Prupe.8G049300_v2.0.a1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0014188
Physical Location & Seq
Reverse (-)
5376140 .. 5377585
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G049300.1

Sequence Viewer

Length: 1329 bp
ATGCCCTCTGTCACTTGGGGTGTGGTCCAAGGCCGCAAAGAGAAGCTTGTCTCAAGGGTTATAATATGTGATTATTTAAAGAGCTTGGGCATAGTTCCTGATGAGTTAGAAAGCTTAGAGCTACCCTCTACTGTTGACGTCATGAGGGAGAGAGTTGAGTTCCTTCAGAAGCTAGGATTGTCCAGCGATGACATTAATGAGTACCCCTTGATGCTCGGATGTAGTGTGAGAAAAAATATGATACCTGTGTTGGCTTACTTGGAGAAAATTGGGATTCCAAGGTCGAAACTTGGTGAGTTTGTTAAAAATTACCCGCAAGTATTACATGCTAGTGTGGTTGTTGAGCTTGTGCCGGTTGTTAAGTTCCTTCGTGGGCTTGATGTGGAGAAGCAGGATATTGGCTATGTGCTGCAGAAGTATCCTGAGCTTCTCGGGTATAAACTTGAGGGGACAATGAGTACTTCAGTGGCATATTTTGTTAGCATTGGTGTTAATCCTAGGGATATAGGTCCGATGGTCACACAGTATCCTTACTTTTTGGGAATGAGAGTTGGGACTGTGATTAAGCCATTTGTTGATCTTTTGGTTTCCTTAGGCTTGCCAAAAAAGATTTTGGCTAGGATGTTGGAGAAGCGGGCATATTTACTTGGTTATGATCTTGAGGAGACTGTTAGACCAAATGTGGACTGTTTGATTAGTTTTGGGATCCGGAGGGAAGTGCTTGCTTCGGTTGTTGCTCAGTACCCCCAAATTCTTGGGCTGCCTTTAAAGGCCAAAATGTCCTCACAGCAGTATTTCTTTAGTTTGAAGCTTAAGATTGATCCTGAAGGATTTGCACGAGTGATAGAGAAGATGCCGCAGATTGTCAGCCTTCATCAACATGTGATAATGAAGCCAGTTGAGTTCCTTCTTGGACGGGGAATACCTTCTGAGGATGTTGCCAAGATGATTGTAAAGTGTCCCCAGTTAATTGCATTGCGTGTTGAGCTCATGAAGAATAGCTTTTACTTCTTTAAGAGTGAAATGGGTAGGCCACTGAAAGAGCTTGTGGAATTTCCGGAATACTTCACTTACAGCTTGGAATCCAGGATAAAACCTAGGTACCAGAGGTTGCAAAGCAAGGAGATCAGGTGTTCTTTGAAATGGTGCCTGAACTGTAGTGACCAGAGGTTTGAGGAGAGGTTGCAAGGGGAGTATATTGAAACAGAGACTCCAGGTCCATTATTTTGTATGGGTGGAAAGTTAGAGCTGCCTGGAAATGAAATGGTGTCAGATGAGGAAGATGAGAGTGATGACGAAGTACTTTACAGGCGCACTGTTTCACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

443

Amino Acids

50.52

Weight (kDa)

6.87

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014188)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G44020
fragaria_vesca FvH4_1g27350 FvH4_1g27350 FvH4_1g27350 FvH4_1g27350
malus_domestica MD07G1031000.v1.1
prunus_persica Prupe.8G049300_v2.0.a1
pyrus_communis pycom07g02260
rosa_chinensis RchiOBHm_Chr3g0488701
rosa_laevigata RLG00000022930
rosa_multiflora Rmu_sc0001208.1_g000078
rosa_samantha Rh3AG289100 Rh3BG325900 Rh3CG323400 Rh3DG321900
