Methylenetetrahydrofolate reductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44160 AT3G59970 AT3G59970 |
| fragaria_vesca | FvH4_1g00040 FvH4_1g00040 |
| malus_domestica | MD00G1145100.v1.1 MD02G1001200.v1.1 MD15G1141700.v1.1 |
| prunus_persica | Prupe.7G271500_v2.0.a1 |
| pyrus_communis | pycom15g12800 |
| rosa_chinensis | RchiOBHm_Chr2g0084261 |
| rosa_laevigata | RLG00000015604 |
| rosa_multiflora | Rmu_sc0003129.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00156200 |
| rosa_rugosa | Rorug01G0452200 |
| rosa_samantha | Rh2AG000600 Rh2BG000500 Rh2CG000400 Rh2DG000600 |
| rosa_wichuraiana | Rw2G000040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 260 |
| AatII | GACGTC | 1 cut(s) | 952 |
| Acc36I | ACCTGC | 1 cut(s) | 260 |
| AccB1I | GGYRCC | 1 cut(s) | 560 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1038 |
| AccI | GTMKAC | 2 cut(s) | 176, 270 |
| AccII | CGCG | 1 cut(s) | 1131 |
| AciI | CCGC | 8 cut(s) | 74, 167, 182, 344, 1117, 1334, 1377, 1566 |
| AclI | AACGTT | 1 cut(s) | 321 |
| AclWI | GGATC | 5 cut(s) | 13, 192, 367, 1592, 1605 |
| AcoI | YGGCCR | 4 cut(s) | 352, 1118, 1488, 1725 |
| AcsI | RAATTY | 4 cut(s) | 611, 792, 1193, 1202 |
| AcuI | CTGAAG | 1 cut(s) | 1238 |
| AcvI | CACGTG | 1 cut(s) | 1124 |
| AcyI | GRCGYC | 3 cut(s) | 444, 480, 949 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 139, 350, 355, 403, 1038, 1088, 1333 |
| AgsI | TTSAA | 7 cut(s) | 541, 914, 1148, 1178, 1441, 1637, 1700 |
| AjiI | CACGTC | 1 cut(s) | 1362 |
| AjnI | CCWGG | 6 cut(s) | 21, 354, 402, 658, 1381, 1752 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 866, 898, 1216, 1248 |
| AluBI | AGCT | 4 cut(s) | 731, 776, 1017, 1716 |
| AluI | AGCT | 4 cut(s) | 731, 776, 1017, 1716 |
| Alw21I | GWGCWC | 2 cut(s) | 1096, 1129 |
| Alw26I | GTCTC | 3 cut(s) | 911, 940, 1256 |
| Alw44I | GTGCAC | 1 cut(s) | 1125 |
| AlwI | GGATC | 5 cut(s) | 13, 192, 367, 1592, 1605 |
| ApaLI | GTGCAC | 1 cut(s) | 1125 |
| ApeKI | GCWGC | 2 cut(s) | 743, 1227 |
| ApoI | RAATTY | 4 cut(s) | 611, 792, 1193, 1202 |
| AseI | ATTAAT | 2 cut(s) | 675, 893 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 981, 1307 |
| AspLEI | GCGC | 1 cut(s) | 395 |
| AspS9I | GGNCC | 7 cut(s) | 130, 1029, 1042, 1236, 1379, 1656, 1705 |
| AsuC2I | CCSGG | 3 cut(s) | 140, 335, 476 |
| AsuHPI | GGTGA | 8 cut(s) | 19, 241, 400, 443, 788, 1079, 1688, 1769 |
| AsuII | TTCGAA | 1 cut(s) | 1427 |
| AvaII | GGWCC | 4 cut(s) | 1029, 1042, 1236, 1705 |
| AxyI | CCTNAGG | 1 cut(s) | 1671 |
