Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011798

Physical Location & Seq

Genomic Coordinates Reverse (-)

18963449 .. 18969600

Gene Structure 6152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G205000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGAGAACCATACGCAGATGGAGAAGAACGAGGTGGGGCCCATGGCTATAGAGGCGGAGGAGGAGGCCGGAGAGGTGGGGTCCAGCTTGACCCTGGAGAGGGTGGCTGCAGCCAAGCAGTTCATAGAGAGCCACTACAAGGCTCAGATGAAGCACATCCAAGATCGTAAACAAAGGCGCTCAGTGCTGGAAAAGAAGTTGGCATCTGAACGTGTGCCAGAACAGGAACAGATCCATATGTTGAAGGATTTGGAGCGCACAGAGACTGAATATATGCGCCTTAAAAGGCACAAGATTTGTGTTGATGATTTTGACCTTCTGGCAATAATTGGGAGAGGGGCCTTTGGAGAGGTTAGACTCTGTCGGGAGAAGAAATCTGGCAACATTTATGCCATGAAAAAGTTGAAGAAGTCAGAAATGCTCAGTAGGGGGCAGGTTGAACATGTTAGAGCTGAAAGGAATTTGCTTGCAGAGGTTGCTAGTCACTGCATTGTGAAACTCTACTATTCCTTTCAAGATGCTGACTACTTGTATCTAATCATGGAGTATCTACCTGGTGGTGACATGATGACTTTGCTTATTAGAGAAGAGACTTTGACTGAAACTGTTGCAAGATTTTACATTGCCCAAAGTGTTATGGCTATAGAATCTATTCATAAACATAACTACATTCACAGAGACATAAAACCAGACAATCTTCTGTTAGACAAAAATGGTCACATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCTCAAATTTGTCATCCATAAACGAAAATGAAGTACTAGATGATGAGAACCTACATGAGACAATGGATATTGATGAATCCTTCCCAGAATCCAAAAATGGGAGGCGCTGGAAAAGCCCGCTTGAGCAACTTCAACATTGGCAAATAAACAGAAGAAAACTGGCATTCTCAACAGTCGGAACTCCGGATTACATCGCTCCAGAAGTATTGTTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCACTTGGTGCAATAATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCTGATGATCCAGTGACAACATGCAGAAAGATTGTACATTGGAAAAATCACTTAAAATTTCCAGTGGAAGCAAGGTTGACACCTGAAGCAAAGGATCTGATCAGTAGGTTCCTTTGTGATGTTGAAAATAGGCTTGGTAGAGCAGACCAAATTAAGGCTCATCCTTGGTTCAAAGATATTGCTTGGGACAAACTTTATGAGGTGGAGGCAGCATTTAAACCAGAGGTCAATGGGGAACTCGATACTCAAAATTTTATGAAGTATGATGAGGTGGATCCACCAGCAACAGGAAGAACAGGATCTGGACCAATGAGAAAGATGTTGTTGACTCCTAAAGATCTCAGTTTTGTTGGCTATACATACAAGAATTTTGAGGCTGTCAAAGGGTTACATCAATCTTCTGATCTAAACAGGAGTGCATCACTGAACCGATCATCTATTGACTCTTCTCAAAGTGATTCAGCACTGGACTACTCCACTAGGTATTCATGCAGTGACATGGAAGCTCAGGTGCTTGCTGCATCAGAGGATGTCATGTCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_C

Protein Analysis

534

Amino Acids

61.37

Weight (kDa)

