Prupe.8G066900_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0017372
Physical Location & Seq
Forward (+)
9880648 .. 9883376
2729 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G066900.1

Sequence Viewer

Length: 1116 bp
ATGGCTGCAACAGATCCAAAGTTCAATATCCACTACTCTTCACAAGTTCCCCATGATCAGCCAGCCAAACTGATGACCAGCATAAAAAAGCTTGTAGAATCACCAGGCATCACCTTCATCCCTCCCACTTATACCTACACAAACAATCCCCATGATGACCTGGCAGCTTTGATAGATACAGAGTCAACGATCCCCACCGTTGACTTTTCTCTCCTCACATCTGGCACTCCCGAACAGCGCTCCCAAGCCATCCATGACCTTGGCAAAGCCTGCCAGGACTGGGGCTTCTTCTTGGTGATCAATCATGGTGTGCCAGAGAGTCTGATGAAGGCGATCTTGGAAGGGGTACAAGGGTTTTTTGATCTGACGGAGGAGGAGAAGCACGAGTTTGAGGGGAAGCATGTACTGGATCCAATCAGGTGTGGGACCAGCTTCAATGCCTCGGTGGAGAAGGTGATGTTTTGGAGGGATTTTCTCAAGGTTTTTGTATATCCTGAGTTCCACTTCCCCACTAAACCTGCTGGCTTCAGTGAACTTGCATTAGAGTATTGCAAAAGAACGCGACAAGTGACAAGAGAACTCCTGAAAGGAATATCAGAGAGCTTGGGATTGGAAGCCAGCGACTTAGAGAAGTTCTTGAATGTTGAGTCAGGCTTGCAGATCTTCATTGCAAACCTTTATCCTCCATGTCCACAGCCAGAGCTTGCCTTGGGAATGCCACCTCATTCTGATCATGGCCTCTTGACCCTCCTTATACAAAATGGCATTAATGGTCTTCAAGTGCAACACAAGGGTAAATGGGTCAATGTCAATGCCATGCCCAACTCCTTCCTTGTTAACACTGGTGATCACCTGGAGATTTTTAGCAATGGGAAGTACAGGAGCAATATTCATCGAGCAGTGCTGACCAACAAAGCTACAAGAATATCCCTTGCCACTCCAACTGGTCCATCTCTTGAAACAGTAGTTACGCCTGCACCCGAGCTCATAAACAATGAAAACCGAAAGCCAGCATATATTGGGATGAAGTATAAAGATTACTTGGAGCTTCAACAAAGCAGCATGCTTGATGGCAAATCCATCTTGGATCGTGTACGGGTTTCGAACTCTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

372

Amino Acids

41.45

Weight (kDa)

5.82

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017372)

