Helicase-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1250900.v1.1 |
| pyrus_communis | pycom01g00790 pycom04g12840 pycom07g06730 pycom09g09450 pycom10g08510 pycom10g11040 pycom14g09590 pycom520g00570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1130 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3147 |
| Acc65I | GGTACC | 1 cut(s) | 419 |
| AccB1I | GGYRCC | 2 cut(s) | 419, 1282 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 405, 1849, 2175, 3162, 3332 |
| AccBSI | CCGCTC | 1 cut(s) | 3030 |
| AccI | GTMKAC | 3 cut(s) | 432, 2035, 3151 |
| AccII | CGCG | 2 cut(s) | 63, 1673 |
| AcoI | YGGCCR | 2 cut(s) | 1596, 1676 |
| AcuI | CTGAAG | 1 cut(s) | 2381 |
| AcyI | GRCGYC | 1 cut(s) | 2969 |
| AfaI | GTAC | 7 cut(s) | 421, 458, 787, 892, 1805, 3037, 3178 |
| AflII | CTTAAG | 1 cut(s) | 1006 |
| AflIII | ACRYGT | 2 cut(s) | 294, 375 |
| AjiI | CACGTC | 2 cut(s) | 376, 3143 |
| AjnI | CCWGG | 1 cut(s) | 1995 |
| Alw21I | GWGCWC | 3 cut(s) | 1436, 2656, 2928 |
| Alw44I | GTGCAC | 1 cut(s) | 2652 |
| Ama87I | CYCGRG | 1 cut(s) | 2986 |
| AoxI | GGCC | 7 cut(s) | 1596, 1676, 1684, 1984, 2319, 2364, 2538 |
| ApaLI | GTGCAC | 1 cut(s) | 2652 |
| ApeKI | GCWGC | 2 cut(s) | 674, 3134 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1993, 2025 |
| AscI | GGCGCGCC | 1 cut(s) | 61 |
| AseI | ATTAAT | 1 cut(s) | 2633 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 759, 2379 |
| Asp718I | GGTACC | 1 cut(s) | 419 |
| AspLEI | GCGC | 5 cut(s) | 63, 65, 1092, 1673, 3134 |
| AspS9I | GGNCC | 5 cut(s) | 1346, 1684, 1771, 2320, 2539 |
| AsuII | TTCGAA | 1 cut(s) | 1362 |
| AvaI | CYCGRG | 1 cut(s) | 2986 |
| AvaII | GGWCC | 2 cut(s) | 1346, 1771 |
| AxyI | CCTNAGG | 1 cut(s) | 2930 |
| BaeGI | GKGCMC | 1 cut(s) | 2656 |
| BalI | TGGCCA | 2 cut(s) | 1598, 1678 |
| BanI | GGYRCC | 2 cut(s) | 419, 1282 |
| BanII | GRGCYC | 1 cut(s) | 2987 |
| BauI | CACGAG | 1 cut(s) | 2936 |
| BbsI | GAAGAC | 2 cut(s) | 1405, 2502 |
| Bbv12I | GWGCWC | 3 cut(s) | 1436, 2656, 2928 |
| BbvI | GCAGC | 2 cut(s) | 661, 3121 |
| BccI | CCATC | 7 cut(s) | 155, 637, 971, 1480, 1695, 2173, 2311 |
| BceAI | ACGGC | 4 cut(s) | 1456, 1681, 2553, 2867 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 371, 405, 1272, 1306 |
| BciT130I | CCWGG | 1 cut(s) | 1997 |
| BclI | TGATCA | 1 cut(s) | 2946 |
| BfaI | CTAG | 8 cut(s) | 57, 185, 198, 971, 1311, 1982, 2954, 3126 |
| BfmI | CTRYAG | 2 cut(s) | 128, 675 |
| BfrI | CTTAAG | 1 cut(s) | 1006 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 2318, 2363, 2537 |
| BglII | AGATCT | 2 cut(s) | 731, 922 |
| BisI | GCNGC | 8 cut(s) | 675, 1649, 1669, 1987, 2826, 3031, 3109, 3135 |
