Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009543

Physical Location & Seq

Genomic Coordinates Reverse (-)

19598547 .. 19601520

Gene Structure 2974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G217100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGAAGATCGAGGAATTGGAGGAGGCGGAGTGTGATTGGAGCGACGGCGTTTCCGGGAGGCAGATAGTTAGGGTTGATGACGCCAAGAGAGCGCTAGTCGGAGCCGGGGCTCGGATCCTTTTCTACCCGACCCTGTTATATAATGTGCTTCGGAACAAGATCGAAGCTGAGTTCAGATGGTGGGACGAAGTTGACCAGTTTGTTCTGCTCGGTGCGGTTCCATTCCCCAAAGATGTTCCCCAGTTGAAGCGACTGGGTGTTGGCGGTGTTATCACTCTCAATGAACCTTATGAAACTTTGGTTCCAACGTCCTTGTATCGTGCCCATGGAATTGACCATCTGGTAATCCCAACACGTGATTATCTCTTTGCTCCTTCATTTGAAGATATTAGCAGGGCTGTGGAATTCATTCACTTAAATGCATCTTGTGGTAGAACTACTTATGTTCACTGTAAAGCTGGTCGGGGAAGGAGCACAACTATCGTGCTTTGCTATTTGGTGAAACACAAGAACATGACACCTTCTGCAGCCCTGGACTATGTGCGCTCTAGAAGACCTCGCGTGCTGCTGGCCCCCTCACAGTGGAATGCTGTTCAAGAATATAGCAGATGTAAGCCAGCTACCACAGCATGTTCTCCGTCAGGAGATGCAGTTCTAATTACCAAAGCTGATCTTGAAGGCTATCATGGCACGTGTGACGATAATGCTTGTAAGCAGTTGGCAATAGTTCCTAAAATGGTGAAAGCCAGTCCCATGATAGCTAGGTTATCCTGCCTTTTTGCATCTCTGAAAGTTTCTGGCAGTTGTGGACCAGTCACAAGGCGGTTGACTGTGCCAGAGCCACGTGCTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002791 GO:0002792 GO:0003674 GO:0003824 GO:0004439 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006629 GO:0006644 GO:0006650 GO:0006655 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0008962 GO:0009058 GO:0009987 GO:0010646 GO:0010648 GO:0010817 GO:0016020 GO:0016021 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019866 GO:0023051 GO:0023057 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031304 GO:0031305 GO:0031966 GO:0031967 GO:0031975 GO:0032048 GO:0032049 GO:0032592 GO:0032879 GO:0032880 GO:0034593 GO:0034595 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045017 GO:0046471 GO:0046474 GO:0046486 GO:0046676 GO:0046883 GO:0046888 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050708 GO:0050709 GO:0050789 GO:0050794 GO:0050796 GO:0051046 GO:0051048 GO:0051049 GO:0051051 GO:0051223 GO:0051224 GO:0052866 GO:0060341 GO:0061178 GO:0061179 GO:0065007 GO:0065008 GO:0070201 GO:0071704 GO:0090087 GO:0090276 GO:0090278 GO:0090407 GO:0098573 GO:0106019 GO:1901576 GO:1903530 GO:1903531 GO:1904950

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DSPc

Protein Analysis

285

Amino Acids

31.48

Weight (kDa)

8.72

Isoelectric Point (pI)

