Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0016762

Physical Location & Seq

Genomic Coordinates Reverse (-)

21601689 .. 21603428

Gene Structure 1740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G251100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGAATGTCAATATTCTGTTAGTGGCCTTTGTAGTTTGTGGCCTTCTAGGGGCCTGCCAAGGAGGCCAGCTGAGGAAGAATTTCTACCGGAGCACGTGTCCTTCAGCAGAGGAGATTGTCAGAAATGTCACCTGGAACCATGTCTCCAGTAACCCCAACTTGCCAGCAAAGCTCTTGAGAATGCATTTCCATGACTGTTTCGTCAGGGGTTGTGATGGCTCAGTTTTGTTGAATTCGACAGCAAACAACACGGCAGAGAAGGACGCAGCTCCAAACTTATCTTTGGCAGGTTTTAATGTTATTGATGATATCAAAGAAAACCTAGAGAACAAGTGTCCAGGAATTGTATCTTGTGCTGACATCTTGGCTTTGGCTGCCAGAGACTCTGTTTCATTCCAATTCAAAAGATCGTTGTGGAAAGTGCTCACGGGTAGAAGAGACGGCACAATTTCACGAACTAGAGAGGCCTTGATCAACATTCCACCACCTGCCTTCAATTTCACCCAACTCAAACAGCGCTTTGCCAGCAAGAATCTTACAGTACATGACCTTGTGGTTTTATCAGGTTCACACACAATTGGAGTAGGGCACTGCCCCACCTTTAGCAACAGGCTCTACAACTTCACTGGAAAGGGTGACCAAGACCCTTCTCTGAATGCAACCTATGCTGCATTCCTCAAGACTAAATGCCCAAGCCTCAACGACACTACAACCACTGTGGAAATGGACCCTGGGAGCTCTTTAAAATTTGACACTGGCTACTATGCCACCCTCAAGCAGCACAAGGGACTCTTCCAATCTGATGCAGCCCTTTTAACAAACAAGGGTGCCGCCAATATCGTCCAGGAATTGGGTGACAATGACAAGTTCTTCGCAGAGTTTGCTCAATCAATGGTGAGGATGGGAGCCATTGAGGTCCTCACAGGCACGTCCGGTGAGATTAGGAGCAAATGTTGGGCTGTGAATTCCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009266 GO:0009269 GO:0009409 GO:0009414 GO:0009415 GO:0009505 GO:0009506 GO:0009628 GO:0009636 GO:0009651 GO:0009664 GO:0009987 GO:0010035 GO:0012505 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

325

Amino Acids

35.32

Weight (kDa)

