Prupe.8G182800_v2.0.a1

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18228902 .. 18233085
4184 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G182800.1

Sequence Viewer

Length: 1650 bp
ATGAGTGGCGTCAGACAGAGGACCCTCGGGGGTGGGGGTCAGCATGTGTTAGACTATCTGAAACGAATGCAAGCAGAAAATCCTGCTTTCTTCTATGCAATTCAGAATGATAGTGATCACTCTAGTGGAAATATATTTTGGGTGGATTCAACAGCCAGGATGAACTATACATATTTTGGAGATACTGTTATATTTGACACCTCGTACAGGACAAACCGCTATAGGATACCGTTTGCCTCATTTTCTGGGCTTAATCATCATGGGCAGCCAGTGTTGTTTGGCTGTGCGTTAATTCTAAATGAGTCTGAGTCCTCATTCTTATGGCTGTTACAAACTTGGCTTCATGCAATGTCTGGACGCCACCCTGTCTCCATCACCACTGATCCAGAGAGGCACATACAAGTTGCAGTTGCGCAGGTTCTTCCTGAAACTCGCCATCGTTTCTGTAAGTGGGCCATATTTAGAGAAACACAAGAGAAACTAGATCATCTCTATCGTTCTCATCCTACTTTTGAGACTGAATTTAAGAAGTGCATCAATGAGAGTGAGACAGTAGATGAGTTTGAGTCACGTTGGGAATCATTGCTTCAAAGATACTACATCATGGATGATGAATGGCTTCAATCAATGTACAATGCTAGGCAACAGTGGGTCCCAGTGTACATGAGAGACACCTTCTTTGGAGAGTTTGCAGTAAGTGAGGGAAGTGAAAGTTTAACTTTGTTTTTTGATGGGTATGTGAATTCATCCACTACCATACAGGTTTTGCTTAAACAGTATGAGAAAGCTGTAGTTAGTTGGCATGAAAAGGAACTCAAAGCAGATTACGACACTACTAATACTATGCCTGTTTTGAAGACACCATCTCCTATGGAAAAACAAGCTGCAAACCTCTATACTAGGCGAATATTTAAGAAGTTCCAGGAGGAGTTGGTTGAGACCCTTGCAAATCCTGCAACAAAAGTTGATGACTCAGGAACTGTTGCCACCTATCGAGTGGCCAAATTTGGGGAAGACCACAAAGCCCATGCTGTTGATTTCAATTCTTTTGAGATGAAAGCTAGTTGTACGTGTCAAATGTTTGAATATTCAGGAATAATCTGTAGGCATGTACTAGCAGTTTTTAGGGCAAAAAATGTTCTTAGACTCCCTTCTCAATACGTATTGAAACGTTGGACTAGAAATGCCAAGAGTGGAGCTGTGGTGGATGAACATGCTTCTGAATTGCCAAACAATTCTAGAGAATCTGTAACAGTTAGGTATAACAATCTACGTCAGGAAGCAATCAAATATGTAGAAGAGGGAGCAAAATCTATCCACATTTATAATGTGGCAATGAATGCTCTACAGGAGGCTGCTAAGAAAGTTGCTTCTATAAAGAACCAAGGTTCTGGAGCTACTCAGGGTAGTTCCCTGGCCAATGGAGGTAGCCAGGAAATGCATTCAACGGAAGAAAATCAAACAACGGCATATCAGTCTTCGGATGAGAAGGAAAAGAAAATCCGTGAATTGTCTGCCGAGTTGGAGAATACCAACCAGCGGTGTGAAGTTTATCGAGCAAATCTGCTTGCTGTTCTACGAGACATGGAAGAGCAGAAGTTGAAGCTTTCAGTGAAGGTTCAAAGTGCAAGGCTAAGTCTGAAGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

550

Amino Acids

63.06

Weight (kDa)

6.52

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010639)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1326
Acc16I TGCGCA 1 cut(s) 414
