Prupe.8G133500_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0014453
Physical Location & Seq
Forward (+)
15494073 .. 15495793
1721 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G133500.1

Sequence Viewer

Length: 1188 bp
ATGGCTCTGCACAACCTTAACCTCCTCCCCTACTTCCTCCTTCCTCTCATTTCCCTCCTCTCCAATCACATCCCTCCAGCTCAAGCCCTCACAGCACCTTCAGACATCTCAGCCCTCAAGGCCTTCAAAGCCTCAATCAAAGCCTCCTCAATCCCGCCATGGTCTTGCTTGGCCTCCTGGGACTTCACCACAGACCCATGCGCCCTCCCTCGCCGAACCCACTTCACATGCGGGTTAACGTGCTCGCCCGACTCGACCAGGGTCACCCAGATCACCCTTGACCCGGCTGCTTACTCGGGCACACTCACCCCGCTAATTTCTCAGCTCACCCAACTCTCCACCCTCGACCTCTCTGAAAACTCCTTCTCCGGCCCCATCCCATCTTCCATTTCCTCTCTCTCCAAGCTCCAGAGTTTAACTCTCCGATCCAACTCGTTCTCTGGCTCTCTCCCTCCCTCCATAACCAACCTCAAATCCCTCGAATCGTTGGACATTTCGCACAATTTCTTATCTGGGTTCCTCCCAAACGCCATGAATTCGCTGCCCAATTTGAGAAGGCTCGATCTGAGCTTCAACAAGCTCGCTGGATCACTTCCAAAATTGCCCCCCAACTTGCTGGAACTCGCTCTAAAGCGCAATTCTTTATCCGGGTCGGTTCCAAAATCAGCTTTTACTGGGTTGATTCAGTTGGAAGTGGTCGAACTCAGTGAAAACTCGTTCTCTGGCACCTTACAATCCTGGTTCTTTCTCCTCCCCTCGCTCCAACAAGTCGATTTGGCCAATAACAGCCTGACAGGTGTTGAGATCCCGAAGCCCGCGGGTAATGGCGGAGGCGAGCTCGTGGCCGTCGACTTGGGATTTAACAGAATCGAAGGGTACCCGCCAGTGAATTTCGCGGGCTATCCTGTGCTGTCGTCACTGTCGCTTCGTTACAACCGGCTACGTGGCAGGATCCCATTGGAGTACGGGAGGAAAAAGTCGTTGAAGAGGTTGTATTTGGACGGAAACTTCCTGATTGGACAGCCGCCGGCGGGATTGGTGACCGGCGGTGTCTCCGGTAGCTTGGGGGATAATTGTCTGCAGGCGTGCCCAGCTTCTTCAAATCTGTGCCTGCCTTCGCAGAAACCAAACGCCATTTGCAAGCAAGCGTATGGTGGAAGGAAAGGAAAAGGAAAACCGAGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

396

Amino Acids

42.16

Weight (kDa)

9.4

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014453)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15320
fragaria_vesca FvH4_2g05350
malus_domestica MD05G1087700.v1.1
prunus_persica Prupe.8G133500_v2.0.a1
pyrus_communis pycom05g08720
rosa_chinensis RchiOBHm_Chr6g0255611
rosa_laevigata RLG00000014827
rosa_multiflora Rmu_co8324351.1_g000001 Rmu_sc0010421.1_g000006 Rmu_sc0015454.1_g000005
rosa_roxburghii Rroxscaffold_7G00209850
rosa_rugosa Rorug05G0559700
rosa_samantha Rh6AG078300 Rh6BG070600 Rh6CG069200 Rh6DG066200
rosa_wichuraiana Rw6G006600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 876
AccB1I GGYRCC 2 cut(s) 725, 876
AccI GTMKAC 1 cut(s) 849
AccII CGCG 2 cut(s) 818, 896
AclWI GGATC 5 cut(s) 420, 595, 799, 946, 959
AcoI YGGCCR 2 cut(s) 777, 843
AcsI RAATTY 2 cut(s) 535, 889
AcuI CTGAAG 1 cut(s) 84
AfaI GTAC 2 cut(s) 878, 965
AfiI CCNNNNNNNGG 2 cut(s) 283, 1031
AgsI TTSAA 4 cut(s) 127, 574, 985, 1101
AjnI CCWGG 3 cut(s) 176, 257, 737
