DNA mismatch repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24495 AT3G24495 |
| fragaria_vesca | FvH4_1g05130 FvH4_1g05130 |
| malus_domestica | MD15G1187500.v1.1 |
| prunus_persica | Prupe.7G228900_v2.0.a1 |
| pyrus_communis | pycom15g16830 |
| rosa_chinensis | RchiOBHm_Chr2g0090761 |
| rosa_laevigata | RLG00000016141 |
| rosa_multiflora | Rmu_ssc0000367.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00150840 |
| rosa_rugosa | Rorug02G0010300 |
| rosa_samantha | Rh2AG056300 Rh2BG055000 Rh2CG057400 Rh2DG055900 |
| rosa_wichuraiana | Rw2G004620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3061 |
| Acc36I | ACCTGC | 2 cut(s) | 943, 3061 |
| AccB1I | GGYRCC | 3 cut(s) | 193, 1253, 2666 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2986 |
| AccI | GTMKAC | 1 cut(s) | 1434 |
| AccII | CGCG | 3 cut(s) | 199, 2568, 2784 |
| AclWI | GGATC | 6 cut(s) | 13, 129, 690, 728, 3055, 3068 |
| AcoI | YGGCCR | 5 cut(s) | 85, 898, 1564, 3054, 3097 |
| AcsI | RAATTY | 5 cut(s) | 543, 863, 1241, 1453, 2897 |
| AcuI | CTGAAG | 2 cut(s) | 605, 1464 |
| AfaI | GTAC | 7 cut(s) | 1198, 1376, 1413, 1714, 1721, 2298, 2698 |
| AflII | CTTAAG | 2 cut(s) | 928, 3266 |
| AflIII | ACRYGT | 1 cut(s) | 2573 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1047, 2465 |
| AjnI | CCWGG | 2 cut(s) | 1061, 1574 |
| AleI | CACNNNNGTG | 1 cut(s) | 1184 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 163, 195 |
| Alw21I | GWGCWC | 2 cut(s) | 62, 1558 |
| Alw26I | GTCTC | 3 cut(s) | 66, 1034, 2970 |
| Alw44I | GTGCAC | 1 cut(s) | 1554 |
| AlwI | GGATC | 6 cut(s) | 13, 129, 690, 728, 3055, 3068 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1388, 2318 |
| Ama87I | CYCGRG | 1 cut(s) | 3065 |
| ApaLI | GTGCAC | 1 cut(s) | 1554 |
| ApeKI | GCWGC | 7 cut(s) | 1033, 1232, 1280, 1391, 2153, 3083, 3256 |
| ApoI | RAATTY | 5 cut(s) | 543, 863, 1241, 1453, 2897 |
| AseI | ATTAAT | 1 cut(s) | 1809 |
| AspA2I | CCTAGG | 1 cut(s) | 2485 |
| AspLEI | GCGC | 1 cut(s) | 2570 |
| AspS9I | GGNCC | 3 cut(s) | 497, 1139, 2534 |
| AsuC2I | CCSGG | 2 cut(s) | 510, 3058 |
| AsuHPI | GGTGA | 6 cut(s) | 1302, 1528, 1591, 2501, 2873, 2900 |
| AsuNHI | GCTAGC | 1 cut(s) | 671 |
| AvaI | CYCGRG | 1 cut(s) | 3065 |
| AvaII | GGWCC | 2 cut(s) | 497, 2534 |
| AvrII | CCTAGG | 1 cut(s) | 2485 |
| BaeGI | GKGCMC | 1 cut(s) | 1558 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1188, 1221 |