| BlpI | GCTNAGC | 1 cut(s) | 713 |
| BlsI | GCNGC | 8 cut(s) | 676, 1650, 1670, 1988, 2827, 3032, 3110, 3136 |
| Bme1390I | CCNGG | 1 cut(s) | 1997 |
| Bme18I | GGWCC | 2 cut(s) | 1346, 1771 |
| BmeT110I | CYCGRG | 1 cut(s) | 2986 |
| BmgBI | CACGTC | 2 cut(s) | 376, 3143 |
| BmgT120I | GGNCC | 5 cut(s) | 1346, 1684, 1771, 2320, 2539 |
| BmiI | GGNNCC | 5 cut(s) | 24, 421, 1284, 1348, 3324 |
| BmrFI | CCNGG | 1 cut(s) | 1997 |
| BmrI | ACTGGG | 2 cut(s) | 2013, 2705 |
| BmsI | GCATC | 5 cut(s) | 539, 1918, 2777, 2856, 3119 |
| BmuI | ACTGGG | 2 cut(s) | 2013, 2705 |
| BpiI | GAAGAC | 2 cut(s) | 1405, 2502 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1127, 1159 |
| BpmI | CTGGAG | 2 cut(s) | 1129, 1979 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2963, 3250 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 713 |
| Bpu14I | TTCGAA | 1 cut(s) | 1362 |
| BpuEI | CTTGAG | 2 cut(s) | 50, 2230 |
| Bsa29I | ATCGAT | 2 cut(s) | 1475, 2596 |
| BsaAI | YACGTR | 2 cut(s) | 934, 2657 |
| BsaBI | GATNNNNATC | 3 cut(s) | 230, 1732, 1932 |
| BsaHI | GRCGYC | 1 cut(s) | 2969 |
| BsaJI | CCNNGG | 6 cut(s) | 1438, 1485, 1593, 1663, 2987, 3318 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1602, 1632, 1829, 1859, 3314, 3344 |
| Bse1I | ACTGG | 4 cut(s) | 1843, 2008, 2711, 3064 |
| Bse21I | CCTNAGG | 1 cut(s) | 2930 |
| Bse8I | GATNNNNATC | 3 cut(s) | 230, 1732, 1932 |
| BseBI | CCWGG | 1 cut(s) | 1997 |
| BseCI | ATCGAT | 2 cut(s) | 1475, 2596 |
| BseDI | CCNNGG | 6 cut(s) | 1438, 1485, 1593, 1663, 2987, 3318 |
| BseGI | GGATG | 7 cut(s) | 163, 1086, 1706, 2184, 2401, 2516, 2558 |
| BseJI | GATNNNNATC | 3 cut(s) | 230, 1732, 1932 |
| BseMII | CTCAG | 5 cut(s) | 65, 374, 1949, 2921, 3012 |
| BseNI | ACTGG | 4 cut(s) | 1843, 2008, 2711, 3064 |
| BsePI | GCGCGC | 1 cut(s) | 61 |
| BseRI | GAGGAG | 2 cut(s) | 1610, 2991 |
| BseSI | GKGCMC | 1 cut(s) | 2656 |
| BseXI | GCAGC | 2 cut(s) | 661, 3121 |
| BseYI | CCCAGC | 1 cut(s) | 1349 |
| Bsh1236I | CGCG | 2 cut(s) | 63, 1673 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1722 |
| BshFI | GGCC | 7 cut(s) | 1598, 1678, 1686, 1986, 2321, 2366, 2540 |
| BshNI | GGYRCC | 2 cut(s) | 419, 1282 |
| BshVI | ATCGAT | 2 cut(s) | 1475, 2596 |
| BsiEI | CGRYCG | 1 cut(s) | 1722 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1436, 2656, 2928 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2986 |
| BsiSI | CCGG | 1 cut(s) | 1280 |
| BslFI | GGGAC | 4 cut(s) | 378, 1007, 2730, 2989 |
| BsmFI | GGGAC | 4 cut(s) | 378, 1007, 2730, 2989 |
| BsnI | GGCC | 7 cut(s) | 1598, 1678, 1686, 1986, 2321, 2366, 2540 |
| BsoBI | CYCGRG | 1 cut(s) | 2986 |