5.68

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19400
fragaria_vesca	FvH4_1g07990 FvH4_1g07990
malus_domestica	MD02G1084400.v1.1 MD15G1211700.v1.1
prunus_persica	Prupe.7G205000_v2.0.a1 Prupe.7G205000_v2.0.a1 Prupe.7G205000_v2.0.a1
pyrus_communis	pycom02g06730 pycom15g18820
rosa_chinensis	RchiOBHm_Chr2g0094031
rosa_laevigata	RLG00000016447
rosa_multiflora	Rmu_ssc0000369.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147540
rosa_rugosa	Rorug02G0040500
rosa_samantha	Rh2AG087900 Rh2BG088100 Rh2CG090400 Rh2DG087100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	424
AccIII	TCCGGA	1 cut(s)	943
AciI	CCGC	2 cut(s)	56, 878
AclWI	GGATC	6 cut(s)	226, 1058, 1158, 1325, 1338, 1363
AcsI	RAATTY	5 cut(s)	460, 766, 1112, 1306, 1423
AcuI	CTGAAG	1 cut(s)	1161
AdeI	CACNNNGTG	1 cut(s)	1013
AfaI	GTAC	2 cut(s)	795, 1092
AfiI	CCNNNNNNNGG	6 cut(s)	99, 100, 139, 858, 1210, 1343
AflIII	ACRYGT	2 cut(s)	211, 442
AgsI	TTSAA	8 cut(s)	244, 406, 440, 515, 893, 973, 1181, 1228
AhdI	GACNNNNNGTC	1 cut(s)	1003
AjnI	CCWGG	2 cut(s)	93, 553
AjuI	GAANNNNNNNTTGG	2 cut(s)	1173, 1205
AluBI	AGCT	4 cut(s)	87, 452, 727, 1562
AluI	AGCT	4 cut(s)	87, 452, 727, 1562
Alw26I	GTCTC	4 cut(s)	257, 584, 672, 812
AlwI	GGATC	6 cut(s)	226, 1058, 1158, 1325, 1338, 1363
AlwNI	CAGNNNCTG	2 cut(s)	266, 1358
Aor13HI	TCCGGA	1 cut(s)	943
AoxI	GGCC	3 cut(s)	38, 66, 339
ApaI	GGGCCC	1 cut(s)	42
ApeKI	GCWGC	4 cut(s)	107, 110, 1265, 1574
ApoI	RAATTY	5 cut(s)	460, 766, 1112, 1306, 1423
Asp700I	GAANNNNTTC	1 cut(s)	651
AspLEI	GCGC	4 cut(s)	180, 258, 279, 867
AspS9I	GGNCC	5 cut(s)	38, 39, 81, 339, 1361
AsuHPI	GGTGA	1 cut(s)	572
AvaII	GGWCC	2 cut(s)	81, 1361
BaeGI	GKGCMC	1 cut(s)	42
BamHI	GGATCC	1 cut(s)	1330
BanII	GRGCYC	1 cut(s)	42
BbvI	GCAGC	4 cut(s)	94, 122, 1277, 1561
BccI	CCATC	1 cut(s)	13
BciT130I	CCWGG	2 cut(s)	95, 555
BclI	TGATCA	1 cut(s)	1155
BcoDI	GTCTC	4 cut(s)	257, 584, 672, 812
BfaI	CTAG	3 cut(s)	480, 797, 1536
BfmI	CTRYAG	3 cut(s)	48, 108, 642
BfoI	RGCGCY	2 cut(s)	181, 868
BfuAI	ACCTGC	1 cut(s)	424
BglII	AGATCT	1 cut(s)	1393
BisI	GCNGC	4 cut(s)	108, 111, 1266, 1575
BlsI	GCNGC	4 cut(s)	109, 112, 1267, 1576
BmcAI	AGTACT	1 cut(s)	795
Bme1390I	CCNGG	2 cut(s)	95, 555
Bme18I	GGWCC	2 cut(s)	81, 1361
BmeRI	GACNNNNNGTC	1 cut(s)	1003
BmgT120I	GGNCC	5 cut(s)	38, 39, 81, 339, 1361
BmiI	GGNNCC	6 cut(s)	39, 40, 82, 340, 1166, 1332
BmrFI	CCNGG	2 cut(s)	95, 555
BmsI	GCATC	5 cut(s)	212, 508, 1020, 1484, 1586
BpmI	CTGGAG	2 cut(s)	116, 942
Bpu10I	CCTNAGC	1 cut(s)	1563
BpuEI	CTTGAG	1 cut(s)	902
BsaJI	CCNNGG	3 cut(s)	42, 93, 1220
BsaWI	WCCGGW	1 cut(s)	943
