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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07060 |
| fragaria_vesca | FvH4_2g19201 FvH4_2g19201 FvH4_2g19201 FvH4_2g19201 FvH4_2g19201 FvH4_2g19201 FvH4_2g19201 |
| malus_domestica | MD05G1176900.v1.1 MD05G1177000.v1.1 MD10G1165500.v1.1 |
| prunus_persica | Prupe.8G204000_v2.0.a1 Prupe.8G204000_v2.0.a1 Prupe.8G204000_v2.0.a1 Prupe.8G204000_v2.0.a1 |
| pyrus_communis | pycom10g14280 |
| rosa_chinensis | RchiOBHm_Chr6g0284991 |
| rosa_laevigata | RLG00000012692 |
| rosa_multiflora | Rmu_sc0006185.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00183860 Rroxscaffold_7G00184140 |
| rosa_rugosa | Rorug06G0169500 |
| rosa_samantha | Rh5DG284300 Rh6AG281300 Rh6BG282000 Rh6CG283700 Rh6DG276800 Rh7DG366800 |
| rosa_wichuraiana | Rw6G024180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1235 |
| AccB1I | GGYRCC | 2 cut(s) | 168, 1749 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 451, 1433 |
| AccI | GTMKAC | 1 cut(s) | 82 |
| AccII | CGCG | 1 cut(s) | 49 |
| AciI | CCGC | 7 cut(s) | 47, 832, 1051, 1334, 1767, 1895, 2000 |
| AclWI | GGATC | 4 cut(s) | 1124, 1758, 1771, 1810 |
| AcsI | RAATTY | 7 cut(s) | 51, 114, 781, 934, 1166, 1267, 1552 |
| AcuI | CTGAAG | 4 cut(s) | 539, 1182, 1260, 1791 |
| AcyI | GRCGYC | 1 cut(s) | 19 |
| AfaI | GTAC | 3 cut(s) | 148, 1797, 1909 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 451, 634, 1433 |
| AhlI | ACTAGT | 1 cut(s) | 1967 |
| AjnI | CCWGG | 4 cut(s) | 799, 916, 1666, 1752 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1561, 1593 |
| AleI | CACNNNNGTG | 1 cut(s) | 60 |
| AluBI | AGCT | 9 cut(s) | 89, 265, 392, 442, 665, 1037, 1245, 1539, 1717 |
| AluI | AGCT | 9 cut(s) | 89, 265, 392, 442, 665, 1037, 1245, 1539, 1717 |
| Alw21I | GWGCWC | 1 cut(s) | 1333 |
| Alw26I | GTCTC | 3 cut(s) | 1229, 1275, 2247 |
| Alw44I | GTGCAC | 1 cut(s) | 1329 |
| AlwI | GGATC | 4 cut(s) | 1124, 1758, 1771, 1810 |
| Ama87I | CYCGRG | 1 cut(s) | 1973 |
| ApaLI | GTGCAC | 1 cut(s) | 1329 |
| ApeKI | GCWGC | 3 cut(s) | 392, 965, 2063 |
| ApoI | RAATTY | 7 cut(s) | 51, 114, 781, 934, 1166, 1267, 1552 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2116 |
| AspS9I | GGNCC | 3 cut(s) | 272, 297, 643 |
| AsuC2I | CCSGG | 3 cut(s) | 1310, 1974, 1975 |
| AsuHPI | GGTGA | 3 cut(s) | 74, 1404, 1863 |
| AsuII | TTCGAA | 1 cut(s) | 551 |
| AvaI | CYCGRG | 1 cut(s) | 1973 |
| AvaII | GGWCC | 3 cut(s) | 272, 297, 643 |
| BaeGI | GKGCMC | 1 cut(s) | 1333 |
| BamHI | GGATCC | 1 cut(s) | 1763 |
