Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0011491

Physical Location & Seq

Genomic Coordinates Reverse (-)

18947027 .. 18950422

Gene Structure 3396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G199800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 750 bp

ATGACACAACGTTCACATGTACCAAAGTTTGGGAATTGGGAAGGTGAAGAAAATGTTCCTTACACAGCCTATTTCGATAAGGCCCGTAAGGGTCGAACAGGGCCAGGGGGAAAGATGATTAATCCAAATGACCCCCAACAGAACCAGGATATGCTTTCTGATATATCTTCATCCGCATCATCTCCTCCAAAAGTTAGAGCTGAACCAGAAAGACCAGTTCATGAACGGAGAAGAAGCAGGGAGGATAACGACCTAAGGCAATTTGCCAACTCTCCAGCCCATCGTGAAAATTTGGGTCGCAGAACTTCTGGTGAGGCAGCAAATCAACCTAACAGAGGCCGTGGAGTAAGTTCTGGTGAAACCCATCGAAAACCTGCACGACCAAGTTCTGGCTCTGAGTACAGTGTTGAACGTTCACCTCTCCATCGCAATGCAAGGGTCTCAGGGAGAGATTCTCCCTCCTGGGAAGGAAAGCCTTCATATGAAAGTAGCCATGGTACTCCTGGAAGATCCCGTCTTAAACCTCGTGATGAAAGCCCTGAGAAAGGTGCTGCTGTTCCGAAATTTGGCGAGTGGGATGAGAATGATCCTGCATCAGCTGACGGTTTCACTCACATTTTCAATAAAGTGCGGGAGGAGAAGGCAGGGAAAGTACCAGGCACTCCTTCTCAGTCATCGTACCACGATGCACGGAAGCAGGCTGCCAATGACACTGCTAAGAGTTGCTGCTTTCCATGGAGCAGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002237 GO:0002253 GO:0002376 GO:0002682 GO:0002683 GO:0002684 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009617 GO:0009626 GO:0009814 GO:0009816 GO:0009987 GO:0010033 GO:0010204 GO:0010363 GO:0010941 GO:0012501 GO:0016020 GO:0016310 GO:0019538 GO:0019897 GO:0019898 GO:0023052 GO:0031347 GO:0031348 GO:0031349 GO:0033554 GO:0034050 GO:0034051 GO:0036211 GO:0042221 GO:0042742 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0045824 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050776 GO:0050777 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0080135 GO:0098542 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

AvrRpt-cleavage

Protein Analysis

250

Amino Acids

27.66

Weight (kDa)

9.72

Isoelectric Point (pI)