rosa_wichuraiana Rw0G013690 Rw3G025590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 62
AatII GACGTC 1 cut(s) 141
Acc65I GGTACC 1 cut(s) 1101
AccB1I GGYRCC 2 cut(s) 1101, 1146
AccIII TCCGGA 2 cut(s) 708, 1057
AciI CCGC 4 cut(s) 34, 314, 634, 857
AclWI GGATC 3 cut(s) 700, 713, 815
AcsI RAATTY 2 cut(s) 750, 1052
AcuI CTGAAG 3 cut(s) 149, 447, 846
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 5 cut(s) 203, 460, 743, 1103, 1302
AflII CTTAAG 1 cut(s) 812
AflIII ACRYGT 1 cut(s) 880
AgsI TTSAA 3 cut(s) 808, 1141, 1202
AhdI GACNNNNNGTC 1 cut(s) 1215
AjnI CCWGG 3 cut(s) 1085, 1213, 1252
Alw21I GWGCWC 1 cut(s) 990
Alw26I GTCTC 3 cut(s) 55, 659, 1202
AlwI GGATC 3 cut(s) 700, 713, 815
Ama87I CYCGRG 1 cut(s) 431
Aor13HI TCCGGA 2 cut(s) 708, 1057
AoxI GGCC 3 cut(s) 31, 771, 1031
ApeKI GCWGC 3 cut(s) 409, 760, 1249
ApoI RAATTY 2 cut(s) 750, 1052
ArsI GACNNNNNNTTYG 2 cut(s) 1154, 1186
AseI ATTAAT 1 cut(s) 195
Asp700I GAANNNNTTC 1 cut(s) 925
Asp718I GGTACC 1 cut(s) 1101
AspA2I CCTAGG 2 cut(s) 497, 1097
AspLEI GCGC 1 cut(s) 1314
AspS9I GGNCC 3 cut(s) 25, 509, 1217
AsuHPI GGTGA 1 cut(s) 305
AvaI CYCGRG 1 cut(s) 431
AvaII GGWCC 3 cut(s) 25, 509, 1217
AvrII CCTAGG 2 cut(s) 497, 1097
AxyI CCTNAGG 1 cut(s) 592
BaeI ACNNNNGTAYC 4 cut(s) 233, 266, 1085, 1118
BamHI GGATCC 1 cut(s) 705
BanI GGYRCC 2 cut(s) 1101, 1146
BanII GRGCYC 1 cut(s) 990
BauI CACGAG 1 cut(s) 837
Bbv12I GWGCWC 1 cut(s) 990
BbvI GCAGC 3 cut(s) 396, 747, 1236
BccI CCATC 1 cut(s) 508
BciT130I CCWGG 3 cut(s) 1087, 1215, 1254
BciVI GTATCC 2 cut(s) 429, 537
BcoDI GTCTC 3 cut(s) 55, 659, 1202
BfaI CTAG 5 cut(s) 173, 330, 498, 618, 1098
BfmI CTRYAG 2 cut(s) 410, 1156
BfrI CTTAAG 1 cut(s) 812
BfuI GTATCC 2 cut(s) 429, 537
BisI GCNGC 5 cut(s) 34, 410, 761, 857, 1250
BlnI CCTAGG 2 cut(s) 497, 1097
BlsI GCNGC 5 cut(s) 35, 411, 762, 858, 1251
BmcAI AGTACT 2 cut(s) 460, 1302
Bme1390I CCNGG 3 cut(s) 1087, 1215, 1254
Bme18I GGWCC 3 cut(s) 25, 509, 1217
BmeRI GACNNNNNGTC 1 cut(s) 1215
BmeT110I CYCGRG 1 cut(s) 431
BmgT120I GGNCC 3 cut(s) 25, 509, 1217
BmiI GGNNCC 3 cut(s) 707, 1103, 1148
