Rorug06G0141800

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0010639
Physical Location & Seq
Forward (+)
20129970 .. 20141178
11209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0141800.1

Sequence Viewer

Length: 6852 bp
ATGCTGGCTTCAGTTCACCATCATCCTATTCCTGCCTTTGCAAGCTCCTTCCTGTTCCCCTGCTCACATGGGTATCCTAGTCCAAGAAGGCAATCTCCACCAACTGGGTTGCACTTGAACAGAGCTCTGATCAAACTGAGAAGACCAAGAGGTCCAAGGCCAATGGCTTTTGGGAGCAACGGAGGTGAACCTGAAGTTGGGGAGCGGCTTTATCTGGGACTGGACTTTGGGACTTCTGGAGCGAGGTTTGCCCTTATCGATAAACGAGGGATAGTTCATGCTGAGGGAAAGAGAGAATACCCTCTTTTTATGAGTGAAGAAAAAATGGATTGGGCCCGTTCATGGAAGGCCACACTCTTCTCACTTCTTGGAGACATTCCATCTCATCTTCGTAAACTGATTGCTTCCATTTCCATTGATGGGACTTCTGCAACTACTCTCATTGTTGACAGCAACACAGGAGAGCCGTTATGGAGACCTTTCCTCTACAATGAGAGCTGCCCTGATGCTTTACCGACGGTTAAATCCATTGCTCCTCCAAACCATACAGTCTGCTCTGGTTCCTCTACTCTGTGCAAGCTTGTCTCCTGGTGGGAGAATGATGATCCAAATAAAAAATCTGCACTACTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAACTCGGAGTGTCTGATTATAATAATGCTCTGAAGGTTGGTTATGATCCTGAGCTTGAATCCTATCCACCCTGGCTACTCTCTCAGCCCTATTCACAACTTTTACCTTCTGTTAGAGCTCCTGGAACTTCAATCGGTCATTTGAAAGAGGACATTAGATCGGATTTTGGTTTTCCAAGTGATTGTGCTGTATGCACAGGAACCACTGATAGTATAGCAGCTTTTTTAGCAGCTCGTGCAACACAACCTGGGAAAGCTGTAACTTCTTTGGGTTCAACACTTGCCATAAAACTGCTGAGCACTACTAGGATTGAGGATGCACGGTTTGGGGTGTATAGTCATCGCCTTGATGATAAGTGGCTTGTTGGAGGTGCTTCAAATACTGGTGGAGCAGTTCTTAGACAAATTTTCACTGACGAGCAACTGGAGAAATTGAGTGAACAGATTGATCCCATGGAAGCTTCTCCTCTAGACTACTACCCACTGCAATCAGTTGGAGAGAGATTTCCAGTGGCAGATCCGAATATGGCTCCAAGATTACACCCACGTCCAGAAAGTGAGGCGGAGTTTTTGCATGGGATTCTTGAATCCATTGCGCGTATAGAGGCAAAAGCTTACAACTTACTCAAGGAACTAGGCGCAACCCAAGTTGATGAAGTGCTCACAGCCGGCGGTGGTGCGAGAAATGAGAAATGGACAAAGATTAGAGAGAGAGTACTTGGTTTGCCTATTGGAGCTGAAATCAATATCTGTATCCATTATCCAGAGGACATGGGGTTTGTGTTAGAAATTGGAGTTCAAATCAGGAAATCTGTGACCACATCACTCAGAACATGTTACAGATCACTTTTCCATCATCCATTTCTTGTGGCATTTCTGCTTTTCTTGACATTTCTGCAGAGATTCTTTCCCTTTGCTTTTTCTGTTTTGGTGACTGCATCCCCTGTTTTGGTCTGCTCTGTTGTTCTTCTTGGGACCCTTTTGATTTTCGGCCAGCCAGAATTACCTGAAACCAAAAGGCAAAAGAAGATTACCCATGATTTTGCTTCTCTTAGAACCCGGATTTCAGCGGATGAGGCTGTTACTTTGGAGAGGAATGGGAGGTTTTCTATAGATAAGGTCTCAGGAAAGAGTTTAGATGAAGTGAGTTGCAGTAGATACAGTAGTGATCGTGAAGGTTCAATTGGTTATGTGCCTCTTATTGATGAGACATTTCATTACACCGAGAGTGAGAAGAGAGAATTAAATAGTAAGGAGCTGGAGAACCAGAGAGTCATTCATAAGCAGAAATTCAGGATTGATGCCATGACAAGGAATGTGGAAGCTATTGAGAAGTCGGCTTCCCTCAAAGGTGATCACTCGGAGTCTTCACAGGGTGGCGGTGGTGGTGATGATGAGGCTTCAGATTCTGGCTCAGACCAAGCAGAGAGTTCGTCACCAGATGCTTCAATAGCAGACATCCTTCCAATTCTTGATGAGCTACACCCACTTTTAGACTTAGATGCTCCACTACCTGCTCATATGTCCCCTGATGATTCTGGGGTTGGCTCTGATAGGAGTAATGATGGCAGTAATGAGTCAGATGATGAGGATACTGAAATCCGGGGTCGAGGAGTAGAAGAGTATGGGGTTGATGATAATGATGGCGATGAGGAAGAAGCACATGATGGTAAAGAGGATGAAAGCAAATCTGCAATCAAGTGGACAGAGGATGACCAAAAGAATCTCAGGGACTTGGGGAATTTGGAGCTTGAAAGGAACCGATGCTTGGAGAACCTTATTACAAGGAGAAGTGCATCGAAAAGACAGAACCCTGAGAAGAATCTGATAGATTTAGATACTTCTGAAAATCCCTTTAATATAACACAAATTTCGACAACAAGACACAACCCTTTTGATCTCTCACATGATTCCTATGATGATATGGGGTTGCCACCCATTCCTGGTTCTGCTCCATCTACTTACTTACCAGGAAGAAACCCCTTTGATCTTCTGTATGAGCCAAATGAAGAAAAACCTGAGCTCAAGGGAGATCATGTTGAGCAAGAATTTGCGACAGTTGTCCTCAATAATACATTCTTTTGCAGGCATGCAAGCATTAGACCATCTAGGTTAGGGGATGCCAGGCAAGAGAGGCAAGATCTTAAATGGAGACCTGTTTTTGTACCAGAACAGTTGGCTTCAGAAGAAACAAGCTATTGCTCATTCCAAAGATTACCAAGAGAAGCTAGTGATTCCAAGTTGAGTTCCATTCCTGATATTGAGTCAGTGAGTTCCGGAGAAGATCTGGATGAAAGGAAGTTCAATGAGCGCGTTAAAGAAGCAGAAGTGATCTCCAATATATACCAAGCTTCTGAGCTTGTTGACCATAGAAGGCATTCTTCTGAAGATCTAGATCATCTGGAAATGGAACGGCCTGGGAAAAAAGATGTCCAGCATGATGAGCCGGAAATAAAATTGGGCCAGGTGGAGAATGGGAATGCAAGCTTGTCTGGTACAGGAGGATTTGTTATTCCTGTGGAACCTATTACTAATGCAACTTATTTGAAACCAGAAGCATTTGAAGATAAAAACAGCAGTAGGTCAAGCTTGTCATCGTCATCAGAAGCAGATGAAAAATCTTCAGATTTGAGGAAAGATGGATCAAAATTTTTTGAGCCATTTGAGACAGAAGTGCAAACTACGAGTGGAATGCTGGATGACAATCAACATAAGGAGCCAGTCTATGACACAAGCCCCCCAGCATCTGCTAAGGTCCTTTCCTTTAACTCCATTTCTTCTGATATTCAAGCAGAAATATCTGAAGTGGTTACACTTCCATCATTGGCTGAAATGCGTGTTCCCTCCGTAGACCAAGCCACAGATTCAGACTTTCATGGTAAAATCATAGAAGAGGGTACTTCAGGTAATGAACAGATTGGTGCCACCTCACATGTACGTGCATCAGTTGAAAATGGAAGAGATCCTGGGGAATGCAACCGGCTCTTCTTAACAGCTTCTCATTCAGATGTAAATGATGATCTCCCTAAGAATTTGAATGTGAAAGCAGCTTTTACAGACTCTAGTCCTCAGTATGTTTCTTCGAAAGATAAAATGCCAGCAGAGGAGAAAAACTTATTCTTGTCCGATATGCCATCTTTTGATGATCATTTTGCATTTCCTGAACCACGTATCATCTTATCAGAGTCAAAAGAAGATTCAAGCATCAAGGACTTAAATGCAGTTGGAGTCCCAGACCCCCCTGTGGGTGTAAAATCCACCTCAAGCAAGGTGATAGAATCAAGCAACGAAGCATCTGGTGTCCAACAAACTATCAGTACTCATATTGCTATGGAGCAAGTCTCAGAAGCTAATGAGCTGCCAAAGCCATCAAATTCAAAAGATGGGTCAGTGGAAGTAGGAACTACTGCAGTGGATTCTACGAAGGAGATTGCATCAAGCAATGCAGGAACAAGTATTCAAGGAACTGTCACGCCTCATGTTTCTCCAAAGCAATTCTCAGAAGCTAATGTTGGTGAGCAGACACAACCATCAAATTCAAAAGATAAATCGTCAAAAGTGGAAACTAGTACAAAGGGTTCTACCAAGGAGATTGCATCAAGCAACACAGAAACTGGTGTTAAAGAACCTATTGCTACTCCTAATTCTCTGAAGGAAGTCTCAAAAACTGGTGTCAAAGAACCGGTCACTACTCCTAATTCTCCAAAGAAAGTCTCAGAAAATAATGATCCTGTGCTGCCTATTTCATCAAAATTCAAGGATGGGTCAACAGAATTAGGAACCAAAACTTCTCCGAAGAAAGTCTCAGAAGCTAATGATCGTGAGGTGCCTAAACCATCAAATTCAAAGGATGGGTCGACAGAATTTGGAACCAATGCAATGGGCACTACCAAGGAGATTACATCAATTAATATAGGAACTGCTGTTCAGGAAACAGTTACCACTGATCATGCTCCTAAGGAGGTTTCAGAAGATAATGTTGGTGAGCTGCCAAAACTATCAAATCCAAAAGATGGATCTACAGACGTTGGAAATAATACAGTGGGTTCTACCAAGGACATTGCACTAAGCAGTACAGGATCTGGTGTTCAAGAAACTGCTGAAACTCCTCTGAAGCAAGTCTCAGAAAGTGATGTCAGTAAGCTGCCAAAATTGTCAAAGGACATTGCATTAAGCAATACTGGATCTGGTGTTCAAGAAACTGCCACTACTCCTGTGAAAGAAGTCTCAAAAACTGATGTCAGTGAGTTGCCAAAATCGTCAAAGGATGAACTAGCAAAAGTAGCAACTAATGATGCAGTTGGTTCTACCACGAGTCTTCAAGAAACTGCCCCTACTCTTCCGAAGCAAATCTCCAAAGGTGATCTCAGTGAGTTGCCAAAATCATCAAATTCAAAGGATGGATCAAATAAAATAGAAAGTAATGCAGTGGGTTCTGCCAAGGAGATTGCATCAAATACTATAGGAACTGGTGTTCAAGAAACTGTCTCTACTCAAACTCCTGTAAAGGAATTATTAGAAGTTAATGTTGGAGACCAGCCAAAACCATCAGATTCAAAAGATGAACATAAAGAAATAGAAATTAATGCAGTGAGTTTTACAAAGGGGACTGCATCAAAAAATGCCAGATCTGGTGTAAAAGAAACAGTTACTACTGACCAAAGGAAAGTCTCAGAAGGTAATTTAATTGAGCTGCCAAAAAGGTCGAATTCAAAGGATGAATCATTGGAAGTAGCAACTAGTAATGCAGTGGGTTCTACTAAGAATGTACAAGAGACTGCCAGTAATCCTTTGGAAGAAGTTTCAGAAGGTAATGTCTTTGAGCTGCCAAAACCTTCAAACTCAAAGGATGGATCACCAGGAGTAACTAATGCAGTGAATTCTACCAACAGTGTTCAAGATACTAATGTCGGTGAGCTTCCAAAACCTTCAAATGCAAAGGATGGATTGACAGAAGTAAGAACTAATGCAGTGGATTCTACCAAGAAGCTTGCATCAAGCAACACAGGAACTTGTGTGCAAGAAGGTAACACCGCTCATACTGCTAAACAAGTGTCAGAAGGTAATCTCTCTGAGCTGCCAACACCATCACATTTAAATGACGGATCAGCAGAAGTAGGAACTAATGCAGTGGGTTCTACCAAGAACGTTGAAGAAACTGCTACTCTGAAGCAAGTTTCAGAAGGTAATATCAACGAGCTGCTAAAACCTTCAGACTTAAAGGATGGATCACCAGAAGTAACTGGTGCAGTGGATTCTACCAAGAGTGTTCAAGATACTAACGTCGGTGAGCTCCCAAAACCTTCAAATGCAAAGGATGGATCGACAGAAGTAATAACTAATGCAGTTGATTCTACCAAGAAGCTTGCATCAAGCAACATGGAAAGTAATGTGCAAGAAGGTATCACTGCTCATACTGCTCAACAAGTGTCAGAAGGTAGTCTCTCTGAGCTGCCGACACCATCACATTTAAATGACGGATCAGAAGAAGTAGGATCTAATGCAGTGGGTTCTACCAAGAGTGTTGAAGAAACCGTAACTACTCAGAAGCAAGTTTCAGAAGGTAATATCAACGAGCTGCCAAAACCTTTAGACTTAAAGGATGGATCGACCAAAGTGCTGAATACAGTCAGTTCTACCAAGAGTGTTCAAGAAACAATCACTATAAAAAAAGTTTCAGAAGGTAATGACGGTGAGCTTCAAAAACCTTCAAAGGATGGATCAACAGAAGTAGGAACTAATGTAGTTGATTCTACCAAGAAACTTGGAACTAGTGTACAAGAAAGTATCACTGCTCATACTAAAAATAAAGTTGCAGAAGGTGGTGTTGGTGAGCTTCCCAAATCATCAAATTTAAAGGATGAATTACCAAAAGTAGGAGTTGATGCAGTTGGTTCCTCCAAGGACATTCCATCGAGCAACACAGAATCTGGTGTTCAAGAAAGTATCACTACTTCAGAAGGTGATGTTGCTGAGTTGCCAAGACCATCGAATTCGGATGGTCATGTTGGTGAGGTTCTAAAACCATCTATTTCAGAAGAAAGTAATGCGGGTGAATTGACAAAACCAACAAATCCAAAGGAAAGTAATGCGGGTGAGTCGCAAAAACCACCAGATCCAAAGGAAAGTAATGCTGGTGAGTCGCAAAAAACACCAGAATCAAAAGGATGGTTATGGTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MULE SWIM

Protein Analysis