Bsc4I	CCNNNNNNNGG	6 cut(s)	99, 100, 139, 858, 1210, 1343
Bse1I	ACTGG	5 cut(s)	924, 1004, 1067, 1118, 1527
Bse3DI	GCAATG	1 cut(s)	621
BseAI	TCCGGA	1 cut(s)	943
BseBI	CCWGG	2 cut(s)	95, 555
BseDI	CCNNGG	3 cut(s)	42, 93, 1220
BseGI	GGATG	4 cut(s)	156, 773, 1216, 1591
BseLI	CCNNNNNNNGG	6 cut(s)	99, 100, 139, 858, 1210, 1343
BseMI	GCAATG	1 cut(s)	621
BseMII	CTCAG	5 cut(s)	158, 195, 436, 1411, 1577
BseNI	ACTGG	5 cut(s)	924, 1004, 1067, 1118, 1527
BseRI	GAGGAG	2 cut(s)	74, 77
BseSI	GKGCMC	1 cut(s)	42
BseXI	GCAGC	4 cut(s)	94, 122, 1277, 1561
BshFI	GGCC	3 cut(s)	40, 68, 341
BsiSI	CCGG	2 cut(s)	69, 944
BslFI	GGGAC	1 cut(s)	1256
BslI	CCNNNNNNNGG	6 cut(s)	99, 100, 139, 858, 1210, 1343
BsmAI	GTCTC	4 cut(s)	257, 584, 672, 812
BsmFI	GGGAC	1 cut(s)	1256
BsmI	GAATGC	1 cut(s)	923
BsnI	GGCC	3 cut(s)	40, 68, 341
Bsp120I	GGGCCC	1 cut(s)	38
Bsp1286I	GDGCHC	1 cut(s)	42
Bsp13I	TCCGGA	1 cut(s)	943
Bsp1407I	TGTACA	1 cut(s)	1090
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	2 cut(s)	56, 878
BspANI	GGCC	3 cut(s)	40, 68, 341
BspCNI	CTCAG	5 cut(s)	157, 194, 435, 1410, 1576
BspEI	TCCGGA	1 cut(s)	943
BspLI	GGNNCC	6 cut(s)	39, 40, 82, 340, 1166, 1332
BspMAI	CTGCAG	1 cut(s)	112
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	6 cut(s)	226, 1058, 1158, 1325, 1338, 1363
BsrDI	GCAATG	1 cut(s)	621
BsrGI	TGTACA	1 cut(s)	1090
BsrI	ACTGG	5 cut(s)	924, 1004, 1067, 1118, 1527
BssECI	CCNNGG	3 cut(s)	42, 93, 1220
BssT1I	CCWWGG	2 cut(s)	42, 1220
Bst2UI	CCWGG	2 cut(s)	95, 555
Bst4CI	ACNGT	2 cut(s)	607, 934
Bst6I	CTCTTC	2 cut(s)	582, 1507
BstAPI	GCANNNNNTGC	1 cut(s)	476
BstAUI	TGTACA	1 cut(s)	1090
BstC8I	GCNNGC	4 cut(s)	468, 749, 878, 1572
BstDEI	CTNAG	5 cut(s)	144, 181, 422, 1397, 1563
BstDSI	CCRYGG	1 cut(s)	42
BstF5I	GGATG	4 cut(s)	156, 773, 1216, 1591
BstH2I	RGCGCY	2 cut(s)	181, 868
BstHHI	GCGC	4 cut(s)	180, 258, 279, 867
BstMAI	GTCTC	4 cut(s)	257, 584, 672, 812
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 184, 476, 873
BstNI	CCWGG	2 cut(s)	95, 555
BstNSI	RCATGY	2 cut(s)	446, 1080
BstSCI	CCNGG	2 cut(s)	93, 553
BstSFI	CTRYAG	3 cut(s)	48, 108, 642
BstSLI	GKGCMC	1 cut(s)	42
BstV1I	GCAGC	4 cut(s)	94, 122, 1277, 1561
BstX2I	RGATCY	5 cut(s)	231, 1150, 1330, 1355, 1393
BstYI	RGATCY	5 cut(s)	231, 1150, 1330, 1355, 1393
BsuRI	GGCC	3 cut(s)	40, 68, 341
BtgI	CCRYGG	1 cut(s)	42
BtgZI	GCGATG	1 cut(s)	937
BtsCI	GGATG	4 cut(s)	156, 773, 1216, 1591
BtsI	GCAGTG	2 cut(s)	484, 1555
BtsIMutI	CAGTG	7 cut(s)	189, 484, 1074, 1125, 1478, 1520, 1555
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	4 cut(s)	468, 749, 878, 1572
CaiI	CAGNNNCTG	2 cut(s)	266, 1358