BmrFI CCNGG 3 cut(s) 1087, 1215, 1254
BmrI ACTGGG 1 cut(s) 958
BmsI GCATC 2 cut(s) 201, 843
BmuI ACTGGG 1 cut(s) 958
BplI GAGNNNNNCTC 2 cut(s) 110, 142
BpmI CTGGAG 1 cut(s) 1197
Bpu10I CCTNAGC 1 cut(s) 423
BpuEI CTTGAG 3 cut(s) 37, 464, 680
BsaHI GRCGYC 1 cut(s) 138
BsaJI CCNNGG 4 cut(s) 28, 278, 497, 1097
BsaWI WCCGGW 2 cut(s) 708, 1057
BsaXI ACNNNNNCTCC 4 cut(s) 1115, 1145, 1195, 1225
Bse118I RCCGGY 1 cut(s) 352
Bse1I ACTGG 2 cut(s) 896, 964
Bse21I CCTNAGG 1 cut(s) 592
Bse3DI GCAATG 1 cut(s) 974
BseAI TCCGGA 2 cut(s) 708, 1057
BseBI CCWGG 3 cut(s) 1087, 1215, 1254
BseDI CCNNGG 4 cut(s) 28, 278, 497, 1097
BseGI GGATG 3 cut(s) 224, 627, 940
BseMI GCAATG 1 cut(s) 974
BseMII CTCAG 3 cut(s) 414, 752, 921
BseNI ACTGG 2 cut(s) 896, 964
BseRI GAGGAG 2 cut(s) 677, 1190
BseXI GCAGC 3 cut(s) 396, 747, 1236
BshFI GGCC 3 cut(s) 33, 773, 1033
BshNI GGYRCC 2 cut(s) 1101, 1146
BsiHKAI GWGCWC 1 cut(s) 990
BsiHKCI CYCGRG 1 cut(s) 431
BsiSI CCGG 3 cut(s) 353, 709, 1058
BslFI GGGAC 3 cut(s) 463, 568, 945
BsmAI GTCTC 3 cut(s) 55, 659, 1202
BsmFI GGGAC 3 cut(s) 463, 568, 945
BsnI GGCC 3 cut(s) 33, 773, 1033
BsoBI CYCGRG 1 cut(s) 431
Bsp1286I GDGCHC 1 cut(s) 990
Bsp13I TCCGGA 2 cut(s) 708, 1057
Bsp143I GATC 5 cut(s) 577, 655, 705, 820, 1125
BspACI CCGC 4 cut(s) 34, 314, 634, 857
BspANI GGCC 3 cut(s) 33, 773, 1033
BspCNI CTCAG 3 cut(s) 415, 751, 922
BspEI TCCGGA 2 cut(s) 708, 1057
BspHI TCATGA 2 cut(s) 141, 990
BspLI GGNNCC 3 cut(s) 707, 1103, 1148
BspMAI CTGCAG 1 cut(s) 414
BspPI GGATC 3 cut(s) 700, 713, 815
BspT107I GGYRCC 2 cut(s) 1101, 1146
BspTI CTTAAG 1 cut(s) 812
BsrDI GCAATG 1 cut(s) 974
BsrFI RCCGGY 1 cut(s) 352
BsrI ACTGG 2 cut(s) 896, 964
BssAI RCCGGY 1 cut(s) 352
BssECI CCNNGG 4 cut(s) 28, 278, 497, 1097
BssMI GATC 5 cut(s) 577, 655, 705, 820, 1125
BssNI GRCGYC 1 cut(s) 138
BssSI CACGAG 1 cut(s) 837
BssT1I CCWWGG 4 cut(s) 28, 278, 497, 1097
Bst2BI CACGAG 1 cut(s) 837
Bst2UI CCWGG 3 cut(s) 1087, 1215, 1254
Bst4CI ACNGT 8 cut(s) 133, 525, 559, 670, 689, 1157, 1318, 1326
BstACI GRCGYC 1 cut(s) 138
BstAFI CTTAAG 1 cut(s) 812
BstC8I GCNNGC 3 cut(s) 599, 636, 723
BstDEI CTNAG 5 cut(s) 115, 423, 592, 738, 930