Acc36I ACCTGC 1 cut(s) 406
AciI CCGC 2 cut(s) 217, 1540
AclI AACGTT 1 cut(s) 1171
AclWI GGATC 1 cut(s) 377
AcoI YGGCCR 2 cut(s) 999, 1416
AcsI RAATTY 3 cut(s) 521, 742, 1004
AcyI GRCGYC 2 cut(s) 9, 358
AfaI GTAC 5 cut(s) 206, 632, 662, 1069, 1113
AfiI CCNNNNNNNGG 3 cut(s) 207, 1008, 1539
AflIII ACRYGT 1 cut(s) 1070
AjnI CCWGG 4 cut(s) 155, 921, 1413, 1431
AjuI GAANNNNNNNTTGG 2 cut(s) 121, 153
AleI CACNNNNGTG 1 cut(s) 123
AluBI AGCT 6 cut(s) 788, 884, 1061, 1199, 1397, 1606
AluI AGCT 6 cut(s) 788, 884, 1061, 1199, 1397, 1606
Alw26I GTCTC 6 cut(s) 373, 509, 542, 663, 932, 1575
AlwI GGATC 1 cut(s) 377
AlwNI CAGNNNCTG 1 cut(s) 980
Ama87I CYCGRG 1 cut(s) 26
AoxI GGCC 3 cut(s) 453, 999, 1416
ApeKI GCWGC 3 cut(s) 265, 884, 1355
ApoI RAATTY 3 cut(s) 521, 742, 1004
ArsI GACNNNNNNTTYG 2 cut(s) 662, 694
Asp700I GAANNNNTTC 1 cut(s) 618
AspLEI GCGC 1 cut(s) 415
AspS9I GGNCC 3 cut(s) 21, 453, 652
AsuHPI GGTGA 1 cut(s) 367
AvaI CYCGRG 1 cut(s) 26
AvaII GGWCC 2 cut(s) 21, 652
BalI TGGCCA 2 cut(s) 1001, 1418
BbsI GAAGAC 3 cut(s) 863, 1020, 1470
BbvI GCAGC 3 cut(s) 277, 871, 1342
BccI CCATC 4 cut(s) 380, 444, 725, 871
BceAI ACGGC 1 cut(s) 1482
BciT130I CCWGG 4 cut(s) 157, 923, 1415, 1433
BciVI GTATCC 1 cut(s) 219
BclI TGATCA 1 cut(s) 115
BcoDI GTCTC 6 cut(s) 373, 509, 542, 663, 932, 1575
BfaI CTAG 8 cut(s) 123, 482, 639, 900, 1062, 1115, 1179, 1239
BfmI CTRYAG 4 cut(s) 220, 789, 1102, 1346
BfuAI ACCTGC 1 cut(s) 406
BfuI GTATCC 1 cut(s) 219
BisI GCNGC 3 cut(s) 266, 885, 1356
BlsI GCNGC 3 cut(s) 267, 886, 1357
Bme1390I CCNGG 4 cut(s) 157, 923, 1415, 1433
Bme18I GGWCC 2 cut(s) 21, 652
BmeT110I CYCGRG 1 cut(s) 26
BmgT120I GGNCC 3 cut(s) 21, 453, 652
BmiI GGNNCC 3 cut(s) 23, 653, 654
BmrFI CCNGG 4 cut(s) 157, 923, 1415, 1433
BmrI ACTGGG 1 cut(s) 650
BmsI GCATC 1 cut(s) 543
BmuI ACTGGG 1 cut(s) 650
BpiI GAAGAC 3 cut(s) 863, 1020, 1470
BpmI CTGGAG 1 cut(s) 1413
BsaAI YACGTR 2 cut(s) 1071, 1162
BsaBI GATNNNNATC 1 cut(s) 114
BsaHI GRCGYC 2 cut(s) 9, 358
BsaI GGTCTC 1 cut(s) 932
BsaJI CCNNGG 3 cut(s) 25, 1384, 1413
BsaXI ACNNNNNCTCC 8 cut(s) 171, 201, 353, 383, 850, 880, 1188, 1218
