No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g18250 FvH4_2g18301 |
| malus_domestica | MD05G1166900.v1.1 MD10G1156800.v1.1 |
| prunus_persica | Prupe.8G195200_v2.0.a1 Prupe.8G195400_v2.0.a1 |
| pyrus_communis | pycom10g13500 |
| rosa_chinensis | RchiOBHm_Chr6g0283621 RchiOBHm_Chr6g0283651 |
| rosa_laevigata | RLG00000012808 RLG00000012812 |
| rosa_multiflora | Rmu_sc0002906.1_g000012 Rmu_sc0005719.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00185340 |
| rosa_rugosa | Rorug06G0156200 |
| rosa_samantha | Rh6AG268000 Rh6AG268300 Rh6BG270500 Rh6BG270800 Rh6CG270300 Rh6CG270700 Rh6DG264000 Rh6DG264300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 80 |
| AccB1I | GGYRCC | 1 cut(s) | 80 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 94 |
| AciI | CCGC | 2 cut(s) | 84, 437 |
| AclWI | GGATC | 2 cut(s) | 100, 274 |
| AcuI | CTGAAG | 1 cut(s) | 381 |
| AfaI | GTAC | 1 cut(s) | 82 |
| AfeI | AGCGCT | 1 cut(s) | 220 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 94, 205 |
| AjnI | CCWGG | 1 cut(s) | 124 |
| AluBI | AGCT | 1 cut(s) | 42 |
| AluI | AGCT | 1 cut(s) | 42 |
| AlwI | GGATC | 2 cut(s) | 100, 274 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 269 |
| Aor51HI | AGCGCT | 1 cut(s) | 220 |
| AoxI | GGCC | 2 cut(s) | 127, 196 |
| Asp718I | GGTACC | 1 cut(s) | 80 |
| AspLEI | GCGC | 1 cut(s) | 221 |
| AspS9I | GGNCC | 2 cut(s) | 122, 196 |
| AvaII | GGWCC | 1 cut(s) | 122 |
| BanI | GGYRCC | 1 cut(s) | 80 |
| BccI | CCATC | 3 cut(s) | 143, 323, 370 |
| BciT130I | CCWGG | 1 cut(s) | 126 |
| BfaI | CTAG | 1 cut(s) | 350 |
| BfoI | RGCGCY | 1 cut(s) | 222 |
| BglII | AGATCT | 1 cut(s) | 298 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| Bme18I | GGWCC | 1 cut(s) | 122 |
| BmgT120I | GGNCC | 2 cut(s) | 122, 196 |
| BmiI | GGNNCC | 1 cut(s) | 82 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BmsI | GCATC | 1 cut(s) | 409 |
| BpmI | CTGGAG | 1 cut(s) | 294 |
| BsaJI | CCNNGG | 2 cut(s) | 109, 139 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 94, 205 |
| BseBI | CCWGG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 2 cut(s) | 109, 139 |
| BseGI | GGATG | 2 cut(s) | 135, 424 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 94, 205 |
| BseMII | CTCAG | 2 cut(s) | 174, 363 |
| BshFI | GGCC | 2 cut(s) | 129, 198 |
| BshNI | GGYRCC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 94, 205 |
| BsmI | GAATGC | 1 cut(s) | 448 |
| BsnI | GGCC | 2 cut(s) | 129, 198 |
| Bsp143I | GATC | 4 cut(s) | 69, 105, 266, 298 |
| Bsp19I | CCATGG | 2 cut(s) | 109, 139 |
| BspACI | CCGC | 2 cut(s) | 84, 437 |