Species Orthologous Gene IDs
malus_domestica MD10G1053500.v1.1
prunus_persica Prupe.8G066900_v2.0.a1
pyrus_communis pycom10g04050
rosa_chinensis RchiOBHm_Chr6g0271361
rosa_laevigata RLG00000013727
rosa_multiflora Rmu_sc0004866.1_g000028
rosa_roxburghii Rroxscaffold_7G00197070
rosa_rugosa Rorug06G0060500
rosa_samantha Rh6AG179600 Rh6BG182600 Rh6CG179500 Rh6DG171200
rosa_wichuraiana Rw6G015440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 526
AccII CGCG 1 cut(s) 562
AclWI GGATC 5 cut(s) 8, 184, 404, 417, 1095
AcuI CTGAAG 1 cut(s) 511
AfaI GTAC 4 cut(s) 348, 405, 878, 1095
AfeI AGCGCT 1 cut(s) 239
AfiI CCNNNNNNNGG 1 cut(s) 280
AgsI TTSAA 6 cut(s) 25, 436, 640, 779, 959, 1052
AjnI CCWGG 4 cut(s) 103, 159, 273, 852
AjuI GAANNNNNNNTTGG 2 cut(s) 320, 352
AluBI AGCT 8 cut(s) 91, 167, 432, 603, 703, 917, 985, 1048
AluI AGCT 8 cut(s) 91, 167, 432, 603, 703, 917, 985, 1048
Alw21I GWGCWC 1 cut(s) 987
AlwI GGATC 5 cut(s) 8, 184, 404, 417, 1095
Ama87I CYCGRG 1 cut(s) 980
Aor51HI AGCGCT 1 cut(s) 239
AoxI GGCC 1 cut(s) 736
ApeKI GCWGC 3 cut(s) 5, 164, 1059
AseI ATTAAT 1 cut(s) 768
AspLEI GCGC 1 cut(s) 240
AspS9I GGNCC 2 cut(s) 426, 947
AsuHPI GGTGA 6 cut(s) 93, 103, 307, 466, 842, 857
AsuII TTCGAA 1 cut(s) 1103
AvaI CYCGRG 1 cut(s) 980
AvaII GGWCC 2 cut(s) 426, 947
BaeI ACNNNNGTAYC 2 cut(s) 338, 371
BamHI GGATCC 1 cut(s) 409
BanII GRGCYC 1 cut(s) 987
BauI CACGAG 1 cut(s) 383
BbsI GAAGAC 1 cut(s) 767
Bbv12I GWGCWC 1 cut(s) 987
BbvI GCAGC 2 cut(s) 176, 1071
BccI CCATC 4 cut(s) 257, 958, 1064, 1088
BciT130I CCWGG 4 cut(s) 105, 161, 275, 854
BclI TGATCA 4 cut(s) 55, 297, 730, 847
BfoI RGCGCY 1 cut(s) 241
BfuAI ACCTGC 1 cut(s) 526
BglII AGATCT 1 cut(s) 660
BisI GCNGC 3 cut(s) 6, 165, 1060
BlsI GCNGC 3 cut(s) 7, 166, 1061
Bme1390I CCNGG 4 cut(s) 105, 161, 275, 854
Bme18I GGWCC 2 cut(s) 426, 947
BmeT110I CYCGRG 1 cut(s) 980
BmgT120I GGNCC 2 cut(s) 426, 947
BmiI GGNNCC 2 cut(s) 411, 427
BmrFI CCNGG 4 cut(s) 105, 161, 275, 854
BmrI ACTGGG 1 cut(s) 289
BmsI GCATC 1 cut(s) 117
BmuI ACTGGG 1 cut(s) 289
BpiI GAAGAC 1 cut(s) 767
BpmI CTGGAG 1 cut(s) 875
Bpu14I TTCGAA 1 cut(s) 1103
BpuEI CTTGAG 1 cut(s) 461
BsaJI CCNNGG 3 cut(s) 259, 441, 708
Bsc4I CCNNNNNNNGG 1 cut(s) 280
Bse1I ACTGG 4 cut(s) 284, 411, 847, 949
Bse3DI GCAATG 2 cut(s) 666, 874
BseBI CCWGG 4 cut(s) 105, 161, 275, 854
BseDI CCNNGG 3 cut(s) 259, 441, 708
BseGI GGATG 3 cut(s) 117, 249, 1029
BseLI CCNNNNNNNGG 1 cut(s) 280
BseMI GCAATG 2 cut(s) 666, 874
BseMII CTCAG 1 cut(s) 486
BseNI ACTGG 4 cut(s) 284, 411, 847, 949
BseRI GAGGAG 3 cut(s) 203, 386, 389
BseXI GCAGC 2 cut(s) 176, 1071
BsgI GTGCAG 1 cut(s) 960
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 1 cut(s) 738
BsiHKAI GWGCWC 1 cut(s) 987
BsiHKCI CYCGRG 1 cut(s) 980
BslFI GGGAC 1 cut(s) 439
BslI CCNNNNNNNGG 1 cut(s) 280
BsmFI GGGAC 1 cut(s) 439
BsmI GAATGC 1 cut(s) 720
BsnI GGCC 1 cut(s) 738
