Belongs to the complex I LYR family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34700 |
| fragaria_vesca | FvH4_2g10430 |
| malus_domestica | MD00G1086200.v1.1 MD00G1117500.v1.1 |
| prunus_persica | Prupe.8G083900_v2.0.a1 |
| pyrus_communis | pycom05g04620 pycom10g04880 |
| rosa_chinensis | RchiOBHm_Chr6g0267931 |
| rosa_laevigata | RLG00000013967 |
| rosa_multiflora | Rmu_sc0000434.1_g000017 |
| rosa_roxburghii | Rroxscaffold_7G00200320 |
| rosa_rugosa | Rorug06G0035400 |
| rosa_samantha | Rh6AG157500 Rh6BG159500 Rh6CG157200 Rh6DG145100 |
| rosa_wichuraiana | Rw0G019610 Rw6G013680 Rw6G013700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 313 |
| Acc36I | ACCTGC | 1 cut(s) | 313 |
| AccB1I | GGYRCC | 1 cut(s) | 234 |
| AccII | CGCG | 1 cut(s) | 147 |
| AccIII | TCCGGA | 1 cut(s) | 181 |
| AciI | CCGC | 1 cut(s) | 112 |
| AclWI | GGATC | 4 cut(s) | 58, 71, 173, 239 |
| AcuI | CTGAAG | 1 cut(s) | 234 |
| AcvI | CACGTG | 1 cut(s) | 172 |
| AcyI | GRCGYC | 1 cut(s) | 235 |
| AfaI | GTAC | 1 cut(s) | 26 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 308 |
| AgsI | TTSAA | 1 cut(s) | 279 |
| AluBI | AGCT | 2 cut(s) | 32, 44 |
| AluI | AGCT | 2 cut(s) | 32, 44 |
| AlwI | GGATC | 4 cut(s) | 58, 71, 173, 239 |
| Aor13HI | TCCGGA | 1 cut(s) | 181 |
| ApeKI | GCWGC | 3 cut(s) | 20, 29, 41 |
| AspLEI | GCGC | 3 cut(s) | 8, 147, 237 |
| AsuC2I | CCSGG | 1 cut(s) | 270 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| AsuII | TTCGAA | 1 cut(s) | 156 |
| BamHI | GGATCC | 1 cut(s) | 63 |
| BanI | GGYRCC | 1 cut(s) | 234 |
| BanII | GRGCYC | 2 cut(s) | 82, 268 |
| BbrPI | CACGTG | 1 cut(s) | 172 |
| BbvI | GCAGC | 3 cut(s) | 32, 41, 53 |
| BcnI | CCSGG | 1 cut(s) | 270 |
| BfmI | CTRYAG | 2 cut(s) | 70, 306 |
| BfoI | RGCGCY | 1 cut(s) | 238 |
| BfuAI | ACCTGC | 1 cut(s) | 313 |
| BisI | GCNGC | 3 cut(s) | 21, 30, 42 |
| BlsI | GCNGC | 3 cut(s) | 22, 31, 43 |
| Bme1390I | CCNGG | 1 cut(s) | 270 |
| BmiI | GGNNCC | 3 cut(s) | 65, 236, 267 |
| BmrFI | CCNGG | 1 cut(s) | 270 |
| BmrI | ACTGGG | 1 cut(s) | 109 |
| BmsI | GCATC | 2 cut(s) | 121, 127 |
| BmuI | ACTGGG | 1 cut(s) | 109 |
| Bpu14I | TTCGAA | 1 cut(s) | 156 |
| BpuMI | CCSGG | 1 cut(s) | 270 |
| BsaAI | YACGTR | 1 cut(s) | 172 |
| BsaHI | GRCGYC | 1 cut(s) | 235 |
