Prupe.8G165000_v2.0.a1
ERF Family

Belongs to the small GTPase superfamily. Rho family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17177302 .. 17180462
3161 bp
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UTR
Exon/CDS
Intron
Prupe.8G165000.1

Sequence Viewer

Length: 597 bp
ATGAGTGCCTCCAGGTTCATAAAGTGTGTCACAGTTGGGGACGGAGCGGTGGGCAAGACTTGCATGCTCATCTCCTACACCAGCAACACTTTCCCTACGGATTATGTGCCAACTGTGTTTGACAATTTCAGTGCAAATGTGGTTGTGGACGGGAGCACTGTTAATTTGGGATTGTGGGATACTGCTGGACAGGAAGATTACAATAGATTAAGACCACTGAGCTACCGTGGGGCAGATGTCTTCCTACTTGCATTCTCTCTCATAAGTAAGGCCAGCTATGAAAATATTGCCAAGAAATGGGTTCCTGAATTGAGGCATTATGCACCTGGTGTTCCAATTATTCTTGTTGGAACTAAGCTTGATCTTCGGGATGATAAGCAATTCTTTGTAGATCACCCTGGTGCAGTGCCAATTACCACAGCCCAGGGAGAGGAACTAAAGAAGCTGATTGGGGCTCCGGTTTACATCGAGTGTAGTTCAAAAACACAGCAGAATGTGAAAGCAGTCTTTGACGCAGCCATTAAAGTGGTTCTCCAGCCACCAAAACAGAAGAAGAAAAAGAAGAGAAAGGCACAGAAGGCCTGTTCTATATTGTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

199

Amino Acids

21.79

Weight (kDa)