8.64

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016762)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g26620
malus_domestica	MD03G1274400.v1.1 MD03G1274500.v1.1
prunus_persica	Prupe.8G251100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0295471
rosa_laevigata	RLG00000011798
rosa_multiflora	Rmu_co8105696.1_g000001 Rmu_ssc0000464.1_g000001
rosa_rugosa	Rorug06G0251200
rosa_samantha	Rh6AG364400 Rh6BG372700 Rh6CG379000 Rh6DG365400
rosa_wichuraiana	Rw6G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	496
AasI	GACNNNNNNGTC	1 cut(s)	200
Acc36I	ACCTGC	2 cut(s)	278, 496
AccB1I	GGYRCC	1 cut(s)	827
AccB7I	CCANNNNNTGG	1 cut(s)	850
AciI	CCGC	1 cut(s)	831
AcsI	RAATTY	4 cut(s)	79, 232, 746, 964
AcuI	CTGAAG	1 cut(s)	87
AcvI	CACGTG	1 cut(s)	96
AfaI	GTAC	1 cut(s)	543
AfeI	AGCGCT	1 cut(s)	518
AfiI	CCNNNNNNNGG	2 cut(s)	49, 850
AflIII	ACRYGT	1 cut(s)	95
AgsI	TTSAA	3 cut(s)	232, 403, 496
AjiI	CACGTC	1 cut(s)	930
AjnI	CCWGG	4 cut(s)	131, 337, 730, 843
AloI	GAACNNNNNNTCC	2 cut(s)	128, 160
AluBI	AGCT	4 cut(s)	70, 172, 269, 738
AluI	AGCT	4 cut(s)	70, 172, 269, 738
Alw21I	GWGCWC	3 cut(s)	95, 426, 740
Alw26I	GTCTC	3 cut(s)	148, 375, 432
Aor51HI	AGCGCT	1 cut(s)	518
AoxI	GGCC	5 cut(s)	24, 40, 51, 64, 465
ApeKI	GCWGC	5 cut(s)	266, 374, 668, 778, 806
ApoI	RAATTY	4 cut(s)	79, 232, 746, 964
ArsI	GACNNNNNNTTYG	2 cut(s)	854, 886
Asp700I	GAANNNNTTC	1 cut(s)	80
AspLEI	GCGC	1 cut(s)	519
AspS9I	GGNCC	3 cut(s)	51, 727, 916
AsuHPI	GGTGA	6 cut(s)	121, 493, 647, 866, 907, 947
AvaII	GGWCC	2 cut(s)	727, 916
BaeGI	GKGCMC	1 cut(s)	591
BanI	GGYRCC	1 cut(s)	827
BanII	GRGCYC	1 cut(s)	740
BarI	GAAGNNNNNNTAC	2 cut(s)	68, 100
BbrPI	CACGTG	1 cut(s)	96
Bbv12I	GWGCWC	3 cut(s)	95, 426, 740
BbvCI	CCTCAGC	1 cut(s)	71
BbvI	GCAGC	5 cut(s)	278, 361, 655, 790, 818
BccI	CCATC	2 cut(s)	209, 895
BceAI	ACGGC	2 cut(s)	267, 457
BciT130I	CCWGG	4 cut(s)	133, 339, 732, 845
BclI	TGATCA	1 cut(s)	471
BcoDI	GTCTC	3 cut(s)	148, 375, 432
BfaI	CTAG	3 cut(s)	47, 323, 459
BfoI	RGCGCY	1 cut(s)	520
BfuAI	ACCTGC	2 cut(s)	278, 496
BglI	GCCNNNNNGGC	1 cut(s)	63
BisI	GCNGC	6 cut(s)	267, 375, 669, 779, 807, 831
BlsI	GCNGC	6 cut(s)	268, 376, 670, 780, 808, 832
Bme1390I	CCNGG	4 cut(s)	133, 339, 732, 845
Bme18I	GGWCC	2 cut(s)	727, 916
BmgBI	CACGTC	1 cut(s)	930
BmgT120I	GGNCC	3 cut(s)	51, 727, 916
BmiI	GGNNCC	5 cut(s)	52, 137, 729, 829, 907
BmrFI	CCNGG	4 cut(s)	133, 339, 732, 845
BmsI	GCATC	1 cut(s)	793
BpmI	CTGGAG	1 cut(s)	130
Bpu10I	CCTNAGC	1 cut(s)	71
BpuEI	CTTGAG	3 cut(s)	196, 662, 758
BsaAI	YACGTR	1 cut(s)	96
BsaJI	CCNNGG	3 cut(s)	58, 730, 731
BsaWI	WCCGGW	2 cut(s)	87, 932