AluBI AGCT 9 cut(s) 80, 325, 406, 570, 580, 668, 838, 1062, 1094
AluI AGCT 9 cut(s) 80, 325, 406, 570, 580, 668, 838, 1062, 1094
Alw21I GWGCWC 2 cut(s) 245, 840
Alw26I GTCTC 1 cut(s) 1057
AlwI GGATC 5 cut(s) 420, 595, 799, 946, 959
Ama87I CYCGRG 1 cut(s) 295
AoxI GGCC 5 cut(s) 120, 171, 370, 777, 843
ApeKI GCWGC 2 cut(s) 287, 541
ApoI RAATTY 2 cut(s) 535, 889
Asp718I GGTACC 1 cut(s) 876
AspLEI GCGC 2 cut(s) 203, 636
AspS9I GGNCC 1 cut(s) 371
AsuC2I CCSGG 2 cut(s) 284, 649
AsuHPI GGTGA 6 cut(s) 178, 256, 265, 298, 319, 1051
AvaI CYCGRG 1 cut(s) 295
BaeGI GKGCMC 2 cut(s) 302, 1091
BalI TGGCCA 1 cut(s) 779
BamHI GGATCC 1 cut(s) 951
BanI GGYRCC 2 cut(s) 725, 876
BanII GRGCYC 1 cut(s) 840
BauI CACGAG 1 cut(s) 839
Bbv12I GWGCWC 2 cut(s) 245, 840
BbvI GCAGC 2 cut(s) 274, 528
BccI CCATC 2 cut(s) 383, 388
BceAI ACGGC 1 cut(s) 830
BciT130I CCWGG 3 cut(s) 178, 259, 739
BcnI CCSGG 2 cut(s) 284, 649
BcoDI GTCTC 1 cut(s) 1057
BfmI CTRYAG 1 cut(s) 1079
BglI GCCNNNNNGGC 1 cut(s) 119
BisI GCNGC 3 cut(s) 288, 542, 1025
BlsI GCNGC 3 cut(s) 289, 543, 1026
Bme1390I CCNGG 5 cut(s) 178, 259, 284, 649, 739
BmeT110I CYCGRG 1 cut(s) 295
BmgT120I GGNCC 1 cut(s) 371
BmiI GGNNCC 6 cut(s) 373, 518, 657, 727, 878, 953
BmrFI CCNGG 5 cut(s) 178, 259, 284, 649, 739
BmrI ACTGGG 1 cut(s) 684
BmuI ACTGGG 1 cut(s) 684
BoxI GACNNNNGTC 1 cut(s) 260
BplI GAGNNNNNCTC 4 cut(s) 403, 435, 822, 854
BpmI CTGGAG 2 cut(s) 60, 392
BpuEI CTTGAG 2 cut(s) 66, 101
BpuMI CCSGG 2 cut(s) 284, 649
BsaAI YACGTR 1 cut(s) 944
BsaJI CCNNGG 5 cut(s) 158, 177, 258, 816, 1178
BsaWI WCCGGW 1 cut(s) 1055
BsaXI ACNNNNNCTCC 2 cut(s) 350, 380
Bsc4I CCNNNNNNNGG 2 cut(s) 283, 1031
Bse118I RCCGGY 3 cut(s) 936, 1027, 1043
Bse1I ACTGG 2 cut(s) 679, 884
BseBI CCWGG 3 cut(s) 178, 259, 739
BseDI CCNNGG 5 cut(s) 158, 177, 258, 816, 1178
BseGI GGATG 2 cut(s) 69, 375
BseLI CCNNNNNNNGG 2 cut(s) 283, 1031
BseMII CTCAG 4 cut(s) 123, 335, 557, 718
BseNI ACTGG 2 cut(s) 679, 884
BseRI GAGGAG 4 cut(s) 14, 47, 136, 740
BseSI GKGCMC 2 cut(s) 302, 1091
BseXI GCAGC 2 cut(s) 274, 528
BseYI CCCAGC 1 cut(s) 1090
Bsh1236I CGCG 2 cut(s) 818, 896
BshFI GGCC 5 cut(s) 122, 173, 372, 779, 845
BshNI GGYRCC 2 cut(s) 725, 876
BsiHKAI GWGCWC 2 cut(s) 245, 840
BsiHKCI CYCGRG 1 cut(s) 295
BsiSI CCGG 7 cut(s) 284, 369, 648, 937, 1028, 1044, 1056
BslFI GGGAC 1 cut(s) 194
BslI CCNNNNNNNGG 2 cut(s) 283, 1031
BsmAI GTCTC 1 cut(s) 1057
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 5 cut(s) 122, 173, 372, 779, 845
BsoBI CYCGRG 1 cut(s) 295