CfoI	GCGC	4 cut(s)	180, 258, 279, 867
Cfr13I	GGNCC	5 cut(s)	38, 39, 81, 339, 1361
CsiI	ACCWGGT	1 cut(s)	553
Csp6I	GTAC	2 cut(s)	794, 1091
CviQI	GTAC	2 cut(s)	794, 1091
DdeI	CTNAG	5 cut(s)	144, 181, 422, 1397, 1563
DraI	TTTAAA	1 cut(s)	1273
DraIII	CACNNNGTG	1 cut(s)	1013
DriI	GACNNNNNGTC	1 cut(s)	1003
Eam1104I	CTCTTC	2 cut(s)	582, 1507
Eam1105I	GACNNNNNGTC	1 cut(s)	1003
EarI	CTCTTC	2 cut(s)	582, 1507
EciI	GGCGGA	1 cut(s)	71
Eco130I	CCWWGG	2 cut(s)	42, 1220
Eco24I	GRGCYC	1 cut(s)	42
Eco47I	GGWCC	2 cut(s)	81, 1361
Eco57I	CTGAAG	1 cut(s)	1161
EcoO109I	RGGNCCY	2 cut(s)	38, 339
EcoRII	CCWGG	2 cut(s)	93, 553
EcoT14I	CCWWGG	2 cut(s)	42, 1220
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	2 cut(s)	42, 1220
FaqI	GGGAC	1 cut(s)	1256
FauI	CCCGC	1 cut(s)	885
FauNDI	CATATG	1 cut(s)	237
FbaI	TGATCA	1 cut(s)	1155
Fnu4HI	GCNGC	4 cut(s)	108, 111, 1266, 1575
FokI	GGATG	4 cut(s)	143, 760, 1203, 1598
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	4 cut(s)	108, 111, 1266, 1575
FspBI	CTAG	3 cut(s)	480, 797, 1536
GlaI	GCGC	4 cut(s)	179, 257, 278, 866
GluI	GCNGC	4 cut(s)	108, 111, 1266, 1575
GsuI	CTGGAG	2 cut(s)	116, 942
HaeII	RGCGCY	2 cut(s)	181, 868
HaeIII	GGCC	3 cut(s)	40, 68, 341
HapII	CCGG	2 cut(s)	69, 944
HhaI	GCGC	4 cut(s)	180, 258, 279, 867
Hin6I	GCGC	4 cut(s)	178, 256, 277, 865
HinP1I	GCGC	4 cut(s)	178, 256, 277, 865
HincII	GTYRAC	2 cut(s)	1134, 1383
HindII	GTYRAC	2 cut(s)	1134, 1383
HinfI	GANTC	7 cut(s)	357, 647, 836, 848, 1384, 1499, 1514
HpaII	CCGG	2 cut(s)	69, 944
HphI	GGTGA	1 cut(s)	572
Hpy166II	GTNNAC	3 cut(s)	170, 1134, 1383
Hpy188III	TCNNGA	6 cut(s)	365, 515, 755, 944, 959, 1359
Hpy8I	GTNNAC	3 cut(s)	170, 1134, 1383
HpyAV	CCTTC	3 cut(s)	238, 326, 850
HpyCH4III	ACNGT	2 cut(s)	607, 934
HpyCH4IV	ACGT	1 cut(s)	211
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 184, 476, 873
HpyF3I	CTNAG	5 cut(s)	144, 181, 422, 1397, 1563
HpySE526I	ACGT	1 cut(s)	211
HspAI	GCGC	4 cut(s)	178, 256, 277, 865
Kpn2I	TCCGGA	1 cut(s)	943
Ksp22I	TGATCA	1 cut(s)	1155
LmnI	GCTCC	2 cut(s)	253, 961
Lsp1109I	GCAGC	4 cut(s)	94, 122, 1277, 1561
LweI	GCATC	5 cut(s)	212, 508, 1020, 1484, 1586
MabI	ACCWGGT	1 cut(s)	553
MaeI	CTAG	3 cut(s)	480, 797, 1536
MaeII	ACGT	1 cut(s)	211
MaeIII	GTNAC	8 cut(s)	482, 560, 716, 995, 1005, 1069, 1443, 1550
MflI	RGATCY	5 cut(s)	231, 1150, 1330, 1355, 1393
MhlI	GDGCHC	1 cut(s)	42
MluCI	AATT	7 cut(s)	327, 460, 766, 1112, 1206, 1306, 1423
MlyI	GAGTC	3 cut(s)	351, 1378, 1493
MmeI	TCCRAC	1 cut(s)	916
MroI	TCCGGA	1 cut(s)	943
MroXI	GAANNNNTTC	1 cut(s)	651
MseI	TTAA	4 cut(s)	282, 1109, 1209, 1272
MspI	CCGG	2 cut(s)	69, 944
