Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0017058

Physical Location & Seq

Genomic Coordinates Forward (+)

11501767 .. 11505303

Gene Structure 3537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G082000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 819 bp

ATGAACAATAGTTCTTCTTCCAAATCGCACGGTCTAGATCAGCCTGAGTTGAGTGGGCCCAAATCACTGCGCACCAAAATGGGCAAACCAGAAGACAGTGAAAAGAAGATTTTTCATAAGAAACTCAAAGATGTTGAGATTAGTGTTCCGATAGTGTATGGCAATATTTCATTCTGGCTCGGTAAGAAGGCAAACGAGTACCAATCACATAAGTGGACTGTATACGTCCGTGGGGCAACCAATGAGGATTTGGGAGTGGTGATAAAGCGTGCTGTTTTTCAGCTGCATTCCAGTTTCAATAATCCCACAAGGGTGATCGAGTCACCACCATTCGAGTTGTCAGAATGTGGTTGGGGCGAATTTGAAATCGCTATTACTCTTTTTTTCCACAGTGATGTTTGTGATAAGCCATTAAACTTATTTCATCATTTGAAGTTGTACCCAGAGGATGAGTCTGGTCCTATGTCAACTAAAAAACCTGTTGTCGTGGAATCCTATGATGAGATTGTGTTCCCCGAGCCTTCAGAGGCGTTTTTAGCTCGTGTGCAGAATCAGCCAGCTTTAATTGTGCCCAGATTACCTGCTGGCTCTGTTTTGCCTCCTCCTGTGCCAGTTGAGGATCCAAGTAAGAGAAAGAGAGGTGACACCAAAGATCATCCGATGTCCCAGTGGTTCATGAATTTCTCAGAAGCAGATGAGCTGTTACAACTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAATTTCGAAGAGAGATAAGTTTGCTAGATGGACAGCAGCAGCAACAAGTGAATTCTGTCTCCGACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009909 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019222 GO:0019538 GO:0031056 GO:0031248 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032991 GO:0033043 GO:0033044 GO:0035065 GO:0035267 GO:0036211 GO:0040034 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048506 GO:0048509 GO:0048510 GO:0048580 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090239 GO:1901564 GO:1901983 GO:1902275 GO:1902493 GO:1902494 GO:1902562 GO:1990234 GO:2000026 GO:2000028 GO:2000241 GO:2000756

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

YEATS

Protein Analysis

273

Amino Acids

30.73

Weight (kDa)

6.32

Isoelectric Point (pI)