2283

Amino Acids

245.94

Weight (kDa)

4.91

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_N PF00370 70 - 299 3.4e-09 FGGY family of carbohydrate kinases, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010639)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38170
fragaria_vesca FvH4_2g17132 FvH4_2g17132 FvH4_2g17132
malus_domestica MD05G1144700.v1.1 MD10G1144200.v1.1
prunus_persica Prupe.8G182800_v2.0.a1
pyrus_communis pycom05g13980 pycom10g12410
rosa_chinensis RchiOBHm_Chr6g0281571
rosa_laevigata RLG00000012962
rosa_multiflora Rmu_ssc0000211.1_g000016
rosa_roxburghii Rroxscaffold_7G00186990
rosa_rugosa Rorug06G0141700 Rorug06G0141800
rosa_samantha Rh6AG254200 Rh6BG257200 Rh6CG256500 Rh6DG248300
rosa_wichuraiana Rw6G022070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 690
AasI GACNNNNNNGTC 1 cut(s) 150
Acc36I ACCTGC 1 cut(s) 2191
AccB1I GGYRCC 2 cut(s) 3590, 4495
AccB7I CCANNNNNTGG 2 cut(s) 104, 4682
AccBSI CCGCTC 2 cut(s) 205, 5705
AccI GTMKAC 2 cut(s) 3519, 4526
AccII CGCG 2 cut(s) 1267, 2982
AccIII TCCGGA 1 cut(s) 2945
AciI CCGC 8 cut(s) 205, 1232, 1341, 1739, 2049, 5703, 6719, 6761
AclI AACGTT 1 cut(s) 5817
AcoI YGGCCR 1 cut(s) 1660
AdeI CACNNNGTG 1 cut(s) 2045
AflIII ACRYGT 2 cut(s) 1502, 3601
AgeI ACCGGT 1 cut(s) 4351
AhlI ACTAGT 3 cut(s) 4235, 5408, 6440
AjiI CACGTC 1 cut(s) 1217
AloI GAACNNNNNNTCC 8 cut(s) 4578, 4610, 4740, 4772, 4845, 4877, 5127, 5159
Alw21I GWGCWC 6 cut(s) 127, 790, 971, 1332, 2694, 5964
AlwNI CAGNNNCTG 5 cut(s) 2078, 3416, 4283, 4751, 6599
Aor13HI TCCGGA 1 cut(s) 2945
AoxI GGCC 6 cut(s) 158, 333, 348, 1660, 3083, 3130
ApaI GGGCCC 1 cut(s) 337
ArsI GACNNNNNNTTYG 8 cut(s) 1430, 1462, 4040, 4072, 4338, 4370, 4508, 4540
AseI ATTAAT 2 cut(s) 4578, 5253
AsiGI ACCGGT 1 cut(s) 4351
Asp700I GAANNNNTTC 1 cut(s) 3046
AspLEI GCGC 3 cut(s) 1267, 1310, 2982
AspS9I GGNCC 6 cut(s) 152, 333, 334, 1644, 3130, 3424
AsuC2I CCSGG 2 cut(s) 1729, 2273
AsuII TTCGAA 1 cut(s) 3752
AvaII GGWCC 3 cut(s) 152, 1644, 3424
AxyI CCTNAGG 1 cut(s) 4626
BaeGI GKGCMC 2 cut(s) 337, 4556
BaeI ACNNNNGTAYC 8 cut(s) 56, 89, 1819, 1852, 5562, 5595, 5937, 5970
BanI GGYRCC 2 cut(s) 3590, 4495
BanII GRGCYC 5 cut(s) 127, 337, 790, 2694, 5964
BarI GAAGNNNNNNTAC 2 cut(s) 6607, 6639
BauI CACGAG 2 cut(s) 903, 4981
BbsI GAAGAC 3 cut(s) 148, 2028, 4979
Bbv12I GWGCWC 6 cut(s) 127, 790, 971, 1332, 2694, 5964
BbvCI CCTCAGC 1 cut(s) 282
