Prupe.8G180500_v2.0.a1

homoserine

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18107283 .. 18110200
2918 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G180500.1

Sequence Viewer

Length: 1113 bp
ATGGCGATCTGCCACCAATCTCCTTTCAAACTCTTCACTACAATCCCATCATCATCTTCATCGTCGAAGCCCAAACCCCTTCTTAGATGTAACCTCTCCCTCCCCTCCAGACCCTCCCTCACCTCCACCGAACCCGAACCCGTCTACACCTCCGTCAAGGCCTTCGCGCCGGCCACAGTGGCCAATCTCGGCCCGGGCTTTGACTTCTTGGGCTGCGCCGTCGACGGCCTCGGCGACTTTGTCTCCCTTACCCTCGACCCGCAGGTCTCGCCGGGCGAGATCTCCATCTCTGAGATCTCGGGCGACCACAACTCGAAGAAGCTCAGCAAAAACCCGCTCTGGAACTGCGCGGGAATCGCAGCCATTGAAGTGATGAAGATGCTCGGAGTCCGCTCGGTCGGCCTCTCTCTCACTCTGGAAAAGGGACTCCCTTTGGGCTCCGGGCTCGGTTCCAGTGCGGCAAGCGCAGCTGCCGCCGCCGTTGCAGTCAACGAGATTTTCGGTGGAAAATTGGGGATCGATGAGCTTGTGATCGCGGGGCTGAAATCGGAGGAGAAGGTCTCTGGTTACCACGCCGATAATATCGCTCCGGCGATTATGGGAGGGTTTGTGTTGATTCGAAGCTACGATCCGTTGGATTTGATTCCGCTGATCTTTCCGGACGGTAAAGAACTGTTCTTTGTGTTGGCGACGCCAGAGTTTGAAGCTCCGACGAAGAAGATGAGGGCGGCGCTTCCGGCGGAGGTGGGGATGGCCCACCACGTCTGGAATTCGAGCCAGGCCGGGGCGCTGGTGGCGGCGGTGCTTCAAGGGGACTTGCCGGGGCTGGGAAGGGCCTTGTCAAGTGATAAGATCGTCGAGCCACGGCGGGCCCCGCTGATTCCCGGCATGGACGCCGTGAAGAAGGCGGCGATTGAGGCCAGGGCTTTCGGGTGTACGATAAGCGGGGCGGGGCCCACCGCGGTGGCGGTTACAGATGATCTTGAGAGAGGGAAAGCGATTGGGGAGAGAATGGTGGCGGCGTTTTTGAAGGAGGGAAAGTTGAAGGCGGCGGCGAGTGTGAGTAGGCTCGACCGGGTTGGTGCCAGACTTGTTAGTACCATTCCCAGATGA

Protein Analysis

371

Amino Acids

38.35

Weight (kDa)