| BalI | TGGCCA | 3 cut(s) | 900, 1566, 3099 |
| BamHI | GGATCC | 1 cut(s) | 3060 |
| BanI | GGYRCC | 3 cut(s) | 193, 1253, 2666 |
| BanII | GRGCYC | 1 cut(s) | 62 |
| BbsI | GAAGAC | 1 cut(s) | 2644 |
| Bbv12I | GWGCWC | 2 cut(s) | 62, 1558 |
| BbvI | GCAGC | 7 cut(s) | 1045, 1219, 1267, 1378, 2165, 3095, 3268 |
| BceAI | ACGGC | 4 cut(s) | 100, 116, 309, 2675 |
| BciT130I | CCWGG | 2 cut(s) | 1063, 1576 |
| BciVI | GTATCC | 1 cut(s) | 1466 |
| BclI | TGATCA | 2 cut(s) | 451, 2128 |
| BcnI | CCSGG | 2 cut(s) | 510, 3058 |
| BcoDI | GTCTC | 3 cut(s) | 66, 1034, 2970 |
| BfaI | CTAG | 7 cut(s) | 80, 600, 672, 884, 2486, 2591, 2970 |
| BfmI | CTRYAG | 4 cut(s) | 1407, 1431, 2157, 2854 |
| BfrI | CTTAAG | 2 cut(s) | 928, 3266 |
| BfuAI | ACCTGC | 2 cut(s) | 943, 3061 |
| BfuI | GTATCC | 1 cut(s) | 1466 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3206 |
| BglII | AGATCT | 2 cut(s) | 1834, 2303 |
| BlnI | CCTAGG | 1 cut(s) | 2485 |
| BmcAI | AGTACT | 1 cut(s) | 1376 |
| Bme1390I | CCNGG | 4 cut(s) | 510, 1063, 1576, 3058 |
| Bme18I | GGWCC | 2 cut(s) | 497, 2534 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1047, 2465 |
| BmeT110I | CYCGRG | 1 cut(s) | 3065 |
| BmgT120I | GGNCC | 3 cut(s) | 497, 1139, 2534 |
| BmiI | GGNNCC | 7 cut(s) | 172, 195, 528, 627, 1255, 2668, 3062 |
| BmrFI | CCNGG | 4 cut(s) | 510, 1063, 1576, 3058 |
| BmrI | ACTGGG | 2 cut(s) | 2590, 2786 |
| BmtI | GCTAGC | 1 cut(s) | 675 |
| BmuI | ACTGGG | 2 cut(s) | 2590, 2786 |
| BoxI | GACNNNNGTC | 1 cut(s) | 645 |
| BpiI | GAAGAC | 1 cut(s) | 2644 |
| BpmI | CTGGAG | 4 cut(s) | 235, 569, 1058, 1694 |
| BpuEI | CTTGAG | 4 cut(s) | 357, 599, 2264, 2733 |
| BpuMI | CCSGG | 2 cut(s) | 510, 3058 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2133, 2505 |
| BsaI | GGTCTC | 1 cut(s) | 2970 |
| BsaJI | CCNNGG | 5 cut(s) | 1062, 1575, 2485, 2757, 3090 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 44, 74, 163, 193 |
| Bse118I | RCCGGY | 1 cut(s) | 2687 |
| Bse1I | ACTGG | 5 cut(s) | 252, 1845, 2536, 2596, 2781 |
| Bse3DI | GCAATG | 4 cut(s) | 587, 1401, 2921, 3054 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2133, 2505 |
| BseBI | CCWGG | 2 cut(s) | 1063, 1576 |
| BseDI | CCNNGG | 5 cut(s) | 1062, 1575, 2485, 2757, 3090 |
| BseGI | GGATG | 8 cut(s) | 715, 820, 841, 1657, 1783, 2212, 2431, 2509 |
| BseJI | GATNNNNATC | 2 cut(s) | 2133, 2505 |
| BseMI | GCAATG | 4 cut(s) | 587, 1401, 2921, 3054 |