BsoBI CYCGRG 1 cut(s) 980
Bsp119I TTCGAA 1 cut(s) 1103
Bsp1286I GDGCHC 1 cut(s) 987
BspANI GGCC 1 cut(s) 738
BspCNI CTCAG 1 cut(s) 487
BspFNI CGCG 1 cut(s) 562
BspLI GGNNCC 2 cut(s) 411, 427
BspMI ACCTGC 1 cut(s) 526
BspPI GGATC 5 cut(s) 8, 184, 404, 417, 1095
BspT104I TTCGAA 1 cut(s) 1103
BsrDI GCAATG 2 cut(s) 666, 874
BsrI ACTGG 4 cut(s) 284, 411, 847, 949
BssECI CCNNGG 3 cut(s) 259, 441, 708
BssSI CACGAG 1 cut(s) 383
BssT1I CCWWGG 2 cut(s) 259, 708
Bst2BI CACGAG 1 cut(s) 383
Bst2UI CCWGG 4 cut(s) 105, 161, 275, 854
Bst4CI ACNGT 2 cut(s) 199, 964
Bst6I CTCTTC 1 cut(s) 43
BstAPI GCANNNNNTGC 1 cut(s) 270
BstBI TTCGAA 1 cut(s) 1103
BstC8I GCNNGC 9 cut(s) 63, 271, 523, 619, 656, 705, 975, 1011, 1064
BstDEI CTNAG 2 cut(s) 495, 625
BstF5I GGATG 3 cut(s) 117, 249, 1029
BstFNI CGCG 1 cut(s) 562
BstH2I RGCGCY 1 cut(s) 241
BstHHI GCGC 1 cut(s) 240
BstMWI GCNNNNNNNGC 1 cut(s) 270
BstNI CCWGG 4 cut(s) 105, 161, 275, 854
BstNSI RCATGY 2 cut(s) 404, 1066
BstSCI CCNGG 4 cut(s) 103, 159, 273, 852
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 2 cut(s) 176, 1071
BstV2I GAAGAC 1 cut(s) 767
BstX2I RGATCY 3 cut(s) 13, 409, 660
BstXI CCANNNNNNTGG 1 cut(s) 260
BstYI RGATCY 3 cut(s) 13, 409, 660
BsuRI GGCC 1 cut(s) 738
BtsCI GGATG 3 cut(s) 117, 249, 1029
BtsI GCAGTG 1 cut(s) 906
BtsIMutI CAGTG 3 cut(s) 535, 840, 906
BveI ACCTGC 1 cut(s) 526
Cac8I GCNNGC 9 cut(s) 63, 271, 523, 619, 656, 705, 975, 1011, 1064
CfoI GCGC 1 cut(s) 240
Cfr13I GGNCC 2 cut(s) 426, 947
Csp6I GTAC 4 cut(s) 347, 404, 877, 1094
CviAII CATG 9 cut(s) 53, 152, 254, 305, 401, 687, 734, 817, 1063
CviQI GTAC 4 cut(s) 347, 404, 877, 1094
DdeI CTNAG 2 cut(s) 495, 625
Eam1104I CTCTTC 1 cut(s) 43
EarI CTCTTC 1 cut(s) 43
Ecl136II GAGCTC 1 cut(s) 985
Eco130I CCWWGG 2 cut(s) 259, 708
Eco24I GRGCYC 1 cut(s) 987
Eco47I GGWCC 2 cut(s) 426, 947
Eco47III AGCGCT 1 cut(s) 239
Eco53kI GAGCTC 1 cut(s) 985
Eco57I CTGAAG 1 cut(s) 511
Eco88I CYCGRG 1 cut(s) 980
EcoICRI GAGCTC 1 cut(s) 985
EcoRII CCWGG 4 cut(s) 103, 159, 273, 852
EcoT14I CCWWGG 2 cut(s) 259, 708
EcoT38I GRGCYC 1 cut(s) 987
ErhI CCWWGG 2 cut(s) 259, 708
FaeI CATG 9 cut(s) 56, 155, 257, 308, 404, 690, 737, 820, 1066
FalI AAGNNNNNCTT 2 cut(s) 320, 352
FaqI GGGAC 1 cut(s) 439
FatI CATG 9 cut(s) 52, 151, 253, 304, 400, 686, 733, 816, 1062
FbaI TGATCA 4 cut(s) 55, 297, 730, 847
Fnu4HI GCNGC 3 cut(s) 6, 165, 1060
FokI GGATG 3 cut(s) 104, 236, 1036
FriOI GRGCYC 1 cut(s) 987
Fsp4HI GCNGC 3 cut(s) 6, 165, 1060
GlaI GCGC 1 cut(s) 239
GluI GCNGC 3 cut(s) 6, 165, 1060
GsuI CTGGAG 1 cut(s) 875
HaeII RGCGCY 1 cut(s) 241
HaeIII GGCC 1 cut(s) 738
HhaI GCGC 1 cut(s) 240
Hin1II CATG 9 cut(s) 56, 155, 257, 308, 404, 690, 737, 820, 1066
Hin6I GCGC 1 cut(s) 238
HinP1I GCGC 1 cut(s) 238
HincII GTYRAC 3 cut(s) 186, 202, 838
HindII GTYRAC 3 cut(s) 186, 202, 838
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 4 cut(s) 98, 182, 319, 647
