538, 783
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	1 cut(s)	107
BsiEI	CGRYCG	1 cut(s)	9
BsiHKCI	CYCGRG	1 cut(s)	478
BsiSI	CCGG	1 cut(s)	479
BslI	CCNNNNNNNGG	1 cut(s)	99
BsmAI	GTCTC	2 cut(s)	86, 650
BsnI	GGCC	1 cut(s)	107
BsoBI	CYCGRG	1 cut(s)	478
Bsp119I	TTCGAA	2 cut(s)	493, 946
Bsp1407I	TGTACA	1 cut(s)	687
Bsp143I	GATC	5 cut(s)	6, 35, 88, 536, 580
Bsp19I	CCATGG	1 cut(s)	206
BspACI	CCGC	3 cut(s)	22, 67, 93
BspANI	GGCC	1 cut(s)	107
BspCNI	CTCAG	1 cut(s)	997
BspHI	TCATGA	1 cut(s)	550
BspPI	GGATC	3 cut(s)	43, 83, 531
BspT104I	TTCGAA	2 cut(s)	493, 946
BsrBI	CCGCTC	2 cut(s)	24, 95
BsrDI	GCAATG	1 cut(s)	306
BsrGI	TGTACA	1 cut(s)	687
BsrI	ACTGG	1 cut(s)	682
BssECI	CCNNGG	4 cut(s)	108, 206, 477, 478
BssMI	GATC	5 cut(s)	6, 35, 88, 536, 580
BssNAI	GTATAC	1 cut(s)	213
BssT1I	CCWWGG	2 cut(s)	108, 206
Bst1107I	GTATAC	1 cut(s)	213
Bst2UI	CCWGG	2 cut(s)	33, 282
Bst4CI	ACNGT	4 cut(s)	397, 515, 548, 809
Bst6I	CTCTTC	1 cut(s)	648
BstAUI	TGTACA	1 cut(s)	687
BstBI	TTCGAA	2 cut(s)	493, 946
BstC8I	GCNNGC	3 cut(s)	158, 363, 916
BstDEI	CTNAG	1 cut(s)	984
BstDSI	CCRYGG	1 cut(s)	206
BstF5I	GGATG	2 cut(s)	739, 861
BstHHI	GCGC	1 cut(s)	861
BstKTI	GATC	5 cut(s)	9, 38, 91, 539, 583
BstMAI	GTCTC	2 cut(s)	86, 650
BstMBI	GATC	5 cut(s)	6, 35, 88, 536, 580
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 347, 793
BstNI	CCWGG	2 cut(s)	33, 282
BstNSI	RCATGY	3 cut(s)	160, 609, 918
BstSCI	CCNGG	4 cut(s)	31, 280, 477, 478
BstV1I	GCAGC	2 cut(s)	538, 783
BstV2I	GAAGAC	2 cut(s)	416, 935
BstX2I	RGATCY	1 cut(s)	536
BstYI	RGATCY	1 cut(s)	536
BstZ17I	GTATAC	1 cut(s)	213
BsuI	GTATCC	1 cut(s)	483
BsuRI	GGCC	1 cut(s)	107
BtgI	CCRYGG	1 cut(s)	206
BtsCI	GGATG	2 cut(s)	739, 861
BtsIMutI	CAGTG	2 cut(s)	402, 544
Cac8I	GCNNGC	3 cut(s)	158, 363, 916
CciI	TCATGA	1 cut(s)	550
CfoI	GCGC	1 cut(s)	861
Cfr13I	GGNCC	3 cut(s)	55, 250, 450
Cfr9I	CCCGGG	1 cut(s)	478
Csp6I	GTAC	3 cut(s)	511, 643, 688
CviAII	CATG	6 cut(s)	157, 207, 551, 606, 685, 915
CviJI	RGCY	8 cut(s)	107, 285, 350, 361, 529, 598, 844, 983
CviKI_1	RGCY	8 cut(s)	107, 285, 350, 361, 529, 598, 844, 983
CviQI	GTAC	3 cut(s)	511, 643, 688
DdeI	CTNAG	1 cut(s)	984
DpnI	GATC	5 cut(s)	8, 37, 90, 538, 582
DpnII	GATC	5 cut(s)	6, 35, 88, 536, 580
DraI	TTTAAA	1 cut(s)	117
Eam1104I	CTCTTC	1 cut(s)	648