63.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25070 AT3G25070
fragaria_vesca	FvH4_2g18650 FvH4_2g18650 FvH4_2g18650
malus_domestica	MD05G1172400.v1.1 MD10G1160600.v1.1
prunus_persica	Prupe.8G199800_v2.0.a1
pyrus_communis	pycom05g15900 pycom10g13880
rosa_chinensis	RchiOBHm_Chr6g0284211
rosa_laevigata	RLG00000012756
rosa_multiflora	Rmu_sc0002698.1_g000030
rosa_roxburghii	Rroxscaffold_7G00184780
rosa_rugosa	Rorug06G0161900
rosa_samantha	Rh6AG274800 Rh6BG275300 Rh6CG277000 Rh6DG269700
rosa_wichuraiana	Rw6G023640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	382
AccB7I	CCANNNNNTGG	2 cut(s)	29, 389
AciI	CCGC	2 cut(s)	174, 631
AclI	AACGTT	2 cut(s)	10, 412
AclWI	GGATC	2 cut(s)	504, 581
AcsI	RAATTY	2 cut(s)	289, 563
AfaI	GTAC	5 cut(s)	21, 401, 499, 654, 680
AfiI	CCNNNNNNNGG	5 cut(s)	29, 335, 389, 545, 566
AflIII	ACRYGT	1 cut(s)	16
AgsI	TTSAA	2 cut(s)	410, 622
AjnI	CCWGG	5 cut(s)	103, 144, 461, 502, 655
AluBI	AGCT	2 cut(s)	200, 599
AluI	AGCT	2 cut(s)	200, 599
Alw26I	GTCTC	1 cut(s)	445
AlwI	GGATC	2 cut(s)	504, 581
AoxI	GGCC	3 cut(s)	81, 101, 337
ApeKI	GCWGC	4 cut(s)	317, 551, 701, 726
ApoI	RAATTY	2 cut(s)	289, 563
AseI	ATTAAT	1 cut(s)	120
Asp700I	GAANNNNTTC	2 cut(s)	54, 475
AspS9I	GGNCC	2 cut(s)	82, 101
AsuHPI	GGTGA	4 cut(s)	56, 323, 368, 408
AxyI	CCTNAGG	1 cut(s)	254
BauI	CACGAG	1 cut(s)	525
BbvI	GCAGC	4 cut(s)	329, 538, 688, 713
BccI	CCATC	3 cut(s)	288, 372, 432
BceAI	ACGGC	1 cut(s)	324
BciT130I	CCWGG	5 cut(s)	105, 146, 463, 504, 657
BcoDI	GTCTC	1 cut(s)	445
BfuAI	ACCTGC	1 cut(s)	382
BisI	GCNGC	4 cut(s)	318, 552, 702, 727
BlsI	GCNGC	4 cut(s)	319, 553, 703, 728
Bme1390I	CCNGG	5 cut(s)	105, 146, 463, 504, 657
BmgT120I	GGNCC	2 cut(s)	82, 101
BmrFI	CCNGG	5 cut(s)	105, 146, 463, 504, 657
BmsI	GCATC	3 cut(s)	185, 602, 676
BplI	GAGNNNNNCTC	2 cut(s)	439, 471
BpmI	CTGGAG	1 cut(s)	258
BsaI	GGTCTC	1 cut(s)	445
BsaJI	CCNNGG	5 cut(s)	104, 340, 462, 493, 734
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 335, 389, 545, 566
Bse1I	ACTGG	1 cut(s)	215
Bse21I	CCTNAGG	1 cut(s)	254
Bse3DI	GCAATG	1 cut(s)	436
BseBI	CCWGG	5 cut(s)	105, 146, 463, 504, 657
BseDI	CCNNGG	5 cut(s)	104, 340, 462, 493, 734
BseGI	GGATG	2 cut(s)	170, 583
BseLI	CCNNNNNNNGG	5 cut(s)	29, 335, 389, 545, 566
BseMI	GCAATG	1 cut(s)	436
BseMII	CTCAG	4 cut(s)	387, 456, 531, 683
BseNI	ACTGG	1 cut(s)	215
BseRI	GAGGAG	2 cut(s)	174, 650
BseXI	GCAGC	4 cut(s)	329, 538, 688, 713
BsgI	GTGCAG	1 cut(s)	360
BshFI	GGCC	3 cut(s)	83, 103, 339
BslI	CCNNNNNNNGG	5 cut(s)	29, 335, 389, 545, 566
BsmAI	GTCTC	1 cut(s)	445
BsnI	GGCC	3 cut(s)	83, 103, 339
Bso31I	GGTCTC	1 cut(s)	445