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 1008, 1539
Bse1I ACTGG 2 cut(s) 269, 656
Bse3DI GCAATG 3 cut(s) 354, 581, 1341
Bse8I GATNNNNATC 1 cut(s) 114
BseBI CCWGG 4 cut(s) 157, 923, 1415, 1433
BseDI CCNNGG 3 cut(s) 25, 1384, 1413
BseGI GGATG 6 cut(s) 165, 502, 613, 746, 1213, 1489
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 3 cut(s) 207, 1008, 1539
BseMI GCAATG 3 cut(s) 354, 581, 1341
BseMII CTCAG 3 cut(s) 297, 987, 1415
BseNI ACTGG 2 cut(s) 269, 656
BseRI GAGGAG 1 cut(s) 941
BseXI GCAGC 3 cut(s) 277, 871, 1342
BshFI GGCC 3 cut(s) 455, 1001, 1418
BsiHKCI CYCGRG 1 cut(s) 26
BslFI GGGAC 1 cut(s) 638
BslI CCNNNNNNNGG 3 cut(s) 207, 1008, 1539
BsmAI GTCTC 6 cut(s) 373, 509, 542, 663, 932, 1575
BsmFI GGGAC 1 cut(s) 638
BsmI GAATGC 3 cut(s) 72, 1345, 1441
BsnI GGCC 3 cut(s) 455, 1001, 1418
Bso31I GGTCTC 1 cut(s) 932
BsoBI CYCGRG 1 cut(s) 26
Bsp1407I TGTACA 2 cut(s) 630, 660
Bsp143I GATC 3 cut(s) 115, 382, 484
BspACI CCGC 2 cut(s) 217, 1540
BspANI GGCC 3 cut(s) 455, 1001, 1418
BspCNI CTCAG 3 cut(s) 298, 986, 1414
BspLI GGNNCC 3 cut(s) 23, 653, 654
BspMI ACCTGC 1 cut(s) 406
BspPI GGATC 1 cut(s) 377
BspQI GCTCTTC 1 cut(s) 1584
BspTNI GGTCTC 1 cut(s) 932
BsrDI GCAATG 3 cut(s) 354, 581, 1341
BsrGI TGTACA 2 cut(s) 630, 660
BsrI ACTGG 2 cut(s) 269, 656
BssECI CCNNGG 3 cut(s) 25, 1384, 1413
BssMI GATC 3 cut(s) 115, 382, 484
BssNI GRCGYC 2 cut(s) 9, 358
BssT1I CCWWGG 1 cut(s) 1384
Bst2UI CCWGG 4 cut(s) 157, 923, 1415, 1433
Bst4CI ACNGT 7 cut(s) 187, 231, 553, 648, 777, 982, 1255
Bst6I CTCTTC 2 cut(s) 1293, 1584
BstACI GRCGYC 2 cut(s) 9, 358
BstAPI GCANNNNNTGC 2 cut(s) 953, 1340
BstAUI TGTACA 2 cut(s) 630, 660
BstBAI YACGTR 2 cut(s) 1071, 1162
BstC8I GCNNGC 2 cut(s) 72, 1569
BstDEI CTNAG 6 cut(s) 306, 973, 1142, 1359, 1401, 1634
BstENI CCTNNNNNAGG 1 cut(s) 205
BstF5I GGATG 6 cut(s) 165, 502, 613, 746, 1213, 1489
BstHHI GCGC 1 cut(s) 415
BstKTI GATC 3 cut(s) 118, 385, 487
BstMAI GTCTC 6 cut(s) 373, 509, 542, 663, 932, 1575
BstMBI GATC 3 cut(s) 115, 382, 484
BstMWI GCNNNNNNNGC 2 cut(s) 953, 1340
BstNI CCWGG 4 cut(s) 157, 923, 1415, 1433
BstNSI RCATGY 3 cut(s) 47, 1112, 1217