58.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56610 AT5G56610
fragaria_vesca	FvH4_1g06520 FvH4_1g06520 FvH4_1g06520
malus_domestica	MD02G1068600.v1.1 MD15G1200100.v1.1
prunus_persica	Prupe.7G217100_v2.0.a1 Prupe.7G217100_v2.0.a1
pyrus_communis	pycom02g05430 pycom15g17760
rosa_chinensis	RchiOBHm_Chr2g0092271
rosa_laevigata	RLG00000016292
rosa_multiflora	Rmu_sc0003289.1_g000030
rosa_roxburghii	Rroxscaffold_2G00149310
rosa_rugosa	Rorug02G0024200 Rorug02G0024300
rosa_samantha	Rh2AG070200 Rh2BG069700 Rh2CG070900 Rh2DG068700
rosa_wichuraiana	Rw2G006210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	561
AciI	CCGC	4 cut(s)	26, 215, 264, 823
AclWI	GGATC	2 cut(s)	109, 122
AcsI	RAATTY	1 cut(s)	404
AcvI	CACGTG	3 cut(s)	356, 693, 845
AcyI	GRCGYC	1 cut(s)	81
AfeI	AGCGCT	1 cut(s)	93
AfiI	CCNNNNNNNGG	2 cut(s)	111, 582
AflIII	ACRYGT	2 cut(s)	353, 692
AgsI	TTSAA	4 cut(s)	247, 383, 596, 677
AjnI	CCWGG	1 cut(s)	531
AloI	GAACNNNNNNTCC	2 cut(s)	636, 668
AluBI	AGCT	5 cut(s)	167, 458, 620, 668, 761
AluI	AGCT	5 cut(s)	167, 458, 620, 668, 761
Alw21I	GWGCWC	1 cut(s)	476
AlwI	GGATC	2 cut(s)	109, 122
Aor51HI	AGCGCT	1 cut(s)	93
AoxI	GGCC	1 cut(s)	570
ApeKI	GCWGC	2 cut(s)	527, 565
ApoI	RAATTY	1 cut(s)	404
Asp700I	GAANNNNTTC	1 cut(s)	408
AspLEI	GCGC	2 cut(s)	94, 546
AspS9I	GGNCC	2 cut(s)	571, 809
AsuC2I	CCSGG	2 cut(s)	55, 106
AsuHPI	GGTGA	2 cut(s)	511, 751
AvaII	GGWCC	1 cut(s)	809
BaeGI	GKGCMC	1 cut(s)	325
BamHI	GGATCC	1 cut(s)	114
BanII	GRGCYC	1 cut(s)	112
BbrPI	CACGTG	3 cut(s)	356, 693, 845
BbsI	GAAGAC	1 cut(s)	559
Bbv12I	GWGCWC	1 cut(s)	476
BbvI	GCAGC	2 cut(s)	539, 552
BccI	CCATC	2 cut(s)	171, 345
BceAI	ACGGC	1 cut(s)	61
BcgI	CGANNNNNNTGC	2 cut(s)	463, 497
BciT130I	CCWGG	1 cut(s)	533
BcnI	CCSGG	2 cut(s)	55, 106
BfaI	CTAG	3 cut(s)	95, 549, 762
BfmI	CTRYAG	1 cut(s)	525
BfoI	RGCGCY	1 cut(s)	95
BisI	GCNGC	2 cut(s)	528, 566
BlsI	GCNGC	2 cut(s)	529, 567
Bme1390I	CCNGG	3 cut(s)	55, 106, 533
Bme18I	GGWCC	1 cut(s)	809
BmgT120I	GGNCC	2 cut(s)	571, 809
BmiI	GGNNCC	5 cut(s)	103, 116, 219, 303, 573
BmrFI	CCNGG	3 cut(s)	55, 106, 533
BmrI	ACTGGG	2 cut(s)	235, 263
BmsI	GCATC	3 cut(s)	431, 637, 791
BmuI	ACTGGG	2 cut(s)	235, 263
BpiI	GAAGAC	1 cut(s)	559
BpuMI	CCSGG	2 cut(s)	55, 106