| BaeGI | GKGCMC | 1 cut(s) | 1129 |
| BalI | TGGCCA | 2 cut(s) | 354, 1727 |
| BamHI | GGATCC | 1 cut(s) | 1597 |
| BanI | GGYRCC | 1 cut(s) | 560 |
| BbrPI | CACGTG | 1 cut(s) | 1124 |
| Bbv12I | GWGCWC | 2 cut(s) | 1096, 1129 |
| BbvCI | CCTCAGC | 1 cut(s) | 732 |
| BbvI | GCAGC | 2 cut(s) | 730, 1239 |
| BceAI | ACGGC | 3 cut(s) | 195, 325, 1475 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 193, 227 |
| BciT130I | CCWGG | 6 cut(s) | 23, 356, 404, 660, 1383, 1754 |
| BcnI | CCSGG | 3 cut(s) | 140, 335, 476 |
| BcoDI | GTCTC | 3 cut(s) | 911, 940, 1256 |
| BfaI | CTAG | 5 cut(s) | 1244, 1286, 1412, 1605, 1686 |
| BfuAI | ACCTGC | 1 cut(s) | 260 |
| BglII | AGATCT | 1 cut(s) | 1349 |
| BisI | GCNGC | 3 cut(s) | 744, 1118, 1228 |
| BlsI | GCNGC | 3 cut(s) | 745, 1119, 1229 |
| Bme1390I | CCNGG | 9 cut(s) | 23, 140, 335, 356, 404, 476, 660, 1383, 1754 |
| Bme18I | GGWCC | 4 cut(s) | 1029, 1042, 1236, 1705 |
| BmgBI | CACGTC | 1 cut(s) | 1362 |
| BmgT120I | GGNCC | 7 cut(s) | 130, 1029, 1042, 1236, 1379, 1656, 1705 |
| BmiI | GGNNCC | 5 cut(s) | 562, 753, 805, 1043, 1599 |
| BmrFI | CCNGG | 9 cut(s) | 23, 140, 335, 356, 404, 476, 660, 1383, 1754 |
| BmsI | GCATC | 4 cut(s) | 201, 231, 544, 859 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1664, 1696 |
| BpmI | CTGGAG | 1 cut(s) | 1404 |
| Bpu10I | CCTNAGC | 1 cut(s) | 732 |
| Bpu14I | TTCGAA | 1 cut(s) | 1427 |
| BpuMI | CCSGG | 3 cut(s) | 140, 335, 476 |
| BsaAI | YACGTR | 1 cut(s) | 1124 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1513 |
| BsaHI | GRCGYC | 3 cut(s) | 444, 480, 949 |
| BsaI | GGTCTC | 1 cut(s) | 911 |
| BsaJI | CCNNGG | 9 cut(s) | 334, 349, 376, 747, 799, 941, 1210, 1232, 1753 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 17, 47, 89, 119, 1377, 1407 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 139, 350, 355, 403, 1038, 1088, 1333 |
| Bse1I | ACTGG | 2 cut(s) | 709, 1728 |
| Bse21I | CCTNAGG | 1 cut(s) | 1671 |
| Bse3DI | GCAATG | 1 cut(s) | 198 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1513 |
| BseBI | CCWGG | 6 cut(s) | 23, 356, 404, 660, 1383, 1754 |
| BseDI | CCNNGG | 9 cut(s) | 334, 349, 376, 747, 799, 941, 1210, 1232, 1753 |
| BseGI | GGATG | 7 cut(s) | 94, 120, 129, 499, 1507, 1630, 1658 |
| BseJI | GATNNNNATC | 1 cut(s) | 1513 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 139, 350, 355, 403, 1038, 1088, 1333 |
| BseMI | GCAATG | 1 cut(s) | 198 |
| BseMII | CTCAG | 3 cut(s) | 593, 723, 1662 |
| BseNI | ACTGG | 2 cut(s) | 709, 1728 |