BstSCI CCNGG 4 cut(s) 155, 921, 1413, 1431
BstSFI CTRYAG 4 cut(s) 220, 789, 1102, 1346
BstSNI TACGTA 1 cut(s) 1162
BstV1I GCAGC 3 cut(s) 277, 871, 1342
BstV2I GAAGAC 3 cut(s) 863, 1020, 1470
BstXI CCANNNNNNTGG 1 cut(s) 1391
BsuI GTATCC 1 cut(s) 219
BsuRI GGCC 3 cut(s) 455, 1001, 1418
BtsCI GGATG 6 cut(s) 165, 502, 613, 746, 1213, 1489
BtsIMutI CAGTG 5 cut(s) 276, 378, 653, 663, 1617
BveI ACCTGC 1 cut(s) 406
Cac8I GCNNGC 2 cut(s) 72, 1569
CaiI CAGNNNCTG 1 cut(s) 980
CfoI GCGC 1 cut(s) 415
Cfr13I GGNCC 3 cut(s) 21, 453, 652
CseI GACGC 1 cut(s) 366
Csp6I GTAC 5 cut(s) 205, 631, 661, 1068, 1112
CviQI GTAC 5 cut(s) 205, 631, 661, 1068, 1112
DdeI CTNAG 6 cut(s) 306, 973, 1142, 1359, 1401, 1634
DpnI GATC 3 cut(s) 117, 384, 486
DpnII GATC 3 cut(s) 115, 382, 484
EaeI YGGCCR 2 cut(s) 999, 1416
Eam1104I CTCTTC 2 cut(s) 1293, 1584
EarI CTCTTC 2 cut(s) 1293, 1584
Eco105I TACGTA 1 cut(s) 1162
Eco130I CCWWGG 1 cut(s) 1384
Eco31I GGTCTC 1 cut(s) 932
Eco47I GGWCC 2 cut(s) 21, 652
Eco88I CYCGRG 1 cut(s) 26
EcoNI CCTNNNNNAGG 1 cut(s) 205
EcoO109I RGGNCCY 2 cut(s) 21, 652
EcoRI GAATTC 1 cut(s) 742
EcoRII CCWGG 4 cut(s) 155, 921, 1413, 1431
EcoT14I CCWWGG 1 cut(s) 1384
EcoT22I ATGCAT 1 cut(s) 1443
ErhI CCWWGG 1 cut(s) 1384
FalI AAGNNNNNCTT 2 cut(s) 703, 735
FaqI GGGAC 1 cut(s) 638
FbaI TGATCA 1 cut(s) 115
Fnu4HI GCNGC 3 cut(s) 266, 885, 1356
FokI GGATG 6 cut(s) 172, 489, 620, 733, 1220, 1496
Fsp4HI GCNGC 3 cut(s) 266, 885, 1356
FspBI CTAG 8 cut(s) 123, 482, 639, 900, 1062, 1115, 1179, 1239
FspI TGCGCA 1 cut(s) 414
GlaI GCGC 1 cut(s) 414
GluI GCNGC 3 cut(s) 266, 885, 1356
GsuI CTGGAG 1 cut(s) 1413
HaeIII GGCC 3 cut(s) 455, 1001, 1418
HgaI GACGC 1 cut(s) 366
HhaI GCGC 1 cut(s) 415
Hin1I GRCGYC 2 cut(s) 9, 358
Hin6I GCGC 1 cut(s) 413
HinP1I GCGC 1 cut(s) 413
HindIII AAGCTT 1 cut(s) 1604
HinfI GANTC 8 cut(s) 146, 302, 308, 566, 578, 971, 1146, 1244
HphI GGTGA 1 cut(s) 367
Hpy166II GTNNAC 1 cut(s) 661
Hpy188I TCNGA 7 cut(s) 14, 60, 105, 307, 1222, 1483, 1641
Hpy188III TCNNGA 8 cut(s) 354, 386, 425, 975, 1092, 1239, 1277, 1392
Hpy8I GTNNAC 1 cut(s) 661