| BsaJI | CCNNGG | 1 cut(s) | 260 |
| BsaWI | WCCGGW | 1 cut(s) | 181 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 308 |
| Bse1I | ACTGG | 1 cut(s) | 104 |
| BseAI | TCCGGA | 1 cut(s) | 181 |
| BseDI | CCNNGG | 1 cut(s) | 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BseMII | CTCAG | 1 cut(s) | 59 |
| BseNI | ACTGG | 1 cut(s) | 104 |
| BseXI | GCAGC | 3 cut(s) | 32, 41, 53 |
| Bsh1236I | CGCG | 1 cut(s) | 147 |
| BshNI | GGYRCC | 1 cut(s) | 234 |
| BsiSI | CCGG | 2 cut(s) | 182, 270 |
| BsiWI | CGTACG | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 308 |
| Bsp119I | TTCGAA | 1 cut(s) | 156 |
| Bsp1286I | GDGCHC | 2 cut(s) | 82, 268 |
| Bsp13I | TCCGGA | 1 cut(s) | 181 |
| Bsp143I | GATC | 3 cut(s) | 63, 178, 244 |
| BspACI | CCGC | 1 cut(s) | 112 |
| BspCNI | CTCAG | 1 cut(s) | 58 |
| BspEI | TCCGGA | 1 cut(s) | 181 |
| BspFNI | CGCG | 1 cut(s) | 147 |
| BspLI | GGNNCC | 3 cut(s) | 65, 236, 267 |
| BspMAI | CTGCAG | 1 cut(s) | 310 |
| BspMI | ACCTGC | 1 cut(s) | 313 |
| BspPI | GGATC | 4 cut(s) | 58, 71, 173, 239 |
| BspT104I | TTCGAA | 1 cut(s) | 156 |
| BspT107I | GGYRCC | 1 cut(s) | 234 |
| BsrI | ACTGG | 1 cut(s) | 104 |
| BssECI | CCNNGG | 1 cut(s) | 260 |
| BssMI | GATC | 3 cut(s) | 63, 178, 244 |
| BssNI | GRCGYC | 1 cut(s) | 235 |
| BssT1I | CCWWGG | 1 cut(s) | 260 |
| BstACI | GRCGYC | 1 cut(s) | 235 |
| BstBAI | YACGTR | 1 cut(s) | 172 |
| BstBI | TTCGAA | 1 cut(s) | 156 |
| BstDEI | CTNAG | 1 cut(s) | 45 |
| BstFNI | CGCG | 1 cut(s) | 147 |
| BstH2I | RGCGCY | 1 cut(s) | 238 |
| BstHHI | GCGC | 3 cut(s) | 8, 147, 237 |
| BstKTI | GATC | 3 cut(s) | 66, 181, 247 |
| BstMBI | GATC | 3 cut(s) | 63, 178, 244 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 26, 29, 38 |
| BstSCI | CCNGG | 1 cut(s) | 268 |
| BstSFI | CTRYAG | 2 cut(s) | 70, 306 |
| BstUI | CGCG | 1 cut(s) | 147 |
| BstV1I | GCAGC | 3 cut(s) | 32, 41, 53 |
| BstX2I | RGATCY | 2 cut(s) | 63, 178 |
| BstYI | RGATCY | 2 cut(s) | 63, 178 |
| BtsI | GCAGTG | 1 cut(s) | 15 |
| BtsIMutI | CAGTG | 1 cut(s) | 15 |
| BveI | ACCTGC | 1 cut(s) | 313 |
| CfoI | GCGC | 3 cut(s) | 8, 147, 237 |
| Csp6I | GTAC | 1 cut(s) | 25 |
| CviJI | RGCY | 6 cut(s) | 32, 44, 80, 104, 218, 266 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 44, 80, 104, 218, 266 |