| BseRI | GAGGAG | 1 cut(s) | 53 |
| BseSI | GKGCMC | 1 cut(s) | 1129 |
| BseXI | GCAGC | 2 cut(s) | 730, 1239 |
| BseYI | CCCAGC | 2 cut(s) | 1038, 1371 |
| BsgI | GTGCAG | 1 cut(s) | 238 |
| Bsh1236I | CGCG | 1 cut(s) | 1131 |
| BshNI | GGYRCC | 1 cut(s) | 560 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1096, 1129 |
| BsiSI | CCGG | 3 cut(s) | 140, 334, 476 |
| BslFI | GGGAC | 3 cut(s) | 993, 1055, 1145 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 139, 350, 355, 403, 1038, 1088, 1333 |
| BsmAI | GTCTC | 3 cut(s) | 911, 940, 1256 |
| BsmBI | CGTCTC | 2 cut(s) | 940, 1256 |
| BsmFI | GGGAC | 3 cut(s) | 993, 1055, 1145 |
| BsmI | GAATGC | 2 cut(s) | 1447, 1546 |
| Bso31I | GGTCTC | 1 cut(s) | 911 |
| Bsp119I | TTCGAA | 1 cut(s) | 1427 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1096, 1129 |
| Bsp143I | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| Bsp19I | CCATGG | 1 cut(s) | 349 |
| BspACI | CCGC | 8 cut(s) | 74, 167, 182, 344, 1117, 1334, 1377, 1566 |
| BspCNI | CTCAG | 3 cut(s) | 592, 724, 1663 |
| BspFNI | CGCG | 1 cut(s) | 1131 |
| BspLI | GGNNCC | 5 cut(s) | 562, 753, 805, 1043, 1599 |
| BspMI | ACCTGC | 1 cut(s) | 260 |
| BspPI | GGATC | 5 cut(s) | 13, 192, 367, 1592, 1605 |
| BspQI | GCTCTTC | 1 cut(s) | 1473 |
| BspT104I | TTCGAA | 1 cut(s) | 1427 |
| BspT107I | GGYRCC | 1 cut(s) | 560 |
| BspTNI | GGTCTC | 1 cut(s) | 911 |
| BsrDI | GCAATG | 1 cut(s) | 198 |
| BsrI | ACTGG | 2 cut(s) | 709, 1728 |
| BssECI | CCNNGG | 9 cut(s) | 334, 349, 376, 747, 799, 941, 1210, 1232, 1753 |
| BssMI | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| BssNI | GRCGYC | 3 cut(s) | 444, 480, 949 |
| BssT1I | CCWWGG | 7 cut(s) | 349, 376, 747, 799, 941, 1210, 1232 |
| Bst2UI | CCWGG | 6 cut(s) | 23, 356, 404, 660, 1383, 1754 |
| Bst4CI | ACNGT | 3 cut(s) | 451, 626, 1591 |
| Bst6I | CTCTTC | 4 cut(s) | 536, 909, 1473, 1695 |
| BstACI | GRCGYC | 3 cut(s) | 444, 480, 949 |
| BstBAI | YACGTR | 1 cut(s) | 1124 |
| BstBI | TTCGAA | 1 cut(s) | 1427 |
| BstC8I | GCNNGC | 5 cut(s) | 391, 457, 1129, 1379, 1660 |
| BstDEI | CTNAG | 3 cut(s) | 579, 732, 1671 |
| BstDSI | CCRYGG | 1 cut(s) | 349 |
| BstEII | GGTNACC | 1 cut(s) | 406 |
| BstF5I | GGATG | 7 cut(s) | 94, 120, 129, 499, 1507, 1630, 1658 |
| BstFNI | CGCG | 1 cut(s) | 1131 |
| BstHHI | GCGC | 1 cut(s) | 395 |
| BstKTI | GATC | 8 cut(s) | 21, 187, 279, 375, 529, 1272, 1352, 1600 |
| BstMAI | GTCTC | 3 cut(s) | 911, 940, 1256 |
| BstMBI | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 234, 390, 1775 |