9.37

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016490)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G35020 AT4G35020 AT4G35020
fragaria_vesca FvH4_2g01250
malus_domestica MD05G1121100.v1.1 MD10G1095000.v1.1
prunus_persica Prupe.8G165000_v2.0.a1
pyrus_communis pycom05g11530
rosa_chinensis RchiOBHm_Chr6g0251911
rosa_multiflora Rmu_ssc0000303.1_g000013
rosa_roxburghii Rroxscaffold_7G00216310
rosa_rugosa Rorug05G0504900
rosa_samantha Rh6BG014200
rosa_wichuraiana Rw6G001550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 297
AccBSI CCGCTC 1 cut(s) 47
AciI CCGC 1 cut(s) 47
AdeI CACNNNGTG 1 cut(s) 329
AfiI CCNNNNNNNGG 2 cut(s) 297, 430
AgsI TTSAA 1 cut(s) 480
AjnI CCWGG 4 cut(s) 11, 325, 397, 423
AleI CACNNNNGTG 1 cut(s) 399
AluBI AGCT 4 cut(s) 222, 276, 358, 445
AluI AGCT 4 cut(s) 222, 276, 358, 445
Alw21I GWGCWC 1 cut(s) 158
AoxI GGCC 2 cut(s) 270, 579
ApeKI GCWGC 1 cut(s) 515
AsuHPI GGTGA 1 cut(s) 386
BanII GRGCYC 1 cut(s) 457
BbsI GAAGAC 1 cut(s) 232
Bbv12I GWGCWC 1 cut(s) 158
BbvI GCAGC 1 cut(s) 527
BciT130I CCWGG 4 cut(s) 13, 327, 399, 425
BciVI GTATCC 1 cut(s) 172
BfuI GTATCC 1 cut(s) 172
BisI GCNGC 1 cut(s) 516
BlsI GCNGC 1 cut(s) 517
Bme1390I CCNGG 4 cut(s) 13, 327, 399, 425
BmiI GGNNCC 2 cut(s) 303, 456
BmrFI CCNGG 4 cut(s) 13, 327, 399, 425
BpiI GAAGAC 1 cut(s) 232
BpmI CTGGAG 1 cut(s) 518
BsaJI CCNNGG 4 cut(s) 226, 397, 423, 424
BsaWI WCCGGW 1 cut(s) 457
Bsc4I CCNNNNNNNGG 2 cut(s) 297, 430
BseBI CCWGG 4 cut(s) 13, 327, 399, 425
BseDI CCNNGG 4 cut(s) 226, 397, 423, 424
BseGI GGATG 1 cut(s) 376
BseLI CCNNNNNNNGG 2 cut(s) 297, 430
BseMII CTCAG 1 cut(s) 209
BseXI GCAGC 1 cut(s) 527
BsgI GTGCAG 1 cut(s) 423
BshFI GGCC 2 cut(s) 272, 581
BsiHKAI GWGCWC 1 cut(s) 158
BsiSI CCGG 1 cut(s) 458
BslFI GGGAC 1 cut(s) 53
BslI CCNNNNNNNGG 2 cut(s) 297, 430
BsmFI GGGAC 1 cut(s) 53
BsmI GAATGC 1 cut(s) 251
BsnI GGCC 2 cut(s) 272, 581
Bsp1286I GDGCHC 2 cut(s) 158, 457
Bsp143I GATC 2 cut(s) 361, 391
BspACI CCGC 1 cut(s) 47
BspANI GGCC 2 cut(s) 272, 581
BspCNI CTCAG 1 cut(s) 210
BspLI GGNNCC 2 cut(s) 303, 456
BsrBI CCGCTC 1 cut(s) 47
BssECI CCNNGG 4 cut(s) 226, 397, 423, 424
BssMI GATC 2 cut(s) 361, 391
Bst2UI CCWGG 4 cut(s) 13, 327, 399, 425
Bst4CI ACNGT 4 cut(s) 34, 115, 160, 227
Bst6I CTCTTC 1 cut(s) 557
BstAPI GCANNNNNTGC 1 cut(s) 60
BstC8I GCNNGC 2 cut(s) 65, 274
BstDEI CTNAG 2 cut(s) 218, 354
BstDSI CCRYGG 1 cut(s) 226
BstF5I GGATG 1 cut(s) 376
BstKTI GATC 2 cut(s) 364, 394
BstMBI GATC 2 cut(s) 361, 391
BstMWI GCNNNNNNNGC 2 cut(s) 60, 578
BstNI CCWGG 4 cut(s) 13, 327, 399, 425
BstNSI RCATGY 1 cut(s) 67
BstSCI CCNGG 4 cut(s) 11, 325, 397, 423
BstV1I GCAGC 1 cut(s) 527
BstV2I GAAGAC 1 cut(s) 232
BstXI CCANNNNNNTGG 1 cut(s) 526
BsuI GTATCC 1 cut(s) 172
BsuRI GGCC 2 cut(s) 272, 581
BtgI CCRYGG 1 cut(s) 226
BtsCI GGATG 1 cut(s) 376
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 4 cut(s) 136, 156, 215, 411
Cac8I GCNNGC 2 cut(s) 65, 274
CseI GACGC 1 cut(s) 521
CsiI ACCWGGT 1 cut(s) 325
CviAII CATG 1 cut(s) 64
DdeI CTNAG 2 cut(s) 218, 354
DpnI GATC 2 cut(s) 363, 393
DpnII GATC 2 cut(s) 361, 391