BsaXI	ACNNNNNCTCC	6 cut(s)	82, 112, 128, 158, 937, 967
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 850
Bse1I	ACTGG	3 cut(s)	147, 631, 760
BseBI	CCWGG	4 cut(s)	133, 339, 732, 845
BseDI	CCNNGG	3 cut(s)	58, 730, 731
BseGI	GGATG	1 cut(s)	906
BseLI	CCNNNNNNNGG	2 cut(s)	49, 850
BseMII	CTCAG	2 cut(s)	62, 234
BseNI	ACTGG	3 cut(s)	147, 631, 760
BseRI	GAGGAG	1 cut(s)	125
BseSI	GKGCMC	1 cut(s)	591
BseXI	GCAGC	5 cut(s)	278, 361, 655, 790, 818
BshFI	GGCC	5 cut(s)	26, 42, 53, 66, 467
BshNI	GGYRCC	1 cut(s)	827
BsiHKAI	GWGCWC	3 cut(s)	95, 426, 740
BsiSI	CCGG	2 cut(s)	88, 933
BslFI	GGGAC	1 cut(s)	801
BslI	CCNNNNNNNGG	2 cut(s)	49, 850
BsmAI	GTCTC	3 cut(s)	148, 375, 432
BsmBI	CGTCTC	1 cut(s)	432
BsmFI	GGGAC	1 cut(s)	801
BsmI	GAATGC	3 cut(s)	186, 661, 671
BsnI	GGCC	5 cut(s)	26, 42, 53, 66, 467
Bsp1286I	GDGCHC	4 cut(s)	95, 426, 591, 740
Bsp143I	GATC	2 cut(s)	407, 471
BspACI	CCGC	1 cut(s)	831
BspANI	GGCC	5 cut(s)	26, 42, 53, 66, 467
BspCNI	CTCAG	2 cut(s)	63, 233
BspLI	GGNNCC	5 cut(s)	52, 137, 729, 829, 907
BspMI	ACCTGC	2 cut(s)	278, 496
BspT107I	GGYRCC	1 cut(s)	827
BsrI	ACTGG	3 cut(s)	147, 631, 760
BssECI	CCNNGG	3 cut(s)	58, 730, 731
BssMI	GATC	2 cut(s)	407, 471
BssT1I	CCWWGG	1 cut(s)	58
Bst2UI	CCWGG	4 cut(s)	133, 339, 732, 845
Bst4CI	ACNGT	3 cut(s)	197, 541, 718
Bst6I	CTCTTC	2 cut(s)	430, 797
BstAPI	GCANNNNNTGC	2 cut(s)	665, 881
BstBAI	YACGTR	1 cut(s)	96
BstC8I	GCNNGC	4 cut(s)	55, 68, 165, 526
BstDEI	CTNAG	2 cut(s)	71, 220
BstEII	GGTNACC	1 cut(s)	635
BstF5I	GGATG	1 cut(s)	906
BstH2I	RGCGCY	1 cut(s)	520
BstHHI	GCGC	1 cut(s)	519
BstKTI	GATC	2 cut(s)	410, 474
BstMAI	GTCTC	3 cut(s)	148, 375, 432
BstMBI	GATC	2 cut(s)	407, 471
BstMWI	GCNNNNNNNGC	6 cut(s)	63, 169, 374, 525, 665, 881
BstNI	CCWGG	4 cut(s)	133, 339, 732, 845
BstPI	GGTNACC	1 cut(s)	635
BstSCI	CCNGG	4 cut(s)	131, 337, 730, 843
BstSLI	GKGCMC	1 cut(s)	591
BstV1I	GCAGC	5 cut(s)	278, 361, 655, 790, 818
BsuRI	GGCC	5 cut(s)	26, 42, 53, 66, 467
BtrI	CACGTC	1 cut(s)	930
BtsCI	GGATG	1 cut(s)	906
BtsI	GCAGTG	1 cut(s)	589
BtsIMutI	CAGTG	4 cut(s)	589, 624, 714, 753
BveI	ACCTGC	2 cut(s)	278, 496
Cac8I	GCNNGC	4 cut(s)	55, 68, 165, 526
CfoI	GCGC	1 cut(s)	519
Cfr13I	GGNCC	3 cut(s)	51, 727, 916
CseI	GACGC	1 cut(s)	272
Csp6I	GTAC	1 cut(s)	542
CspCI	CAANNNNNGTGG	2 cut(s)	699, 734
CviAII	CATG	3 cut(s)	140, 191, 545
CviQI	GTAC	1 cut(s)	542
DdeI	CTNAG	2 cut(s)	71, 220
DpnI	GATC	2 cut(s)	409, 473
DpnII	GATC	2 cut(s)	407, 471
DraI	TTTAAA	1 cut(s)	744
DrdI	GACNNNNNNGTC	1 cut(s)	200
DseDI	GACNNNNNNGTC	1 cut(s)	200
Eam1104I	CTCTTC	2 cut(s)	430, 797
EarI	CTCTTC	2 cut(s)	430, 797
Ecl136II	GAGCTC	1 cut(s)	738