| BseMII | CTCAG | 3 cut(s) | 113, 314, 2035 |
| BseNI | ACTGG | 5 cut(s) | 252, 1845, 2536, 2596, 2781 |
| BseRI | GAGGAG | 1 cut(s) | 325 |
| BseSI | GKGCMC | 1 cut(s) | 1558 |
| BseX3I | CGGCCG | 1 cut(s) | 85 |
| BseXI | GCAGC | 7 cut(s) | 1045, 1219, 1267, 1378, 2165, 3095, 3268 |
| BseYI | CCCAGC | 1 cut(s) | 46 |
| Bsh1236I | CGCG | 3 cut(s) | 199, 2568, 2784 |
| Bsh1285I | CGRYCG | 2 cut(s) | 88, 3152 |
| BshNI | GGYRCC | 3 cut(s) | 193, 1253, 2666 |
| BsiEI | CGRYCG | 2 cut(s) | 88, 3152 |
| BsiHKAI | GWGCWC | 2 cut(s) | 62, 1558 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3065 |
| BsiSI | CCGG | 6 cut(s) | 63, 107, 185, 509, 2688, 3057 |
| BslFI | GGGAC | 2 cut(s) | 2388, 2453 |
| BsmAI | GTCTC | 3 cut(s) | 66, 1034, 2970 |
| BsmBI | CGTCTC | 1 cut(s) | 66 |
| BsmFI | GGGAC | 2 cut(s) | 2388, 2453 |
| BsmI | GAATGC | 2 cut(s) | 2717, 2966 |
| Bso31I | GGTCTC | 1 cut(s) | 2970 |
| BsoBI | CYCGRG | 1 cut(s) | 3065 |
| Bsp1286I | GDGCHC | 2 cut(s) | 62, 1558 |
| Bsp1407I | TGTACA | 1 cut(s) | 1719 |
| BspCNI | CTCAG | 3 cut(s) | 112, 313, 2034 |
| BspFNI | CGCG | 3 cut(s) | 199, 2568, 2784 |
| BspHI | TCATGA | 2 cut(s) | 2188, 2682 |
| BspLI | GGNNCC | 7 cut(s) | 172, 195, 528, 627, 1255, 2668, 3062 |
| BspMAI | CTGCAG | 2 cut(s) | 1411, 2858 |
| BspMI | ACCTGC | 2 cut(s) | 943, 3061 |
| BspOI | GCTAGC | 1 cut(s) | 675 |
| BspPI | GGATC | 6 cut(s) | 13, 129, 690, 728, 3055, 3068 |
| BspT107I | GGYRCC | 3 cut(s) | 193, 1253, 2666 |
| BspTI | CTTAAG | 2 cut(s) | 928, 3266 |
| BspTNI | GGTCTC | 1 cut(s) | 2970 |
| BsrDI | GCAATG | 4 cut(s) | 587, 1401, 2921, 3054 |
| BsrFI | RCCGGY | 1 cut(s) | 2687 |
| BsrGI | TGTACA | 1 cut(s) | 1719 |
| BsrI | ACTGG | 5 cut(s) | 252, 1845, 2536, 2596, 2781 |
| BssAI | RCCGGY | 1 cut(s) | 2687 |
| BssECI | CCNNGG | 5 cut(s) | 1062, 1575, 2485, 2757, 3090 |
| BssT1I | CCWWGG | 3 cut(s) | 2485, 2757, 3090 |
| Bst2UI | CCWGG | 2 cut(s) | 1063, 1576 |
| Bst4CI | ACNGT | 9 cut(s) | 1183, 1201, 1416, 1517, 1719, 1739, 2288, 2427, 2678 |
| Bst6I | CTCTTC | 4 cut(s) | 244, 2385, 2565, 2968 |
| BstAFI | CTTAAG | 2 cut(s) | 928, 3266 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2318 |
| BstAUI | TGTACA | 1 cut(s) | 1719 |
| BstC8I | GCNNGC | 8 cut(s) | 11, 213, 630, 673, 1886, 3097, 3179, 3207 |
| BstDEI | CTNAG | 8 cut(s) | 99, 300, 637, 1897, 2021, 2108, 2138, 2300 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2489 |