| BanI | GGYRCC | 2 cut(s) | 168, 1749 |
| BbsI | GAAGAC | 1 cut(s) | 1578 |
| Bbv12I | GWGCWC | 1 cut(s) | 1333 |
| BbvCI | CCTCAGC | 1 cut(s) | 438 |
| BbvI | GCAGC | 3 cut(s) | 379, 977, 2075 |
| BccI | CCATC | 6 cut(s) | 323, 565, 686, 872, 923, 1034 |
| BceAI | ACGGC | 1 cut(s) | 745 |
| BciT130I | CCWGG | 4 cut(s) | 801, 918, 1668, 1754 |
| BciVI | GTATCC | 2 cut(s) | 214, 1702 |
| BclI | TGATCA | 4 cut(s) | 64, 1203, 1639, 2212 |
| BcnI | CCSGG | 3 cut(s) | 1310, 1974, 1975 |
| BcoDI | GTCTC | 3 cut(s) | 1229, 1275, 2247 |
| BcuI | ACTAGT | 1 cut(s) | 1967 |
| BfaI | CTAG | 2 cut(s) | 1130, 1968 |
| BfmI | CTRYAG | 2 cut(s) | 813, 963 |
| BfuI | GTATCC | 2 cut(s) | 214, 1702 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 953 |
| BglII | AGATCT | 1 cut(s) | 2161 |
| BisI | GCNGC | 5 cut(s) | 47, 393, 966, 2001, 2064 |
| BlpI | GCTNAGC | 1 cut(s) | 481 |
| BlsI | GCNGC | 5 cut(s) | 48, 394, 967, 2002, 2065 |
| Bme1390I | CCNGG | 7 cut(s) | 801, 918, 1310, 1668, 1754, 1974, 1975 |
| Bme18I | GGWCC | 3 cut(s) | 272, 297, 643 |
| BmeT110I | CYCGRG | 1 cut(s) | 1973 |
| BmgT120I | GGNCC | 3 cut(s) | 272, 297, 643 |
| BmiI | GGNNCC | 7 cut(s) | 170, 759, 830, 910, 1307, 1751, 1765 |
| BmrFI | CCNGG | 7 cut(s) | 801, 918, 1310, 1668, 1754, 1974, 1975 |
| BmrI | ACTGGG | 1 cut(s) | 360 |
| BmsI | GCATC | 3 cut(s) | 1207, 1569, 2133 |
| BmuI | ACTGGG | 1 cut(s) | 360 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1221 |
| BpiI | GAAGAC | 1 cut(s) | 1578 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 421, 453 |
| BpmI | CTGGAG | 1 cut(s) | 1545 |
| Bpu10I | CCTNAGC | 1 cut(s) | 438 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 481 |
| Bpu14I | TTCGAA | 1 cut(s) | 551 |
| BpuMI | CCSGG | 3 cut(s) | 1310, 1974, 1975 |
| Bsa29I | ATCGAT | 1 cut(s) | 1950 |
| BsaAI | YACGTR | 1 cut(s) | 1471 |
| BsaBI | GATNNNNATC | 1 cut(s) | 69 |
| BsaHI | GRCGYC | 1 cut(s) | 19 |
| BsaJI | CCNNGG | 8 cut(s) | 300, 428, 799, 916, 1193, 1564, 1973, 2259 |
| BsaWI | WCCGGW | 1 cut(s) | 59 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 451, 634, 1433 |
| Bse1I | ACTGG | 4 cut(s) | 355, 381, 617, 1073 |
| Bse8I | GATNNNNATC | 1 cut(s) | 69 |
| BseBI | CCWGG | 4 cut(s) | 801, 918, 1668, 1754 |
| BseCI | ATCGAT | 1 cut(s) | 1950 |
| BseDI | CCNNGG | 8 cut(s) | 300, 428, 799, 916, 1193, 1564, 1973, 2259 |
| BseGI | GGATG | 5 cut(s) | 236, 934, 1560, 1798, 2124 |
| BseJI | GATNNNNATC | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 451, 634, 1433 |