HpaI GTTAAC 1 cut(s) 838
HphI GGTGA 6 cut(s) 93, 103, 307, 466, 842, 857
Hpy166II GTNNAC 6 cut(s) 186, 202, 533, 692, 838, 1094
Hpy188I TCNGA 5 cut(s) 324, 366, 598, 730, 1111
Hpy188III TCNNGA 6 cut(s) 230, 494, 583, 637, 742, 956
Hpy8I GTNNAC 6 cut(s) 186, 202, 533, 692, 838, 1094
HpyAV CCTTC 5 cut(s) 124, 322, 335, 445, 838
HpyCH4III ACNGT 2 cut(s) 199, 964
HpyCH4V TGCA 7 cut(s) 8, 539, 552, 658, 671, 784, 977
HpyF10VI GCNNNNNNNGC 1 cut(s) 270
HpyF3I CTNAG 2 cut(s) 495, 625
Hsp92II CATG 9 cut(s) 56, 155, 257, 308, 404, 690, 737, 820, 1066
HspAI GCGC 1 cut(s) 238
Ksp22I TGATCA 4 cut(s) 55, 297, 730, 847
KspAI GTTAAC 1 cut(s) 838
LmnI GCTCC 3 cut(s) 245, 882, 1045
Lsp1109I GCAGC 2 cut(s) 176, 1071
LweI GCATC 1 cut(s) 117
MaeIII GTNAC 2 cut(s) 568, 967
MboII GAAGA 4 cut(s) 30, 280, 655, 767
MflI RGATCY 3 cut(s) 13, 409, 660
MhlI GDGCHC 1 cut(s) 987
MlyI GAGTC 3 cut(s) 191, 328, 656
MmeI TCCRAC 1 cut(s) 965
MseI TTAA 2 cut(s) 768, 837
MspR9I CCNGG 4 cut(s) 105, 161, 275, 854
Mva1269I GAATGC 1 cut(s) 720
MvaI CCWGG 4 cut(s) 105, 161, 275, 854
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 1 cut(s) 270
NlaIII CATG 9 cut(s) 56, 155, 257, 308, 404, 690, 737, 820, 1066
NlaIV GGNNCC 2 cut(s) 411, 427
NmuCI GTSAC 1 cut(s) 568
NspI RCATGY 2 cut(s) 404, 1066
NspV TTCGAA 1 cut(s) 1103
PaeI GCATGC 1 cut(s) 1066
PctI GAATGC 1 cut(s) 720
PfeI GAWTC 1 cut(s) 98
PkrI GCNGC 3 cut(s) 7, 166, 1061
PleI GAGTC 3 cut(s) 190, 327, 655
PpsI GAGTC 3 cut(s) 190, 327, 655
PshBI ATTAAT 1 cut(s) 768
Psp124BI GAGCTC 1 cut(s) 987
Psp6I CCWGG 4 cut(s) 103, 159, 273, 852
PspGI CCWGG 4 cut(s) 103, 159, 273, 852
PspN4I GGNNCC 2 cut(s) 411, 427
PspPI GGNCC 2 cut(s) 426, 947
PsuI RGATCY 3 cut(s) 13, 409, 660
RsaI GTAC 4 cut(s) 348, 405, 878, 1095
RsaNI GTAC 4 cut(s) 347, 404, 877, 1094
SacI GAGCTC 1 cut(s) 987
SaqAI TTAA 2 cut(s) 768, 837
SatI GCNGC 3 cut(s) 6, 165, 1060
Sau96I GGNCC 2 cut(s) 426, 947
SchI GAGTC 3 cut(s) 191, 328, 656
ScrFI CCNGG 4 cut(s) 105, 161, 275, 854
SduI GDGCHC 1 cut(s) 987
SfaNI GCATC 1 cut(s) 117
SfuI TTCGAA 1 cut(s) 1103
SinI GGWCC 2 cut(s) 426, 947
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
SphI GCATGC 1 cut(s) 1066
SspI AATATT 1 cut(s) 889
SstI GAGCTC 1 cut(s) 987
StyD4I CCNGG 4 cut(s) 103, 159, 273, 852
StyI CCWWGG 2 cut(s) 259, 708
TaaI ACNGT 2 cut(s) 199, 964
TaqI TCGA 2 cut(s) 895, 1103
TatI WGTACW 2 cut(s) 403, 876
TfiI GAWTC 1 cut(s) 98
Tru1I TTAA 2 cut(s) 768, 837
Tru9I TTAA 2 cut(s) 768, 837
TscAI CASTG 3 cut(s) 535, 847, 906
TseFI GTSAC 1 cut(s) 568
TseI GCWGC 3 cut(s) 5, 164, 1059
Tsp45I GTSAC 1 cut(s) 568
TspDTI ATGAA 6 cut(s) 106, 341, 655, 881, 1011, 1040
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 3 cut(s) 535, 847, 906
VpaK11BI GGWCC 2 cut(s) 426, 947
VspI ATTAAT 1 cut(s) 768
XceI RCATGY 2 cut(s) 404, 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.