BceAI ACGGC 2 cut(s) 451, 3098
BcgI CGANNNNNNTGC 6 cut(s) 2082, 2116, 3343, 3377, 6268, 6302
BciVI GTATCC 3 cut(s) 84, 1433, 2254
BclI TGATCA 4 cut(s) 129, 2023, 3814, 4615
BcnI CCSGG 2 cut(s) 1729, 2273
BcuI ACTAGT 3 cut(s) 4235, 5408, 6440
BfmI CTRYAG 5 cut(s) 1565, 1779, 4077, 4689, 5130
BfuAI ACCTGC 1 cut(s) 2191
BfuI GTATCC 3 cut(s) 84, 1433, 2254
BglII AGATCT 4 cut(s) 2809, 2953, 3058, 5297
BlpI GCTNAGC 1 cut(s) 965
BmcAI AGTACT 2 cut(s) 1386, 3988
Bme18I GGWCC 3 cut(s) 152, 1644, 3424
BmgBI CACGTC 1 cut(s) 1217
BmgT120I GGNCC 6 cut(s) 152, 333, 334, 1644, 3130, 3424
BmrI ACTGGG 1 cut(s) 114
BmuI ACTGGG 1 cut(s) 114
BoxI GACNNNNGTC 2 cut(s) 2729, 3732
BpiI GAAGAC 3 cut(s) 148, 2028, 4979
BplI GAGNNNNNCTC 2 cut(s) 3995, 4027
BpmI CTGGAG 3 cut(s) 258, 1115, 1949
Bpu10I CCTNAGC 4 cut(s) 282, 720, 2688, 3420
Bpu1102I GCTNAGC 1 cut(s) 965
Bpu14I TTCGAA 1 cut(s) 3752
BpuEI CTTGAG 3 cut(s) 1280, 2678, 3916
BpuMI CCSGG 2 cut(s) 1729, 2273
Bsa29I ATCGAT 1 cut(s) 258
BsaAI YACGTR 2 cut(s) 3608, 3839
BsaBI GATNNNNATC 2 cut(s) 3063, 3372
BsaI GGTCTC 4 cut(s) 469, 1795, 2815, 5196
BsaWI WCCGGW 2 cut(s) 2945, 4351
BsaXI ACNNNNNCTCC 6 cut(s) 2691, 2721, 3162, 3192, 5152, 5182
Bse118I RCCGGY 3 cut(s) 1337, 3648, 4351
Bse21I CCTNAGG 1 cut(s) 4626
Bse3DI GCAATG 6 cut(s) 528, 1260, 4117, 4554, 4728, 4833
Bse8I GATNNNNATC 2 cut(s) 3063, 3372
BseAI TCCGGA 1 cut(s) 2945
BseCI ATCGAT 1 cut(s) 258
BseJI GATNNNNATC 2 cut(s) 3063, 3372
BseMI GCAATG 6 cut(s) 528, 1260, 4117, 4554, 4728, 4833
BseRI GAGGAG 5 cut(s) 525, 1125, 2295, 3788, 4767
BseSI GKGCMC 2 cut(s) 337, 4556
BseYI CCCAGC 1 cut(s) 3409
BsgI GTGCAG 2 cut(s) 606, 5937
Bsh1236I CGCG 2 cut(s) 1267, 2982
BshFI GGCC 6 cut(s) 160, 335, 350, 1662, 3085, 3132
BshNI GGYRCC 2 cut(s) 3590, 4495
BshTI ACCGGT 1 cut(s) 4351
BshVI ATCGAT 1 cut(s) 258
BsiHKAI GWGCWC 6 cut(s) 127, 790, 971, 1332, 2694, 5964
BsiSI CCGG 7 cut(s) 1338, 1729, 2272, 2946, 3116, 3649, 4352
BslFI GGGAC 8 cut(s) 231, 244, 436, 1657, 2179, 2414, 3884, 5290
BsmFI GGGAC 8 cut(s) 231, 244, 436, 1657, 2179, 2414, 3884, 5290
BsmI GAATGC 4 cut(s) 3046, 3154, 3366, 3647
BsnI GGCC 6 cut(s) 160, 335, 350, 1662, 3085, 3132
Bso31I GGTCTC 4 cut(s) 469, 1795, 2815, 5196
Bsp119I TTCGAA 1 cut(s) 3752
Bsp120I GGGCCC 1 cut(s) 333
Bsp1286I GDGCHC 8 cut(s) 127, 337, 790, 971, 1332, 2694, 4556, 5964
Bsp13I TCCGGA 1 cut(s) 2945
Bsp1407I TGTACA 2 cut(s) 5437, 6445
Bsp1720I GCTNAGC 1 cut(s) 965