Bsp1286I GDGCHC 4 cut(s) 245, 302, 840, 1091
Bsp143I GATC 6 cut(s) 270, 425, 562, 587, 804, 951
Bsp19I CCATGG 1 cut(s) 158
BspANI GGCC 5 cut(s) 122, 173, 372, 779, 845
BspCNI CTCAG 4 cut(s) 122, 334, 558, 717
BspFNI CGCG 2 cut(s) 818, 896
BspLI GGNNCC 6 cut(s) 373, 518, 657, 727, 878, 953
BspMAI CTGCAG 1 cut(s) 1083
BspPI GGATC 5 cut(s) 420, 595, 799, 946, 959
BspT107I GGYRCC 2 cut(s) 725, 876
BsrFI RCCGGY 3 cut(s) 936, 1027, 1043
BsrI ACTGG 2 cut(s) 679, 884
BssAI RCCGGY 3 cut(s) 936, 1027, 1043
BssECI CCNNGG 5 cut(s) 158, 177, 258, 816, 1178
BssMI GATC 6 cut(s) 270, 425, 562, 587, 804, 951
BssSI CACGAG 1 cut(s) 839
BssT1I CCWWGG 1 cut(s) 158
Bst2BI CACGAG 1 cut(s) 839
Bst2UI CCWGG 3 cut(s) 178, 259, 739
Bst4CI ACNGT 1 cut(s) 921
Bst6I CTCTTC 1 cut(s) 980
BstBAI YACGTR 1 cut(s) 944
BstDEI CTNAG 4 cut(s) 109, 321, 566, 704
BstDSI CCRYGG 2 cut(s) 158, 816
BstEII GGTNACC 2 cut(s) 262, 1039
BstF5I GGATG 2 cut(s) 69, 375
BstFNI CGCG 2 cut(s) 818, 896
BstHHI GCGC 2 cut(s) 203, 636
BstKTI GATC 6 cut(s) 273, 428, 565, 590, 807, 954
BstMAI GTCTC 1 cut(s) 1057
BstMBI GATC 6 cut(s) 270, 425, 562, 587, 804, 951
BstMWI GCNNNNNNNGC 4 cut(s) 92, 119, 128, 1091
BstNI CCWGG 3 cut(s) 178, 259, 739
BstNSI RCATGY 1 cut(s) 231
BstPAI GACNNNNGTC 1 cut(s) 260
BstPI GGTNACC 2 cut(s) 262, 1039
BstSCI CCNGG 5 cut(s) 176, 257, 282, 647, 737
BstSFI CTRYAG 1 cut(s) 1079
BstSLI GKGCMC 2 cut(s) 302, 1091
BstUI CGCG 2 cut(s) 818, 896
BstV1I GCAGC 2 cut(s) 274, 528
BstX2I RGATCY 2 cut(s) 804, 951
BstXI CCANNNNNNTGG 1 cut(s) 616
BstYI RGATCY 2 cut(s) 804, 951
BsuRI GGCC 5 cut(s) 122, 173, 372, 779, 845
BtgI CCRYGG 2 cut(s) 158, 816
BtsCI GGATG 2 cut(s) 69, 375
BtsIMutI CAGTG 3 cut(s) 712, 891, 917
CfoI GCGC 2 cut(s) 203, 636
Cfr10I RCCGGY 3 cut(s) 936, 1027, 1043
Cfr13I GGNCC 1 cut(s) 371
Cfr42I CCGCGG 1 cut(s) 819
Csp6I GTAC 2 cut(s) 877, 964
CviAII CATG 4 cut(s) 159, 198, 228, 532
CviQI GTAC 2 cut(s) 877, 964
DdeI CTNAG 4 cut(s) 109, 321, 566, 704
DpnI GATC 6 cut(s) 272, 427, 564, 589, 806, 953
DpnII GATC 6 cut(s) 270, 425, 562, 587, 804, 951
EaeI YGGCCR 2 cut(s) 777, 843
Eam1104I CTCTTC 1 cut(s) 980
EarI CTCTTC 1 cut(s) 980
EciI GGCGGA 1 cut(s) 843
Ecl136II GAGCTC 1 cut(s) 838
Eco130I CCWWGG 1 cut(s) 158
Eco147I AGGCCT 1 cut(s) 122
Eco24I GRGCYC 1 cut(s) 840
Eco53kI GAGCTC 1 cut(s) 838
Eco57I CTGAAG 1 cut(s) 84
Eco88I CYCGRG 1 cut(s) 295
Eco91I GGTNACC 2 cut(s) 262, 1039
EcoICRI GAGCTC 1 cut(s) 838
EcoO65I GGTNACC 2 cut(s) 262, 1039
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 3 cut(s) 176, 257, 737