| BspANI | GGCC | 2 cut(s) | 129, 198 |
| BspCNI | CTCAG | 2 cut(s) | 175, 364 |
| BspLI | GGNNCC | 1 cut(s) | 82 |
| BspPI | GGATC | 2 cut(s) | 100, 274 |
| BspT107I | GGYRCC | 1 cut(s) | 80 |
| BssECI | CCNNGG | 2 cut(s) | 109, 139 |
| BssMI | GATC | 4 cut(s) | 69, 105, 266, 298 |
| BssT1I | CCWWGG | 2 cut(s) | 109, 139 |
| Bst2UI | CCWGG | 1 cut(s) | 126 |
| BstDEI | CTNAG | 2 cut(s) | 183, 372 |
| BstDSI | CCRYGG | 2 cut(s) | 109, 139 |
| BstF5I | GGATG | 2 cut(s) | 135, 424 |
| BstH2I | RGCGCY | 1 cut(s) | 222 |
| BstHHI | GCGC | 1 cut(s) | 221 |
| BstKTI | GATC | 4 cut(s) | 72, 108, 269, 301 |
| BstMBI | GATC | 4 cut(s) | 69, 105, 266, 298 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 218, 443 |
| BstNI | CCWGG | 1 cut(s) | 126 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstX2I | RGATCY | 2 cut(s) | 266, 298 |
| BstYI | RGATCY | 2 cut(s) | 266, 298 |
| BsuRI | GGCC | 2 cut(s) | 129, 198 |
| BtgI | CCRYGG | 2 cut(s) | 109, 139 |
| BtsCI | GGATG | 2 cut(s) | 135, 424 |
| CaiI | CAGNNNCTG | 1 cut(s) | 269 |
| CfoI | GCGC | 1 cut(s) | 221 |
| Cfr13I | GGNCC | 2 cut(s) | 122, 196 |
| Csp6I | GTAC | 1 cut(s) | 81 |
| CviAII | CATG | 4 cut(s) | 110, 140, 177, 304 |
| CviJI | RGCY | 5 cut(s) | 42, 129, 134, 198, 395 |
| CviKI_1 | RGCY | 5 cut(s) | 42, 129, 134, 198, 395 |
| CviQI | GTAC | 1 cut(s) | 81 |
| DdeI | CTNAG | 2 cut(s) | 183, 372 |
| DpnI | GATC | 4 cut(s) | 71, 107, 268, 300 |
| DpnII | GATC | 4 cut(s) | 69, 105, 266, 298 |
| Eco130I | CCWWGG | 2 cut(s) | 109, 139 |
| Eco47I | GGWCC | 1 cut(s) | 122 |
| Eco47III | AGCGCT | 1 cut(s) | 220 |
| Eco57I | CTGAAG | 1 cut(s) | 381 |
| EcoRII | CCWGG | 1 cut(s) | 124 |
| EcoT14I | CCWWGG | 2 cut(s) | 109, 139 |
| ErhI | CCWWGG | 2 cut(s) | 109, 139 |
| FaeI | CATG | 4 cut(s) | 113, 143, 180, 307 |
| FaiI | YATR | 8 cut(s) | 47, 90, 111, 141, 178, 305, 389, 432 |
| FatI | CATG | 4 cut(s) | 109, 139, 176, 303 |
| FokI | GGATG | 2 cut(s) | 122, 431 |
| FspBI | CTAG | 1 cut(s) | 350 |
| GlaI | GCGC | 1 cut(s) | 220 |
| GsuI | CTGGAG | 1 cut(s) | 294 |
| HaeII | RGCGCY | 1 cut(s) | 222 |
| HaeIII | GGCC | 2 cut(s) | 129, 198 |
| HhaI | GCGC | 1 cut(s) | 221 |
| Hin1II | CATG | 4 cut(s) | 113, 143, 180, 307 |
| Hin6I | GCGC | 1 cut(s) | 219 |
| HinP1I | GCGC | 1 cut(s) | 219 |
| HindIII | AAGCTT | 1 cut(s) | 40 |
| HinfI | GANTC | 1 cut(s) | 114 |
| Hpy188I | TCNGA | 4 cut(s) | 119, 184, 361, 373 |
| Hpy188III | TCNNGA | 1 cut(s) | 350 |
| HpyAV | CCTTC | 2 cut(s) | 23, 356 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 414 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 218, 443 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 372 |