Eco130I	CCWWGG	1 cut(s)	58
Eco147I	AGGCCT	1 cut(s)	467
Eco24I	GRGCYC	1 cut(s)	740
Eco32I	GATATC	1 cut(s)	310
Eco47I	GGWCC	2 cut(s)	727, 916
Eco47III	AGCGCT	1 cut(s)	518
Eco53kI	GAGCTC	1 cut(s)	738
Eco57I	CTGAAG	1 cut(s)	87
Eco72I	CACGTG	1 cut(s)	96
Eco91I	GGTNACC	1 cut(s)	635
EcoICRI	GAGCTC	1 cut(s)	738
EcoO109I	RGGNCCY	2 cut(s)	51, 916
EcoO65I	GGTNACC	1 cut(s)	635
EcoRI	GAATTC	2 cut(s)	232, 964
EcoRII	CCWGG	4 cut(s)	131, 337, 730, 843
EcoRV	GATATC	1 cut(s)	310
EcoT14I	CCWWGG	1 cut(s)	58
EcoT22I	ATGCAT	1 cut(s)	186
EcoT38I	GRGCYC	1 cut(s)	740
ErhI	CCWWGG	1 cut(s)	58
Esp3I	CGTCTC	1 cut(s)	432
FaeI	CATG	3 cut(s)	143, 194, 548
FaiI	YATR	5 cut(s)	141, 192, 546, 666, 765
FalI	AAGNNNNNCTT	2 cut(s)	776, 808
FaqI	GGGAC	1 cut(s)	801
FatI	CATG	3 cut(s)	139, 190, 544
FbaI	TGATCA	1 cut(s)	471
Fnu4HI	GCNGC	6 cut(s)	267, 375, 669, 779, 807, 831
FokI	GGATG	1 cut(s)	913
FriOI	GRGCYC	1 cut(s)	740
Fsp4HI	GCNGC	6 cut(s)	267, 375, 669, 779, 807, 831
FspBI	CTAG	3 cut(s)	47, 323, 459
GlaI	GCGC	1 cut(s)	518
GluI	GCNGC	6 cut(s)	267, 375, 669, 779, 807, 831
GsuI	CTGGAG	1 cut(s)	130
HaeII	RGCGCY	1 cut(s)	520
HaeIII	GGCC	5 cut(s)	26, 42, 53, 66, 467
HapII	CCGG	2 cut(s)	88, 933
HgaI	GACGC	1 cut(s)	272
HhaI	GCGC	1 cut(s)	519
Hin1II	CATG	3 cut(s)	143, 194, 548
Hin6I	GCGC	1 cut(s)	517
HinP1I	GCGC	1 cut(s)	517
HinfI	GANTC	3 cut(s)	383, 532, 789
HpaII	CCGG	2 cut(s)	88, 933
HphI	GGTGA	6 cut(s)	121, 493, 647, 866, 907, 947
Hpy166II	GTNNAC	1 cut(s)	569
Hpy188I	TCNGA	3 cut(s)	122, 654, 802
Hpy188III	TCNNGA	3 cut(s)	175, 453, 679
Hpy8I	GTNNAC	1 cut(s)	569
HpyAV	CCTTC	5 cut(s)	53, 111, 253, 502, 657
HpyCH4III	ACNGT	3 cut(s)	197, 541, 718
HpyCH4IV	ACGT	2 cut(s)	95, 929
HpyCH4V	TGCA	4 cut(s)	184, 659, 671, 806
HpyF10VI	GCNNNNNNNGC	6 cut(s)	63, 169, 374, 525, 665, 881
HpyF3I	CTNAG	2 cut(s)	71, 220
HpySE526I	ACGT	2 cut(s)	95, 929
Hsp92II	CATG	3 cut(s)	143, 194, 548
HspAI	GCGC	1 cut(s)	517
Ksp22I	TGATCA	1 cut(s)	471
Kzo9I	GATC	2 cut(s)	407, 471
LmnI	GCTCC	5 cut(s)	90, 274, 735, 905, 945
Lsp1109I	GCAGC	5 cut(s)	278, 361, 655, 790, 818
LweI	GCATC	1 cut(s)	793
MaeI	CTAG	3 cut(s)	47, 323, 459
MaeII	ACGT	2 cut(s)	95, 929
MaeIII	GTNAC	4 cut(s)	127, 149, 635, 854
MalI	GATC	2 cut(s)	409, 473
MboI	GATC	2 cut(s)	407, 471
MboII	GAAGA	4 cut(s)	88, 447, 784, 862
MfeI	CAATTG	1 cut(s)	576
MhlI	GDGCHC	4 cut(s)	95, 426, 591, 740
MlyI	GAGTC	2 cut(s)	377, 783
Mph1103I	ATGCAT	1 cut(s)	186
MroXI	GAANNNNTTC	1 cut(s)	80
MseI	TTAA	4 cut(s)	294, 743, 815, 973
MslI	CAYNNNNRTG	1 cut(s)	189
MspA1I	CMGCKG	1 cut(s)	70
MspI	CCGG	2 cut(s)	88, 933
MspR9I	CCNGG	4 cut(s)	133, 339, 732, 845