EcoT14I CCWWGG 1 cut(s) 158
EcoT38I GRGCYC 1 cut(s) 840
ErhI CCWWGG 1 cut(s) 158
FaeI CATG 4 cut(s) 162, 201, 231, 535
FaiI YATR 6 cut(s) 160, 199, 229, 461, 533, 1152
FaqI GGGAC 1 cut(s) 194
FatI CATG 4 cut(s) 158, 197, 227, 531
FauI CCCGC 8 cut(s) 162, 224, 318, 811, 823, 888, 889, 1024
FblI GTMKAC 1 cut(s) 849
Fnu4HI GCNGC 3 cut(s) 288, 542, 1025
FokI GGATG 2 cut(s) 56, 362
FriOI GRGCYC 1 cut(s) 840
Fsp4HI GCNGC 3 cut(s) 288, 542, 1025
GlaI GCGC 2 cut(s) 202, 635
GluI GCNGC 3 cut(s) 288, 542, 1025
GsaI CCCAGC 1 cut(s) 1094
GsuI CTGGAG 2 cut(s) 60, 392
HaeIII GGCC 5 cut(s) 122, 173, 372, 779, 845
HapII CCGG 7 cut(s) 284, 369, 648, 937, 1028, 1044, 1056
HhaI GCGC 2 cut(s) 203, 636
Hin1II CATG 4 cut(s) 162, 201, 231, 535
Hin6I GCGC 2 cut(s) 201, 634
HinP1I GCGC 2 cut(s) 201, 634
HincII GTYRAC 2 cut(s) 237, 850
HindII GTYRAC 2 cut(s) 237, 850
HinfI GANTC 4 cut(s) 251, 482, 682, 867
HpaI GTTAAC 1 cut(s) 237
HpaII CCGG 7 cut(s) 284, 369, 648, 937, 1028, 1044, 1056
HphI GGTGA 6 cut(s) 178, 256, 265, 298, 319, 1051
Hpy166II GTNNAC 2 cut(s) 237, 850
Hpy188I TCNGA 4 cut(s) 103, 355, 425, 567
Hpy188III TCNNGA 4 cut(s) 409, 808, 1012, 1185
Hpy8I GTNNAC 2 cut(s) 237, 850
Hpy99I CGWCG 1 cut(s) 851
HpyAV CCTTC 8 cut(s) 50, 108, 133, 373, 549, 866, 1125, 1152
HpyCH4III ACNGT 1 cut(s) 921
HpyCH4IV ACGT 2 cut(s) 239, 943
HpyCH4V TGCA 3 cut(s) 10, 1081, 1140
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 119, 128, 1091
HpyF3I CTNAG 4 cut(s) 109, 321, 566, 704
HpySE526I ACGT 2 cut(s) 239, 943
Hsp92II CATG 4 cut(s) 162, 201, 231, 535
HspAI GCGC 2 cut(s) 201, 634
KpnI GGTACC 1 cut(s) 880
KroI GCCGGC 1 cut(s) 1027
KroNI GCCGGC 1 cut(s) 1029
KspAI GTTAAC 1 cut(s) 237
KspI CCGCGG 1 cut(s) 819
Kzo9I GATC 6 cut(s) 270, 425, 562, 587, 804, 951
LmnI GCTCC 2 cut(s) 411, 765
Lsp1109I GCAGC 2 cut(s) 274, 528
MaeII ACGT 2 cut(s) 239, 943
MaeIII GTNAC 4 cut(s) 262, 915, 929, 1039
MalI GATC 6 cut(s) 272, 427, 564, 589, 806, 953
MboI GATC 6 cut(s) 270, 425, 562, 587, 804, 951
MboII GAAGA 3 cut(s) 375, 997, 1089
MflI RGATCY 2 cut(s) 804, 951
MhlI GDGCHC 4 cut(s) 245, 302, 840, 1091
MlsI TGGCCA 1 cut(s) 779
MluCI AATT 8 cut(s) 315, 502, 535, 547, 599, 637, 889, 1072
MluNI TGGCCA 1 cut(s) 779
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 4 cut(s) 453, 468, 669, 787
Mox20I TGGCCA 1 cut(s) 779
MreI CGCCGGCG 1 cut(s) 1027
MroNI GCCGGC 1 cut(s) 1027
MscI TGGCCA 1 cut(s) 779
MseI TTAA 4 cut(s) 18, 236, 416, 861
Msp20I TGGCCA 1 cut(s) 779
MspA1I CMGCKG 1 cut(s) 818