59.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45600 AT5G45600
fragaria_vesca	FvH4_2g10790
malus_domestica	MD10G1061200.v1.1
prunus_persica	Prupe.8G082000_v2.0.a1
pyrus_communis	pycom05g04440 pycom10g04710
rosa_chinensis	RchiOBHm_Chr6g0268561
rosa_rugosa	Rorug06G0043200
rosa_samantha	Rh6AG162700 Rh6BG166800 Rh6CG160500
rosa_wichuraiana	Rw0G004750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	71
Acc36I	ACCTGC	2 cut(s)	589, 718
AccI	GTMKAC	1 cut(s)	222
AclWI	GGATC	2 cut(s)	614, 627
AcsI	RAATTY	4 cut(s)	359, 679, 749, 799
AcuI	CTGAAG	1 cut(s)	507
AfaI	GTAC	2 cut(s)	200, 440
AgsI	TTSAA	4 cut(s)	298, 365, 433, 734
AleI	CACNNNNGTG	2 cut(s)	211, 311
AluBI	AGCT	6 cut(s)	283, 539, 560, 700, 719, 737
AluI	AGCT	6 cut(s)	283, 539, 560, 700, 719, 737
Alw26I	GTCTC	1 cut(s)	811
AlwI	GGATC	2 cut(s)	614, 627
Ama87I	CYCGRG	1 cut(s)	515
AoxI	GGCC	1 cut(s)	56
ApaI	GGGCCC	1 cut(s)	60
ApeKI	GCWGC	5 cut(s)	283, 713, 716, 784, 787
ApoI	RAATTY	4 cut(s)	359, 679, 749, 799
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	3 cut(s)	56, 57, 458
AsuHPI	GGTGA	4 cut(s)	271, 315, 325, 653
AsuII	TTCGAA	1 cut(s)	754
AvaI	CYCGRG	1 cut(s)	515
AvaII	GGWCC	1 cut(s)	458
BaeGI	GKGCMC	2 cut(s)	60, 573
BamHI	GGATCC	1 cut(s)	619
BanII	GRGCYC	1 cut(s)	60
BauI	CACGAG	1 cut(s)	540
BbsI	GAAGAC	1 cut(s)	99
BbvI	GCAGC	5 cut(s)	270, 725, 728, 796, 799
BccI	CCATC	1 cut(s)	770
BcoDI	GTCTC	1 cut(s)	811
BfaI	CTAG	2 cut(s)	35, 773
BfuAI	ACCTGC	2 cut(s)	589, 718
BisI	GCNGC	5 cut(s)	284, 714, 717, 785, 788
BlsI	GCNGC	5 cut(s)	285, 715, 718, 786, 789
Bme18I	GGWCC	1 cut(s)	458
BmeT110I	CYCGRG	1 cut(s)	515
BmgT120I	GGNCC	3 cut(s)	56, 57, 458
BmiI	GGNNCC	2 cut(s)	58, 621
BmrI	ACTGGG	1 cut(s)	661
BmuI	ACTGGG	1 cut(s)	661
BpiI	GAAGAC	1 cut(s)	99
Bpu14I	TTCGAA	1 cut(s)	754
BsaJI	CCNNGG	1 cut(s)	229
Bse1I	ACTGG	4 cut(s)	291, 611, 667, 814
BseDI	CCNNGG	1 cut(s)	229
BseGI	GGATG	2 cut(s)	454, 655
BseMII	CTCAG	2 cut(s)	36, 699
BseNI	ACTGG	4 cut(s)	291, 611, 667, 814
BseRI	GAGGAG	1 cut(s)	591
BseSI	GKGCMC	2 cut(s)	60, 573
BseXI	GCAGC	5 cut(s)	270, 725, 728, 796, 799
BsgI	GTGCAG	1 cut(s)	566
BshFI	GGCC	1 cut(s)	58
BsiHKCI	CYCGRG	1 cut(s)	515
BslFI	GGGAC	1 cut(s)	649
BsmAI	GTCTC	1 cut(s)	811
BsmFI	GGGAC	1 cut(s)	649
BsmI	GAATGC	1 cut(s)	286
BsnI	GGCC	1 cut(s)	58
BsoBI	CYCGRG	1 cut(s)	515
Bsp119I	TTCGAA	1 cut(s)	754
Bsp120I	GGGCCC	1 cut(s)	56
Bsp1286I	GDGCHC	2 cut(s)	60, 573
Bsp143I	GATC	4 cut(s)	37, 315, 619, 652
BspANI	GGCC	1 cut(s)	58
BspCNI	CTCAG	2 cut(s)	37, 698
BspHI	TCATGA	1 cut(s)	675
BspLI	GGNNCC	2 cut(s)	58, 621
