Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0012965

Physical Location & Seq

Genomic Coordinates Reverse (-)

21739259 .. 21740068

Gene Structure 810 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G254200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 312 bp

ATGGACAAAGTAATGAGGTTGGCATCAGAGAAGGGTGTGGTGATTTTTAGCAAGAGCTCATGTTGCCTGTGCTATGCAGTTAACATTCTATTTCAAGAGATTGGGGTGAGTCCTGTGGTTCATGAGATTGACCAAGATCCTGACGGCAGGGAAATGGAGAAGGCTCTTATGAGGCTGGGGTGCACTGCCCCCGTGCCGGCTGTGTTCATAGGCGGAACCCTGGTGGGATCAACCAATGAAGTCATGTCCCTCCACCTAAAAGGCCAACTCATCCCAAAGCTGAAGCCTCACCAGCAGCAGACTATGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0044424 GO:0044464 GO:0050896 GO:0051716 GO:0071496

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

104

Amino Acids

11.23

Weight (kDa)

6.81

Isoelectric Point (pI)

52.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06830 AT2G30540 AT2G47880 AT3G62960
fragaria_vesca	FvH4_2g24940
malus_domestica	MD03G1277900.v1.1 MD11G1299800.v1.1
prunus_persica	Prupe.8G254200_v2.0.a1
pyrus_communis	pycom03g22130 pycom11g26350
rosa_chinensis	RchiOBHm_Chr6g0292861
rosa_laevigata	RLG00000011986
rosa_rugosa	Rorug06G0230300
rosa_samantha	Rh6AG343600 Rh6BG350800 Rh6CG357800 Rh6DG343700
rosa_wichuraiana	Rw6G029970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	213
AclWI	GGATC	2 cut(s)	131, 235
AcuI	CTGAAG	1 cut(s)	302
AfiI	CCNNNNNNNGG	1 cut(s)	196
AgsI	TTSAA	1 cut(s)	95
AjnI	CCWGG	1 cut(s)	219
AluBI	AGCT	2 cut(s)	57, 280
AluI	AGCT	2 cut(s)	57, 280
Alw21I	GWGCWC	2 cut(s)	59, 185
Alw44I	GTGCAC	1 cut(s)	181
AlwI	GGATC	2 cut(s)	131, 235
AoxI	GGCC	1 cut(s)	262
ApaLI	GTGCAC	1 cut(s)	181
ApeKI	GCWGC	1 cut(s)	295
AsuHPI	GGTGA	3 cut(s)	52, 118, 281
BaeGI	GKGCMC	1 cut(s)	185
BanII	GRGCYC	1 cut(s)	59
Bbv12I	GWGCWC	2 cut(s)	59, 185
BbvI	GCAGC	1 cut(s)	307
BceAI	ACGGC	1 cut(s)	160
BciT130I	CCWGG	1 cut(s)	221
BisI	GCNGC	1 cut(s)	296
BlsI	GCNGC	1 cut(s)	297
Bme1390I	CCNGG	1 cut(s)	221
BmiI	GGNNCC	1 cut(s)	217
BmrFI	CCNGG	1 cut(s)	221
BmsI	GCATC	1 cut(s)	32
BsaJI	CCNNGG	1 cut(s)	219
Bsc4I	CCNNNNNNNGG	1 cut(s)	196
Bse118I	RCCGGY	1 cut(s)	196
BseBI	CCWGG	1 cut(s)	221
BseDI	CCNNGG	1 cut(s)	219
BseGI	GGATG	1 cut(s)	270
BseLI	CCNNNNNNNGG	1 cut(s)	196
BseSI	GKGCMC	1 cut(s)	185
BseXI	GCAGC	1 cut(s)	307
BseYI	CCCAGC	1 cut(s)	175
BshFI	GGCC	1 cut(s)	264
BsiHKAI	GWGCWC	2 cut(s)	59, 185
BsiSI	CCGG	1 cut(s)	197
BslFI	GGGAC	1 cut(s)	232
BslI	CCNNNNNNNGG	1 cut(s)	196
BsmFI	GGGAC	1 cut(s)	232
BsnI	GGCC	1 cut(s)	264
Bsp1286I	GDGCHC	2 cut(s)	59, 185
Bsp143I	GATC	2 cut(s)	136, 227
BspACI	CCGC	1 cut(s)	213
BspANI	GGCC	1 cut(s)	264
BspHI	TCATGA	1 cut(s)	121
BspLI	GGNNCC	1 cut(s)	217
BspPI	GGATC	2 cut(s)	131, 235
BsrFI	RCCGGY	1 cut(s)	196
BssAI	RCCGGY	1 cut(s)	196
BssECI	CCNNGG	1 cut(s)	219
BssMI	GATC	2 cut(s)	136, 227
Bst2UI	CCWGG	1 cut(s)	221
BstC8I	GCNNGC	1 cut(s)	198
BstF5I	GGATG	1 cut(s)	270
BstKTI	GATC	2 cut(s)	139, 230
BstMBI	GATC	2 cut(s)	136, 227
BstMWI	GCNNNNNNNGC	2 cut(s)	63, 292
BstNI	CCWGG	1 cut(s)	221
BstSCI	CCNGG	1 cut(s)	219
BstSLI	GKGCMC	1 cut(s)	185
BstV1I	GCAGC	1 cut(s)	307