| BstF5I | GGATG | 8 cut(s) | 715, 820, 841, 1657, 1783, 2212, 2431, 2509 |
| BstFNI | CGCG | 3 cut(s) | 199, 2568, 2784 |
| BstHHI | GCGC | 1 cut(s) | 2570 |
| BstMAI | GTCTC | 3 cut(s) | 66, 1034, 2970 |
| BstMCI | CGRYCG | 2 cut(s) | 88, 3152 |
| BstNI | CCWGG | 2 cut(s) | 1063, 1576 |
| BstNSI | RCATGY | 3 cut(s) | 2279, 2577, 2744 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 645 |
| BstSCI | CCNGG | 4 cut(s) | 508, 1061, 1574, 3056 |
| BstSFI | CTRYAG | 4 cut(s) | 1407, 1431, 2157, 2854 |
| BstSLI | GKGCMC | 1 cut(s) | 1558 |
| BstUI | CGCG | 3 cut(s) | 199, 2568, 2784 |
| BstV1I | GCAGC | 7 cut(s) | 1045, 1219, 1267, 1378, 2165, 3095, 3268 |
| BstV2I | GAAGAC | 1 cut(s) | 2644 |
| BstX2I | RGATCY | 3 cut(s) | 1834, 2303, 3060 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2578 |
| BstYI | RGATCY | 3 cut(s) | 1834, 2303, 3060 |
| BstZI | CGGCCG | 1 cut(s) | 85 |
| BsuI | GTATCC | 1 cut(s) | 1466 |
| BtgZI | GCGATG | 1 cut(s) | 2797 |
| BtsCI | GGATG | 8 cut(s) | 715, 820, 841, 1657, 1783, 2212, 2431, 2509 |
| BtsI | GCAGTG | 2 cut(s) | 399, 2122 |
| BtsIMutI | CAGTG | 8 cut(s) | 399, 1179, 1260, 1429, 1522, 1715, 2122, 2670 |
| BveI | ACCTGC | 2 cut(s) | 943, 3061 |
| Cac8I | GCNNGC | 8 cut(s) | 11, 213, 630, 673, 1886, 3097, 3179, 3207 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1388, 2318 |
| CciI | TCATGA | 2 cut(s) | 2188, 2682 |
| CfoI | GCGC | 1 cut(s) | 2570 |
| Cfr10I | RCCGGY | 1 cut(s) | 2687 |
| Cfr13I | GGNCC | 3 cut(s) | 497, 1139, 2534 |
| CseI | GACGC | 4 cut(s) | 83, 121, 188, 1445 |
| Csp6I | GTAC | 7 cut(s) | 1197, 1375, 1412, 1713, 1720, 2297, 2697 |
| CviQI | GTAC | 7 cut(s) | 1197, 1375, 1412, 1713, 1720, 2297, 2697 |
| DdeI | CTNAG | 8 cut(s) | 99, 300, 637, 1897, 2021, 2108, 2138, 2300 |
| DraI | TTTAAA | 2 cut(s) | 1239, 2095 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1047, 2465 |
| EaeI | YGGCCR | 5 cut(s) | 85, 898, 1564, 3054, 3097 |
| EagI | CGGCCG | 1 cut(s) | 85 |
| Eam1104I | CTCTTC | 4 cut(s) | 244, 2385, 2565, 2968 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1047, 2465 |
| EarI | CTCTTC | 4 cut(s) | 244, 2385, 2565, 2968 |
| EciI | GGCGGA | 3 cut(s) | 84, 171, 1039 |
| Ecl136II | GAGCTC | 1 cut(s) | 60 |
| EclXI | CGGCCG | 1 cut(s) | 85 |
| Eco130I | CCWWGG | 3 cut(s) | 2485, 2757, 3090 |
| Eco147I | AGGCCT | 2 cut(s) | 727, 2019 |
| Eco24I | GRGCYC | 1 cut(s) | 62 |
| Eco31I | GGTCTC | 1 cut(s) | 2970 |