| BstNI | CCWGG | 6 cut(s) | 23, 356, 404, 660, 1383, 1754 |
| BstNSI | RCATGY | 1 cut(s) | 265 |
| BstPI | GGTNACC | 1 cut(s) | 406 |
| BstSCI | CCNGG | 9 cut(s) | 21, 138, 333, 354, 402, 474, 658, 1381, 1752 |
| BstSLI | GKGCMC | 1 cut(s) | 1129 |
| BstUI | CGCG | 1 cut(s) | 1131 |
| BstV1I | GCAGC | 2 cut(s) | 730, 1239 |
| BstX2I | RGATCY | 5 cut(s) | 18, 184, 372, 1349, 1597 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 996 |
| BstYI | RGATCY | 5 cut(s) | 18, 184, 372, 1349, 1597 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1671 |
| BtgI | CCRYGG | 1 cut(s) | 349 |
| BtgZI | GCGATG | 1 cut(s) | 1075 |
| BtrI | CACGTC | 1 cut(s) | 1362 |
| BtsCI | GGATG | 7 cut(s) | 94, 120, 129, 499, 1507, 1630, 1658 |
| BtsIMutI | CAGTG | 3 cut(s) | 447, 594, 860 |
| BveI | ACCTGC | 1 cut(s) | 260 |
| Cac8I | GCNNGC | 5 cut(s) | 391, 457, 1129, 1379, 1660 |
| CfoI | GCGC | 1 cut(s) | 395 |
| Cfr13I | GGNCC | 7 cut(s) | 130, 1029, 1042, 1236, 1379, 1656, 1705 |
| CseI | GACGC | 3 cut(s) | 199, 433, 488 |
| CsiI | ACCWGGT | 1 cut(s) | 402 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1348, 1383, 1575, 1610 |
| DdeI | CTNAG | 3 cut(s) | 579, 732, 1671 |
| DpnI | GATC | 8 cut(s) | 20, 186, 278, 374, 528, 1271, 1351, 1599 |
| DpnII | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| EaeI | YGGCCR | 4 cut(s) | 352, 1118, 1488, 1725 |
| Eam1104I | CTCTTC | 4 cut(s) | 536, 909, 1473, 1695 |
| EarI | CTCTTC | 4 cut(s) | 536, 909, 1473, 1695 |
| EciI | GGCGGA | 1 cut(s) | 197 |
| Eco130I | CCWWGG | 7 cut(s) | 349, 376, 747, 799, 941, 1210, 1232 |
| Eco147I | AGGCCT | 1 cut(s) | 934 |
| Eco31I | GGTCTC | 1 cut(s) | 911 |
| Eco32I | GATATC | 2 cut(s) | 1183, 1515 |
| Eco47I | GGWCC | 4 cut(s) | 1029, 1042, 1236, 1705 |
| Eco57I | CTGAAG | 1 cut(s) | 1238 |
| Eco72I | CACGTG | 1 cut(s) | 1124 |
| Eco81I | CCTNAGG | 1 cut(s) | 1671 |
| Eco91I | GGTNACC | 1 cut(s) | 406 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1042 |
| EcoO65I | GGTNACC | 1 cut(s) | 406 |
| EcoRI | GAATTC | 1 cut(s) | 792 |
| EcoRII | CCWGG | 6 cut(s) | 21, 354, 402, 658, 1381, 1752 |
| EcoRV | GATATC | 2 cut(s) | 1183, 1515 |
| EcoT14I | CCWWGG | 7 cut(s) | 349, 376, 747, 799, 941, 1210, 1232 |
| ErhI | CCWWGG | 7 cut(s) | 349, 376, 747, 799, 941, 1210, 1232 |
| Esp3I | CGTCTC | 2 cut(s) | 940, 1256 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1216, 1248, 1296, 1328 |
| FaqI | GGGAC | 3 cut(s) | 993, 1055, 1145 |