| Bsp119I | TTCGAA | 1 cut(s) | 1362 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1436, 2656, 2928, 2987 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 713 |
| Bsp19I | CCATGG | 2 cut(s) | 1485, 3318 |
| BspANI | GGCC | 7 cut(s) | 1598, 1678, 1686, 1986, 2321, 2366, 2540 |
| BspCNI | CTCAG | 5 cut(s) | 64, 373, 1950, 2922, 3011 |
| BspDI | ATCGAT | 2 cut(s) | 1475, 2596 |
| BspFNI | CGCG | 2 cut(s) | 63, 1673 |
| BspHI | TCATGA | 1 cut(s) | 3051 |
| BspLI | GGNNCC | 5 cut(s) | 24, 421, 1284, 1348, 3324 |
| BspMAI | CTGCAG | 1 cut(s) | 679 |
| BspT104I | TTCGAA | 1 cut(s) | 1362 |
| BspT107I | GGYRCC | 2 cut(s) | 419, 1282 |
| BspTI | CTTAAG | 1 cut(s) | 1006 |
| BsrBI | CCGCTC | 1 cut(s) | 3030 |
| BsrI | ACTGG | 4 cut(s) | 1843, 2008, 2711, 3064 |
| BssECI | CCNNGG | 6 cut(s) | 1438, 1485, 1593, 1663, 2987, 3318 |
| BssHII | GCGCGC | 1 cut(s) | 61 |
| BssNI | GRCGYC | 1 cut(s) | 2969 |
| BssSI | CACGAG | 1 cut(s) | 2936 |
| BssT1I | CCWWGG | 3 cut(s) | 1485, 1593, 3318 |
| Bst2BI | CACGAG | 1 cut(s) | 2936 |
| Bst2UI | CCWGG | 1 cut(s) | 1997 |
| Bst4CI | ACNGT | 9 cut(s) | 132, 288, 456, 683, 1064, 1381, 1723, 2513, 3083 |
| Bst6I | CTCTTC | 1 cut(s) | 1206 |
| BstACI | GRCGYC | 1 cut(s) | 2969 |
| BstAFI | CTTAAG | 1 cut(s) | 1006 |
| BstBAI | YACGTR | 2 cut(s) | 934, 2657 |
| BstBI | TTCGAA | 1 cut(s) | 1362 |
| BstC8I | GCNNGC | 3 cut(s) | 63, 672, 2707 |
| BstDSI | CCRYGG | 4 cut(s) | 1438, 1485, 1663, 3318 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2962 |
| BstF5I | GGATG | 7 cut(s) | 163, 1086, 1706, 2184, 2401, 2516, 2558 |
| BstFNI | CGCG | 2 cut(s) | 63, 1673 |
| BstHHI | GCGC | 5 cut(s) | 63, 65, 1092, 1673, 3134 |
| BstMCI | CGRYCG | 1 cut(s) | 1722 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 67, 1440, 2318, 2363, 2537, 2792, 2801, 2932, 3255 |
| BstNI | CCWGG | 1 cut(s) | 1997 |
| BstSCI | CCNGG | 1 cut(s) | 1995 |
| BstSFI | CTRYAG | 2 cut(s) | 128, 675 |
| BstSLI | GKGCMC | 1 cut(s) | 2656 |
| BstUI | CGCG | 2 cut(s) | 63, 1673 |
| BstV1I | GCAGC | 2 cut(s) | 661, 3121 |
| BstV2I | GAAGAC | 2 cut(s) | 1405, 2502 |
| BstX2I | RGATCY | 6 cut(s) | 731, 922, 1808, 1839, 1896, 1933 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 314, 1153, 2003 |
| BstYI | RGATCY | 6 cut(s) | 731, 922, 1808, 1839, 1896, 1933 |
| Bsu15I | ATCGAT | 2 cut(s) | 1475, 2596 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2930 |
| BsuRI | GGCC | 7 cut(s) | 1598, 1678, 1686, 1986, 2321, 2366, 2540 |
| BsuTUI | ATCGAT | 2 cut(s) | 1475, 2596 |
| BtgI | CCRYGG | 4 cut(s) | 1438, 1485, 1663, 3318 |
| BtgZI | GCGATG | 1 cut(s) | 2806 |
| BtrI | CACGTC | 2 cut(s) | 376, 3143 |