8.21

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015166)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 263
Acc36I ACCTGC 1 cut(s) 253
AccB1I GGYRCC 1 cut(s) 1082
AccBSI CCGCTC 2 cut(s) 337, 393
AccI GTMKAC 2 cut(s) 144, 222
AccII CGCG 4 cut(s) 167, 350, 536, 962
AccIII TCCGGA 1 cut(s) 658
AclWI GGATC 2 cut(s) 524, 623
AcoI YGGCCR 2 cut(s) 171, 180
AcsI RAATTY 1 cut(s) 769
AcyI GRCGYC 2 cut(s) 692, 894
AfaI GTAC 2 cut(s) 937, 1099
AfiI CCNNNNNNNGG 2 cut(s) 784, 827
AgsI TTSAA 6 cut(s) 28, 368, 704, 809, 1030, 1045
AjiI CACGTC 1 cut(s) 763
AjnI CCWGG 2 cut(s) 777, 920
AleI CACNNNNGTG 1 cut(s) 962
AluBI AGCT 5 cut(s) 322, 470, 526, 624, 707
AluI AGCT 5 cut(s) 322, 470, 526, 624, 707
Alw26I GTCTC 3 cut(s) 247, 271, 565
AlwI GGATC 2 cut(s) 524, 623
Ama87I CYCGRG 2 cut(s) 193, 298
Aor13HI TCCGGA 1 cut(s) 658
ApaI GGGCCC 2 cut(s) 874, 957
ApeKI GCWGC 4 cut(s) 213, 359, 467, 470
ApoI RAATTY 1 cut(s) 769
AspLEI GCGC 6 cut(s) 169, 218, 350, 467, 733, 790
AspS9I GGNCC 7 cut(s) 191, 754, 834, 870, 871, 953, 954
AsuC2I CCSGG 8 cut(s) 194, 195, 273, 442, 784, 822, 885, 1076
AsuHPI GGTGA 1 cut(s) 112
AsuII TTCGAA 1 cut(s) 619
AvaI CYCGRG 2 cut(s) 193, 298
BaeGI GKGCMC 2 cut(s) 874, 957
BalI TGGCCA 1 cut(s) 182
BanI GGYRCC 1 cut(s) 1082
BanII GRGCYC 4 cut(s) 440, 447, 874, 957
BbvI GCAGC 4 cut(s) 200, 371, 457, 479
BccI CCATC 3 cut(s) 55, 293, 745
BceAI ACGGC 5 cut(s) 203, 241, 464, 881, 881
BciT130I CCWGG 2 cut(s) 779, 922
BcnI CCSGG 8 cut(s) 194, 195, 273, 442, 784, 822, 885, 1076
BcoDI GTCTC 3 cut(s) 247, 271, 565
BfoI RGCGCY 2 cut(s) 734, 791
BfuAI ACCTGC 1 cut(s) 253
BglI GCCNNNNNGGC 1 cut(s) 179
BglII AGATCT 2 cut(s) 279, 294
BlpI GCTNAGC 1 cut(s) 323
BmeT110I CYCGRG 2 cut(s) 193, 298
BmgBI CACGTC 1 cut(s) 763
BmgT120I GGNCC 7 cut(s) 191, 754, 834, 870, 871, 953, 954
BmiI GGNNCC 7 cut(s) 439, 451, 872, 873, 954, 955, 1084
BmsI GCATC 1 cut(s) 369
BplI GAGNNNNNCTC 2 cut(s) 545, 577
BpmI CTGGAG 1 cut(s) 91
Bpu1102I GCTNAGC 1 cut(s) 323
Bpu14I TTCGAA 1 cut(s) 619
BpuEI CTTGAG 1 cut(s) 1004
BpuMI CCSGG 8 cut(s) 194, 195, 273, 442, 784, 822, 885, 1076
Bsa29I ATCGAT 1 cut(s) 519
BsaBI GATNNNNATC 1 cut(s) 284
BsaHI GRCGYC 2 cut(s) 692, 894
BsaI GGTCTC 2 cut(s) 271, 565
BsaJI CCNNGG 7 cut(s) 193, 229, 783, 821, 863, 921, 960
BsaWI WCCGGW 1 cut(s) 658
BsaXI ACNNNNNCTCC 6 cut(s) 227, 257, 594, 624, 1025, 1055
Bsc4I CCNNNNNNNGG 2 cut(s) 784, 827
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 1 cut(s) 453
Bse8I GATNNNNATC 1 cut(s) 284
BseAI TCCGGA 1 cut(s) 658
BseBI CCWGG 2 cut(s) 779, 922
BseCI ATCGAT 1 cut(s) 519
BseDI CCNNGG 7 cut(s) 193, 229, 783, 821, 863, 921, 960
BseGI GGATG 1 cut(s) 756
BseJI GATNNNNATC 1 cut(s) 284