| FauI | CCCGC | 5 cut(s) | 81, 160, 351, 1370, 1573 |
| FauNDI | CATATG | 1 cut(s) | 1087 |
| FblI | GTMKAC | 2 cut(s) | 176, 270 |
| Fnu4HI | GCNGC | 3 cut(s) | 744, 1118, 1228 |
| FokI | GGATG | 7 cut(s) | 101, 127, 136, 506, 1514, 1637, 1665 |
| Fsp4HI | GCNGC | 3 cut(s) | 744, 1118, 1228 |
| FspBI | CTAG | 5 cut(s) | 1244, 1286, 1412, 1605, 1686 |
| GlaI | GCGC | 1 cut(s) | 394 |
| GluI | GCNGC | 3 cut(s) | 744, 1118, 1228 |
| GsaI | CCCAGC | 2 cut(s) | 1042, 1375 |
| GsuI | CTGGAG | 1 cut(s) | 1404 |
| HapII | CCGG | 3 cut(s) | 140, 334, 476 |
| HgaI | GACGC | 3 cut(s) | 199, 433, 488 |
| HhaI | GCGC | 1 cut(s) | 395 |
| Hin1I | GRCGYC | 3 cut(s) | 444, 480, 949 |
| Hin6I | GCGC | 1 cut(s) | 393 |
| HinP1I | GCGC | 1 cut(s) | 393 |
| HincII | GTYRAC | 2 cut(s) | 177, 271 |
| HindII | GTYRAC | 2 cut(s) | 177, 271 |
| HinfI | GANTC | 6 cut(s) | 690, 898, 1070, 1355, 1557, 1679 |
| HpaII | CCGG | 3 cut(s) | 140, 334, 476 |
| HphI | GGTGA | 8 cut(s) | 19, 241, 400, 443, 788, 1079, 1688, 1769 |
| Hpy166II | GTNNAC | 5 cut(s) | 177, 271, 619, 1127, 1495 |
| Hpy188I | TCNGA | 8 cut(s) | 189, 372, 419, 1240, 1354, 1401, 1530, 1787 |
| Hpy188III | TCNNGA | 5 cut(s) | 464, 509, 1412, 1647, 1708 |
| Hpy8I | GTNNAC | 5 cut(s) | 177, 271, 619, 1127, 1495 |
| Hpy99I | CGWCG | 1 cut(s) | 181 |
| HpyAV | CCTTC | 4 cut(s) | 40, 1092, 1423, 1615 |
| HpyCH4III | ACNGT | 3 cut(s) | 451, 626, 1591 |
| HpyCH4IV | ACGT | 6 cut(s) | 158, 321, 845, 949, 1123, 1361 |
| HpyCH4V | TGCA | 8 cut(s) | 214, 244, 255, 816, 850, 956, 1127, 1461 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 234, 390, 1775 |
| HpyF3I | CTNAG | 3 cut(s) | 579, 732, 1671 |
| HpySE526I | ACGT | 6 cut(s) | 158, 321, 845, 949, 1123, 1361 |
| Hsp92I | GRCGYC | 3 cut(s) | 444, 480, 949 |
| HspAI | GCGC | 1 cut(s) | 393 |
| Kzo9I | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| LguI | GCTCTTC | 1 cut(s) | 1473 |
| LmnI | GCTCC | 2 cut(s) | 751, 1091 |
| Lsp1109I | GCAGC | 2 cut(s) | 730, 1239 |
| LweI | GCATC | 4 cut(s) | 201, 231, 544, 859 |
| MabI | ACCWGGT | 1 cut(s) | 402 |
| MaeI | CTAG | 5 cut(s) | 1244, 1286, 1412, 1605, 1686 |
| MaeII | ACGT | 6 cut(s) | 158, 321, 845, 949, 1123, 1361 |
| MaeIII | GTNAC | 7 cut(s) | 406, 431, 445, 736, 1076, 1546, 1676 |
| MalI | GATC | 8 cut(s) | 20, 186, 278, 374, 528, 1271, 1351, 1599 |
| MboI | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| MflI | RGATCY | 5 cut(s) | 18, 184, 372, 1349, 1597 |
| MhlI | GDGCHC | 2 cut(s) | 1096, 1129 |
| MlsI | TGGCCA | 2 cut(s) | 354, 1727 |