MspR9I	CCNGG	2 cut(s)	95, 555
Mva1269I	GAATGC	1 cut(s)	923
MvaI	CCWGG	2 cut(s)	95, 555
MwoI	GCNNNNNNNGC	4 cut(s)	53, 184, 476, 873
NcoI	CCATGG	1 cut(s)	42
NdeI	CATATG	1 cut(s)	237
NlaIV	GGNNCC	6 cut(s)	39, 40, 82, 340, 1166, 1332
NmuCI	GTSAC	7 cut(s)	482, 560, 716, 995, 1005, 1069, 1550
NspI	RCATGY	2 cut(s)	446, 1080
PciI	ACATGT	1 cut(s)	442
PctI	GAATGC	1 cut(s)	923
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	4 cut(s)	647, 836, 848, 1514
PflFI	GACNNNGTC	1 cut(s)	360
PkrI	GCNGC	4 cut(s)	109, 112, 1267, 1576
PleI	GAGTC	3 cut(s)	351, 1378, 1493
PpsI	GAGTC	3 cut(s)	351, 1378, 1493
PscI	ACATGT	1 cut(s)	442
Psp6I	CCWGG	2 cut(s)	93, 553
PspGI	CCWGG	2 cut(s)	93, 553
PspN4I	GGNNCC	6 cut(s)	39, 40, 82, 340, 1166, 1332
PspOMI	GGGCCC	1 cut(s)	38
PspPI	GGNCC	5 cut(s)	38, 39, 81, 339, 1361
PstI	CTGCAG	1 cut(s)	112
PstNI	CAGNNNCTG	2 cut(s)	266, 1358
PsuI	RGATCY	5 cut(s)	231, 1150, 1330, 1355, 1393
PsyI	GACNNNGTC	1 cut(s)	360
RsaI	GTAC	2 cut(s)	795, 1092
RsaNI	GTAC	2 cut(s)	794, 1091
SaqAI	TTAA	4 cut(s)	282, 1109, 1209, 1272
SatI	GCNGC	4 cut(s)	108, 111, 1266, 1575
Sau96I	GGNCC	5 cut(s)	38, 39, 81, 339, 1361
ScaI	AGTACT	1 cut(s)	795
SchI	GAGTC	3 cut(s)	351, 1378, 1493
ScrFI	CCNGG	2 cut(s)	95, 555
SduI	GDGCHC	1 cut(s)	42
SexAI	ACCWGGT	1 cut(s)	553
SfaNI	GCATC	5 cut(s)	212, 508, 1020, 1484, 1586
SfcI	CTRYAG	3 cut(s)	48, 108, 642
SinI	GGWCC	2 cut(s)	81, 1361
SmlI	CTYRAG	1 cut(s)	881
SmoI	CTYRAG	1 cut(s)	881
Sse9I	AATT	7 cut(s)	327, 460, 766, 1112, 1206, 1306, 1423
SsiI	CCGC	2 cut(s)	56, 878
SspMI	CTAG	3 cut(s)	480, 797, 1536
StyD4I	CCNGG	2 cut(s)	93, 553
StyI	CCWWGG	2 cut(s)	42, 1220
TaaI	ACNGT	2 cut(s)	607, 934
TaiI	ACGT	1 cut(s)	214
TaqI	TCGA	1 cut(s)	1296
TasI	AATT	7 cut(s)	327, 460, 766, 1112, 1206, 1306, 1423
TatI	WGTACW	2 cut(s)	793, 1090
TfiI	GAWTC	4 cut(s)	647, 836, 848, 1514
Tru1I	TTAA	4 cut(s)	282, 1109, 1209, 1272
Tru9I	TTAA	4 cut(s)	282, 1109, 1209, 1272
TscAI	CASTG	7 cut(s)	189, 491, 1074, 1125, 1485, 1527, 1555
TseFI	GTSAC	7 cut(s)	482, 560, 716, 995, 1005, 1069, 1550
TseI	GCWGC	4 cut(s)	107, 110, 1265, 1574
Tsp45I	GTSAC	7 cut(s)	482, 560, 716, 995, 1005, 1069, 1550
TspDTI	ATGAA	9 cut(s)	112, 164, 410, 644, 737, 804, 849, 1328, 1533
TspRI	CASTG	7 cut(s)	189, 491, 1074, 1125, 1485, 1527, 1555
Tth111I	GACNNNGTC	1 cut(s)	360
VpaK11BI	GGWCC	2 cut(s)	81, 1361
XapI	RAATTY	5 cut(s)	460, 766, 1112, 1306, 1423
XceI	RCATGY	2 cut(s)	446, 1080
XcmI	CCANNNNNNNNNTGG	1 cut(s)	91
XmnI	GAANNNNTTC	1 cut(s)	651
XspI	CTAG	3 cut(s)	480, 797, 1536
ZrmI	AGTACT	1 cut(s)	795

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.