BseLI CCNNNNNNNGG 2 cut(s) 784, 827
BseMII CTCAG 2 cut(s) 282, 337
BseNI ACTGG 1 cut(s) 453
BseRI GAGGAG 1 cut(s) 566
BseSI GKGCMC 2 cut(s) 874, 957
BseXI GCAGC 4 cut(s) 200, 371, 457, 479
BseYI CCCAGC 1 cut(s) 826
Bsh1236I CGCG 4 cut(s) 167, 350, 536, 962
Bsh1285I CGRYCG 2 cut(s) 399, 1075
BshNI GGYRCC 1 cut(s) 1082
BshVI ATCGAT 1 cut(s) 519
BsiEI CGRYCG 2 cut(s) 399, 1075
BsiHKCI CYCGRG 2 cut(s) 193, 298
BslFI GGGAC 2 cut(s) 438, 827
BslI CCNNNNNNNGG 2 cut(s) 784, 827
BsmAI GTCTC 3 cut(s) 247, 271, 565
BsmFI GGGAC 2 cut(s) 438, 827
Bso31I GGTCTC 2 cut(s) 271, 565
BsoBI CYCGRG 2 cut(s) 193, 298
Bsp119I TTCGAA 1 cut(s) 619
Bsp120I GGGCCC 2 cut(s) 870, 953
Bsp1286I GDGCHC 4 cut(s) 440, 447, 874, 957
Bsp13I TCCGGA 1 cut(s) 658
Bsp143I GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
Bsp1720I GCTNAGC 1 cut(s) 323
BspCNI CTCAG 2 cut(s) 283, 336
BspDI ATCGAT 1 cut(s) 519
BspEI TCCGGA 1 cut(s) 658
BspFNI CGCG 4 cut(s) 167, 350, 536, 962
BspLI GGNNCC 7 cut(s) 439, 451, 872, 873, 954, 955, 1084
BspMI ACCTGC 1 cut(s) 253
BspPI GGATC 2 cut(s) 524, 623
BspT104I TTCGAA 1 cut(s) 619
BspT107I GGYRCC 1 cut(s) 1082
BspTNI GGTCTC 2 cut(s) 271, 565
BsrBI CCGCTC 2 cut(s) 337, 393
BsrFI RCCGGY 1 cut(s) 169
BsrI ACTGG 1 cut(s) 453
BssAI RCCGGY 1 cut(s) 169
BssECI CCNNGG 7 cut(s) 193, 229, 783, 821, 863, 921, 960
BssMI GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
BssNI GRCGYC 2 cut(s) 692, 894
Bst2UI CCWGG 2 cut(s) 779, 922
Bst4CI ACNGT 3 cut(s) 178, 665, 675
Bst6I CTCTTC 1 cut(s) 38
BstACI GRCGYC 2 cut(s) 692, 894
BstBI TTCGAA 1 cut(s) 619
BstC8I GCNNGC 3 cut(s) 171, 463, 870
BstDEI CTNAG 3 cut(s) 83, 291, 323
BstDSI CCRYGG 2 cut(s) 863, 960
BstEII GGTNACC 1 cut(s) 566
BstF5I GGATG 1 cut(s) 756
BstFNI CGCG 4 cut(s) 167, 350, 536, 962
BstH2I RGCGCY 2 cut(s) 734, 791
BstHHI GCGC 6 cut(s) 169, 218, 350, 467, 733, 790
BstKTI GATC 9 cut(s) 9, 282, 297, 519, 534, 631, 654, 855, 982
BstMAI GTCTC 3 cut(s) 247, 271, 565
BstMBI GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
BstMCI CGRYCG 2 cut(s) 399, 1075
BstNI CCWGG 2 cut(s) 779, 922
BstPI GGTNACC 1 cut(s) 566
BstSLI GKGCMC 2 cut(s) 874, 957
BstUI CGCG 4 cut(s) 167, 350, 536, 962
BstV1I GCAGC 4 cut(s) 200, 371, 457, 479
BstX2I RGATCY 2 cut(s) 279, 294
BstXI CCANNNNNNTGG 1 cut(s) 964
BstYI RGATCY 2 cut(s) 279, 294
Bsu15I ATCGAT 1 cut(s) 519
BsuTUI ATCGAT 1 cut(s) 519
BtgI CCRYGG 2 cut(s) 863, 960
BtrI CACGTC 1 cut(s) 763
BtsCI GGATG 1 cut(s) 756
BtsIMutI CAGTG 2 cut(s) 183, 460
BveI ACCTGC 1 cut(s) 253
Cac8I GCNNGC 3 cut(s) 171, 463, 870
CfoI GCGC 6 cut(s) 169, 218, 350, 467, 733, 790
Cfr10I RCCGGY 1 cut(s) 169
Cfr13I GGNCC 7 cut(s) 191, 754, 834, 870, 871, 953, 954
Cfr42I CCGCGG 1 cut(s) 963
Cfr9I CCCGGG 1 cut(s) 193