BsaAI	YACGTR	3 cut(s)	356, 693, 845
BsaHI	GRCGYC	1 cut(s)	81
BsaJI	CCNNGG	3 cut(s)	105, 325, 531
BsaXI	ACNNNNNCTCC	4 cut(s)	14, 44, 636, 666
Bsc4I	CCNNNNNNNGG	2 cut(s)	111, 582
Bse1I	ACTGG	5 cut(s)	196, 241, 258, 747, 812
BseBI	CCWGG	1 cut(s)	533
BseDI	CCNNGG	3 cut(s)	105, 325, 531
BseLI	CCNNNNNNNGG	2 cut(s)	111, 582
BseMII	CTCAG	1 cut(s)	159
BseNI	ACTGG	5 cut(s)	196, 241, 258, 747, 812
BseRI	GAGGAG	1 cut(s)	35
BseSI	GKGCMC	1 cut(s)	325
BseXI	GCAGC	2 cut(s)	539, 552
Bsh1236I	CGCG	1 cut(s)	561
BshFI	GGCC	1 cut(s)	572
BsiHKAI	GWGCWC	1 cut(s)	476
BsiSI	CCGG	2 cut(s)	54, 105
BslFI	GGGAC	2 cut(s)	197, 735
BslI	CCNNNNNNNGG	2 cut(s)	111, 582
BsmFI	GGGAC	2 cut(s)	197, 735
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	1 cut(s)	572
Bsp1286I	GDGCHC	3 cut(s)	112, 325, 476
Bsp143I	GATC	4 cut(s)	6, 114, 159, 670
Bsp19I	CCATGG	1 cut(s)	325
BspACI	CCGC	4 cut(s)	26, 215, 264, 823
BspANI	GGCC	1 cut(s)	572
BspCNI	CTCAG	1 cut(s)	160
BspFNI	CGCG	1 cut(s)	561
BspLI	GGNNCC	5 cut(s)	103, 116, 219, 303, 573
BspMAI	CTGCAG	1 cut(s)	529
BspPI	GGATC	2 cut(s)	109, 122
BsrI	ACTGG	5 cut(s)	196, 241, 258, 747, 812
BssECI	CCNNGG	3 cut(s)	105, 325, 531
BssMI	GATC	4 cut(s)	6, 114, 159, 670
BssNI	GRCGYC	1 cut(s)	81
BssT1I	CCWWGG	1 cut(s)	325
Bst2UI	CCWGG	1 cut(s)	533
Bst4CI	ACNGT	3 cut(s)	452, 582, 832
BstACI	GRCGYC	1 cut(s)	81
BstBAI	YACGTR	3 cut(s)	356, 693, 845
BstC8I	GCNNGC	4 cut(s)	563, 570, 618, 850
BstDEI	CTNAG	1 cut(s)	168
BstDSI	CCRYGG	1 cut(s)	325
BstFNI	CGCG	1 cut(s)	561
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	2 cut(s)	94, 546
BstKTI	GATC	4 cut(s)	9, 117, 162, 673
BstMBI	GATC	4 cut(s)	6, 114, 159, 670
BstMWI	GCNNNNNNNGC	3 cut(s)	89, 626, 687
BstNI	CCWGG	1 cut(s)	533
BstNSI	RCATGY	1 cut(s)	633
BstSCI	CCNGG	3 cut(s)	53, 104, 531
BstSFI	CTRYAG	1 cut(s)	525
BstSLI	GKGCMC	1 cut(s)	325
BstUI	CGCG	1 cut(s)	561
BstV1I	GCAGC	2 cut(s)	539, 552
BstV2I	GAAGAC	1 cut(s)	559
BstX2I	RGATCY	1 cut(s)	114
BstYI	RGATCY	1 cut(s)	114
BsuRI	GGCC	1 cut(s)	572
BtgI	CCRYGG	1 cut(s)	325
BtsIMutI	CAGTG	2 cut(s)	448, 587
Cac8I	GCNNGC	4 cut(s)	563, 570, 618, 850
CfoI	GCGC	2 cut(s)	94, 546
Cfr13I	GGNCC	2 cut(s)	571, 809
CseI	GACGC	1 cut(s)	89
CviAII	CATG	5 cut(s)	326, 514, 630, 686, 754