Bsp19I CCATGG 1 cut(s) 1122
BspACI CCGC 8 cut(s) 205, 1232, 1341, 1739, 2049, 5703, 6719, 6761
BspANI GGCC 6 cut(s) 160, 335, 350, 1662, 3085, 3132
BspDI ATCGAT 1 cut(s) 258
BspEI TCCGGA 1 cut(s) 2945
BspFNI CGCG 2 cut(s) 1267, 2982
BspMAI CTGCAG 2 cut(s) 1569, 4081
BspMI ACCTGC 1 cut(s) 2191
BspQI GCTCTTC 1 cut(s) 3659
BspT104I TTCGAA 1 cut(s) 3752
BspT107I GGYRCC 2 cut(s) 3590, 4495
BspTNI GGTCTC 4 cut(s) 469, 1795, 2815, 5196
BsrBI CCGCTC 2 cut(s) 205, 5705
BsrDI GCAATG 6 cut(s) 528, 1260, 4117, 4554, 4728, 4833
BsrFI RCCGGY 3 cut(s) 1337, 3648, 4351
BsrGI TGTACA 2 cut(s) 5437, 6445
BssAI RCCGGY 3 cut(s) 1337, 3648, 4351
BssSI CACGAG 2 cut(s) 903, 4981
BssT1I CCWWGG 7 cut(s) 155, 1122, 4254, 4560, 4722, 5109, 6570
Bst2BI CACGAG 2 cut(s) 903, 4981
Bst6I CTCTTC 7 cut(s) 362, 1898, 2283, 3555, 3622, 3659, 5013
BstAPI GCANNNNNTGC 1 cut(s) 905
BstAUI TGTACA 2 cut(s) 5437, 6445
BstBAI YACGTR 2 cut(s) 3608, 3839
BstBI TTCGAA 1 cut(s) 3752
BstDSI CCRYGG 1 cut(s) 1122
BstFNI CGCG 2 cut(s) 1267, 2982
BstHHI GCGC 3 cut(s) 1267, 1310, 2982
BstNSI RCATGY 3 cut(s) 1506, 2762, 3605
BstPAI GACNNNNGTC 2 cut(s) 2729, 3732
BstSFI CTRYAG 5 cut(s) 1565, 1779, 4077, 4689, 5130
BstSLI GKGCMC 2 cut(s) 337, 4556
BstUI CGCG 2 cut(s) 1267, 2982
BstV2I GAAGAC 3 cut(s) 148, 2028, 4979
BstXI CCANNNNNNTGG 1 cut(s) 4549
Bsu15I ATCGAT 1 cut(s) 258
Bsu36I CCTNAGG 1 cut(s) 4626
BsuI GTATCC 3 cut(s) 84, 1433, 2254
BsuRI GGCC 6 cut(s) 160, 335, 350, 1662, 3085, 3132
BsuTUI ATCGAT 1 cut(s) 258
BtgI CCRYGG 1 cut(s) 1122
BtgZI GCGATG 2 cut(s) 995, 2331
BtrI CACGTC 1 cut(s) 1217
BveI ACCTGC 1 cut(s) 2191
CaiI CAGNNNCTG 5 cut(s) 2078, 3416, 4283, 4751, 6599
CfoI GCGC 3 cut(s) 1267, 1310, 2982
Cfr10I RCCGGY 3 cut(s) 1337, 3648, 4351
Cfr13I GGNCC 6 cut(s) 152, 333, 334, 1644, 3130, 3424
ClaI ATCGAT 1 cut(s) 258
CspAI ACCGGT 1 cut(s) 4351
CspCI CAANNNNNGTGG 2 cut(s) 1968, 2003
DraI TTTAAA 3 cut(s) 5766, 6141, 6525
DraIII CACNNNGTG 1 cut(s) 2045
DrdI GACNNNNNNGTC 1 cut(s) 150
DseDI GACNNNNNNGTC 1 cut(s) 150
EaeI YGGCCR 1 cut(s) 1660
Eam1104I CTCTTC 7 cut(s) 362, 1898, 2283, 3555, 3622, 3659, 5013
EarI CTCTTC 7 cut(s) 362, 1898, 2283, 3555, 3622, 3659, 5013
EciI GGCGGA 1 cut(s) 1247
Ecl136II GAGCTC 4 cut(s) 125, 788, 2692, 5962
Eco130I CCWWGG 7 cut(s) 155, 1122, 4254, 4560, 4722, 5109, 6570
Eco24I GRGCYC 5 cut(s) 127, 337, 790, 2694, 5964
Eco31I GGTCTC 4 cut(s) 469, 1795, 2815, 5196