| BtsCI | GGATG | 7 cut(s) | 163, 1086, 1706, 2184, 2401, 2516, 2558 |
| BtsIMutI | CAGTG | 3 cut(s) | 2056, 2718, 3057 |
| Cac8I | GCNNGC | 3 cut(s) | 63, 672, 2707 |
| CciI | TCATGA | 1 cut(s) | 3051 |
| CfoI | GCGC | 5 cut(s) | 63, 65, 1092, 1673, 3134 |
| Cfr13I | GGNCC | 5 cut(s) | 1346, 1684, 1771, 2320, 2539 |
| ClaI | ATCGAT | 2 cut(s) | 1475, 2596 |
| CseI | GACGC | 2 cut(s) | 2958, 3026 |
| Csp6I | GTAC | 7 cut(s) | 420, 457, 786, 891, 1804, 3036, 3177 |
| CviQI | GTAC | 7 cut(s) | 420, 457, 786, 891, 1804, 3036, 3177 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3147 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3147 |
| EaeI | YGGCCR | 2 cut(s) | 1596, 1676 |
| Eam1104I | CTCTTC | 1 cut(s) | 1206 |
| EarI | CTCTTC | 1 cut(s) | 1206 |
| EciI | GGCGGA | 3 cut(s) | 1458, 1850, 2881 |
| Eco130I | CCWWGG | 3 cut(s) | 1485, 1593, 3318 |
| Eco147I | AGGCCT | 1 cut(s) | 2366 |
| Eco24I | GRGCYC | 1 cut(s) | 2987 |
| Eco47I | GGWCC | 2 cut(s) | 1346, 1771 |
| Eco57I | CTGAAG | 1 cut(s) | 2381 |
| Eco81I | CCTNAGG | 1 cut(s) | 2930 |
| Eco88I | CYCGRG | 1 cut(s) | 2986 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2962 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1684 |
| EcoRI | GAATTC | 2 cut(s) | 46, 1267 |
| EcoRII | CCWGG | 1 cut(s) | 1995 |
| EcoT14I | CCWWGG | 3 cut(s) | 1485, 1593, 3318 |
| EcoT38I | GRGCYC | 1 cut(s) | 2987 |
| ErhI | CCWWGG | 3 cut(s) | 1485, 1593, 3318 |
| FaqI | GGGAC | 4 cut(s) | 378, 1007, 2730, 2989 |
| FauI | CCCGC | 1 cut(s) | 663 |
| FbaI | TGATCA | 1 cut(s) | 2946 |
| FblI | GTMKAC | 3 cut(s) | 432, 2035, 3151 |
| Fnu4HI | GCNGC | 8 cut(s) | 675, 1649, 1669, 1987, 2826, 3031, 3109, 3135 |
| FokI | GGATG | 7 cut(s) | 170, 1093, 1713, 2191, 2388, 2503, 2545 |
| FriOI | GRGCYC | 1 cut(s) | 2987 |
| Fsp4HI | GCNGC | 8 cut(s) | 675, 1649, 1669, 1987, 2826, 3031, 3109, 3135 |
| FspBI | CTAG | 8 cut(s) | 57, 185, 198, 971, 1311, 1982, 2954, 3126 |
| GlaI | GCGC | 5 cut(s) | 62, 64, 1091, 1672, 3133 |
| GluI | GCNGC | 8 cut(s) | 675, 1649, 1669, 1987, 2826, 3031, 3109, 3135 |
| GsaI | CCCAGC | 1 cut(s) | 1353 |
| GsuI | CTGGAG | 2 cut(s) | 1129, 1979 |
| HaeIII | GGCC | 7 cut(s) | 1598, 1678, 1686, 1986, 2321, 2366, 2540 |
| HapII | CCGG | 1 cut(s) | 1280 |
| HgaI | GACGC | 2 cut(s) | 2958, 3026 |
| HhaI | GCGC | 5 cut(s) | 63, 65, 1092, 1673, 3134 |
| Hin1I | GRCGYC | 1 cut(s) | 2969 |
| Hin6I | GCGC | 5 cut(s) | 61, 63, 1090, 1671, 3132 |
| HinP1I | GCGC | 5 cut(s) | 61, 63, 1090, 1671, 3132 |
| HincII | GTYRAC | 6 cut(s) | 79, 433, 1057, 2065, 3119, 3152 |
| HindII | GTYRAC | 6 cut(s) | 79, 433, 1057, 2065, 3119, 3152 |