| BseMII | CTCAG | 8 cut(s) | 14, 452, 495, 558, 735, 1138, 1704, 2103 |
| BseNI | ACTGG | 4 cut(s) | 355, 381, 617, 1073 |
| BseRI | GAGGAG | 1 cut(s) | 686 |
| BseSI | GKGCMC | 1 cut(s) | 1333 |
| BseXI | GCAGC | 3 cut(s) | 379, 977, 2075 |
| Bsh1236I | CGCG | 1 cut(s) | 49 |
| BshNI | GGYRCC | 2 cut(s) | 168, 1749 |
| BshVI | ATCGAT | 1 cut(s) | 1950 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1333 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1973 |
| BsiSI | CCGG | 3 cut(s) | 60, 1310, 1974 |
| BslFI | GGGAC | 2 cut(s) | 1956, 1990 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 451, 634, 1433 |
| BsmAI | GTCTC | 3 cut(s) | 1229, 1275, 2247 |
| BsmFI | GGGAC | 2 cut(s) | 1956, 1990 |
| BsmI | GAATGC | 1 cut(s) | 1897 |
| BsoBI | CYCGRG | 1 cut(s) | 1973 |
| Bsp119I | TTCGAA | 1 cut(s) | 551 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1333 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 481 |
| BspACI | CCGC | 7 cut(s) | 47, 832, 1051, 1334, 1767, 1895, 2000 |
| BspCNI | CTCAG | 8 cut(s) | 15, 451, 494, 559, 736, 1137, 1705, 2102 |
| BspDI | ATCGAT | 1 cut(s) | 1950 |
| BspFNI | CGCG | 1 cut(s) | 49 |
| BspLI | GGNNCC | 7 cut(s) | 170, 759, 830, 910, 1307, 1751, 1765 |
| BspMAI | CTGCAG | 2 cut(s) | 817, 967 |
| BspPI | GGATC | 4 cut(s) | 1124, 1758, 1771, 1810 |
| BspT104I | TTCGAA | 1 cut(s) | 551 |
| BspT107I | GGYRCC | 2 cut(s) | 168, 1749 |
| BsrI | ACTGG | 4 cut(s) | 355, 381, 617, 1073 |
| BssECI | CCNNGG | 8 cut(s) | 300, 428, 799, 916, 1193, 1564, 1973, 2259 |
| BssNI | GRCGYC | 1 cut(s) | 19 |
| BssT1I | CCWWGG | 4 cut(s) | 300, 1193, 1564, 2259 |
| Bst2UI | CCWGG | 4 cut(s) | 801, 918, 1668, 1754 |
| Bst4CI | ACNGT | 6 cut(s) | 470, 902, 1405, 1686, 1728, 2007 |
| Bst6I | CTCTTC | 4 cut(s) | 842, 1088, 1232, 2107 |
| BstACI | GRCGYC | 1 cut(s) | 19 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 962 |
| BstBAI | YACGTR | 1 cut(s) | 1471 |
| BstBI | TTCGAA | 1 cut(s) | 551 |
| BstC8I | GCNNGC | 2 cut(s) | 586, 958 |
| BstEII | GGTNACC | 1 cut(s) | 1410 |
| BstF5I | GGATG | 5 cut(s) | 236, 934, 1560, 1798, 2124 |
| BstFNI | CGCG | 1 cut(s) | 49 |
| BstMAI | GTCTC | 3 cut(s) | 1229, 1275, 2247 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 953, 962, 2072, 2231 |
| BstNI | CCWGG | 4 cut(s) | 801, 918, 1668, 1754 |
| BstNSI | RCATGY | 1 cut(s) | 588 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1221 |
| BstPI | GGTNACC | 1 cut(s) | 1410 |
| BstSCI | CCNGG | 7 cut(s) | 799, 916, 1308, 1666, 1752, 1972, 1973 |
