Prupe.8G070500_v2.0.a1

Belongs to the FBPase class 1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
10340602 .. 10343542
2941 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G070500.1

Sequence Viewer

Length: 1221 bp
ATGCCATTACCCACAACCATAACACCACCATCCTTGTGCCCTGCTCCAATCTTCCCTCCAAATCACCCCCATTTCCCGCCAAGACACCAGTTTCCTCCGAGACCCATCTTTCACAGGCCAAGAATGGCAACTCTTTCTGGGTTCATTGCTGGGTCACAACTTGTGGGTTCTTCAGGCAGTGGTGGTGGTGGTGATAATGAGGCCCGCACTCTGATTGAGTATGTGGGCGGCGGAGGTGTCGATGTGGGCGATGATCTTGTGCTTTTAATCCATCACTTACAGTACGCCTGCAAGAAAATCGCAGCTCTTGTGGCCTCTCCTTTCAATTCTACCCTTGGGAAGCATACGAGTTTTGCTGCCGGCGCCGGCGGTTCGGCCGGTGGGTCAGGCAGGGATGCACCGAAACCGCTTGATATTGTTTCGAATGAAATCATCTTGTCGTCACTTAGAAGTTCTGGGAAGGTAGCTGTCATGGCATCGGAAGAAGATGACACTCCAACTTGGATACGTGATGATGGCCCATTTGTGGTGGTAACAGATCCTCTAGATGGTTCGAGAAATATTGACGCATCCATTCCCACTGGGACGATTTTTGGGATTTATCGACGCCTTGAGGAACTGGATCATCTACCAACAGAGGAGAAGGCTTTGCTGAATTCACTCCAGACTGGAACTAGGCTTGTAGCTTCTGGTTATGTTCTTTATTCATCAGCCACGATATTCTGCACCAGCTTTGGTTCAGGAACACATGCATTTACATTGGATCATTCCACGGGAGATTTCATTCTCACACACCCAAGCTTAAAAATTCCTTCTCGAGGGCAAATATATTCTGTAAATGATGCTCGATATTTTGACTGGCCCGACGGATTAAGACTCTACATAGACACTGTGAGACAAGGAAAAGGCAGGTATCCCAAAAAGTACTCTGCCCGTTATATCTGTTCTCTGGTAGCTGATTTTCATCGAACACTACTGTATGGTGGAGTTACAATGAATCCAAGAGACCATCTTCGTCTCGTGTACGAGGCCAACCCACTCAGCTTTCTGGTGGAGCAAGCTGGGGGCAAAGGTTCTGATGGTAAATATAGAATTCTTTCAATTCAGCCAGTGAAGCTGCATCAAAGGCTGCCTCTGTTTTTGGGAAGTTGTGAGGACATGGAAGAGTTAGAGAGTTATGGAAATGTGCAACAGAAAGTGAACCCTGGATATGAGGTCTGA

Protein Analysis

407

Amino Acids

43.99

Weight (kDa)

6.53

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016570)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G64380
fragaria_vesca FvH4_2g11590
malus_domestica MD05G1048200.v1.1
prunus_persica Prupe.8G070500_v2.0.a1
pyrus_communis pycom05g03990
rosa_chinensis RchiOBHm_Chr6g0270781
rosa_laevigata RLG00000013769
rosa_multiflora Rmu_sc0000642.1_g000021
rosa_roxburghii Rroxscaffold_7G00197600
rosa_rugosa Rorug06G0056600
rosa_samantha Rh6AG175800 Rh6BG179000 Rh6DG167600
rosa_wichuraiana Rw6G014970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 900
AccB1I GGYRCC 1 cut(s) 362