| Eco32I | GATATC | 1 cut(s) | 2647 |
| Eco47I | GGWCC | 2 cut(s) | 497, 2534 |
| Eco52I | CGGCCG | 1 cut(s) | 85 |
| Eco53kI | GAGCTC | 1 cut(s) | 60 |
| Eco57I | CTGAAG | 2 cut(s) | 605, 1464 |
| Eco88I | CYCGRG | 1 cut(s) | 3065 |
| EcoICRI | GAGCTC | 1 cut(s) | 60 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2489 |
| EcoRI | GAATTC | 1 cut(s) | 543 |
| EcoRII | CCWGG | 2 cut(s) | 1061, 1574 |
| EcoRV | GATATC | 1 cut(s) | 2647 |
| EcoT14I | CCWWGG | 3 cut(s) | 2485, 2757, 3090 |
| EcoT38I | GRGCYC | 1 cut(s) | 62 |
| ErhI | CCWWGG | 3 cut(s) | 2485, 2757, 3090 |
| Esp3I | CGTCTC | 1 cut(s) | 66 |
| FaqI | GGGAC | 2 cut(s) | 2388, 2453 |
| FauI | CCCGC | 1 cut(s) | 2892 |
| FbaI | TGATCA | 2 cut(s) | 451, 2128 |
| FblI | GTMKAC | 1 cut(s) | 1434 |
| FokI | GGATG | 8 cut(s) | 722, 827, 848, 1664, 1770, 2219, 2418, 2496 |
| FriOI | GRGCYC | 1 cut(s) | 62 |
| FspBI | CTAG | 7 cut(s) | 80, 600, 672, 884, 2486, 2591, 2970 |
| GlaI | GCGC | 1 cut(s) | 2569 |
| GsaI | CCCAGC | 1 cut(s) | 50 |
| GsuI | CTGGAG | 4 cut(s) | 235, 569, 1058, 1694 |
| HapII | CCGG | 6 cut(s) | 63, 107, 185, 509, 2688, 3057 |
| HgaI | GACGC | 4 cut(s) | 83, 121, 188, 1445 |
| HhaI | GCGC | 1 cut(s) | 2570 |
| Hin6I | GCGC | 1 cut(s) | 2568 |
| HinP1I | GCGC | 1 cut(s) | 2568 |
| HindIII | AAGCTT | 2 cut(s) | 575, 1886 |
| HpaII | CCGG | 6 cut(s) | 63, 107, 185, 509, 2688, 3057 |
| HphI | GGTGA | 6 cut(s) | 1302, 1528, 1591, 2501, 2873, 2900 |
| Hpy166II | GTNNAC | 6 cut(s) | 359, 386, 1435, 1556, 1715, 1722 |
| Hpy8I | GTNNAC | 6 cut(s) | 359, 386, 1435, 1556, 1715, 1722 |
| Hpy99I | CGWCG | 3 cut(s) | 115, 491, 3227 |
| HpyAV | CCTTC | 9 cut(s) | 37, 184, 256, 268, 717, 2054, 2887, 2976, 3167 |
| HpyCH4III | ACNGT | 9 cut(s) | 1183, 1201, 1416, 1517, 1719, 1739, 2288, 2427, 2678 |
| HpyCH4IV | ACGT | 3 cut(s) | 489, 520, 2699 |
| HpyF3I | CTNAG | 8 cut(s) | 99, 300, 637, 1897, 2021, 2108, 2138, 2300 |
| HpySE526I | ACGT | 3 cut(s) | 489, 520, 2699 |
| HspAI | GCGC | 1 cut(s) | 2568 |
| Ksp22I | TGATCA | 2 cut(s) | 451, 2128 |
| LmnI | GCTCC | 3 cut(s) | 65, 625, 907 |
| Lsp1109I | GCAGC | 7 cut(s) | 1045, 1219, 1267, 1378, 2165, 3095, 3268 |
| MaeI | CTAG | 7 cut(s) | 80, 600, 672, 884, 2486, 2591, 2970 |
| MaeII | ACGT | 3 cut(s) | 489, 520, 2699 |
| MaeIII | GTNAC | 7 cut(s) | 163, 1105, 1308, 1741, 2165, 2314, 2917 |
| MfeI | CAATTG | 2 cut(s) | 1400, 3117 |
| MflI | RGATCY | 3 cut(s) | 1834, 2303, 3060 |