| HindIII | AAGCTT | 1 cut(s) | 2223 |
| HinfI | GANTC | 7 cut(s) | 1795, 1942, 1992, 2444, 2588, 3002, 3023 |
| HpaI | GTTAAC | 2 cut(s) | 79, 2065 |
| HpaII | CCGG | 1 cut(s) | 1280 |
| Hpy99I | CGWCG | 4 cut(s) | 1075, 1456, 3020, 3144 |
| HpyAV | CCTTC | 7 cut(s) | 938, 1039, 1171, 1697, 2309, 2354, 2356 |
| HpyCH4III | ACNGT | 9 cut(s) | 132, 288, 456, 683, 1064, 1381, 1723, 2513, 3083 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 67, 1440, 2318, 2363, 2537, 2792, 2801, 2932, 3255 |
| Hsp92I | GRCGYC | 1 cut(s) | 2969 |
| HspAI | GCGC | 5 cut(s) | 61, 63, 1090, 1671, 3132 |
| KpnI | GGTACC | 1 cut(s) | 423 |
| Ksp22I | TGATCA | 1 cut(s) | 2946 |
| KspAI | GTTAAC | 2 cut(s) | 79, 2065 |
| LmnI | GCTCC | 7 cut(s) | 28, 1110, 1148, 1570, 3255, 3285, 3322 |
| Lsp1109I | GCAGC | 2 cut(s) | 661, 3121 |
| LweI | GCATC | 5 cut(s) | 539, 1918, 2777, 2856, 3119 |
| MaeI | CTAG | 8 cut(s) | 57, 185, 198, 971, 1311, 1982, 2954, 3126 |
| MbiI | CCGCTC | 1 cut(s) | 3030 |
| MflI | RGATCY | 6 cut(s) | 731, 922, 1808, 1839, 1896, 1933 |
| MhlI | GDGCHC | 4 cut(s) | 1436, 2656, 2928, 2987 |
| MlsI | TGGCCA | 2 cut(s) | 1598, 1678 |
| MluNI | TGGCCA | 2 cut(s) | 1598, 1678 |
| MlyI | GAGTC | 2 cut(s) | 1986, 3011 |
| MmeI | TCCRAC | 5 cut(s) | 1284, 1705, 1742, 1830, 3039 |
| Mox20I | TGGCCA | 2 cut(s) | 1598, 1678 |
| MroXI | GAANNNNTTC | 2 cut(s) | 759, 2379 |
| MscI | TGGCCA | 2 cut(s) | 1598, 1678 |
| MslI | CAYNNNNRTG | 4 cut(s) | 86, 1400, 1484, 1604 |
| Msp20I | TGGCCA | 2 cut(s) | 1598, 1678 |
| MspCI | CTTAAG | 1 cut(s) | 1006 |
| MspI | CCGG | 1 cut(s) | 1280 |
| MspR9I | CCNGG | 1 cut(s) | 1997 |
| MvaI | CCWGG | 1 cut(s) | 1997 |
| MvnI | CGCG | 2 cut(s) | 63, 1673 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 67, 1440, 2318, 2363, 2537, 2792, 2801, 2932, 3255 |
| NcoI | CCATGG | 2 cut(s) | 1485, 3318 |
| NlaIV | GGNNCC | 5 cut(s) | 24, 421, 1284, 1348, 3324 |
| NmuCI | GTSAC | 5 cut(s) | 577, 1167, 1319, 1999, 2834 |
| NspV | TTCGAA | 1 cut(s) | 1362 |
| PagI | TCATGA | 1 cut(s) | 3051 |
| PalAI | GGCGCGCC | 1 cut(s) | 61 |
| PauI | GCGCGC | 1 cut(s) | 61 |
| PceI | AGGCCT | 1 cut(s) | 2366 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2966, 3148 |
| PdmI | GAANNNNTTC | 2 cut(s) | 759, 2379 |
| PfeI | GAWTC | 5 cut(s) | 1795, 1942, 2444, 2588, 3023 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 405, 1849, 2175, 3162, 3332 |
| PkrI | GCNGC | 8 cut(s) | 676, 1650, 1670, 1988, 2827, 3032, 3110, 3136 |
| PleI | GAGTC | 2 cut(s) | 1986, 3010 |
| PpsI | GAGTC | 2 cut(s) | 1986, 3010 |
| Ppu21I | YACGTR | 2 cut(s) | 934, 2657 |
| PshBI | ATTAAT | 1 cut(s) | 2633 |
| PsiI | TTATAA | 1 cut(s) | 1130 |