EarI	CTCTTC	1 cut(s)	648
Eco130I	CCWWGG	2 cut(s)	108, 206
Eco47I	GGWCC	3 cut(s)	55, 250, 450
Eco57I	CTGAAG	1 cut(s)	722
Eco88I	CYCGRG	1 cut(s)	478
EcoRII	CCWGG	2 cut(s)	31, 280
EcoT14I	CCWWGG	2 cut(s)	108, 206
EcoT22I	ATGCAT	1 cut(s)	611
ErhI	CCWWGG	2 cut(s)	108, 206
FaeI	CATG	6 cut(s)	160, 210, 554, 609, 688, 918
FalI	AAGNNNNNCTT	2 cut(s)	487, 519
FatI	CATG	6 cut(s)	156, 206, 550, 605, 684, 914
FauI	CCCGC	1 cut(s)	100
FblI	GTMKAC	2 cut(s)	46, 212
Fnu4HI	GCNGC	3 cut(s)	22, 527, 797
FokI	GGATG	2 cut(s)	746, 848
Fsp4HI	GCNGC	3 cut(s)	22, 527, 797
FspBI	CTAG	1 cut(s)	1005
GlaI	GCGC	1 cut(s)	860
GluI	GCNGC	3 cut(s)	22, 527, 797
HaeIII	GGCC	1 cut(s)	107
HapII	CCGG	1 cut(s)	479
HhaI	GCGC	1 cut(s)	861
Hin1II	CATG	6 cut(s)	160, 210, 554, 609, 688, 918
Hin6I	GCGC	1 cut(s)	859
HinP1I	GCGC	1 cut(s)	859
HincII	GTYRAC	1 cut(s)	47
HindII	GTYRAC	1 cut(s)	47
HinfI	GANTC	3 cut(s)	229, 317, 406
HpaII	CCGG	1 cut(s)	479
HphI	GGTGA	1 cut(s)	142
Hpy166II	GTNNAC	4 cut(s)	13, 47, 213, 895
Hpy188I	TCNGA	8 cut(s)	88, 99, 144, 335, 411, 702, 822, 831
Hpy188III	TCNNGA	5 cut(s)	10, 551, 884, 986, 1005
Hpy8I	GTNNAC	4 cut(s)	13, 47, 213, 895
Hpy99I	CGWCG	1 cut(s)	43
HpyAV	CCTTC	3 cut(s)	395, 697, 724
HpyCH4III	ACNGT	4 cut(s)	397, 515, 548, 809
HpyCH4IV	ACGT	2 cut(s)	15, 384
HpyCH4V	TGCA	5 cut(s)	125, 299, 440, 609, 918
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 347, 793
HpyF3I	CTNAG	1 cut(s)	984
HpySE526I	ACGT	2 cut(s)	15, 384
Hsp92II	CATG	6 cut(s)	160, 210, 554, 609, 688, 918
HspAI	GCGC	1 cut(s)	859
Kzo9I	GATC	5 cut(s)	6, 35, 88, 536, 580
LmnI	GCTCC	2 cut(s)	29, 911
Lsp1109I	GCAGC	2 cut(s)	538, 783
LweI	GCATC	6 cut(s)	50, 123, 286, 690, 724, 870
MaeI	CTAG	1 cut(s)	1005
MaeII	ACGT	2 cut(s)	15, 384
MaeIII	GTNAC	5 cut(s)	262, 391, 557, 757, 1030
MalI	GATC	5 cut(s)	8, 37, 90, 538, 582
MbiI	CCGCTC	2 cut(s)	24, 95
MboI	GATC	5 cut(s)	6, 35, 88, 536, 580
MboII	GAAGA	6 cut(s)	65, 267, 416, 665, 935, 1007
MflI	RGATCY	1 cut(s)	536
MluCI	AATT	5 cut(s)	327, 575, 632, 768, 922
MlyI	GAGTC	3 cut(s)	223, 326, 415
MnlI	CCTC	7 cut(s)	93, 170, 297, 361, 540, 849, 869
Mph1103I	ATGCAT	1 cut(s)	611
MseI	TTAA	2 cut(s)	116, 872
MslI	CAYNNNNRTG	4 cut(s)	549, 555, 588, 664
MspI	CCGG	1 cut(s)	479
MspR9I	CCNGG	4 cut(s)	33, 282, 479, 480