BstF5I GGATG 3 cut(s) 224, 627, 940
BstHHI GCGC 1 cut(s) 1314
BstKTI GATC 5 cut(s) 580, 658, 708, 823, 1128
BstMAI GTCTC 3 cut(s) 55, 659, 1202
BstMBI GATC 5 cut(s) 577, 655, 705, 820, 1125
BstMWI GCNNNNNNNGC 1 cut(s) 985
BstNI CCWGG 3 cut(s) 1087, 1215, 1254
BstNSI RCATGY 2 cut(s) 329, 884
BstSCI CCNGG 3 cut(s) 1085, 1213, 1252
BstSFI CTRYAG 2 cut(s) 410, 1156
BstV1I GCAGC 3 cut(s) 396, 747, 1236
BstX2I RGATCY 1 cut(s) 705
BstXI CCANNNNNNTGG 1 cut(s) 755
BstYI RGATCY 1 cut(s) 705
Bsu36I CCTNAGG 1 cut(s) 592
BsuI GTATCC 2 cut(s) 429, 537
BsuRI GGCC 3 cut(s) 33, 773, 1033
BtgZI GCGATG 1 cut(s) 201
BtsCI GGATG 3 cut(s) 224, 627, 940
BtsIMutI CAGTG 4 cut(s) 471, 1034, 1314, 1322
Cac8I GCNNGC 3 cut(s) 599, 636, 723
CciI TCATGA 2 cut(s) 141, 990
CfoI GCGC 1 cut(s) 1314
Cfr10I RCCGGY 1 cut(s) 352
Cfr13I GGNCC 3 cut(s) 25, 509, 1217
Csp6I GTAC 5 cut(s) 202, 459, 742, 1102, 1301
CviAII CATG 4 cut(s) 142, 326, 881, 991
CviQI GTAC 5 cut(s) 202, 459, 742, 1102, 1301
DdeI CTNAG 5 cut(s) 115, 423, 592, 738, 930
DpnI GATC 5 cut(s) 579, 657, 707, 822, 1127
DpnII GATC 5 cut(s) 577, 655, 705, 820, 1125
DraI TTTAAA 2 cut(s) 78, 768
DriI GACNNNNNGTC 1 cut(s) 1215
Eam1105I GACNNNNNGTC 1 cut(s) 1215
Ecl136II GAGCTC 1 cut(s) 988
Eco130I CCWWGG 4 cut(s) 28, 278, 497, 1097
Eco24I GRGCYC 1 cut(s) 990
Eco47I GGWCC 3 cut(s) 25, 509, 1217
Eco53kI GAGCTC 1 cut(s) 988
Eco57I CTGAAG 3 cut(s) 149, 447, 846
Eco81I CCTNAGG 1 cut(s) 592
Eco88I CYCGRG 1 cut(s) 431
EcoICRI GAGCTC 1 cut(s) 988
EcoRII CCWGG 3 cut(s) 1085, 1213, 1252
EcoT14I CCWWGG 4 cut(s) 28, 278, 497, 1097
EcoT38I GRGCYC 1 cut(s) 990
ErhI CCWWGG 4 cut(s) 28, 278, 497, 1097
FaeI CATG 4 cut(s) 145, 329, 884, 994
FalI AAGNNNNNCTT 4 cut(s) 30, 62, 986, 1018
FaqI GGGAC 3 cut(s) 463, 568, 945
FatI CATG 4 cut(s) 141, 325, 880, 990
FauI CCCGC 2 cut(s) 321, 627
Fnu4HI GCNGC 5 cut(s) 34, 410, 761, 857, 1250
FokI GGATG 3 cut(s) 231, 634, 947
FriOI GRGCYC 1 cut(s) 990
Fsp4HI GCNGC 5 cut(s) 34, 410, 761, 857, 1250
FspBI CTAG 5 cut(s) 173, 330, 498, 618, 1098
GlaI GCGC 1 cut(s) 1313
GluI GCNGC 5 cut(s) 34, 410, 761, 857, 1250