AciI CCGC 6 cut(s) 77, 205, 228, 231, 369, 407
AclWI GGATC 3 cut(s) 533, 630, 771
AcoI YGGCCR 1 cut(s) 375
AcsI RAATTY 3 cut(s) 655, 807, 1092
AcuI CTGAAG 1 cut(s) 156
AcyI GRCGYC 2 cut(s) 363, 607
AfaI GTAC 3 cut(s) 284, 926, 1025
AfiI CCNNNNNNNGG 3 cut(s) 526, 548, 818
AgsI TTSAA 2 cut(s) 325, 1101
AjnI CCWGG 1 cut(s) 1204
AluBI AGCT 9 cut(s) 305, 467, 686, 732, 801, 956, 1044, 1061, 1117
AluI AGCT 9 cut(s) 305, 467, 686, 732, 801, 956, 1044, 1061, 1117
Alw26I GTCTC 4 cut(s) 94, 889, 999, 1022
AlwI GGATC 3 cut(s) 533, 630, 771
Ama87I CYCGRG 1 cut(s) 816
AoxI GGCC 7 cut(s) 116, 201, 312, 375, 517, 860, 1029
ApeKI GCWGC 4 cut(s) 302, 356, 1117, 1129
ApoI RAATTY 3 cut(s) 655, 807, 1092
Asp700I GAANNNNTTC 1 cut(s) 1096
AspLEI GCGC 1 cut(s) 365
AspS9I GGNCC 3 cut(s) 202, 518, 861
AsuHPI GGTGA 2 cut(s) 56, 203
AsuII TTCGAA 1 cut(s) 422
AvaI CYCGRG 1 cut(s) 816
BaeGI GKGCMC 1 cut(s) 41
BanI GGYRCC 1 cut(s) 362
BauI CACGAG 1 cut(s) 1019
BbvI GCAGC 4 cut(s) 314, 343, 1104, 1116
BccI CCATC 7 cut(s) 37, 113, 279, 509, 542, 1017, 1073
BcgI CGANNNNNNTGC 2 cut(s) 280, 314
BciT130I CCWGG 1 cut(s) 1206
BciVI GTATCC 2 cut(s) 498, 924
BcoDI GTCTC 4 cut(s) 94, 889, 999, 1022
BfaI CTAG 2 cut(s) 545, 675
BfoI RGCGCY 1 cut(s) 366
BfuAI ACCTGC 1 cut(s) 900
BfuI GTATCC 2 cut(s) 498, 924
BisI GCNGC 5 cut(s) 229, 303, 357, 1118, 1130
BlsI GCNGC 5 cut(s) 230, 304, 358, 1119, 1131
BmcAI AGTACT 1 cut(s) 926
Bme1390I CCNGG 1 cut(s) 1206
BmeT110I CYCGRG 1 cut(s) 816
BmgT120I GGNCC 3 cut(s) 202, 518, 861
BmiI GGNNCC 1 cut(s) 364
BmrFI CCNGG 1 cut(s) 1206
BmrI ACTGGG 1 cut(s) 591
BmsI GCATC 5 cut(s) 385, 485, 578, 832, 1129
BmuI ACTGGG 1 cut(s) 591
BpmI CTGGAG 1 cut(s) 647
Bpu14I TTCGAA 1 cut(s) 422
BpuEI CTTGAG 1 cut(s) 632
BsaAI YACGTR 1 cut(s) 509
BsaBI GATNNNNATC 1 cut(s) 963
BsaHI GRCGYC 2 cut(s) 363, 607
BsaI GGTCTC 2 cut(s) 94, 999
BsaJI CCNNGG 3 cut(s) 334, 771, 1204
Bsc4I CCNNNNNNNGG 3 cut(s) 526, 548, 818
Bse118I RCCGGY 3 cut(s) 359, 365, 377
Bse1I ACTGG 6 cut(s) 88, 586, 624, 673, 863, 1109
Bse3DI GCAATG 1 cut(s) 144
Bse8I GATNNNNATC 1 cut(s) 963
BseBI CCWGG 1 cut(s) 1206
BseDI CCNNGG 3 cut(s) 334, 771, 1204