HpyAV CCTTC 5 cut(s) 685, 1161, 1483, 1609, 1636
HpyCH4III ACNGT 7 cut(s) 187, 231, 553, 648, 777, 982, 1255
HpyCH4IV ACGT 5 cut(s) 571, 1070, 1161, 1171, 1273
HpyF10VI GCNNNNNNNGC 2 cut(s) 953, 1340
HpyF3I CTNAG 6 cut(s) 306, 973, 1142, 1359, 1401, 1634
HpySE526I ACGT 5 cut(s) 571, 1070, 1161, 1171, 1273
Hsp92I GRCGYC 2 cut(s) 9, 358
HspAI GCGC 1 cut(s) 413
KflI GGGWCCC 1 cut(s) 652
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 3 cut(s) 115, 382, 484
LguI GCTCTTC 1 cut(s) 1584
LmnI GCTCC 3 cut(s) 1196, 1304, 1394
Lsp1109I GCAGC 3 cut(s) 277, 871, 1342
LweI GCATC 1 cut(s) 543
MaeI CTAG 8 cut(s) 123, 482, 639, 900, 1062, 1115, 1179, 1239
MaeII ACGT 5 cut(s) 571, 1070, 1161, 1171, 1273
MaeIII GTNAC 3 cut(s) 327, 567, 1249
MalI GATC 3 cut(s) 117, 384, 486
MboI GATC 3 cut(s) 115, 382, 484
MboII GAAGA 8 cut(s) 82, 413, 868, 1025, 1310, 1463, 1470, 1601
MlsI TGGCCA 2 cut(s) 1001, 1418
MluCI AATT 9 cut(s) 99, 291, 521, 742, 1004, 1042, 1223, 1234, 1508
MluNI TGGCCA 2 cut(s) 1001, 1418
MlyI GAGTC 5 cut(s) 311, 317, 575, 965, 1140
MmeI TCCRAC 2 cut(s) 1154, 1503
Mox20I TGGCCA 2 cut(s) 1001, 1418
Mph1103I ATGCAT 1 cut(s) 1443
MroXI GAANNNNTTC 1 cut(s) 618
MscI TGGCCA 2 cut(s) 1001, 1418
MseI TTAA 6 cut(s) 252, 290, 525, 716, 771, 912
MslI CAYNNNNRTG 2 cut(s) 123, 319
Msp20I TGGCCA 2 cut(s) 1001, 1418
MspA1I CMGCKG 1 cut(s) 1540
MspR9I CCNGG 4 cut(s) 157, 923, 1415, 1433
Mva1269I GAATGC 3 cut(s) 72, 1345, 1441
MvaI CCWGG 4 cut(s) 157, 923, 1415, 1433
MwoI GCNNNNNNNGC 2 cut(s) 953, 1340
NdeII GATC 3 cut(s) 115, 382, 484
NlaIV GGNNCC 3 cut(s) 23, 653, 654
NmeAIII GCCGAG 1 cut(s) 1543
NmuCI GTSAC 1 cut(s) 567
NsbI TGCGCA 1 cut(s) 414
NsiI ATGCAT 1 cut(s) 1443
NspI RCATGY 3 cut(s) 47, 1112, 1217
OliI CACNNNNGTG 1 cut(s) 123
PciSI GCTCTTC 1 cut(s) 1584
PctI GAATGC 3 cut(s) 72, 1345, 1441
PdmI GAANNNNTTC 1 cut(s) 618
PfeI GAWTC 3 cut(s) 146, 578, 1244
PfoI TCCNGGA 1 cut(s) 921
PkrI GCNGC 3 cut(s) 267, 886, 1357
PleI GAGTC 5 cut(s) 310, 316, 574, 965, 1140
PpsI GAGTC 5 cut(s) 310, 316, 574, 965, 1140
Ppu21I YACGTR 2 cut(s) 1071, 1162
PpuMI RGGWCCY 2 cut(s) 21, 652
PsiI TTATAA 1 cut(s) 1326