| BstSFI | CTRYAG | 2 cut(s) | 813, 963 |
| BstSLI | GKGCMC | 1 cut(s) | 1333 |
| BstUI | CGCG | 1 cut(s) | 49 |
| BstV1I | GCAGC | 3 cut(s) | 379, 977, 2075 |
| BstV2I | GAAGAC | 1 cut(s) | 1578 |
| BstX2I | RGATCY | 3 cut(s) | 1763, 1802, 2161 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1380 |
| BstYI | RGATCY | 3 cut(s) | 1763, 1802, 2161 |
| Bsu15I | ATCGAT | 1 cut(s) | 1950 |
| BsuI | GTATCC | 2 cut(s) | 214, 1702 |
| BsuTUI | ATCGAT | 1 cut(s) | 1950 |
| BtsCI | GGATG | 5 cut(s) | 236, 934, 1560, 1798, 2124 |
| BtsIMutI | CAGTG | 4 cut(s) | 564, 624, 1080, 2003 |
| Cac8I | GCNNGC | 2 cut(s) | 586, 958 |
| Cfr13I | GGNCC | 3 cut(s) | 272, 297, 643 |
| Cfr9I | CCCGGG | 1 cut(s) | 1973 |
| ClaI | ATCGAT | 1 cut(s) | 1950 |
| CseI | GACGC | 1 cut(s) | 8 |
| CsiI | ACCWGGT | 1 cut(s) | 1666 |
| Csp6I | GTAC | 3 cut(s) | 147, 1796, 1908 |
| CviQI | GTAC | 3 cut(s) | 147, 1796, 1908 |
| DraI | TTTAAA | 2 cut(s) | 601, 2013 |
| Eam1104I | CTCTTC | 4 cut(s) | 842, 1088, 1232, 2107 |
| EarI | CTCTTC | 4 cut(s) | 842, 1088, 1232, 2107 |
| Eco130I | CCWWGG | 4 cut(s) | 300, 1193, 1564, 2259 |
| Eco32I | GATATC | 3 cut(s) | 14, 1699, 1869 |
| Eco47I | GGWCC | 3 cut(s) | 272, 297, 643 |
| Eco57I | CTGAAG | 4 cut(s) | 539, 1182, 1260, 1791 |
| Eco88I | CYCGRG | 1 cut(s) | 1973 |
| Eco91I | GGTNACC | 1 cut(s) | 1410 |
| EcoO109I | RGGNCCY | 1 cut(s) | 272 |
| EcoO65I | GGTNACC | 1 cut(s) | 1410 |
| EcoRI | GAATTC | 1 cut(s) | 51 |
| EcoRII | CCWGG | 4 cut(s) | 799, 916, 1666, 1752 |
| EcoRV | GATATC | 3 cut(s) | 14, 1699, 1869 |
| EcoT14I | CCWWGG | 4 cut(s) | 300, 1193, 1564, 2259 |
| EcoT22I | ATGCAT | 1 cut(s) | 2126 |
| ErhI | CCWWGG | 4 cut(s) | 300, 1193, 1564, 2259 |
| FaqI | GGGAC | 2 cut(s) | 1956, 1990 |
| FauI | CCCGC | 1 cut(s) | 1044 |
| FauNDI | CATATG | 1 cut(s) | 1429 |
| FbaI | TGATCA | 4 cut(s) | 64, 1203, 1639, 2212 |
| FblI | GTMKAC | 1 cut(s) | 82 |
| Fnu4HI | GCNGC | 5 cut(s) | 47, 393, 966, 2001, 2064 |
| FokI | GGATG | 5 cut(s) | 223, 941, 1547, 1805, 2111 |
| Fsp4HI | GCNGC | 5 cut(s) | 47, 393, 966, 2001, 2064 |
| FspBI | CTAG | 2 cut(s) | 1130, 1968 |
| GluI | GCNGC | 5 cut(s) | 47, 393, 966, 2001, 2064 |
| GsuI | CTGGAG | 1 cut(s) | 1545 |
| HapII | CCGG | 3 cut(s) | 60, 1310, 1974 |
| HgaI | GACGC | 1 cut(s) | 8 |
| Hin1I | GRCGYC | 1 cut(s) | 19 |
| HincII | GTYRAC | 1 cut(s) | 1452 |
| HindII | GTYRAC | 1 cut(s) | 1452 |
| HindIII | AAGCTT | 1 cut(s) | 1243 |
| HpaII | CCGG | 3 cut(s) | 60, 1310, 1974 |
| HphI | GGTGA | 3 cut(s) | 74, 1404, 1863 |