| MluNI | TGGCCA | 2 cut(s) | 354, 1727 |
| MlyI | GAGTC | 2 cut(s) | 1566, 1673 |
| MmeI | TCCRAC | 3 cut(s) | 15, 87, 1606 |
| Mox20I | TGGCCA | 2 cut(s) | 354, 1727 |
| MroXI | GAANNNNTTC | 2 cut(s) | 981, 1307 |
| MscI | TGGCCA | 2 cut(s) | 354, 1727 |
| MseI | TTAA | 5 cut(s) | 675, 893, 972, 1197, 1296 |
| MslI | CAYNNNNRTG | 4 cut(s) | 227, 260, 698, 1490 |
| Msp20I | TGGCCA | 2 cut(s) | 354, 1727 |
| MspA1I | CMGCKG | 2 cut(s) | 731, 1334 |
| MspI | CCGG | 3 cut(s) | 140, 334, 476 |
| MspR9I | CCNGG | 9 cut(s) | 23, 140, 335, 356, 404, 476, 660, 1383, 1754 |
| Mva1269I | GAATGC | 2 cut(s) | 1447, 1546 |
| MvaI | CCWGG | 6 cut(s) | 23, 356, 404, 660, 1383, 1754 |
| MvnI | CGCG | 1 cut(s) | 1131 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 234, 390, 1775 |
| NciI | CCSGG | 3 cut(s) | 140, 335, 476 |
| NcoI | CCATGG | 1 cut(s) | 349 |
| NdeI | CATATG | 1 cut(s) | 1087 |
| NdeII | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| NlaIV | GGNNCC | 5 cut(s) | 562, 753, 805, 1043, 1599 |
| NmuCI | GTSAC | 5 cut(s) | 406, 431, 445, 1546, 1676 |
| NspI | RCATGY | 1 cut(s) | 265 |
| NspV | TTCGAA | 1 cut(s) | 1427 |
| PaqCI | CACCTGC | 1 cut(s) | 260 |
| PceI | AGGCCT | 1 cut(s) | 934 |
| PciSI | GCTCTTC | 1 cut(s) | 1473 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 276, 507 |
| PctI | GAATGC | 2 cut(s) | 1447, 1546 |
| PdmI | GAANNNNTTC | 2 cut(s) | 981, 1307 |
| PfeI | GAWTC | 4 cut(s) | 690, 898, 1070, 1355 |
| PflFI | GACNNNGTC | 1 cut(s) | 404 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1038 |
| PfoI | TCCNGGA | 2 cut(s) | 21, 658 |
| PkrI | GCNGC | 3 cut(s) | 745, 1119, 1229 |
| PleI | GAGTC | 2 cut(s) | 1565, 1673 |
| PmaCI | CACGTG | 1 cut(s) | 1124 |
| PmlI | CACGTG | 1 cut(s) | 1124 |
| PpsI | GAGTC | 2 cut(s) | 1565, 1673 |
| Ppu21I | YACGTR | 1 cut(s) | 1124 |
| PpuMI | RGGWCCY | 1 cut(s) | 1042 |
| PshBI | ATTAAT | 2 cut(s) | 675, 893 |
| Psp1406I | AACGTT | 1 cut(s) | 321 |
| Psp5II | RGGWCCY | 1 cut(s) | 1042 |
| Psp6I | CCWGG | 6 cut(s) | 21, 354, 402, 658, 1381, 1752 |
| PspCI | CACGTG | 1 cut(s) | 1124 |
| PspEI | GGTNACC | 1 cut(s) | 406 |
| PspFI | CCCAGC | 2 cut(s) | 1038, 1371 |
| PspGI | CCWGG | 6 cut(s) | 21, 354, 402, 658, 1381, 1752 |
| PspN4I | GGNNCC | 5 cut(s) | 562, 753, 805, 1043, 1599 |
| PspPI | GGNCC | 7 cut(s) | 130, 1029, 1042, 1236, 1379, 1656, 1705 |
| PspPPI | RGGWCCY | 1 cut(s) | 1042 |
| PsuI | RGATCY | 5 cut(s) | 18, 184, 372, 1349, 1597 |
| PsyI | GACNNNGTC | 1 cut(s) | 404 |