MvaI	CCWGG	2 cut(s)	33, 282
MwoI	GCNNNNNNNGC	3 cut(s)	305, 347, 793
NciI	CCSGG	2 cut(s)	479, 480
NcoI	CCATGG	1 cut(s)	206
NdeII	GATC	5 cut(s)	6, 35, 88, 536, 580
NlaIII	CATG	6 cut(s)	160, 210, 554, 609, 688, 918
NmuCI	GTSAC	2 cut(s)	391, 557
NsiI	ATGCAT	1 cut(s)	611
NspI	RCATGY	3 cut(s)	160, 609, 918
NspV	TTCGAA	2 cut(s)	493, 946
PaeI	GCATGC	2 cut(s)	160, 918
PagI	TCATGA	1 cut(s)	550
PkrI	GCNGC	3 cut(s)	23, 528, 798
Ple19I	CGATCG	1 cut(s)	9
PleI	GAGTC	3 cut(s)	223, 325, 414
PpsI	GAGTC	3 cut(s)	223, 325, 414
Psp6I	CCWGG	2 cut(s)	31, 280
PspGI	CCWGG	2 cut(s)	31, 280
PspPI	GGNCC	3 cut(s)	55, 250, 450
PsuI	RGATCY	1 cut(s)	536
PvuI	CGATCG	1 cut(s)	9
RsaI	GTAC	3 cut(s)	512, 644, 689
RsaNI	GTAC	3 cut(s)	511, 643, 688
RseI	CAYNNNNRTG	4 cut(s)	549, 555, 588, 664
SalI	GTCGAC	1 cut(s)	45
SaqAI	TTAA	2 cut(s)	116, 872
SatI	GCNGC	3 cut(s)	22, 527, 797
Sau3AI	GATC	5 cut(s)	6, 35, 88, 536, 580
Sau96I	GGNCC	3 cut(s)	55, 250, 450
SchI	GAGTC	3 cut(s)	223, 326, 415
ScrFI	CCNGG	4 cut(s)	33, 282, 479, 480
SetI	ASST	8 cut(s)	18, 104, 387, 839, 846, 985, 1012, 1037
SfaNI	GCATC	6 cut(s)	50, 123, 286, 690, 724, 870
SfuI	TTCGAA	2 cut(s)	493, 946
SinI	GGWCC	3 cut(s)	55, 250, 450
SmaI	CCCGGG	1 cut(s)	480
SmiMI	CAYNNNNRTG	4 cut(s)	549, 555, 588, 664
SphI	GCATGC	2 cut(s)	160, 918
Sse9I	AATT	5 cut(s)	327, 575, 632, 768, 922
SsiI	CCGC	3 cut(s)	22, 67, 93
SspMI	CTAG	1 cut(s)	1005
StyD4I	CCNGG	4 cut(s)	31, 280, 477, 478
StyI	CCWWGG	2 cut(s)	108, 206
TaaI	ACNGT	4 cut(s)	397, 515, 548, 809
TaiI	ACGT	2 cut(s)	18, 387
TaqI	TCGA	4 cut(s)	46, 493, 579, 946
TaqII	GACCGA	1 cut(s)	72
TasI	AATT	5 cut(s)	327, 575, 632, 768, 922
TatI	WGTACW	1 cut(s)	687
TauI	GCSGC	1 cut(s)	24
Tru1I	TTAA	2 cut(s)	116, 872
Tru9I	TTAA	2 cut(s)	116, 872
TscAI	CASTG	2 cut(s)	402, 551
TseFI	GTSAC	2 cut(s)	391, 557
TseI	GCWGC	2 cut(s)	526, 796
Tsp45I	GTSAC	2 cut(s)	391, 557
TspGWI	ACGGA	2 cut(s)	189, 868
TspMI	CCCGGG	1 cut(s)	478
TspRI	CASTG	2 cut(s)	402, 551
VpaK11BI	GGWCC	3 cut(s)	55, 250, 450
XapI	RAATTY	2 cut(s)	632, 922
XbaI	TCTAGA	1 cut(s)	1004
XceI	RCATGY	3 cut(s)	160, 609, 918
XcmI	CCANNNNNNNNNTGG	1 cut(s)	460
XmaI	CCCGGG	1 cut(s)	478
XmiI	GTMKAC	2 cut(s)	46, 212
XspI	CTAG	1 cut(s)	1005
Zsp2I	ATGCAT	1 cut(s)	611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.