ClaI ATCGAT 1 cut(s) 519
CseI GACGC 2 cut(s) 700, 902
Csp6I GTAC 2 cut(s) 936, 1098
CviAII CATG 1 cut(s) 889
CviQI GTAC 2 cut(s) 936, 1098
DdeI CTNAG 3 cut(s) 83, 291, 323
DpnI GATC 9 cut(s) 8, 281, 296, 518, 533, 630, 653, 854, 981
DpnII GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
DrdI GACNNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 2 cut(s) 171, 180
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
EciI GGCGGA 1 cut(s) 755
Eco147I AGGCCT 1 cut(s) 161
Eco24I GRGCYC 4 cut(s) 440, 447, 874, 957
Eco31I GGTCTC 2 cut(s) 271, 565
Eco88I CYCGRG 2 cut(s) 193, 298
Eco91I GGTNACC 1 cut(s) 566
EcoO109I RGGNCCY 3 cut(s) 834, 871, 953
EcoO65I GGTNACC 1 cut(s) 566
EcoRI GAATTC 1 cut(s) 769
EcoRII CCWGG 2 cut(s) 777, 920
EcoT38I GRGCYC 4 cut(s) 440, 447, 874, 957
FaeI CATG 1 cut(s) 892
FaiI YATR 2 cut(s) 599, 890
FaqI GGGAC 2 cut(s) 438, 827
FatI CATG 1 cut(s) 888
FauI CCCGC 8 cut(s) 267, 342, 343, 529, 861, 882, 938, 943
FblI GTMKAC 2 cut(s) 144, 222
FokI GGATG 1 cut(s) 763
FriOI GRGCYC 4 cut(s) 440, 447, 874, 957
GlaI GCGC 6 cut(s) 168, 217, 349, 466, 732, 789
GsaI CCCAGC 1 cut(s) 830
GsuI CTGGAG 1 cut(s) 91
HaeII RGCGCY 2 cut(s) 734, 791
HgaI GACGC 2 cut(s) 700, 902
HhaI GCGC 6 cut(s) 169, 218, 350, 467, 733, 790
Hin1I GRCGYC 2 cut(s) 692, 894
Hin1II CATG 1 cut(s) 892
Hin6I GCGC 6 cut(s) 167, 216, 348, 465, 731, 788
HinP1I GCGC 6 cut(s) 167, 216, 348, 465, 731, 788
HincII GTYRAC 2 cut(s) 223, 490
HindII GTYRAC 2 cut(s) 223, 490
HinfI GANTC 6 cut(s) 354, 387, 426, 616, 643, 880
HphI GGTGA 1 cut(s) 112
Hpy166II GTNNAC 4 cut(s) 145, 223, 490, 936
Hpy188I TCNGA 4 cut(s) 292, 386, 550, 711
Hpy188III TCNNGA 6 cut(s) 108, 340, 416, 659, 766, 983
Hpy8I GTNNAC 4 cut(s) 145, 223, 490, 936
Hpy99I CGWCG 6 cut(s) 67, 224, 227, 694, 715, 860
HpyAV CCTTC 7 cut(s) 89, 172, 550, 825, 898, 1024, 1039
HpyCH4III ACNGT 3 cut(s) 178, 665, 675
HpyCH4IV ACGT 1 cut(s) 762
HpyCH4V TGCA 1 cut(s) 485
HpyF3I CTNAG 3 cut(s) 83, 291, 323
HpySE526I ACGT 1 cut(s) 762
Hsp92I GRCGYC 2 cut(s) 692, 894
Hsp92II CATG 1 cut(s) 892
HspAI GCGC 6 cut(s) 167, 216, 348, 465, 731, 788
Kpn2I TCCGGA 1 cut(s) 658
KroI GCCGGC 1 cut(s) 169
KroNI GCCGGC 1 cut(s) 171
KspI CCGCGG 1 cut(s) 963
Kzo9I GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
LmnI GCTCC 3 cut(s) 443, 592, 712
Lsp1109I GCAGC 4 cut(s) 200, 371, 457, 479
LweI GCATC 1 cut(s) 369
MaeII ACGT 1 cut(s) 762
MaeIII GTNAC 3 cut(s) 89, 566, 970
MalI GATC 9 cut(s) 8, 281, 296, 518, 533, 630, 653, 854, 981
MbiI CCGCTC 2 cut(s) 337, 393
MboI GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
MboII GAAGA 7 cut(s) 25, 48, 328, 388, 727, 730, 913
MflI RGATCY 2 cut(s) 279, 294
MhlI GDGCHC 4 cut(s) 440, 447, 874, 957