BseGI GGATG 3 cut(s) 29, 400, 569
BseJI GATNNNNATC 1 cut(s) 963
BseLI CCNNNNNNNGG 3 cut(s) 526, 548, 818
BseMI GCAATG 1 cut(s) 144
BseMII CTCAG 1 cut(s) 1054
BseNI ACTGG 6 cut(s) 88, 586, 624, 673, 863, 1109
BseRI GAGGAG 1 cut(s) 653
BseSI GKGCMC 1 cut(s) 41
BseX3I CGGCCG 1 cut(s) 375
BseXI GCAGC 4 cut(s) 314, 343, 1104, 1116
BseYI CCCAGC 2 cut(s) 149, 1061
BsgI GTGCAG 1 cut(s) 709
Bsh1285I CGRYCG 1 cut(s) 378
BshFI GGCC 7 cut(s) 118, 203, 314, 377, 519, 862, 1031
BshNI GGYRCC 1 cut(s) 362
BsiEI CGRYCG 1 cut(s) 378
BsiHKCI CYCGRG 1 cut(s) 816
BsiSI CCGG 3 cut(s) 360, 366, 378
BslFI GGGAC 1 cut(s) 598
BslI CCNNNNNNNGG 3 cut(s) 526, 548, 818
BsmAI GTCTC 4 cut(s) 94, 889, 999, 1022
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 1 cut(s) 598
BsnI GGCC 7 cut(s) 118, 203, 314, 377, 519, 862, 1031
Bso31I GGTCTC 2 cut(s) 94, 999
BsoBI CYCGRG 1 cut(s) 816
Bsp119I TTCGAA 1 cut(s) 422
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 4 cut(s) 253, 538, 622, 763
BspACI CCGC 6 cut(s) 77, 205, 228, 231, 369, 407
BspANI GGCC 7 cut(s) 118, 203, 314, 377, 519, 862, 1031
BspCNI CTCAG 1 cut(s) 1053
BspLI GGNNCC 1 cut(s) 364
BspMI ACCTGC 1 cut(s) 900
BspPI GGATC 3 cut(s) 533, 630, 771
BspT104I TTCGAA 1 cut(s) 422
BspT107I GGYRCC 1 cut(s) 362
BspTNI GGTCTC 2 cut(s) 94, 999
BsrDI GCAATG 1 cut(s) 144
BsrFI RCCGGY 3 cut(s) 359, 365, 377
BsrI ACTGG 6 cut(s) 88, 586, 624, 673, 863, 1109
BssAI RCCGGY 3 cut(s) 359, 365, 377
BssECI CCNNGG 3 cut(s) 334, 771, 1204
BssMI GATC 4 cut(s) 253, 538, 622, 763
BssNI GRCGYC 2 cut(s) 363, 607
BssSI CACGAG 1 cut(s) 1019
BssT1I CCWWGG 1 cut(s) 334
Bst2BI CACGAG 1 cut(s) 1019
Bst2UI CCWGG 1 cut(s) 1206
Bst4CI ACNGT 3 cut(s) 282, 892, 978
Bst6I CTCTTC 1 cut(s) 1158
BstACI GRCGYC 2 cut(s) 363, 607
BstBAI YACGTR 1 cut(s) 509
BstBI TTCGAA 1 cut(s) 422
BstC8I GCNNGC 5 cut(s) 205, 289, 361, 367, 1059
BstDEI CTNAG 2 cut(s) 446, 1040
BstDSI CCRYGG 1 cut(s) 771
BstENI CCTNNNNNAGG 1 cut(s) 816
BstF5I GGATG 3 cut(s) 29, 400, 569
BstH2I RGCGCY 1 cut(s) 366
BstHHI GCGC 1 cut(s) 365
BstKTI GATC 4 cut(s) 256, 541, 625, 766
BstMAI GTCTC 4 cut(s) 94, 889, 999, 1022
BstMBI GATC 4 cut(s) 253, 538, 622, 763