Bsp143I	GATC	2 cut(s)	509, 586
Bsp19I	CCATGG	2 cut(s)	493, 734
BspACI	CCGC	2 cut(s)	174, 631
BspANI	GGCC	3 cut(s)	83, 103, 339
BspCNI	CTCAG	4 cut(s)	388, 455, 532, 682
BspHI	TCATGA	1 cut(s)	220
BspMI	ACCTGC	1 cut(s)	382
BspPI	GGATC	2 cut(s)	504, 581
BspTNI	GGTCTC	1 cut(s)	445
BsrDI	GCAATG	1 cut(s)	436
BsrI	ACTGG	1 cut(s)	215
BssECI	CCNNGG	5 cut(s)	104, 340, 462, 493, 734
BssMI	GATC	2 cut(s)	509, 586
BssSI	CACGAG	1 cut(s)	525
BssT1I	CCWWGG	2 cut(s)	493, 734
Bst2BI	CACGAG	1 cut(s)	525
Bst2UI	CCWGG	5 cut(s)	105, 146, 463, 504, 657
Bst4CI	ACNGT	2 cut(s)	404, 605
BstC8I	GCNNGC	1 cut(s)	699
BstDEI	CTNAG	6 cut(s)	254, 396, 442, 540, 669, 717
BstDSI	CCRYGG	3 cut(s)	340, 493, 734
BstENI	CCTNNNNNAGG	2 cut(s)	333, 543
BstF5I	GGATG	2 cut(s)	170, 583
BstKTI	GATC	2 cut(s)	512, 589
BstMAI	GTCTC	1 cut(s)	445
BstMBI	GATC	2 cut(s)	509, 586
BstNI	CCWGG	5 cut(s)	105, 146, 463, 504, 657
BstNSI	RCATGY	1 cut(s)	20
BstSCI	CCNGG	5 cut(s)	103, 144, 461, 502, 655
BstV1I	GCAGC	4 cut(s)	329, 538, 688, 713
BstX2I	RGATCY	1 cut(s)	509
BstYI	RGATCY	1 cut(s)	509
Bsu36I	CCTNAGG	1 cut(s)	254
BsuRI	GGCC	3 cut(s)	83, 103, 339
BtgI	CCRYGG	3 cut(s)	340, 493, 734
BtgZI	GCGATG	1 cut(s)	410
BtsCI	GGATG	2 cut(s)	170, 583
BtsI	GCAGTG	1 cut(s)	711
BtsIMutI	CAGTG	2 cut(s)	409, 711
BveI	ACCTGC	1 cut(s)	382
Cac8I	GCNNGC	1 cut(s)	699
CciI	TCATGA	1 cut(s)	220
Cfr13I	GGNCC	2 cut(s)	82, 101
Csp6I	GTAC	5 cut(s)	20, 400, 498, 653, 679
CviAII	CATG	4 cut(s)	17, 221, 494, 735
CviQI	GTAC	5 cut(s)	20, 400, 498, 653, 679
DdeI	CTNAG	6 cut(s)	254, 396, 442, 540, 669, 717
DpnI	GATC	2 cut(s)	511, 588
DpnII	GATC	2 cut(s)	509, 586
Eco130I	CCWWGG	2 cut(s)	493, 734
Eco31I	GGTCTC	1 cut(s)	445
Eco81I	CCTNAGG	1 cut(s)	254
EcoNI	CCTNNNNNAGG	2 cut(s)	333, 543
EcoRII	CCWGG	5 cut(s)	103, 144, 461, 502, 655
EcoT14I	CCWWGG	2 cut(s)	493, 734
ErhI	CCWWGG	2 cut(s)	493, 734
FaeI	CATG	4 cut(s)	20, 224, 497, 738
FaiI	YATR	8 cut(s)	18, 152, 164, 222, 481, 483, 495, 736
FatI	CATG	4 cut(s)	16, 220, 493, 734
FauI	CCCGC	1 cut(s)	624
FauNDI	CATATG	1 cut(s)	481
Fnu4HI	GCNGC	4 cut(s)	318, 552, 702, 727
FokI	GGATG	2 cut(s)	157, 590
Fsp4HI	GCNGC	4 cut(s)	318, 552, 702, 727
GluI	GCNGC	4 cut(s)	318, 552, 702, 727
GsuI	CTGGAG	1 cut(s)	258
HaeIII	GGCC	3 cut(s)	83, 103, 339
Hin1II	CATG	4 cut(s)	20, 224, 497, 738
HinfI	GANTC	1 cut(s)	452
HphI	GGTGA	4 cut(s)	56, 323, 368, 408
Hpy166II	GTNNAC	2 cut(s)	14, 416
Hpy188I	TCNGA	3 cut(s)	160, 397, 561
Hpy188III	TCNNGA	3 cut(s)	221, 284, 527
Hpy8I	GTNNAC	2 cut(s)	14, 416
HpyAV	CCTTC	5 cut(s)	35, 461, 486, 634, 675
HpyCH4III	ACNGT	2 cut(s)	404, 605