| Hpy166II | GTNNAC | 5 cut(s) | 83, 625, 1331, 1452, 1622 |
| Hpy188III | TCNNGA | 9 cut(s) | 36, 362, 896, 1030, 1278, 1524, 1597, 2051, 2216 |
| Hpy8I | GTNNAC | 5 cut(s) | 83, 625, 1331, 1452, 1622 |
| HpyAV | CCTTC | 6 cut(s) | 250, 263, 514, 628, 1730, 1807 |
| HpyCH4III | ACNGT | 6 cut(s) | 470, 902, 1405, 1686, 1728, 2007 |
| HpyCH4IV | ACGT | 3 cut(s) | 528, 1366, 1470 |
| HpyCH4V | TGCA | 8 cut(s) | 685, 815, 965, 1331, 1387, 1462, 2063, 2124 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 953, 962, 2072, 2231 |
| HpySE526I | ACGT | 3 cut(s) | 528, 1366, 1470 |
| Hsp92I | GRCGYC | 1 cut(s) | 19 |
| Ksp22I | TGATCA | 4 cut(s) | 64, 1203, 1639, 2212 |
| LmnI | GCTCC | 2 cut(s) | 447, 757 |
| Lsp1109I | GCAGC | 3 cut(s) | 379, 977, 2075 |
| LweI | GCATC | 3 cut(s) | 1207, 1569, 2133 |
| MabI | ACCWGGT | 1 cut(s) | 1666 |
| MaeI | CTAG | 2 cut(s) | 1130, 1968 |
| MaeII | ACGT | 3 cut(s) | 528, 1366, 1470 |
| MaeIII | GTNAC | 7 cut(s) | 529, 705, 1351, 1410, 1481, 1662, 1728 |
| MflI | RGATCY | 3 cut(s) | 1763, 1802, 2161 |
| MhlI | GDGCHC | 1 cut(s) | 1333 |
| MlyI | GAGTC | 2 cut(s) | 221, 2249 |
| MmeI | TCCRAC | 1 cut(s) | 1471 |
| Mph1103I | ATGCAT | 1 cut(s) | 2126 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2116 |
| MslI | CAYNNNNRTG | 4 cut(s) | 60, 126, 569, 2171 |
| MspI | CCGG | 3 cut(s) | 60, 1310, 1974 |
| MspR9I | CCNGG | 7 cut(s) | 801, 918, 1310, 1668, 1754, 1974, 1975 |
| Mva1269I | GAATGC | 1 cut(s) | 1897 |
| MvaI | CCWGG | 4 cut(s) | 801, 918, 1668, 1754 |
| MvnI | CGCG | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 953, 962, 2072, 2231 |
| NciI | CCSGG | 3 cut(s) | 1310, 1974, 1975 |
| NdeI | CATATG | 1 cut(s) | 1429 |
| NlaIV | GGNNCC | 7 cut(s) | 170, 759, 830, 910, 1307, 1751, 1765 |
| NmuCI | GTSAC | 4 cut(s) | 529, 705, 1410, 1481 |
| NsiI | ATGCAT | 1 cut(s) | 2126 |
| NspI | RCATGY | 1 cut(s) | 588 |
| NspV | TTCGAA | 1 cut(s) | 551 |
| OliI | CACNNNNGTG | 1 cut(s) | 60 |
| PaeI | GCATGC | 1 cut(s) | 588 |
| PctI | GAATGC | 1 cut(s) | 1897 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2116 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 451, 1433 |
| PfoI | TCCNGGA | 1 cut(s) | 1308 |
| PkrI | GCNGC | 5 cut(s) | 48, 394, 967, 2002, 2065 |
| PleI | GAGTC | 2 cut(s) | 220, 2249 |
| PpsI | GAGTC | 2 cut(s) | 220, 2249 |
| Ppu21I | YACGTR | 1 cut(s) | 1471 |
| PpuMI | RGGWCCY | 1 cut(s) | 272 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1221 |
| PsiI | TTATAA | 1 cut(s) | 1235 |