| Hsp92II | CATG | 4 cut(s) | 113, 143, 180, 307 |
| HspAI | GCGC | 1 cut(s) | 219 |
| KpnI | GGTACC | 1 cut(s) | 84 |
| Kzo9I | GATC | 4 cut(s) | 69, 105, 266, 298 |
| LpnPI | CCDG | 6 cut(s) | 63, 80, 111, 138, 249, 258 |
| LweI | GCATC | 1 cut(s) | 409 |
| MaeI | CTAG | 1 cut(s) | 350 |
| MaeIII | GTNAC | 3 cut(s) | 157, 259, 277 |
| MalI | GATC | 4 cut(s) | 71, 107, 268, 300 |
| MboI | GATC | 4 cut(s) | 69, 105, 266, 298 |
| MboII | GAAGA | 2 cut(s) | 19, 64 |
| MfeI | CAATTG | 1 cut(s) | 409 |
| MflI | RGATCY | 2 cut(s) | 266, 298 |
| MluCI | AATT | 3 cut(s) | 225, 255, 409 |
| MnlI | CCTC | 3 cut(s) | 113, 157, 346 |
| MseI | TTAA | 2 cut(s) | 38, 171 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MunI | CAATTG | 1 cut(s) | 409 |
| Mva1269I | GAATGC | 1 cut(s) | 448 |
| MvaI | CCWGG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 218, 443 |
| NcoI | CCATGG | 2 cut(s) | 109, 139 |
| NdeII | GATC | 4 cut(s) | 69, 105, 266, 298 |
| NlaIII | CATG | 4 cut(s) | 113, 143, 180, 307 |
| NlaIV | GGNNCC | 1 cut(s) | 82 |
| NmuCI | GTSAC | 2 cut(s) | 157, 259 |
| PctI | GAATGC | 1 cut(s) | 448 |
| PfeI | GAWTC | 1 cut(s) | 114 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 94 |
| Psp6I | CCWGG | 1 cut(s) | 124 |
| PspGI | CCWGG | 1 cut(s) | 124 |
| PspN4I | GGNNCC | 1 cut(s) | 82 |
| PspPI | GGNCC | 2 cut(s) | 122, 196 |
| PstNI | CAGNNNCTG | 1 cut(s) | 269 |
| PsuI | RGATCY | 2 cut(s) | 266, 298 |
| RsaI | GTAC | 1 cut(s) | 82 |
| RsaNI | GTAC | 1 cut(s) | 81 |
| SaqAI | TTAA | 2 cut(s) | 38, 171 |
| Sau3AI | GATC | 4 cut(s) | 69, 105, 266, 298 |
| Sau96I | GGNCC | 2 cut(s) | 122, 196 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SetI | ASST | 3 cut(s) | 44, 168, 357 |
| SfaNI | GCATC | 1 cut(s) | 409 |
| SinI | GGWCC | 1 cut(s) | 122 |
| Sse9I | AATT | 3 cut(s) | 225, 255, 409 |
| SsiI | CCGC | 2 cut(s) | 84, 437 |
| SspMI | CTAG | 1 cut(s) | 350 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| StyI | CCWWGG | 2 cut(s) | 109, 139 |
| TaqI | TCGA | 1 cut(s) | 50 |
| TasI | AATT | 3 cut(s) | 225, 255, 409 |
| TfiI | GAWTC | 1 cut(s) | 114 |
| Tru1I | TTAA | 2 cut(s) | 38, 171 |
| Tru9I | TTAA | 2 cut(s) | 38, 171 |
| TseFI | GTSAC | 2 cut(s) | 157, 259 |
| Tsp45I | GTSAC | 2 cut(s) | 157, 259 |
| TspDTI | ATGAA | 1 cut(s) | 34 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 94 |
| VpaK11BI | GGWCC | 1 cut(s) | 122 |
| XbaI | TCTAGA | 1 cut(s) | 349 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 137 |
| XspI | CTAG | 1 cut(s) | 350 |