MlsI TGGCCA 1 cut(s) 182
MluCI AATT 2 cut(s) 509, 769
MluNI TGGCCA 1 cut(s) 182
MlyI GAGTC 2 cut(s) 396, 420
MmeI TCCRAC 2 cut(s) 615, 734
Mox20I TGGCCA 1 cut(s) 182
MroI TCCGGA 1 cut(s) 658
MroNI GCCGGC 1 cut(s) 169
MscI TGGCCA 1 cut(s) 182
MslI CAYNNNNRTG 2 cut(s) 368, 962
Msp20I TGGCCA 1 cut(s) 182
MspA1I CMGCKG 4 cut(s) 470, 649, 877, 962
MvaI CCWGG 2 cut(s) 779, 922
MvnI CGCG 4 cut(s) 167, 350, 536, 962
NaeI GCCGGC 1 cut(s) 171
NciI CCSGG 8 cut(s) 194, 195, 273, 442, 784, 822, 885, 1076
NdeII GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
NgoMIV GCCGGC 1 cut(s) 169
NlaIII CATG 1 cut(s) 892
NlaIV GGNNCC 7 cut(s) 439, 451, 872, 873, 954, 955, 1084
NmeAIII GCCGAG 2 cut(s) 168, 210
NspV TTCGAA 1 cut(s) 619
OliI CACNNNNGTG 1 cut(s) 962
PceI AGGCCT 1 cut(s) 161
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PdiI GCCGGC 1 cut(s) 171
PfeI GAWTC 4 cut(s) 354, 616, 643, 880
PflFI GACNNNGTC 1 cut(s) 239
PleI GAGTC 2 cut(s) 395, 420
PpsI GAGTC 2 cut(s) 395, 420
Psp6I CCWGG 2 cut(s) 777, 920
PspEI GGTNACC 1 cut(s) 566
PspFI CCCAGC 1 cut(s) 826
PspGI CCWGG 2 cut(s) 777, 920
PspN4I GGNNCC 7 cut(s) 439, 451, 872, 873, 954, 955, 1084
PspOMI GGGCCC 2 cut(s) 870, 953
PspPI GGNCC 7 cut(s) 191, 754, 834, 870, 871, 953, 954
PsuI RGATCY 2 cut(s) 279, 294
PsyI GACNNNGTC 1 cut(s) 239
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 2 cut(s) 937, 1099
RsaNI GTAC 2 cut(s) 936, 1098
RseI CAYNNNNRTG 2 cut(s) 368, 962
SacII CCGCGG 1 cut(s) 963
SalI GTCGAC 1 cut(s) 221
Sau3AI GATC 9 cut(s) 6, 279, 294, 516, 531, 628, 651, 852, 979
Sau96I GGNCC 7 cut(s) 191, 754, 834, 870, 871, 953, 954
SchI GAGTC 2 cut(s) 396, 420
SduI GDGCHC 4 cut(s) 440, 447, 874, 957
SfaNI GCATC 1 cut(s) 369
SfiI GGCCNNNNNGGCC 1 cut(s) 179
Sfr303I CCGCGG 1 cut(s) 963
SfuI TTCGAA 1 cut(s) 619
SgrBI CCGCGG 1 cut(s) 963
SgrDI CGTCGACG 1 cut(s) 221
SmaI CCCGGG 1 cut(s) 195
SmiMI CAYNNNNRTG 2 cut(s) 368, 962
SmlI CTYRAG 1 cut(s) 983
SmoI CTYRAG 1 cut(s) 983
SrfI GCCCGGGC 1 cut(s) 195
Sse9I AATT 2 cut(s) 509, 769
SseBI AGGCCT 1 cut(s) 161
StuI AGGCCT 1 cut(s) 161
TaaI ACNGT 3 cut(s) 178, 665, 675
TaiI ACGT 1 cut(s) 765
TaqI TCGA 9 cut(s) 65, 222, 255, 314, 519, 619, 773, 858, 1071
TaqII GACCGA 1 cut(s) 385
TasI AATT 2 cut(s) 509, 769
TauI GCSGC 9 cut(s) 461, 476, 479, 731, 800, 911, 1022, 1052, 1055
TfiI GAWTC 4 cut(s) 354, 616, 643, 880
TscAI CASTG 2 cut(s) 183, 460
TseI GCWGC 4 cut(s) 213, 359, 467, 470
TspDTI ATGAA 2 cut(s) 48, 389
TspGWI ACGGA 2 cut(s) 142, 621
TspMI CCCGGG 1 cut(s) 193
TspRI CASTG 2 cut(s) 183, 460
Tth111I GACNNNGTC 1 cut(s) 239
XapI RAATTY 1 cut(s) 769
XmaI CCCGGG 1 cut(s) 193
XmiI GTMKAC 2 cut(s) 144, 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.