BspMI	ACCTGC	2 cut(s)	589, 718
BspPI	GGATC	2 cut(s)	614, 627
BspT104I	TTCGAA	1 cut(s)	754
BsrI	ACTGG	4 cut(s)	291, 611, 667, 814
BssECI	CCNNGG	1 cut(s)	229
BssMI	GATC	4 cut(s)	37, 315, 619, 652
BssNAI	GTATAC	1 cut(s)	223
BssSI	CACGAG	1 cut(s)	540
Bst1107I	GTATAC	1 cut(s)	223
Bst2BI	CACGAG	1 cut(s)	540
Bst4CI	ACNGT	4 cut(s)	32, 98, 220, 392
Bst6I	CTCTTC	1 cut(s)	751
BstBI	TTCGAA	1 cut(s)	754
BstC8I	GCNNGC	3 cut(s)	270, 558, 586
BstDEI	CTNAG	2 cut(s)	45, 685
BstDSI	CCRYGG	1 cut(s)	229
BstF5I	GGATG	2 cut(s)	454, 655
BstHHI	GCGC	1 cut(s)	72
BstKTI	GATC	4 cut(s)	40, 318, 622, 655
BstMAI	GTCTC	1 cut(s)	811
BstMBI	GATC	4 cut(s)	37, 315, 619, 652
BstMWI	GCNNNNNNNGC	3 cut(s)	536, 553, 743
BstSLI	GKGCMC	2 cut(s)	60, 573
BstV1I	GCAGC	5 cut(s)	270, 725, 728, 796, 799
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	1 cut(s)	619
BstYI	RGATCY	1 cut(s)	619
BstZ17I	GTATAC	1 cut(s)	223
BsuRI	GGCC	1 cut(s)	58
BtgI	CCRYGG	1 cut(s)	229
BtsCI	GGATG	2 cut(s)	454, 655
BtsI	GCAGTG	1 cut(s)	65
BtsIMutI	CAGTG	4 cut(s)	65, 103, 397, 674
BveI	ACCTGC	2 cut(s)	589, 718
Cac8I	GCNNGC	3 cut(s)	270, 558, 586
CciI	TCATGA	1 cut(s)	675
CfoI	GCGC	1 cut(s)	72
Cfr13I	GGNCC	3 cut(s)	56, 57, 458
Csp6I	GTAC	2 cut(s)	199, 439
CviAII	CATG	1 cut(s)	676
CviQI	GTAC	2 cut(s)	199, 439
DdeI	CTNAG	2 cut(s)	45, 685
DpnI	GATC	4 cut(s)	39, 317, 621, 654
DpnII	GATC	4 cut(s)	37, 315, 619, 652
Eam1104I	CTCTTC	1 cut(s)	751
EarI	CTCTTC	1 cut(s)	751
Eco24I	GRGCYC	1 cut(s)	60
Eco47I	GGWCC	1 cut(s)	458
Eco57I	CTGAAG	1 cut(s)	507
Eco88I	CYCGRG	1 cut(s)	515
EcoRI	GAATTC	1 cut(s)	799
EcoT38I	GRGCYC	1 cut(s)	60
FaeI	CATG	1 cut(s)	679
FaiI	YATR	8 cut(s)	117, 159, 210, 223, 464, 498, 677, 741
FaqI	GGGAC	1 cut(s)	649
FatI	CATG	1 cut(s)	675
FblI	GTMKAC	1 cut(s)	222
Fnu4HI	GCNGC	5 cut(s)	284, 714, 717, 785, 788
FokI	GGATG	2 cut(s)	461, 642
FriOI	GRGCYC	1 cut(s)	60
Fsp4HI	GCNGC	5 cut(s)	284, 714, 717, 785, 788
FspBI	CTAG	2 cut(s)	35, 773
FspI	TGCGCA	1 cut(s)	71
GlaI	GCGC	1 cut(s)	71
GluI	GCNGC	5 cut(s)	284, 714, 717, 785, 788
HaeIII	GGCC	1 cut(s)	58
HhaI	GCGC	1 cut(s)	72
Hin1II	CATG	1 cut(s)	679
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HincII	GTYRAC	1 cut(s)	468
HindII	GTYRAC	1 cut(s)	468
HinfI	GANTC	4 cut(s)	320, 452, 491, 550
HphI	GGTGA	4 cut(s)	271, 315, 325, 653
Hpy166II	GTNNAC	3 cut(s)	216, 223, 468
Hpy188I	TCNGA	6 cut(s)	150, 343, 526, 660, 688, 811
Hpy188III	TCNNGA	2 cut(s)	35, 676
Hpy8I	GTNNAC	3 cut(s)	216, 223, 468
HpyAV	CCTTC	2 cut(s)	181, 531
HpyCH4III	ACNGT	4 cut(s)	32, 98, 220, 392
HpyCH4IV	ACGT	1 cut(s)	225
HpyCH4V	TGCA	3 cut(s)	286, 547, 713