GsuI CTGGAG 1 cut(s) 1197
HaeIII GGCC 3 cut(s) 33, 773, 1033
HapII CCGG 3 cut(s) 353, 709, 1058
HhaI GCGC 1 cut(s) 1314
Hin1I GRCGYC 1 cut(s) 138
Hin1II CATG 4 cut(s) 145, 329, 884, 994
Hin6I GCGC 1 cut(s) 1312
HinP1I GCGC 1 cut(s) 1312
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HindIII AAGCTT 3 cut(s) 44, 112, 809
HinfI GANTC 3 cut(s) 274, 1082, 1210
HpaII CCGG 3 cut(s) 353, 709, 1058
HphI GGTGA 1 cut(s) 305
Hpy166II GTNNAC 2 cut(s) 136, 685
Hpy188I TCNGA 5 cut(s) 168, 218, 513, 931, 1273
Hpy188III TCNNGA 8 cut(s) 98, 142, 422, 659, 709, 824, 991, 1058
Hpy8I GTNNAC 2 cut(s) 136, 685
HpyAV CCTTC 6 cut(s) 173, 377, 821, 881, 917, 936
HpyCH4III ACNGT 8 cut(s) 133, 525, 559, 670, 689, 1157, 1318, 1326
HpyCH4IV ACGT 1 cut(s) 138
HpyCH4V TGCA 5 cut(s) 412, 836, 974, 1114, 1186
HpyF10VI GCNNNNNNNGC 1 cut(s) 985
HpyF3I CTNAG 5 cut(s) 115, 423, 592, 738, 930
HpySE526I ACGT 1 cut(s) 138
Hsp92I GRCGYC 1 cut(s) 138
Hsp92II CATG 4 cut(s) 145, 329, 884, 994
HspAI GCGC 1 cut(s) 1312
Kpn2I TCCGGA 2 cut(s) 708, 1057
KpnI GGTACC 1 cut(s) 1105
Kzo9I GATC 5 cut(s) 577, 655, 705, 820, 1125
Lsp1109I GCAGC 3 cut(s) 396, 747, 1236
LweI GCATC 2 cut(s) 201, 843
MaeI CTAG 5 cut(s) 173, 330, 498, 618, 1098
MaeII ACGT 1 cut(s) 138
MaeIII GTNAC 3 cut(s) 10, 517, 1160
MalI GATC 5 cut(s) 579, 657, 707, 822, 1127
MboI GATC 5 cut(s) 577, 655, 705, 820, 1125
MboII GAAGA 3 cut(s) 862, 1006, 1292
MflI RGATCY 1 cut(s) 705
MhlI GDGCHC 1 cut(s) 990
MluCI AATT 5 cut(s) 267, 307, 750, 969, 1052
MlyI GAGTC 1 cut(s) 1204
MmeI TCCRAC 1 cut(s) 606
MroI TCCGGA 2 cut(s) 708, 1057
MroXI GAANNNNTTC 1 cut(s) 925
MslI CAYNNNNRTG 2 cut(s) 330, 879
MspCI CTTAAG 1 cut(s) 812
MspI CCGG 3 cut(s) 353, 709, 1058
MspR9I CCNGG 3 cut(s) 1087, 1215, 1254
MvaI CCWGG 3 cut(s) 1087, 1215, 1254
MwoI GCNNNNNNNGC 1 cut(s) 985
NdeII GATC 5 cut(s) 577, 655, 705, 820, 1125
NlaIII CATG 4 cut(s) 145, 329, 884, 994
NlaIV GGNNCC 3 cut(s) 707, 1103, 1148
NmuCI GTSAC 3 cut(s) 10, 517, 1160
NspI RCATGY 2 cut(s) 329, 884
PagI TCATGA 2 cut(s) 141, 990
PciI ACATGT 1 cut(s) 880
PdmI GAANNNNTTC 1 cut(s) 925
PfeI GAWTC 2 cut(s) 274, 1082