Eco47I GGWCC 3 cut(s) 152, 1644, 3424
Eco53kI GAGCTC 4 cut(s) 125, 788, 2692, 5962
Eco81I CCTNAGG 1 cut(s) 4626
EcoICRI GAGCTC 4 cut(s) 125, 788, 2692, 5962
EcoO109I RGGNCCY 2 cut(s) 1644, 3424
EcoRI GAATTC 3 cut(s) 5377, 5548, 6661
EcoT14I CCWWGG 7 cut(s) 155, 1122, 4254, 4560, 4722, 5109, 6570
EcoT38I GRGCYC 5 cut(s) 127, 337, 790, 2694, 5964
ErhI CCWWGG 7 cut(s) 155, 1122, 4254, 4560, 4722, 5109, 6570
FalI AAGNNNNNCTT 2 cut(s) 3034, 3066
FaqI GGGAC 8 cut(s) 231, 244, 436, 1657, 2179, 2414, 3884, 5290
FauI CCCGC 2 cut(s) 6712, 6754
FauNDI CATATG 1 cut(s) 2190
FbaI TGATCA 4 cut(s) 129, 2023, 3814, 4615
FblI GTMKAC 2 cut(s) 3519, 4526
FriOI GRGCYC 5 cut(s) 127, 337, 790, 2694, 5964
GlaI GCGC 3 cut(s) 1266, 1309, 2981
GsaI CCCAGC 1 cut(s) 3413
GsuI CTGGAG 3 cut(s) 258, 1115, 1949
HaeIII GGCC 6 cut(s) 160, 335, 350, 1662, 3085, 3132
HapII CCGG 7 cut(s) 1338, 1729, 2272, 2946, 3116, 3649, 4352
HhaI GCGC 3 cut(s) 1267, 1310, 2982
Hin6I GCGC 3 cut(s) 1265, 1308, 2980
HinP1I GCGC 3 cut(s) 1265, 1308, 2980
HincII GTYRAC 4 cut(s) 448, 3034, 4437, 4527
HindII GTYRAC 4 cut(s) 448, 3034, 4437, 4527
HindIII AAGCTT 8 cut(s) 578, 1128, 1281, 3018, 3154, 3256, 5657, 6032
HpaII CCGG 7 cut(s) 1338, 1729, 2272, 2946, 3116, 3649, 4352
Hpy99I CGWCG 2 cut(s) 520, 5957
HpyCH4IV ACGT 6 cut(s) 1216, 3607, 3838, 4695, 5817, 5952
HpySE526I ACGT 6 cut(s) 1216, 3607, 3838, 4695, 5817, 5952
HspAI GCGC 3 cut(s) 1265, 1308, 2980
KflI GGGWCCC 1 cut(s) 1644
Kpn2I TCCGGA 1 cut(s) 2945
KroI GCCGGC 1 cut(s) 1337
KroNI GCCGGC 1 cut(s) 1339
Ksp22I TGATCA 4 cut(s) 129, 2023, 3814, 4615
LguI GCTCTTC 1 cut(s) 3659
MaeII ACGT 6 cut(s) 1216, 3607, 3838, 4695, 5817, 5952
MbiI CCGCTC 2 cut(s) 205, 5705
MfeI CAATTG 1 cut(s) 1851
MhlI GDGCHC 8 cut(s) 127, 337, 790, 971, 1332, 2694, 4556, 5964
MmeI TCCRAC 6 cut(s) 1015, 1144, 3874, 3997, 4678, 5179
MroI TCCGGA 1 cut(s) 2945
MroNI GCCGGC 1 cut(s) 1337
MroXI GAANNNNTTC 1 cut(s) 3046
MslI CAYNNNNRTG 5 cut(s) 3606, 3675, 5766, 6141, 6678
MspA1I CMGCKG 1 cut(s) 1739
MspI CCGG 7 cut(s) 1338, 1729, 2272, 2946, 3116, 3649, 4352
MunI CAATTG 1 cut(s) 1851
Mva1269I GAATGC 4 cut(s) 3046, 3154, 3366, 3647
MvnI CGCG 2 cut(s) 1267, 2982
NaeI GCCGGC 1 cut(s) 1339
NciI CCSGG 2 cut(s) 1729, 2273
NcoI CCATGG 1 cut(s) 1122
NdeI CATATG 1 cut(s) 2190
NgoMIV GCCGGC 1 cut(s) 1337
NmuCI GTSAC 5 cut(s) 1483, 1600, 2103, 4138, 4354
NspI RCATGY 3 cut(s) 1506, 2762, 3605