MunI	CAATTG	1 cut(s)	576
Mva1269I	GAATGC	3 cut(s)	186, 661, 671
MvaI	CCWGG	4 cut(s)	133, 339, 732, 845
MwoI	GCNNNNNNNGC	6 cut(s)	63, 169, 374, 525, 665, 881
NdeII	GATC	2 cut(s)	407, 471
NlaIII	CATG	3 cut(s)	143, 194, 548
NlaIV	GGNNCC	5 cut(s)	52, 137, 729, 829, 907
NmuCI	GTSAC	3 cut(s)	127, 635, 854
NsiI	ATGCAT	1 cut(s)	186
PaqCI	CACCTGC	1 cut(s)	496
PasI	CCCWGGG	1 cut(s)	731
PceI	AGGCCT	1 cut(s)	467
PctI	GAATGC	3 cut(s)	186, 661, 671
PdmI	GAANNNNTTC	1 cut(s)	80
PfeI	GAWTC	1 cut(s)	532
PflMI	CCANNNNNTGG	1 cut(s)	850
PfoI	TCCNGGA	2 cut(s)	337, 843
PkrI	GCNGC	6 cut(s)	268, 376, 670, 780, 808, 832
PleI	GAGTC	2 cut(s)	377, 783
PmaCI	CACGTG	1 cut(s)	96
PmlI	CACGTG	1 cut(s)	96
PpsI	GAGTC	2 cut(s)	377, 783
Ppu21I	YACGTR	1 cut(s)	96
PpuMI	RGGWCCY	1 cut(s)	916
Psp124BI	GAGCTC	1 cut(s)	740
Psp5II	RGGWCCY	1 cut(s)	916
Psp6I	CCWGG	4 cut(s)	131, 337, 730, 843
PspCI	CACGTG	1 cut(s)	96
PspEI	GGTNACC	1 cut(s)	635
PspGI	CCWGG	4 cut(s)	131, 337, 730, 843
PspN4I	GGNNCC	5 cut(s)	52, 137, 729, 829, 907
PspPI	GGNCC	3 cut(s)	51, 727, 916
PspPPI	RGGWCCY	1 cut(s)	916
PvuII	CAGCTG	1 cut(s)	70
RsaI	GTAC	1 cut(s)	543
RsaNI	GTAC	1 cut(s)	542
RseI	CAYNNNNRTG	1 cut(s)	189
SacI	GAGCTC	1 cut(s)	740
SaqAI	TTAA	4 cut(s)	294, 743, 815, 973
SatI	GCNGC	6 cut(s)	267, 375, 669, 779, 807, 831
Sau3AI	GATC	2 cut(s)	407, 471
Sau96I	GGNCC	3 cut(s)	51, 727, 916
SchI	GAGTC	2 cut(s)	377, 783
ScrFI	CCNGG	4 cut(s)	133, 339, 732, 845
SduI	GDGCHC	4 cut(s)	95, 426, 591, 740
SfaNI	GCATC	1 cut(s)	793
SinI	GGWCC	2 cut(s)	727, 916
SmiMI	CAYNNNNRTG	1 cut(s)	189
SmlI	CTYRAG	3 cut(s)	175, 677, 773
SmoI	CTYRAG	3 cut(s)	175, 677, 773
SseBI	AGGCCT	1 cut(s)	467
SsiI	CCGC	1 cut(s)	831
SspI	AATATT	1 cut(s)	13
SspMI	CTAG	3 cut(s)	47, 323, 459
SstI	GAGCTC	1 cut(s)	740
StuI	AGGCCT	1 cut(s)	467
StyD4I	CCNGG	4 cut(s)	131, 337, 730, 843
StyI	CCWWGG	1 cut(s)	58
TaaI	ACNGT	3 cut(s)	197, 541, 718
TaiI	ACGT	2 cut(s)	98, 932
TaqI	TCGA	1 cut(s)	236
TatI	WGTACW	1 cut(s)	541
TauI	GCSGC	1 cut(s)	833
TfiI	GAWTC	1 cut(s)	532
Tru1I	TTAA	4 cut(s)	294, 743, 815, 973
Tru9I	TTAA	4 cut(s)	294, 743, 815, 973
TscAI	CASTG	4 cut(s)	596, 631, 721, 760
TseFI	GTSAC	3 cut(s)	127, 635, 854
TseI	GCWGC	5 cut(s)	266, 374, 668, 778, 806
Tsp45I	GTSAC	3 cut(s)	127, 635, 854
TspDTI	ATGAA	2 cut(s)	17, 381
TspRI	CASTG	4 cut(s)	596, 631, 721, 760
Van91I	CCANNNNNTGG	1 cut(s)	850
VpaK11BI	GGWCC	2 cut(s)	727, 916
XapI	RAATTY	4 cut(s)	79, 232, 746, 964
XcmI	CCANNNNNNNNNTGG	1 cut(s)	721
XmnI	GAANNNNTTC	1 cut(s)	80
XspI	CTAG	3 cut(s)	47, 323, 459
Zsp2I	ATGCAT	1 cut(s)	186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.