PfoI TCCNGGA 1 cut(s) 1085
PkrI GCNGC 5 cut(s) 35, 411, 762, 858, 1251
PleI GAGTC 1 cut(s) 1204
PpsI GAGTC 1 cut(s) 1204
PscI ACATGT 1 cut(s) 880
PshBI ATTAAT 1 cut(s) 195
PsiI TTATAA 1 cut(s) 62
Psp124BI GAGCTC 1 cut(s) 990
Psp6I CCWGG 3 cut(s) 1085, 1213, 1252
PspGI CCWGG 3 cut(s) 1085, 1213, 1252
PspN4I GGNNCC 3 cut(s) 707, 1103, 1148
PspPI GGNCC 3 cut(s) 25, 509, 1217
PstI CTGCAG 1 cut(s) 414
PsuI RGATCY 1 cut(s) 705
RsaI GTAC 5 cut(s) 203, 460, 743, 1103, 1302
RsaNI GTAC 5 cut(s) 202, 459, 742, 1102, 1301
RseI CAYNNNNRTG 2 cut(s) 330, 879
SacI GAGCTC 1 cut(s) 990
SatI GCNGC 5 cut(s) 34, 410, 761, 857, 1250
Sau3AI GATC 5 cut(s) 577, 655, 705, 820, 1125
Sau96I GGNCC 3 cut(s) 25, 509, 1217
ScaI AGTACT 2 cut(s) 460, 1302
SchI GAGTC 1 cut(s) 1204
ScrFI CCNGG 3 cut(s) 1087, 1215, 1254
SduI GDGCHC 1 cut(s) 990
SfaNI GCATC 2 cut(s) 201, 843
SfcI CTRYAG 2 cut(s) 410, 1156
SinI GGWCC 3 cut(s) 25, 509, 1217
SmiMI CAYNNNNRTG 2 cut(s) 330, 879
SmlI CTYRAG 4 cut(s) 52, 443, 659, 812
SmoI CTYRAG 4 cut(s) 52, 443, 659, 812
Sse9I AATT 5 cut(s) 267, 307, 750, 969, 1052
SsiI CCGC 4 cut(s) 34, 314, 634, 857
SspMI CTAG 5 cut(s) 173, 330, 498, 618, 1098
SstI GAGCTC 1 cut(s) 990
StyD4I CCNGG 3 cut(s) 1085, 1213, 1252
StyI CCWWGG 4 cut(s) 28, 278, 497, 1097
TaaI ACNGT 8 cut(s) 133, 525, 559, 670, 689, 1157, 1318, 1326
TaiI ACGT 1 cut(s) 141
TaqI TCGA 1 cut(s) 284
TasI AATT 5 cut(s) 267, 307, 750, 969, 1052
TatI WGTACW 2 cut(s) 458, 1300
TauI GCSGC 2 cut(s) 36, 859
TfiI GAWTC 2 cut(s) 274, 1082
TscAI CASTG 4 cut(s) 471, 1041, 1321, 1329
TseFI GTSAC 3 cut(s) 10, 517, 1160
TseI GCWGC 3 cut(s) 409, 760, 1249
Tsp45I GTSAC 3 cut(s) 10, 517, 1160
TspDTI ATGAA 4 cut(s) 863, 905, 1007, 1275
TspRI CASTG 4 cut(s) 471, 1041, 1321, 1329
Vha464I CTTAAG 1 cut(s) 812
VpaK11BI GGWCC 3 cut(s) 25, 509, 1217
VspI ATTAAT 1 cut(s) 195
XapI RAATTY 2 cut(s) 750, 1052
XceI RCATGY 2 cut(s) 329, 884
XmaJI CCTAGG 2 cut(s) 497, 1097
XmnI GAANNNNTTC 1 cut(s) 925
XspI CTAG 5 cut(s) 173, 330, 498, 618, 1098
ZraI GACGTC 1 cut(s) 139
ZrmI AGTACT 2 cut(s) 460, 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.