| PvuII | CAGCTG | 1 cut(s) | 731 |
| RseI | CAYNNNNRTG | 4 cut(s) | 227, 260, 698, 1490 |
| SalI | GTCGAC | 2 cut(s) | 175, 269 |
| SapI | GCTCTTC | 1 cut(s) | 1473 |
| SaqAI | TTAA | 5 cut(s) | 675, 893, 972, 1197, 1296 |
| SatI | GCNGC | 3 cut(s) | 744, 1118, 1228 |
| Sau3AI | GATC | 8 cut(s) | 18, 184, 276, 372, 526, 1269, 1349, 1597 |
| Sau96I | GGNCC | 7 cut(s) | 130, 1029, 1042, 1236, 1379, 1656, 1705 |
| SchI | GAGTC | 2 cut(s) | 1566, 1673 |
| ScrFI | CCNGG | 9 cut(s) | 23, 140, 335, 356, 404, 476, 660, 1383, 1754 |
| SduI | GDGCHC | 2 cut(s) | 1096, 1129 |
| SexAI | ACCWGGT | 1 cut(s) | 402 |
| SfaNI | GCATC | 4 cut(s) | 201, 231, 544, 859 |
| SfuI | TTCGAA | 1 cut(s) | 1427 |
| SinI | GGWCC | 4 cut(s) | 1029, 1042, 1236, 1705 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 227, 260, 698, 1490 |
| SseBI | AGGCCT | 1 cut(s) | 934 |
| SsiI | CCGC | 8 cut(s) | 74, 167, 182, 344, 1117, 1334, 1377, 1566 |
| SspI | AATATT | 2 cut(s) | 993, 1522 |
| SspMI | CTAG | 5 cut(s) | 1244, 1286, 1412, 1605, 1686 |
| StuI | AGGCCT | 1 cut(s) | 934 |
| StyD4I | CCNGG | 9 cut(s) | 21, 138, 333, 354, 402, 474, 658, 1381, 1752 |
| StyI | CCWWGG | 7 cut(s) | 349, 376, 747, 799, 941, 1210, 1232 |
| TaaI | ACNGT | 3 cut(s) | 451, 626, 1591 |
| TaiI | ACGT | 6 cut(s) | 161, 324, 848, 952, 1126, 1364 |
| TaqI | TCGA | 6 cut(s) | 63, 176, 270, 279, 399, 1427 |
| TauI | GCSGC | 1 cut(s) | 1120 |
| TfiI | GAWTC | 4 cut(s) | 690, 898, 1070, 1355 |
| Tru1I | TTAA | 5 cut(s) | 675, 893, 972, 1197, 1296 |
| Tru9I | TTAA | 5 cut(s) | 675, 893, 972, 1197, 1296 |
| TscAI | CASTG | 3 cut(s) | 454, 601, 867 |
| TseFI | GTSAC | 5 cut(s) | 406, 431, 445, 1546, 1676 |
| TseI | GCWGC | 2 cut(s) | 743, 1227 |
| Tsp45I | GTSAC | 5 cut(s) | 406, 431, 445, 1546, 1676 |
| TspDTI | ATGAA | 6 cut(s) | 17, 682, 783, 911, 1074, 1102 |
| TspGWI | ACGGA | 3 cut(s) | 98, 506, 956 |
| TspRI | CASTG | 3 cut(s) | 454, 601, 867 |
| Tth111I | GACNNNGTC | 1 cut(s) | 404 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1038 |
| VneI | GTGCAC | 1 cut(s) | 1125 |
| VpaK11BI | GGWCC | 4 cut(s) | 1029, 1042, 1236, 1705 |
| VspI | ATTAAT | 2 cut(s) | 675, 893 |
| XapI | RAATTY | 4 cut(s) | 611, 792, 1193, 1202 |
| XbaI | TCTAGA | 1 cut(s) | 1411 |
| XceI | RCATGY | 1 cut(s) | 265 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1059 |
| XmiI | GTMKAC | 2 cut(s) | 176, 270 |
| XmnI | GAANNNNTTC | 2 cut(s) | 981, 1307 |
| XspI | CTAG | 5 cut(s) | 1244, 1286, 1412, 1605, 1686 |
| ZraI | GACGTC | 1 cut(s) | 950 |