HpyCH4IV	ACGT	2 cut(s)	10, 412
HpyCH4V	TGCA	4 cut(s)	377, 434, 593, 689
HpyF3I	CTNAG	6 cut(s)	254, 396, 442, 540, 669, 717
HpySE526I	ACGT	2 cut(s)	10, 412
Hsp92II	CATG	4 cut(s)	20, 224, 497, 738
Kzo9I	GATC	2 cut(s)	509, 586
LmnI	GCTCC	1 cut(s)	738
Lsp1109I	GCAGC	4 cut(s)	329, 538, 688, 713
LweI	GCATC	3 cut(s)	185, 602, 676
MaeII	ACGT	2 cut(s)	10, 412
MalI	GATC	2 cut(s)	511, 588
MboI	GATC	2 cut(s)	509, 586
MboII	GAAGA	4 cut(s)	59, 159, 243, 519
MflI	RGATCY	1 cut(s)	509
MluCI	AATT	4 cut(s)	34, 260, 289, 563
MnlI	CCTC	8 cut(s)	195, 235, 307, 329, 429, 469, 534, 628
MroXI	GAANNNNTTC	2 cut(s)	54, 475
MseI	TTAA	2 cut(s)	120, 519
MslI	CAYNNNNRTG	1 cut(s)	429
MspA1I	CMGCKG	1 cut(s)	599
MspR9I	CCNGG	5 cut(s)	105, 146, 463, 504, 657
MvaI	CCWGG	5 cut(s)	105, 146, 463, 504, 657
NcoI	CCATGG	2 cut(s)	493, 734
NdeI	CATATG	1 cut(s)	481
NdeII	GATC	2 cut(s)	509, 586
NlaIII	CATG	4 cut(s)	20, 224, 497, 738
NspI	RCATGY	1 cut(s)	20
PagI	TCATGA	1 cut(s)	220
PciI	ACATGT	1 cut(s)	16
PdmI	GAANNNNTTC	2 cut(s)	54, 475
PfeI	GAWTC	1 cut(s)	452
PflMI	CCANNNNNTGG	2 cut(s)	29, 389
PfoI	TCCNGGA	1 cut(s)	502
PkrI	GCNGC	4 cut(s)	319, 553, 703, 728
PscI	ACATGT	1 cut(s)	16
PshBI	ATTAAT	1 cut(s)	120
Psp1406I	AACGTT	2 cut(s)	10, 412
Psp6I	CCWGG	5 cut(s)	103, 144, 461, 502, 655
PspGI	CCWGG	5 cut(s)	103, 144, 461, 502, 655
PspPI	GGNCC	2 cut(s)	82, 101
PsuI	RGATCY	1 cut(s)	509
PvuII	CAGCTG	1 cut(s)	599
RsaI	GTAC	5 cut(s)	21, 401, 499, 654, 680
RsaNI	GTAC	5 cut(s)	20, 400, 498, 653, 679
RseI	CAYNNNNRTG	1 cut(s)	429
SaqAI	TTAA	2 cut(s)	120, 519
SatI	GCNGC	4 cut(s)	318, 552, 702, 727
Sau3AI	GATC	2 cut(s)	509, 586
Sau96I	GGNCC	2 cut(s)	82, 101
ScrFI	CCNGG	5 cut(s)	105, 146, 463, 504, 657
SfaNI	GCATC	3 cut(s)	185, 602, 676
SmiMI	CAYNNNNRTG	1 cut(s)	429
Sse9I	AATT	4 cut(s)	34, 260, 289, 563
SsiI	CCGC	2 cut(s)	174, 631
StyD4I	CCNGG	5 cut(s)	103, 144, 461, 502, 655
StyI	CCWWGG	2 cut(s)	493, 734
TaaI	ACNGT	2 cut(s)	404, 605
TaiI	ACGT	2 cut(s)	13, 415
TaqI	TCGA	3 cut(s)	75, 94, 367
TasI	AATT	4 cut(s)	34, 260, 289, 563
TatI	WGTACW	1 cut(s)	399
TfiI	GAWTC	1 cut(s)	452
Tru1I	TTAA	2 cut(s)	120, 519
Tru9I	TTAA	2 cut(s)	120, 519
TscAI	CASTG	2 cut(s)	409, 718
TseI	GCWGC	4 cut(s)	317, 551, 701, 726
TspDTI	ATGAA	6 cut(s)	159, 209, 237, 468, 498, 546
TspGWI	ACGGA	2 cut(s)	241, 706
TspRI	CASTG	2 cut(s)	409, 718
Van91I	CCANNNNNTGG	2 cut(s)	29, 389
VspI	ATTAAT	1 cut(s)	120
XagI	CCTNNNNNAGG	2 cut(s)	333, 543
XapI	RAATTY	2 cut(s)	289, 563
XceI	RCATGY	1 cut(s)	20
XcmI	CCANNNNNNNNNTGG	1 cut(s)	500
XmnI	GAANNNNTTC	2 cut(s)	54, 475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.