| MhlI | GDGCHC | 2 cut(s) | 62, 1558 |
| MlsI | TGGCCA | 3 cut(s) | 900, 1566, 3099 |
| MluNI | TGGCCA | 3 cut(s) | 900, 1566, 3099 |
| MlyI | GAGTC | 4 cut(s) | 230, 322, 655, 1654 |
| Mox20I | TGGCCA | 3 cut(s) | 900, 1566, 3099 |
| MscI | TGGCCA | 3 cut(s) | 900, 1566, 3099 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1184, 2913 |
| Msp20I | TGGCCA | 3 cut(s) | 900, 1566, 3099 |
| MspA1I | CMGCKG | 2 cut(s) | 1036, 2156 |
| MspCI | CTTAAG | 2 cut(s) | 928, 3266 |
| MspI | CCGG | 6 cut(s) | 63, 107, 185, 509, 2688, 3057 |
| MspR9I | CCNGG | 4 cut(s) | 510, 1063, 1576, 3058 |
| MunI | CAATTG | 2 cut(s) | 1400, 3117 |
| Mva1269I | GAATGC | 2 cut(s) | 2717, 2966 |
| MvaI | CCWGG | 2 cut(s) | 1063, 1576 |
| MvnI | CGCG | 3 cut(s) | 199, 2568, 2784 |
| NciI | CCSGG | 2 cut(s) | 510, 3058 |
| NheI | GCTAGC | 1 cut(s) | 671 |
| NlaIV | GGNNCC | 7 cut(s) | 172, 195, 528, 627, 1255, 2668, 3062 |
| NmeAIII | GCCGAG | 1 cut(s) | 116 |
| NmuCI | GTSAC | 4 cut(s) | 1105, 1308, 1741, 2165 |
| NspI | RCATGY | 3 cut(s) | 2279, 2577, 2744 |
| OliI | CACNNNNGTG | 1 cut(s) | 1184 |
| PagI | TCATGA | 2 cut(s) | 2188, 2682 |
| PaqCI | CACCTGC | 1 cut(s) | 3061 |
| PceI | AGGCCT | 2 cut(s) | 727, 2019 |
| PciI | ACATGT | 1 cut(s) | 2573 |
| PctI | GAATGC | 2 cut(s) | 2717, 2966 |
| PfeI | GAWTC | 6 cut(s) | 1081, 1427, 1501, 2185, 2201, 2753 |
| PflFI | GACNNNGTC | 1 cut(s) | 2480 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2986 |
| Ple19I | CGATCG | 1 cut(s) | 3152 |
| PleI | GAGTC | 4 cut(s) | 230, 321, 654, 1654 |
| PpsI | GAGTC | 4 cut(s) | 230, 321, 654, 1654 |
| PscI | ACATGT | 1 cut(s) | 2573 |
| PshAI | GACNNNNGTC | 1 cut(s) | 645 |
| PshBI | ATTAAT | 1 cut(s) | 1809 |
| Psp124BI | GAGCTC | 1 cut(s) | 62 |
| Psp6I | CCWGG | 2 cut(s) | 1061, 1574 |
| PspFI | CCCAGC | 1 cut(s) | 46 |
| PspGI | CCWGG | 2 cut(s) | 1061, 1574 |
| PspN4I | GGNNCC | 7 cut(s) | 172, 195, 528, 627, 1255, 2668, 3062 |
| PspPI | GGNCC | 3 cut(s) | 497, 1139, 2534 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2082, 2114 |
| PstI | CTGCAG | 2 cut(s) | 1411, 2858 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1388, 2318 |
| PsuI | RGATCY | 3 cut(s) | 1834, 2303, 3060 |
| PsyI | GACNNNGTC | 1 cut(s) | 2480 |
| PvuI | CGATCG | 1 cut(s) | 3152 |
| PvuII | CAGCTG | 2 cut(s) | 1036, 2156 |
| RsaI | GTAC | 7 cut(s) | 1198, 1376, 1413, 1714, 1721, 2298, 2698 |