BstMCI CGRYCG 1 cut(s) 378
BstMWI GCNNNNNNNGC 5 cut(s) 311, 362, 473, 1114, 1126
BstNI CCWGG 1 cut(s) 1206
BstNSI RCATGY 1 cut(s) 752
BstSCI CCNGG 1 cut(s) 1204
BstSLI GKGCMC 1 cut(s) 41
BstV1I GCAGC 4 cut(s) 314, 343, 1104, 1116
BstX2I RGATCY 1 cut(s) 538
BstYI RGATCY 1 cut(s) 538
BstZI CGGCCG 1 cut(s) 375
BsuI GTATCC 2 cut(s) 498, 924
BsuRI GGCC 7 cut(s) 118, 203, 314, 377, 519, 862, 1031
BtgI CCRYGG 1 cut(s) 771
BtgZI GCGATG 1 cut(s) 264
BtsCI GGATG 3 cut(s) 29, 400, 569
BtsI GCAGTG 1 cut(s) 184
BtsIMutI CAGTG 4 cut(s) 184, 579, 888, 1116
BveI ACCTGC 1 cut(s) 900
Cac8I GCNNGC 5 cut(s) 205, 289, 361, 367, 1059
CfoI GCGC 1 cut(s) 365
Cfr10I RCCGGY 3 cut(s) 359, 365, 377
Cfr13I GGNCC 3 cut(s) 202, 518, 861
CseI GACGC 2 cut(s) 575, 615
Csp6I GTAC 3 cut(s) 283, 925, 1024
CspCI CAANNNNNGTGG 2 cut(s) 15, 50
CviAII CATG 3 cut(s) 472, 749, 1159
CviQI GTAC 3 cut(s) 283, 925, 1024
DdeI CTNAG 2 cut(s) 446, 1040
DinI GGCGCC 1 cut(s) 364
DpnI GATC 4 cut(s) 255, 540, 624, 765
DpnII GATC 4 cut(s) 253, 538, 622, 763
EaeI YGGCCR 1 cut(s) 375
EagI CGGCCG 1 cut(s) 375
Eam1104I CTCTTC 1 cut(s) 1158
EarI CTCTTC 1 cut(s) 1158
EciI GGCGGA 1 cut(s) 246
EclXI CGGCCG 1 cut(s) 375
Eco130I CCWWGG 1 cut(s) 334
Eco31I GGTCTC 2 cut(s) 94, 999
Eco52I CGGCCG 1 cut(s) 375
Eco57I CTGAAG 1 cut(s) 156
Eco88I CYCGRG 1 cut(s) 816
EcoNI CCTNNNNNAGG 1 cut(s) 816
EcoRI GAATTC 2 cut(s) 655, 1092
EcoRII CCWGG 1 cut(s) 1204
EcoT14I CCWWGG 1 cut(s) 334
EcoT22I ATGCAT 1 cut(s) 754
EgeI GGCGCC 1 cut(s) 364
EheI GGCGCC 1 cut(s) 364
ErhI CCWWGG 1 cut(s) 334
Esp3I CGTCTC 1 cut(s) 1022
FaeI CATG 3 cut(s) 475, 752, 1162
FaqI GGGAC 1 cut(s) 598
FatI CATG 3 cut(s) 471, 748, 1158
FauI CCCGC 2 cut(s) 84, 212
Fnu4HI GCNGC 5 cut(s) 229, 303, 357, 1118, 1130
FokI GGATG 3 cut(s) 16, 407, 556
Fsp4HI GCNGC 5 cut(s) 229, 303, 357, 1118, 1130
FspBI CTAG 2 cut(s) 545, 675
GlaI GCGC 1 cut(s) 364
GluI GCNGC 5 cut(s) 229, 303, 357, 1118, 1130
GsaI CCCAGC 2 cut(s) 153, 1065
GsuI CTGGAG 1 cut(s) 647
HaeII RGCGCY 1 cut(s) 366
HaeIII GGCC 7 cut(s) 118, 203, 314, 377, 519, 862, 1031
HapII CCGG 3 cut(s) 360, 366, 378
HgaI GACGC 2 cut(s) 575, 615