| CviQI | GTAC | 1 cut(s) | 25 |
| DdeI | CTNAG | 1 cut(s) | 45 |
| DinI | GGCGCC | 1 cut(s) | 236 |
| DpnI | GATC | 3 cut(s) | 65, 180, 246 |
| DpnII | GATC | 3 cut(s) | 63, 178, 244 |
| Eco130I | CCWWGG | 1 cut(s) | 260 |
| Eco24I | GRGCYC | 2 cut(s) | 82, 268 |
| Eco57I | CTGAAG | 1 cut(s) | 234 |
| Eco72I | CACGTG | 1 cut(s) | 172 |
| EcoT14I | CCWWGG | 1 cut(s) | 260 |
| EcoT38I | GRGCYC | 2 cut(s) | 82, 268 |
| EgeI | GGCGCC | 1 cut(s) | 236 |
| EheI | GGCGCC | 1 cut(s) | 236 |
| ErhI | CCWWGG | 1 cut(s) | 260 |
| FaiI | YATR | 5 cut(s) | 203, 252, 325, 327, 333 |
| Fnu4HI | GCNGC | 3 cut(s) | 21, 30, 42 |
| FriOI | GRGCYC | 2 cut(s) | 82, 268 |
| Fsp4HI | GCNGC | 3 cut(s) | 21, 30, 42 |
| GlaI | GCGC | 3 cut(s) | 7, 146, 236 |
| GluI | GCNGC | 3 cut(s) | 21, 30, 42 |
| HaeII | RGCGCY | 1 cut(s) | 238 |
| HapII | CCGG | 2 cut(s) | 182, 270 |
| HhaI | GCGC | 3 cut(s) | 8, 147, 237 |
| Hin1I | GRCGYC | 1 cut(s) | 235 |
| Hin6I | GCGC | 3 cut(s) | 6, 145, 235 |
| HinP1I | GCGC | 3 cut(s) | 6, 145, 235 |
| HincII | GTYRAC | 1 cut(s) | 15 |
| HindII | GTYRAC | 1 cut(s) | 15 |
| HinfI | GANTC | 2 cut(s) | 198, 292 |
| HpaII | CCGG | 2 cut(s) | 182, 270 |
| HphI | GGTGA | 1 cut(s) | 101 |
| Hpy166II | GTNNAC | 2 cut(s) | 15, 109 |
| Hpy188I | TCNGA | 3 cut(s) | 48, 63, 291 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| Hpy8I | GTNNAC | 2 cut(s) | 15, 109 |
| Hpy99I | CGWCG | 1 cut(s) | 39 |
| HpyAV | CCTTC | 2 cut(s) | 43, 49 |
| HpyCH4IV | ACGT | 1 cut(s) | 171 |
| HpyCH4V | TGCA | 1 cut(s) | 308 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 26, 29, 38 |
| HpyF3I | CTNAG | 1 cut(s) | 45 |
| HpySE526I | ACGT | 1 cut(s) | 171 |
| Hsp92I | GRCGYC | 1 cut(s) | 235 |
| HspAI | GCGC | 3 cut(s) | 6, 145, 235 |
| KasI | GGCGCC | 1 cut(s) | 234 |
| Kpn2I | TCCGGA | 1 cut(s) | 181 |
| Kzo9I | GATC | 3 cut(s) | 63, 178, 244 |
| LmnI | GCTCC | 1 cut(s) | 271 |
| LpnPI | CCDG | 7 cut(s) | 85, 141, 195, 255, 283, 294, 318 |
| Lsp1109I | GCAGC | 3 cut(s) | 32, 41, 53 |
| LweI | GCATC | 2 cut(s) | 121, 127 |
| MaeII | ACGT | 1 cut(s) | 171 |
| MalI | GATC | 3 cut(s) | 65, 180, 246 |
| MboI | GATC | 3 cut(s) | 63, 178, 244 |
| MboII | GAAGA | 2 cut(s) | 188, 353 |
| MfeI | CAATTG | 1 cut(s) | 189 |
| MflI | RGATCY | 2 cut(s) | 63, 178 |