Psp1406I AACGTT 1 cut(s) 1171
Psp5II RGGWCCY 2 cut(s) 21, 652
Psp6I CCWGG 4 cut(s) 155, 921, 1413, 1431
PspGI CCWGG 4 cut(s) 155, 921, 1413, 1431
PspN4I GGNNCC 3 cut(s) 23, 653, 654
PspPI GGNCC 3 cut(s) 21, 453, 652
PspPPI RGGWCCY 2 cut(s) 21, 652
PstNI CAGNNNCTG 1 cut(s) 980
RsaI GTAC 5 cut(s) 206, 632, 662, 1069, 1113
RsaNI GTAC 5 cut(s) 205, 631, 661, 1068, 1112
RseI CAYNNNNRTG 2 cut(s) 123, 319
SapI GCTCTTC 1 cut(s) 1584
SaqAI TTAA 6 cut(s) 252, 290, 525, 716, 771, 912
SatI GCNGC 3 cut(s) 266, 885, 1356
Sau3AI GATC 3 cut(s) 115, 382, 484
Sau96I GGNCC 3 cut(s) 21, 453, 652
SchI GAGTC 5 cut(s) 311, 317, 575, 965, 1140
ScrFI CCNGG 4 cut(s) 157, 923, 1415, 1433
SfaNI GCATC 1 cut(s) 543
SfcI CTRYAG 4 cut(s) 220, 789, 1102, 1346
SinI GGWCC 2 cut(s) 21, 652
SmiMI CAYNNNNRTG 2 cut(s) 123, 319
SnaBI TACGTA 1 cut(s) 1162
Sse9I AATT 9 cut(s) 99, 291, 521, 742, 1004, 1042, 1223, 1234, 1508
SsiI CCGC 2 cut(s) 217, 1540
SspI AATATT 2 cut(s) 909, 1088
SspMI CTAG 8 cut(s) 123, 482, 639, 900, 1062, 1115, 1179, 1239
StyD4I CCNGG 4 cut(s) 155, 921, 1413, 1431
StyI CCWWGG 1 cut(s) 1384
TaaI ACNGT 7 cut(s) 187, 231, 553, 648, 777, 982, 1255
TaiI ACGT 5 cut(s) 574, 1073, 1164, 1174, 1276
TaqI TCGA 2 cut(s) 994, 1555
TasI AATT 9 cut(s) 99, 291, 521, 742, 1004, 1042, 1223, 1234, 1508
TatI WGTACW 3 cut(s) 630, 660, 1111
TfiI GAWTC 3 cut(s) 146, 578, 1244
Tru1I TTAA 6 cut(s) 252, 290, 525, 716, 771, 912
Tru9I TTAA 6 cut(s) 252, 290, 525, 716, 771, 912
TscAI CASTG 5 cut(s) 276, 385, 653, 663, 1617
TseFI GTSAC 1 cut(s) 567
TseI GCWGC 3 cut(s) 265, 884, 1355
Tsp45I GTSAC 1 cut(s) 567
TspDTI ATGAA 8 cut(s) 176, 332, 627, 735, 819, 1070, 1224, 1352
TspGWI ACGGA 2 cut(s) 1463, 1493
TspRI CASTG 5 cut(s) 276, 385, 653, 663, 1617
VpaK11BI GGWCC 2 cut(s) 21, 652
XagI CCTNNNNNAGG 1 cut(s) 205
XapI RAATTY 3 cut(s) 521, 742, 1004
XbaI TCTAGA 1 cut(s) 1238
XceI RCATGY 3 cut(s) 47, 1112, 1217
XcmI CCANNNNNNNNNTGG 1 cut(s) 994
XmnI GAANNNNTTC 1 cut(s) 618
XspI CTAG 8 cut(s) 123, 482, 639, 900, 1062, 1115, 1179, 1239
Zsp2I ATGCAT 1 cut(s) 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.