NspV TTCGAA 1 cut(s) 3752
PaeI GCATGC 1 cut(s) 2762
PciI ACATGT 2 cut(s) 1502, 3601
PciSI GCTCTTC 1 cut(s) 3659
PctI GAATGC 4 cut(s) 3046, 3154, 3366, 3647
PdiI GCCGGC 1 cut(s) 1339
PdmI GAANNNNTTC 1 cut(s) 3046
PflMI CCANNNNNTGG 2 cut(s) 104, 4682
PfoI TCCNGGA 1 cut(s) 790
PinAI ACCGGT 1 cut(s) 4351
Ppu21I YACGTR 2 cut(s) 3608, 3839
PpuMI RGGWCCY 2 cut(s) 1644, 3424
PscI ACATGT 2 cut(s) 1502, 3601
PshAI GACNNNNGTC 2 cut(s) 2729, 3732
PshBI ATTAAT 2 cut(s) 4578, 5253
PsiI TTATAA 1 cut(s) 690
Psp124BI GAGCTC 4 cut(s) 127, 790, 2694, 5964
Psp1406I AACGTT 1 cut(s) 5817
Psp5II RGGWCCY 2 cut(s) 1644, 3424
PspFI CCCAGC 1 cut(s) 3409
PspOMI GGGCCC 1 cut(s) 333
PspPI GGNCC 6 cut(s) 152, 333, 334, 1644, 3130, 3424
PspPPI RGGWCCY 2 cut(s) 1644, 3424
PsrI GAACNNNNNNTAC 2 cut(s) 4231, 4263
PstI CTGCAG 2 cut(s) 1569, 4081
PstNI CAGNNNCTG 5 cut(s) 2078, 3416, 4283, 4751, 6599
RseI CAYNNNNRTG 5 cut(s) 3606, 3675, 5766, 6141, 6678
SacI GAGCTC 4 cut(s) 127, 790, 2694, 5964
SalI GTCGAC 1 cut(s) 4525
SapI GCTCTTC 1 cut(s) 3659
Sau96I GGNCC 6 cut(s) 152, 333, 334, 1644, 3130, 3424
ScaI AGTACT 2 cut(s) 1386, 3988
SduI GDGCHC 8 cut(s) 127, 337, 790, 971, 1332, 2694, 4556, 5964
SfcI CTRYAG 5 cut(s) 1565, 1779, 4077, 4689, 5130
SfuI TTCGAA 1 cut(s) 3752
SinI GGWCC 3 cut(s) 152, 1644, 3424
SmiI ATTTAAAT 2 cut(s) 5766, 6141
SmiMI CAYNNNNRTG 5 cut(s) 3606, 3675, 5766, 6141, 6678
SmlI CTYRAG 3 cut(s) 1295, 2693, 3931
SmoI CTYRAG 3 cut(s) 1295, 2693, 3931
SpeI ACTAGT 3 cut(s) 4235, 5408, 6440
SphI GCATGC 1 cut(s) 2762
SsiI CCGC 8 cut(s) 205, 1232, 1341, 1739, 2049, 5703, 6719, 6761
SstI GAGCTC 4 cut(s) 127, 790, 2694, 5964
StyI CCWWGG 7 cut(s) 155, 1122, 4254, 4560, 4722, 5109, 6570
SwaI ATTTAAAT 2 cut(s) 5766, 6141
TaiI ACGT 6 cut(s) 1219, 3610, 3841, 4698, 5820, 5955
TaqII GACCGA 1 cut(s) 794
TatI WGTACW 6 cut(s) 1384, 3986, 4238, 4742, 5437, 6445
TauI GCSGC 1 cut(s) 208
TseFI GTSAC 5 cut(s) 1483, 1600, 2103, 4138, 4354
Tsp45I GTSAC 5 cut(s) 1483, 1600, 2103, 4138, 4354
TspGWI ACGGA 4 cut(s) 195, 3505, 5787, 6162
Van91I CCANNNNNTGG 2 cut(s) 104, 4682
VpaK11BI GGWCC 3 cut(s) 152, 1644, 3424
VspI ATTAAT 2 cut(s) 4578, 5253
XbaI TCTAGA 2 cut(s) 1138, 3061
XceI RCATGY 3 cut(s) 1506, 2762, 3605
XcmI CCANNNNNNNNNTGG 2 cut(s) 3140, 5458
XmiI GTMKAC 2 cut(s) 3519, 4526
XmnI GAANNNNTTC 1 cut(s) 3046
ZrmI AGTACT 2 cut(s) 1386, 3988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.