BstX2I	RGATCY	1 cut(s)	136
BstYI	RGATCY	1 cut(s)	136
BsuRI	GGCC	1 cut(s)	264
BtsCI	GGATG	1 cut(s)	270
BtsI	GCAGTG	1 cut(s)	183
BtsIMutI	CAGTG	1 cut(s)	183
Cac8I	GCNNGC	1 cut(s)	198
CciI	TCATGA	1 cut(s)	121
Cfr10I	RCCGGY	1 cut(s)	196
CviAII	CATG	3 cut(s)	60, 122, 244
CviJI	RGCY	7 cut(s)	57, 164, 175, 200, 264, 280, 286
CviKI_1	RGCY	7 cut(s)	57, 164, 175, 200, 264, 280, 286
DpnI	GATC	2 cut(s)	138, 229
DpnII	GATC	2 cut(s)	136, 227
EciI	GGCGGA	1 cut(s)	228
Ecl136II	GAGCTC	1 cut(s)	57
Eco24I	GRGCYC	1 cut(s)	59
Eco53kI	GAGCTC	1 cut(s)	57
Eco57I	CTGAAG	1 cut(s)	302
EcoICRI	GAGCTC	1 cut(s)	57
EcoRII	CCWGG	1 cut(s)	219
EcoT38I	GRGCYC	1 cut(s)	59
FaeI	CATG	3 cut(s)	63, 125, 247
FaiI	YATR	7 cut(s)	61, 75, 123, 170, 209, 245, 305
FaqI	GGGAC	1 cut(s)	232
FatI	CATG	3 cut(s)	59, 121, 243
Fnu4HI	GCNGC	1 cut(s)	296
FokI	GGATG	1 cut(s)	257
FriOI	GRGCYC	1 cut(s)	59
Fsp4HI	GCNGC	1 cut(s)	296
GluI	GCNGC	1 cut(s)	296
GsaI	CCCAGC	1 cut(s)	179
HaeIII	GGCC	1 cut(s)	264
HapII	CCGG	1 cut(s)	197
Hin1II	CATG	3 cut(s)	63, 125, 247
HincII	GTYRAC	1 cut(s)	82
HindII	GTYRAC	1 cut(s)	82
HinfI	GANTC	1 cut(s)	109
HpaI	GTTAAC	1 cut(s)	82
HpaII	CCGG	1 cut(s)	197
HphI	GGTGA	3 cut(s)	52, 118, 281
Hpy166II	GTNNAC	2 cut(s)	82, 183
Hpy188I	TCNGA	1 cut(s)	28
Hpy188III	TCNNGA	3 cut(s)	95, 122, 140
Hpy8I	GTNNAC	2 cut(s)	82, 183
HpyAV	CCTTC	2 cut(s)	25, 154
HpyCH4V	TGCA	2 cut(s)	77, 183
HpyF10VI	GCNNNNNNNGC	2 cut(s)	63, 292
Hsp92II	CATG	3 cut(s)	63, 125, 247
KroI	GCCGGC	1 cut(s)	196
KroNI	GCCGGC	1 cut(s)	198
KspAI	GTTAAC	1 cut(s)	82
Kzo9I	GATC	2 cut(s)	136, 227
LpnPI	CCDG	9 cut(s)	80, 126, 133, 153, 161, 206, 210, 233, 305
Lsp1109I	GCAGC	1 cut(s)	307
LweI	GCATC	1 cut(s)	32
MalI	GATC	2 cut(s)	138, 229
MboI	GATC	2 cut(s)	136, 227
MflI	RGATCY	1 cut(s)	136
MhlI	GDGCHC	2 cut(s)	59, 185
MlyI	GAGTC	1 cut(s)	118
MnlI	CCTC	4 cut(s)	9, 165, 260, 297
MroNI	GCCGGC	1 cut(s)	196
MseI	TTAA	2 cut(s)	81, 310
MspI	CCGG	1 cut(s)	197
MspR9I	CCNGG	1 cut(s)	221
MvaI	CCWGG	1 cut(s)	221
MwoI	GCNNNNNNNGC	2 cut(s)	63, 292
NaeI	GCCGGC	1 cut(s)	198
NdeII	GATC	2 cut(s)	136, 227
NgoMIV	GCCGGC	1 cut(s)	196
NlaIII	CATG	3 cut(s)	63, 125, 247
NlaIV	GGNNCC	1 cut(s)	217
PagI	TCATGA	1 cut(s)	121
PdiI	GCCGGC	1 cut(s)	198
PflFI	GACNNNGTC	1 cut(s)	304
PkrI	GCNGC	1 cut(s)	297
PleI	GAGTC	1 cut(s)	117
PpsI	GAGTC	1 cut(s)	117
Psp124BI	GAGCTC	1 cut(s)	59
Psp6I	CCWGG	1 cut(s)	219
PspFI	CCCAGC	1 cut(s)	175
PspGI	CCWGG	1 cut(s)	219
PspN4I	GGNNCC	1 cut(s)	217
PsuI	RGATCY	1 cut(s)	136
PsyI	GACNNNGTC	1 cut(s)	304
SacI	GAGCTC	1 cut(s)	59
SaqAI	TTAA	2 cut(s)	81, 310
SatI	GCNGC	1 cut(s)	296
Sau3AI	GATC	2 cut(s)	136, 227
SchI	GAGTC	1 cut(s)	118
ScrFI	CCNGG	1 cut(s)	221
SduI	GDGCHC	2 cut(s)	59, 185
SetI	ASST	4 cut(s)	20, 59, 258, 282
SfaNI	GCATC	1 cut(s)	32
SsiI	CCGC	1 cut(s)	213
SstI	GAGCTC	1 cut(s)	59
StyD4I	CCNGG	1 cut(s)	219
Tru1I	TTAA	2 cut(s)	81, 310
Tru9I	TTAA	2 cut(s)	81, 310
TscAI	CASTG	1 cut(s)	190
TseI	GCWGC	1 cut(s)	295
TspDTI	ATGAA	3 cut(s)	110, 196, 252
TspRI	CASTG	1 cut(s)	190
Tth111I	GACNNNGTC	1 cut(s)	304
VneI	GTGCAC	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.