HhaI GCGC 1 cut(s) 365
Hin1I GRCGYC 2 cut(s) 363, 607
Hin1II CATG 3 cut(s) 475, 752, 1162
Hin6I GCGC 1 cut(s) 363
HinP1I GCGC 1 cut(s) 363
HindIII AAGCTT 1 cut(s) 799
HinfI GANTC 2 cut(s) 876, 997
HpaII CCGG 3 cut(s) 360, 366, 378
HphI GGTGA 2 cut(s) 56, 203
Hpy166II GTNNAC 2 cut(s) 1024, 1201
Hpy188I TCNGA 5 cut(s) 99, 213, 481, 1078, 1220
Hpy188III TCNNGA 5 cut(s) 545, 555, 664, 741, 816
Hpy8I GTNNAC 2 cut(s) 1024, 1201
Hpy99I CGWCG 2 cut(s) 609, 869
HpyAV CCTTC 3 cut(s) 454, 637, 822
HpyCH4III ACNGT 3 cut(s) 282, 892, 978
HpyCH4IV ACGT 1 cut(s) 508
HpyCH4V TGCA 6 cut(s) 291, 398, 726, 752, 1120, 1189
HpyF10VI GCNNNNNNNGC 5 cut(s) 311, 362, 473, 1114, 1126
HpyF3I CTNAG 2 cut(s) 446, 1040
HpySE526I ACGT 1 cut(s) 508
Hsp92I GRCGYC 2 cut(s) 363, 607
Hsp92II CATG 3 cut(s) 475, 752, 1162
HspAI GCGC 1 cut(s) 363
KasI GGCGCC 1 cut(s) 362
KroI GCCGGC 2 cut(s) 359, 365
KroNI GCCGGC 2 cut(s) 361, 367
Kzo9I GATC 4 cut(s) 253, 538, 622, 763
LmnI GCTCC 2 cut(s) 49, 1054
Lsp1109I GCAGC 4 cut(s) 314, 343, 1104, 1116
LweI GCATC 5 cut(s) 385, 485, 578, 832, 1129
MaeI CTAG 2 cut(s) 545, 675
MaeII ACGT 1 cut(s) 508
MaeIII GTNAC 4 cut(s) 153, 441, 532, 988
MalI GATC 4 cut(s) 255, 540, 624, 765
MboI GATC 4 cut(s) 253, 538, 622, 763
MboII GAAGA 6 cut(s) 43, 162, 494, 497, 1004, 1175
MflI RGATCY 1 cut(s) 538
MhlI GDGCHC 1 cut(s) 41
MluCI AATT 5 cut(s) 325, 655, 807, 1092, 1101
Mly113I GGCGCC 1 cut(s) 363
MlyI GAGTC 1 cut(s) 870
MmeI TCCRAC 1 cut(s) 521
Mph1103I ATGCAT 1 cut(s) 754
MreI CGCCGGCG 1 cut(s) 365
MroNI GCCGGC 2 cut(s) 359, 365
MroXI GAANNNNTTC 1 cut(s) 1096
MseI TTAA 3 cut(s) 266, 803, 872
MslI CAYNNNNRTG 1 cut(s) 34
MspI CCGG 3 cut(s) 360, 366, 378
MspR9I CCNGG 1 cut(s) 1206
MvaI CCWGG 1 cut(s) 1206
MwoI GCNNNNNNNGC 5 cut(s) 311, 362, 473, 1114, 1126
NaeI GCCGGC 2 cut(s) 361, 367
NarI GGCGCC 1 cut(s) 363
NdeII GATC 4 cut(s) 253, 538, 622, 763
NgoMIV GCCGGC 2 cut(s) 359, 365
NlaIII CATG 3 cut(s) 475, 752, 1162
NlaIV GGNNCC 1 cut(s) 364
NmuCI GTSAC 2 cut(s) 153, 441
NsiI ATGCAT 1 cut(s) 754
NspI RCATGY 1 cut(s) 752
NspV TTCGAA 1 cut(s) 422
PaeR7I CTCGAG 1 cut(s) 816