DraIII CACNNNGTG 1 cut(s) 329
Eam1104I CTCTTC 1 cut(s) 557
EarI CTCTTC 1 cut(s) 557
Eco147I AGGCCT 1 cut(s) 581
Eco24I GRGCYC 1 cut(s) 457
EcoRII CCWGG 4 cut(s) 11, 325, 397, 423
EcoT38I GRGCYC 1 cut(s) 457
FaeI CATG 1 cut(s) 67
FaiI YATR 7 cut(s) 20, 65, 105, 263, 279, 321, 590
FalI AAGNNNNNCTT 2 cut(s) 368, 400
FaqI GGGAC 1 cut(s) 53
FatI CATG 1 cut(s) 63
Fnu4HI GCNGC 1 cut(s) 516
FokI GGATG 1 cut(s) 383
FriOI GRGCYC 1 cut(s) 457
Fsp4HI GCNGC 1 cut(s) 516
GluI GCNGC 1 cut(s) 516
GsuI CTGGAG 1 cut(s) 518
HaeIII GGCC 2 cut(s) 272, 581
HapII CCGG 1 cut(s) 458
HgaI GACGC 1 cut(s) 521
Hin1II CATG 1 cut(s) 67
HindIII AAGCTT 1 cut(s) 356
HpaII CCGG 1 cut(s) 458
HphI GGTGA 1 cut(s) 386
Hpy166II GTNNAC 2 cut(s) 148, 463
Hpy188III TCNNGA 2 cut(s) 305, 368
Hpy8I GTNNAC 2 cut(s) 148, 463
HpyAV CCTTC 1 cut(s) 571
HpyCH4III ACNGT 4 cut(s) 34, 115, 160, 227
HpyCH4V TGCA 5 cut(s) 63, 134, 251, 323, 404
HpyF10VI GCNNNNNNNGC 2 cut(s) 60, 578
HpyF3I CTNAG 2 cut(s) 218, 354
Hsp92II CATG 1 cut(s) 67
Kzo9I GATC 2 cut(s) 361, 391
LmnI GCTCC 3 cut(s) 44, 153, 460
Lsp1109I GCAGC 1 cut(s) 527
MabI ACCWGGT 1 cut(s) 325
MaeIII GTNAC 1 cut(s) 28
MalI GATC 2 cut(s) 363, 393
MbiI CCGCTC 1 cut(s) 47
MboI GATC 2 cut(s) 361, 391
MboII GAAGA 6 cut(s) 206, 232, 356, 562, 565, 574
MhlI GDGCHC 2 cut(s) 158, 457
MluCI AATT 6 cut(s) 124, 163, 308, 336, 380, 411
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 3 cut(s) 19, 306, 424
MseI TTAA 3 cut(s) 162, 209, 522
MslI CAYNNNNRTG 2 cut(s) 399, 524
MspI CCGG 1 cut(s) 458
MspR9I CCNGG 4 cut(s) 13, 327, 399, 425
Mva1269I GAATGC 1 cut(s) 251
MvaI CCWGG 4 cut(s) 13, 327, 399, 425
MwoI GCNNNNNNNGC 2 cut(s) 60, 578
NdeII GATC 2 cut(s) 361, 391
NlaIII CATG 1 cut(s) 67
NlaIV GGNNCC 2 cut(s) 303, 456
NmuCI GTSAC 1 cut(s) 28
NspI RCATGY 1 cut(s) 67
OliI CACNNNNGTG 1 cut(s) 399
PaeI GCATGC 1 cut(s) 67
PasI CCCWGGG 1 cut(s) 424
PceI AGGCCT 1 cut(s) 581
PctI GAATGC 1 cut(s) 251
PflMI CCANNNNNTGG 1 cut(s) 297
PkrI GCNGC 1 cut(s) 517
Psp6I CCWGG 4 cut(s) 11, 325, 397, 423
PspGI CCWGG 4 cut(s) 11, 325, 397, 423
PspN4I GGNNCC 2 cut(s) 303, 456
RseI CAYNNNNRTG 2 cut(s) 399, 524
SaqAI TTAA 3 cut(s) 162, 209, 522
SatI GCNGC 1 cut(s) 516
Sau3AI GATC 2 cut(s) 361, 391
ScrFI CCNGG 4 cut(s) 13, 327, 399, 425
SduI GDGCHC 2 cut(s) 158, 457
SetI ASST 6 cut(s) 17, 224, 278, 328, 360, 447
SexAI ACCWGGT 1 cut(s) 325
SmiMI CAYNNNNRTG 2 cut(s) 399, 524
SphI GCATGC 1 cut(s) 67
Sse9I AATT 6 cut(s) 124, 163, 308, 336, 380, 411
SseBI AGGCCT 1 cut(s) 581
SsiI CCGC 1 cut(s) 47
SspI AATATT 1 cut(s) 286
StuI AGGCCT 1 cut(s) 581
StyD4I CCNGG 4 cut(s) 11, 325, 397, 423
TaaI ACNGT 4 cut(s) 34, 115, 160, 227
TaqI TCGA 1 cut(s) 468
TasI AATT 6 cut(s) 124, 163, 308, 336, 380, 411
Tru1I TTAA 3 cut(s) 162, 209, 522
Tru9I TTAA 3 cut(s) 162, 209, 522
TscAI CASTG 4 cut(s) 136, 163, 222, 411
TseFI GTSAC 1 cut(s) 28
TseI GCWGC 1 cut(s) 515
Tsp45I GTSAC 1 cut(s) 28
TspDTI ATGAA 2 cut(s) 7, 294
TspGWI ACGGA 2 cut(s) 57, 113
TspRI CASTG 4 cut(s) 136, 163, 222, 411
Van91I CCANNNNNTGG 1 cut(s) 297
XceI RCATGY 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.