| MhlI | GDGCHC | 2 cut(s) | 82, 268 |
| MluCI | AATT | 1 cut(s) | 189 |
| Mly113I | GGCGCC | 1 cut(s) | 235 |
| MlyI | GAGTC | 1 cut(s) | 192 |
| MnlI | CCTC | 4 cut(s) | 77, 92, 144, 229 |
| MroI | TCCGGA | 1 cut(s) | 181 |
| MspI | CCGG | 2 cut(s) | 182, 270 |
| MspR9I | CCNGG | 1 cut(s) | 270 |
| MunI | CAATTG | 1 cut(s) | 189 |
| MvnI | CGCG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 26, 29, 38 |
| NarI | GGCGCC | 1 cut(s) | 235 |
| NciI | CCSGG | 1 cut(s) | 270 |
| NdeII | GATC | 3 cut(s) | 63, 178, 244 |
| NlaIV | GGNNCC | 3 cut(s) | 65, 236, 267 |
| NspV | TTCGAA | 1 cut(s) | 156 |
| PaqCI | CACCTGC | 1 cut(s) | 313 |
| PfeI | GAWTC | 1 cut(s) | 292 |
| Pfl23II | CGTACG | 1 cut(s) | 24 |
| PkrI | GCNGC | 3 cut(s) | 22, 31, 43 |
| PleI | GAGTC | 1 cut(s) | 192 |
| PluTI | GGCGCC | 1 cut(s) | 238 |
| PmaCI | CACGTG | 1 cut(s) | 172 |
| PmlI | CACGTG | 1 cut(s) | 172 |
| PpsI | GAGTC | 1 cut(s) | 192 |
| Ppu21I | YACGTR | 1 cut(s) | 172 |
| PspCI | CACGTG | 1 cut(s) | 172 |
| PspLI | CGTACG | 1 cut(s) | 24 |
| PspN4I | GGNNCC | 3 cut(s) | 65, 236, 267 |
| PstI | CTGCAG | 1 cut(s) | 310 |
| PsuI | RGATCY | 2 cut(s) | 63, 178 |
| RsaI | GTAC | 1 cut(s) | 26 |
| RsaNI | GTAC | 1 cut(s) | 25 |
| SatI | GCNGC | 3 cut(s) | 21, 30, 42 |
| Sau3AI | GATC | 3 cut(s) | 63, 178, 244 |
| SbfI | CCTGCAGG | 1 cut(s) | 310 |
| SchI | GAGTC | 1 cut(s) | 192 |
| ScrFI | CCNGG | 1 cut(s) | 270 |
| SdaI | CCTGCAGG | 1 cut(s) | 310 |
| SduI | GDGCHC | 2 cut(s) | 82, 268 |
| SetI | ASST | 7 cut(s) | 34, 46, 60, 120, 155, 174, 307 |
| SfaNI | GCATC | 2 cut(s) | 121, 127 |
| SfcI | CTRYAG | 2 cut(s) | 70, 306 |
| SfoI | GGCGCC | 1 cut(s) | 236 |
| SfuI | TTCGAA | 1 cut(s) | 156 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 310 |
| Sse9I | AATT | 1 cut(s) | 189 |
| SsiI | CCGC | 1 cut(s) | 112 |
| SspDI | GGCGCC | 1 cut(s) | 234 |
| StyD4I | CCNGG | 1 cut(s) | 268 |
| StyI | CCWWGG | 1 cut(s) | 260 |
| TaiI | ACGT | 1 cut(s) | 174 |
| TaqI | TCGA | 2 cut(s) | 37, 156 |
| TasI | AATT | 1 cut(s) | 189 |
| TfiI | GAWTC | 1 cut(s) | 292 |
| TscAI | CASTG | 1 cut(s) | 15 |
| TseI | GCWGC | 3 cut(s) | 20, 29, 41 |
| TspDTI | ATGAA | 1 cut(s) | 275 |
| TspRI | CASTG | 1 cut(s) | 15 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 169 |