DdeI	CTNAG	1 cut(s)	168
DpnI	GATC	4 cut(s)	8, 116, 161, 672
DpnII	GATC	4 cut(s)	6, 114, 159, 670
EciI	GGCGGA	1 cut(s)	41
Eco130I	CCWWGG	1 cut(s)	325
Eco24I	GRGCYC	1 cut(s)	112
Eco47I	GGWCC	1 cut(s)	809
Eco47III	AGCGCT	1 cut(s)	93
Eco72I	CACGTG	3 cut(s)	356, 693, 845
EcoRI	GAATTC	1 cut(s)	404
EcoRII	CCWGG	1 cut(s)	531
EcoT14I	CCWWGG	1 cut(s)	325
EcoT22I	ATGCAT	1 cut(s)	424
EcoT38I	GRGCYC	1 cut(s)	112
ErhI	CCWWGG	1 cut(s)	325
FaeI	CATG	5 cut(s)	329, 517, 633, 689, 757
FalI	AAGNNNNNCTT	2 cut(s)	657, 689
FaqI	GGGAC	2 cut(s)	197, 735
FatI	CATG	5 cut(s)	325, 513, 629, 685, 753
Fnu4HI	GCNGC	2 cut(s)	528, 566
FriOI	GRGCYC	1 cut(s)	112
Fsp4HI	GCNGC	2 cut(s)	528, 566
FspBI	CTAG	3 cut(s)	95, 549, 762
GlaI	GCGC	2 cut(s)	93, 545
GluI	GCNGC	2 cut(s)	528, 566
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	1 cut(s)	572
HapII	CCGG	2 cut(s)	54, 105
HgaI	GACGC	1 cut(s)	89
HhaI	GCGC	2 cut(s)	94, 546
Hin1I	GRCGYC	1 cut(s)	81
Hin1II	CATG	5 cut(s)	329, 517, 633, 689, 757
Hin6I	GCGC	2 cut(s)	92, 544
HinP1I	GCGC	2 cut(s)	92, 544
HincII	GTYRAC	2 cut(s)	193, 828
HindII	GTYRAC	2 cut(s)	193, 828
HpaII	CCGG	2 cut(s)	54, 105
HphI	GGTGA	2 cut(s)	511, 751
Hpy166II	GTNNAC	4 cut(s)	193, 448, 809, 828
Hpy188I	TCNGA	5 cut(s)	101, 114, 153, 176, 789
Hpy188III	TCNNGA	4 cut(s)	549, 596, 642, 674
Hpy8I	GTNNAC	4 cut(s)	193, 448, 809, 828
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	4 cut(s)	384, 462, 531, 671
HpyCH4III	ACNGT	3 cut(s)	452, 582, 832
HpyCH4IV	ACGT	4 cut(s)	308, 355, 692, 844
HpyCH4V	TGCA	4 cut(s)	422, 527, 650, 782
HpyF10VI	GCNNNNNNNGC	3 cut(s)	89, 626, 687
HpyF3I	CTNAG	1 cut(s)	168
HpySE526I	ACGT	4 cut(s)	308, 355, 692, 844
Hsp92I	GRCGYC	1 cut(s)	81
Hsp92II	CATG	5 cut(s)	329, 517, 633, 689, 757
HspAI	GCGC	2 cut(s)	92, 544
Kzo9I	GATC	4 cut(s)	6, 114, 159, 670
LmnI	GCTCC	4 cut(s)	39, 101, 376, 471
Lsp1109I	GCAGC	2 cut(s)	539, 552
LweI	GCATC	3 cut(s)	431, 637, 791
MaeI	CTAG	3 cut(s)	95, 549, 762
MaeII	ACGT	4 cut(s)	308, 355, 692, 844
MaeIII	GTNAC	2 cut(s)	695, 814
MalI	GATC	4 cut(s)	8, 116, 161, 672
MboI	GATC	4 cut(s)	6, 114, 159, 670
MboII	GAAGA	3 cut(s)	16, 395, 564
MflI	RGATCY	1 cut(s)	114
MhlI	GDGCHC	3 cut(s)	112, 325, 476
MluCI	AATT	4 cut(s)	14, 330, 404, 657