| RsaNI | GTAC | 7 cut(s) | 1197, 1375, 1412, 1713, 1720, 2297, 2697 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1184, 2913 |
| SacI | GAGCTC | 1 cut(s) | 62 |
| Sau96I | GGNCC | 3 cut(s) | 497, 1139, 2534 |
| ScaI | AGTACT | 1 cut(s) | 1376 |
| SchI | GAGTC | 4 cut(s) | 230, 322, 655, 1654 |
| ScrFI | CCNGG | 4 cut(s) | 510, 1063, 1576, 3058 |
| SduI | GDGCHC | 2 cut(s) | 62, 1558 |
| SfcI | CTRYAG | 4 cut(s) | 1407, 1431, 2157, 2854 |
| SinI | GGWCC | 2 cut(s) | 497, 2534 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1184, 2913 |
| SmlI | CTYRAG | 6 cut(s) | 372, 578, 928, 2243, 2748, 3266 |
| SmoI | CTYRAG | 6 cut(s) | 372, 578, 928, 2243, 2748, 3266 |
| SseBI | AGGCCT | 2 cut(s) | 727, 2019 |
| SspI | AATATT | 3 cut(s) | 809, 1135, 2416 |
| SspMI | CTAG | 7 cut(s) | 80, 600, 672, 884, 2486, 2591, 2970 |
| SstI | GAGCTC | 1 cut(s) | 62 |
| StuI | AGGCCT | 2 cut(s) | 727, 2019 |
| StyD4I | CCNGG | 4 cut(s) | 508, 1061, 1574, 3056 |
| StyI | CCWWGG | 3 cut(s) | 2485, 2757, 3090 |
| TaaI | ACNGT | 9 cut(s) | 1183, 1201, 1416, 1517, 1719, 1739, 2288, 2427, 2678 |
| TaiI | ACGT | 3 cut(s) | 492, 523, 2702 |
| TaqI | TCGA | 3 cut(s) | 17, 474, 2841 |
| TaqII | GACCGA | 1 cut(s) | 708 |
| TatI | WGTACW | 4 cut(s) | 1374, 1411, 1719, 2296 |
| TauI | GCSGC | 4 cut(s) | 69, 90, 199, 1762 |
| TfiI | GAWTC | 6 cut(s) | 1081, 1427, 1501, 2185, 2201, 2753 |
| TscAI | CASTG | 8 cut(s) | 399, 1186, 1267, 1429, 1522, 1722, 2122, 2677 |
| TseFI | GTSAC | 4 cut(s) | 1105, 1308, 1741, 2165 |
| TseI | GCWGC | 7 cut(s) | 1033, 1232, 1280, 1391, 2153, 3083, 3256 |
| Tsp45I | GTSAC | 4 cut(s) | 1105, 1308, 1741, 2165 |
| TspGWI | ACGGA | 5 cut(s) | 1615, 1776, 1783, 1930, 2817 |
| TspRI | CASTG | 8 cut(s) | 399, 1186, 1267, 1429, 1522, 1722, 2122, 2677 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2480 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2986 |
| Vha464I | CTTAAG | 2 cut(s) | 928, 3266 |
| VneI | GTGCAC | 1 cut(s) | 1554 |
| VpaK11BI | GGWCC | 2 cut(s) | 497, 2534 |
| VspI | ATTAAT | 1 cut(s) | 1809 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2489 |
| XapI | RAATTY | 5 cut(s) | 543, 863, 1241, 1453, 2897 |
| XbaI | TCTAGA | 1 cut(s) | 2969 |
| XceI | RCATGY | 3 cut(s) | 2279, 2577, 2744 |
| XmaJI | CCTAGG | 1 cut(s) | 2485 |
| XmiI | GTMKAC | 1 cut(s) | 1434 |
| XspI | CTAG | 7 cut(s) | 80, 600, 672, 884, 2486, 2591, 2970 |
| ZrmI | AGTACT | 1 cut(s) | 1376 |