HpyF10VI	GCNNNNNNNGC	3 cut(s)	536, 553, 743
HpyF3I	CTNAG	2 cut(s)	45, 685
HpySE526I	ACGT	1 cut(s)	225
Hsp92II	CATG	1 cut(s)	679
HspAI	GCGC	1 cut(s)	70
Kzo9I	GATC	4 cut(s)	37, 315, 619, 652
Lsp1109I	GCAGC	5 cut(s)	270, 725, 728, 796, 799
MaeI	CTAG	2 cut(s)	35, 773
MaeII	ACGT	1 cut(s)	225
MaeIII	GTNAC	3 cut(s)	321, 641, 702
MalI	GATC	4 cut(s)	39, 317, 621, 654
MboI	GATC	4 cut(s)	37, 315, 619, 652
MboII	GAAGA	5 cut(s)	6, 9, 104, 118, 768
MflI	RGATCY	1 cut(s)	619
MhlI	GDGCHC	2 cut(s)	60, 573
MluCI	AATT	5 cut(s)	359, 564, 679, 749, 799
MlyI	GAGTC	2 cut(s)	329, 461
MnlI	CCTC	7 cut(s)	238, 439, 520, 609, 610, 612, 632
MseI	TTAA	2 cut(s)	413, 563
MslI	CAYNNNNRTG	4 cut(s)	77, 211, 311, 393
MspA1I	CMGCKG	1 cut(s)	283
Mva1269I	GAATGC	1 cut(s)	286
MwoI	GCNNNNNNNGC	3 cut(s)	536, 553, 743
NdeII	GATC	4 cut(s)	37, 315, 619, 652
NlaIII	CATG	1 cut(s)	679
NlaIV	GGNNCC	2 cut(s)	58, 621
NmuCI	GTSAC	2 cut(s)	321, 641
NsbI	TGCGCA	1 cut(s)	71
NspV	TTCGAA	1 cut(s)	754
OliI	CACNNNNGTG	2 cut(s)	211, 311
PagI	TCATGA	1 cut(s)	675
PctI	GAATGC	1 cut(s)	286
PfeI	GAWTC	2 cut(s)	491, 550
PkrI	GCNGC	5 cut(s)	285, 715, 718, 786, 789
PleI	GAGTC	2 cut(s)	328, 460
PpsI	GAGTC	2 cut(s)	328, 460
PspN4I	GGNNCC	2 cut(s)	58, 621
PspOMI	GGGCCC	1 cut(s)	56
PspPI	GGNCC	3 cut(s)	56, 57, 458
PsuI	RGATCY	1 cut(s)	619
PvuII	CAGCTG	1 cut(s)	283
RsaI	GTAC	2 cut(s)	200, 440
RsaNI	GTAC	2 cut(s)	199, 439
RseI	CAYNNNNRTG	4 cut(s)	77, 211, 311, 393
SaqAI	TTAA	2 cut(s)	413, 563
SatI	GCNGC	5 cut(s)	284, 714, 717, 785, 788
Sau3AI	GATC	4 cut(s)	37, 315, 619, 652
Sau96I	GGNCC	3 cut(s)	56, 57, 458
SchI	GAGTC	2 cut(s)	329, 461
SduI	GDGCHC	2 cut(s)	60, 573
SfuI	TTCGAA	1 cut(s)	754
SinI	GGWCC	1 cut(s)	458
SmiMI	CAYNNNNRTG	4 cut(s)	77, 211, 311, 393
Sse9I	AATT	5 cut(s)	359, 564, 679, 749, 799
SspI	AATATT	1 cut(s)	166
SspMI	CTAG	2 cut(s)	35, 773
TaaI	ACNGT	4 cut(s)	32, 98, 220, 392
TaiI	ACGT	1 cut(s)	228
TaqI	TCGA	3 cut(s)	318, 333, 754
TasI	AATT	5 cut(s)	359, 564, 679, 749, 799
TfiI	GAWTC	2 cut(s)	491, 550
Tru1I	TTAA	2 cut(s)	413, 563
Tru9I	TTAA	2 cut(s)	413, 563
TscAI	CASTG	4 cut(s)	72, 103, 397, 674
TseFI	GTSAC	2 cut(s)	321, 641
TseI	GCWGC	5 cut(s)	283, 713, 716, 784, 787
Tsp45I	GTSAC	2 cut(s)	321, 641
TspDTI	ATGAA	6 cut(s)	17, 104, 159, 413, 664, 692
TspGWI	ACGGA	1 cut(s)	218
TspRI	CASTG	4 cut(s)	72, 103, 397, 674
VpaK11BI	GGWCC	1 cut(s)	458
XapI	RAATTY	4 cut(s)	359, 679, 749, 799
XbaI	TCTAGA	1 cut(s)	34
XcmI	CCANNNNNNNNNTGG	1 cut(s)	247
XmiI	GTMKAC	1 cut(s)	222
XspI	CTAG	2 cut(s)	35, 773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.