MmeI	TCCRAC	2 cut(s)	79, 329
MnlI	CCTC	6 cut(s)	4, 13, 16, 51, 567, 586
Mph1103I	ATGCAT	1 cut(s)	424
MroXI	GAANNNNTTC	1 cut(s)	408
MseI	TTAA	1 cut(s)	416
MslI	CAYNNNNRTG	1 cut(s)	417
MspI	CCGG	2 cut(s)	54, 105
MspR9I	CCNGG	3 cut(s)	55, 106, 533
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	1 cut(s)	533
MvnI	CGCG	1 cut(s)	561
MwoI	GCNNNNNNNGC	3 cut(s)	89, 626, 687
NciI	CCSGG	2 cut(s)	55, 106
NcoI	CCATGG	1 cut(s)	325
NdeII	GATC	4 cut(s)	6, 114, 159, 670
NlaIII	CATG	5 cut(s)	329, 517, 633, 689, 757
NlaIV	GGNNCC	5 cut(s)	103, 116, 219, 303, 573
NmuCI	GTSAC	2 cut(s)	695, 814
NsiI	ATGCAT	1 cut(s)	424
NspI	RCATGY	1 cut(s)	633
PctI	GAATGC	1 cut(s)	592
PdmI	GAANNNNTTC	1 cut(s)	408
PfoI	TCCNGGA	1 cut(s)	53
PkrI	GCNGC	2 cut(s)	529, 567
PmaCI	CACGTG	3 cut(s)	356, 693, 845
PmlI	CACGTG	3 cut(s)	356, 693, 845
Ppu21I	YACGTR	3 cut(s)	356, 693, 845
Psp6I	CCWGG	1 cut(s)	531
PspCI	CACGTG	3 cut(s)	356, 693, 845
PspGI	CCWGG	1 cut(s)	531
PspN4I	GGNNCC	5 cut(s)	103, 116, 219, 303, 573
PspPI	GGNCC	2 cut(s)	571, 809
PstI	CTGCAG	1 cut(s)	529
PsuI	RGATCY	1 cut(s)	114
RseI	CAYNNNNRTG	1 cut(s)	417
SaqAI	TTAA	1 cut(s)	416
SatI	GCNGC	2 cut(s)	528, 566
Sau3AI	GATC	4 cut(s)	6, 114, 159, 670
Sau96I	GGNCC	2 cut(s)	571, 809
ScrFI	CCNGG	3 cut(s)	55, 106, 533
SduI	GDGCHC	3 cut(s)	112, 325, 476
SfaNI	GCATC	3 cut(s)	431, 637, 791
SfcI	CTRYAG	1 cut(s)	525
SinI	GGWCC	1 cut(s)	809
SmiMI	CAYNNNNRTG	1 cut(s)	417
Sse9I	AATT	4 cut(s)	14, 330, 404, 657
SsiI	CCGC	4 cut(s)	26, 215, 264, 823
SspMI	CTAG	3 cut(s)	95, 549, 762
StyD4I	CCNGG	3 cut(s)	53, 104, 531
StyI	CCWWGG	1 cut(s)	325
TaaI	ACNGT	3 cut(s)	452, 582, 832
TaiI	ACGT	4 cut(s)	311, 358, 695, 847
TaqI	TCGA	2 cut(s)	9, 162
TasI	AATT	4 cut(s)	14, 330, 404, 657
Tru1I	TTAA	1 cut(s)	416
Tru9I	TTAA	1 cut(s)	416
TscAI	CASTG	2 cut(s)	455, 587
TseFI	GTSAC	2 cut(s)	695, 814
TseI	GCWGC	2 cut(s)	527, 565
Tsp45I	GTSAC	2 cut(s)	695, 814
TspDTI	ATGAA	5 cut(s)	17, 297, 306, 366, 397
TspGWI	ACGGA	1 cut(s)	627
TspRI	CASTG	2 cut(s)	455, 587
VpaK11BI	GGWCC	1 cut(s)	809
XapI	RAATTY	1 cut(s)	404
XbaI	TCTAGA	1 cut(s)	548
XceI	RCATGY	1 cut(s)	633
XmnI	GAANNNNTTC	1 cut(s)	408
XspI	CTAG	3 cut(s)	95, 549, 762
Zsp2I	ATGCAT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.