| Psp5II | RGGWCCY | 1 cut(s) | 272 |
| Psp6I | CCWGG | 4 cut(s) | 799, 916, 1666, 1752 |
| PspEI | GGTNACC | 1 cut(s) | 1410 |
| PspGI | CCWGG | 4 cut(s) | 799, 916, 1666, 1752 |
| PspN4I | GGNNCC | 7 cut(s) | 170, 759, 830, 910, 1307, 1751, 1765 |
| PspPI | GGNCC | 3 cut(s) | 272, 297, 643 |
| PspPPI | RGGWCCY | 1 cut(s) | 272 |
| PstI | CTGCAG | 2 cut(s) | 817, 967 |
| PsuI | RGATCY | 3 cut(s) | 1763, 1802, 2161 |
| RsaI | GTAC | 3 cut(s) | 148, 1797, 1909 |
| RsaNI | GTAC | 3 cut(s) | 147, 1796, 1908 |
| RseI | CAYNNNNRTG | 4 cut(s) | 60, 126, 569, 2171 |
| SatI | GCNGC | 5 cut(s) | 47, 393, 966, 2001, 2064 |
| Sau96I | GGNCC | 3 cut(s) | 272, 297, 643 |
| SchI | GAGTC | 2 cut(s) | 221, 2249 |
| ScrFI | CCNGG | 7 cut(s) | 801, 918, 1310, 1668, 1754, 1974, 1975 |
| SduI | GDGCHC | 1 cut(s) | 1333 |
| SexAI | ACCWGGT | 1 cut(s) | 1666 |
| SfaNI | GCATC | 3 cut(s) | 1207, 1569, 2133 |
| SfcI | CTRYAG | 2 cut(s) | 813, 963 |
| SfuI | TTCGAA | 1 cut(s) | 551 |
| SinI | GGWCC | 3 cut(s) | 272, 297, 643 |
| SmaI | CCCGGG | 1 cut(s) | 1975 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 60, 126, 569, 2171 |
| SpeI | ACTAGT | 1 cut(s) | 1967 |
| SphI | GCATGC | 1 cut(s) | 588 |
| SsiI | CCGC | 7 cut(s) | 47, 832, 1051, 1334, 1767, 1895, 2000 |
| SspMI | CTAG | 2 cut(s) | 1130, 1968 |
| StyD4I | CCNGG | 7 cut(s) | 799, 916, 1308, 1666, 1752, 1972, 1973 |
| StyI | CCWWGG | 4 cut(s) | 300, 1193, 1564, 2259 |
| TaaI | ACNGT | 6 cut(s) | 470, 902, 1405, 1686, 1728, 2007 |
| TaiI | ACGT | 3 cut(s) | 531, 1369, 1473 |
| TaqI | TCGA | 6 cut(s) | 493, 551, 648, 1535, 1596, 1950 |
| TatI | WGTACW | 1 cut(s) | 1907 |
| TauI | GCSGC | 2 cut(s) | 49, 2003 |
| TscAI | CASTG | 4 cut(s) | 571, 624, 1080, 2010 |
| TseFI | GTSAC | 4 cut(s) | 529, 705, 1410, 1481 |
| TseI | GCWGC | 3 cut(s) | 392, 965, 2063 |
| Tsp45I | GTSAC | 4 cut(s) | 529, 705, 1410, 1481 |
| TspDTI | ATGAA | 9 cut(s) | 225, 232, 626, 834, 1219, 1857, 1936, 2109, 2189 |
| TspGWI | ACGGA | 1 cut(s) | 900 |
| TspMI | CCCGGG | 1 cut(s) | 1973 |
| TspRI | CASTG | 4 cut(s) | 571, 624, 1080, 2010 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 451, 1433 |
| VneI | GTGCAC | 1 cut(s) | 1329 |
| VpaK11BI | GGWCC | 3 cut(s) | 272, 297, 643 |
| XapI | RAATTY | 7 cut(s) | 51, 114, 781, 934, 1166, 1267, 1552 |
| XceI | RCATGY | 1 cut(s) | 588 |
| XmaI | CCCGGG | 1 cut(s) | 1973 |
| XmiI | GTMKAC | 1 cut(s) | 82 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2116 |
| XspI | CTAG | 2 cut(s) | 1130, 1968 |
| Zsp2I | ATGCAT | 1 cut(s) | 2126 |