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PdiI GCCGGC 2 cut(s) 361, 367
PdmI GAANNNNTTC 1 cut(s) 1096
PfeI GAWTC 1 cut(s) 997
PkrI GCNGC 5 cut(s) 230, 304, 358, 1119, 1131
PleI GAGTC 1 cut(s) 870
PluTI GGCGCC 1 cut(s) 366
PpsI GAGTC 1 cut(s) 870
Ppu21I YACGTR 1 cut(s) 509
Psp6I CCWGG 1 cut(s) 1204
PspFI CCCAGC 2 cut(s) 149, 1061
PspGI CCWGG 1 cut(s) 1204
PspN4I GGNNCC 1 cut(s) 364
PspPI GGNCC 3 cut(s) 202, 518, 861
PsuI RGATCY 1 cut(s) 538
RsaI GTAC 3 cut(s) 284, 926, 1025
RsaNI GTAC 3 cut(s) 283, 925, 1024
RseI CAYNNNNRTG 1 cut(s) 34
SaqAI TTAA 3 cut(s) 266, 803, 872
SatI GCNGC 5 cut(s) 229, 303, 357, 1118, 1130
Sau3AI GATC 4 cut(s) 253, 538, 622, 763
Sau96I GGNCC 3 cut(s) 202, 518, 861
ScaI AGTACT 1 cut(s) 926
SchI GAGTC 1 cut(s) 870
ScrFI CCNGG 1 cut(s) 1206
SduI GDGCHC 1 cut(s) 41
SfaNI GCATC 5 cut(s) 385, 485, 578, 832, 1129
SfoI GGCGCC 1 cut(s) 364
Sfr274I CTCGAG 1 cut(s) 816
SfuI TTCGAA 1 cut(s) 422
SgrAI CRCCGGYG 1 cut(s) 365
SlaI CTCGAG 1 cut(s) 816
SmiMI CAYNNNNRTG 1 cut(s) 34
SmlI CTYRAG 2 cut(s) 611, 816
SmoI CTYRAG 2 cut(s) 611, 816
Sse9I AATT 5 cut(s) 325, 655, 807, 1092, 1101
SsiI CCGC 6 cut(s) 77, 205, 228, 231, 369, 407
SspDI GGCGCC 1 cut(s) 362
SspI AATATT 1 cut(s) 562
SspMI CTAG 2 cut(s) 545, 675
StyD4I CCNGG 1 cut(s) 1204
StyI CCWWGG 1 cut(s) 334
TaaI ACNGT 3 cut(s) 282, 892, 978
TaiI ACGT 1 cut(s) 511
TaqI TCGA 7 cut(s) 240, 422, 554, 604, 817, 847, 967
TasI AATT 5 cut(s) 325, 655, 807, 1092, 1101
TatI WGTACW 1 cut(s) 924
TauI GCSGC 1 cut(s) 231
TfiI GAWTC 1 cut(s) 997
Tru1I TTAA 3 cut(s) 266, 803, 872
Tru9I TTAA 3 cut(s) 266, 803, 872
TscAI CASTG 4 cut(s) 184, 586, 895, 1116
TseFI GTSAC 2 cut(s) 153, 441
TseI GCWGC 4 cut(s) 302, 356, 1117, 1129
Tsp45I GTSAC 2 cut(s) 153, 441
TspDTI ATGAA 6 cut(s) 133, 441, 696, 772, 953, 1010
TspGWI ACGGA 1 cut(s) 882
TspRI CASTG 4 cut(s) 184, 586, 895, 1116
XagI CCTNNNNNAGG 1 cut(s) 816
XapI RAATTY 3 cut(s) 655, 807, 1092
XbaI TCTAGA 1 cut(s) 544
XceI RCATGY 1 cut(s) 752
XhoI CTCGAG 1 cut(s) 816
XmnI GAANNNNTTC 1 cut(s) 1096
XspI CTAG 2 cut(s) 545, 675
ZrmI AGTACT 1 cut(s) 926
Zsp2I ATGCAT 1 cut(s) 754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.