MspI CCGG 7 cut(s) 284, 369, 648, 937, 1028, 1044, 1056
MspR9I CCNGG 5 cut(s) 178, 259, 284, 649, 739
MvaI CCWGG 3 cut(s) 178, 259, 739
MvnI CGCG 2 cut(s) 818, 896
MwoI GCNNNNNNNGC 4 cut(s) 92, 119, 128, 1091
NaeI GCCGGC 1 cut(s) 1029
NciI CCSGG 2 cut(s) 284, 649
NcoI CCATGG 1 cut(s) 158
NdeII GATC 6 cut(s) 270, 425, 562, 587, 804, 951
NgoMIV GCCGGC 1 cut(s) 1027
NlaIII CATG 4 cut(s) 162, 201, 231, 535
NlaIV GGNNCC 6 cut(s) 373, 518, 657, 727, 878, 953
NmuCI GTSAC 3 cut(s) 262, 915, 1039
NspI RCATGY 1 cut(s) 231
PceI AGGCCT 1 cut(s) 122
PcsI WCGNNNNNNNCGW 2 cut(s) 251, 846
PdiI GCCGGC 1 cut(s) 1029
PfeI GAWTC 3 cut(s) 482, 682, 867
PkrI GCNGC 3 cut(s) 289, 543, 1026
PleI GAGTC 1 cut(s) 245
PpsI GAGTC 1 cut(s) 245
Ppu21I YACGTR 1 cut(s) 944
PshAI GACNNNNGTC 1 cut(s) 260
Psp124BI GAGCTC 1 cut(s) 840
Psp6I CCWGG 3 cut(s) 176, 257, 737
PspEI GGTNACC 2 cut(s) 262, 1039
PspFI CCCAGC 1 cut(s) 1090
PspGI CCWGG 3 cut(s) 176, 257, 737
PspN4I GGNNCC 6 cut(s) 373, 518, 657, 727, 878, 953
PspPI GGNCC 1 cut(s) 371
PstI CTGCAG 1 cut(s) 1083
PsuI RGATCY 2 cut(s) 804, 951
RsaI GTAC 2 cut(s) 878, 965
RsaNI GTAC 2 cut(s) 877, 964
SacI GAGCTC 1 cut(s) 840
SacII CCGCGG 1 cut(s) 819
SalI GTCGAC 1 cut(s) 848
SaqAI TTAA 4 cut(s) 18, 236, 416, 861
SatI GCNGC 3 cut(s) 288, 542, 1025
Sau3AI GATC 6 cut(s) 270, 425, 562, 587, 804, 951
Sau96I GGNCC 1 cut(s) 371
SchI GAGTC 1 cut(s) 245
ScrFI CCNGG 5 cut(s) 178, 259, 284, 649, 739
SduI GDGCHC 4 cut(s) 245, 302, 840, 1091
SfcI CTRYAG 1 cut(s) 1079
Sfr303I CCGCGG 1 cut(s) 819
SgrAI CRCCGGYG 1 cut(s) 1027
SgrBI CCGCGG 1 cut(s) 819
SmlI CTYRAG 2 cut(s) 81, 116
SmoI CTYRAG 2 cut(s) 81, 116
Sse9I AATT 8 cut(s) 315, 502, 535, 547, 599, 637, 889, 1072
SseBI AGGCCT 1 cut(s) 122
SstI GAGCTC 1 cut(s) 840
StuI AGGCCT 1 cut(s) 122
StyD4I CCNGG 5 cut(s) 176, 257, 282, 647, 737
StyI CCWWGG 1 cut(s) 158
TaaI ACNGT 1 cut(s) 921
TaiI ACGT 2 cut(s) 242, 946
TaqI TCGA 8 cut(s) 254, 345, 480, 561, 699, 771, 849, 870
TasI AATT 8 cut(s) 315, 502, 535, 547, 599, 637, 889, 1072
TauI GCSGC 1 cut(s) 1027
TfiI GAWTC 3 cut(s) 482, 682, 867
Tru1I TTAA 4 cut(s) 18, 236, 416, 861
Tru9I TTAA 4 cut(s) 18, 236, 416, 861
TscAI CASTG 3 cut(s) 712, 891, 924
TseFI GTSAC 3 cut(s) 262, 915, 1039
TseI GCWGC 2 cut(s) 287, 541
Tsp45I GTSAC 3 cut(s) 262, 915, 1039
TspDTI ATGAA 1 cut(s) 548
TspGWI ACGGA 1 cut(s) 1017
TspRI CASTG 3 cut(s) 712, 891, 924
XapI RAATTY 2 cut(s) 535, 889
XceI RCATGY 1 cut(s) 231
XmiI GTMKAC 1 cut(s) 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.