| Psp6I | CCWGG | 1 cut(s) | 1995 |
| PspFI | CCCAGC | 1 cut(s) | 1349 |
| PspGI | CCWGG | 1 cut(s) | 1995 |
| PspN4I | GGNNCC | 5 cut(s) | 24, 421, 1284, 1348, 3324 |
| PspPI | GGNCC | 5 cut(s) | 1346, 1684, 1771, 2320, 2539 |
| PstI | CTGCAG | 1 cut(s) | 679 |
| PsuI | RGATCY | 6 cut(s) | 731, 922, 1808, 1839, 1896, 1933 |
| PteI | GCGCGC | 1 cut(s) | 61 |
| RsaI | GTAC | 7 cut(s) | 421, 458, 787, 892, 1805, 3037, 3178 |
| RsaNI | GTAC | 7 cut(s) | 420, 457, 786, 891, 1804, 3036, 3177 |
| RseI | CAYNNNNRTG | 4 cut(s) | 86, 1400, 1484, 1604 |
| SalI | GTCGAC | 2 cut(s) | 431, 3150 |
| SatI | GCNGC | 8 cut(s) | 675, 1649, 1669, 1987, 2826, 3031, 3109, 3135 |
| Sau96I | GGNCC | 5 cut(s) | 1346, 1684, 1771, 2320, 2539 |
| SchI | GAGTC | 2 cut(s) | 1986, 3011 |
| ScrFI | CCNGG | 1 cut(s) | 1997 |
| SduI | GDGCHC | 4 cut(s) | 1436, 2656, 2928, 2987 |
| SfaNI | GCATC | 5 cut(s) | 539, 1918, 2777, 2856, 3119 |
| SfcI | CTRYAG | 2 cut(s) | 128, 675 |
| SfuI | TTCGAA | 1 cut(s) | 1362 |
| SgsI | GGCGCGCC | 1 cut(s) | 61 |
| SinI | GGWCC | 2 cut(s) | 1346, 1771 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 86, 1400, 1484, 1604 |
| SmlI | CTYRAG | 3 cut(s) | 29, 1006, 2245 |
| SmoI | CTYRAG | 3 cut(s) | 29, 1006, 2245 |
| SseBI | AGGCCT | 1 cut(s) | 2366 |
| SspI | AATATT | 2 cut(s) | 651, 1764 |
| SspMI | CTAG | 8 cut(s) | 57, 185, 198, 971, 1311, 1982, 2954, 3126 |
| StuI | AGGCCT | 1 cut(s) | 2366 |
| StyD4I | CCNGG | 1 cut(s) | 1995 |
| StyI | CCWWGG | 3 cut(s) | 1485, 1593, 3318 |
| TaaI | ACNGT | 9 cut(s) | 132, 288, 456, 683, 1064, 1381, 1723, 2513, 3083 |
| TatI | WGTACW | 4 cut(s) | 456, 785, 890, 3035 |
| TauI | GCSGC | 6 cut(s) | 1651, 1671, 1989, 2828, 3033, 3111 |
| TfiI | GAWTC | 5 cut(s) | 1795, 1942, 2444, 2588, 3023 |
| TscAI | CASTG | 3 cut(s) | 2056, 2718, 3064 |
| TseFI | GTSAC | 5 cut(s) | 577, 1167, 1319, 1999, 2834 |
| TseI | GCWGC | 2 cut(s) | 674, 3134 |
| Tsp45I | GTSAC | 5 cut(s) | 577, 1167, 1319, 1999, 2834 |
| TspGWI | ACGGA | 4 cut(s) | 1111, 1821, 1926, 3092 |
| TspRI | CASTG | 3 cut(s) | 2056, 2718, 3064 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 405, 1849, 2175, 3162, 3332 |
| Vha464I | CTTAAG | 1 cut(s) | 1006 |
| VneI | GTGCAC | 1 cut(s) | 2652 |
| VpaK11BI | GGWCC | 2 cut(s) | 1346, 1771 |
| VspI | ATTAAT | 1 cut(s) | 2633 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2962 |
| XbaI | TCTAGA | 1 cut(s) | 184 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2176, 2426 |
| XmiI | GTMKAC | 3 cut(s) | 432, 2035, 3151 |
| XmnI | GAANNNNTTC | 2 cut(s) | 759, 2379 |
| XspI | CTAG | 8 cut(s) | 57, 185, 198, 971, 1311, 1982, 2954, 3126 |