pycom10g08510

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
11240535 .. 11243281
2747 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g08510.6

Sequence Viewer

Length: 711 bp
ATGTATTCATCTGATTATTTAAATCCAAAAATCAAGTTTTGGAATTCTATAAATAGGAAGCCAAGGCATTCATTTGAAGAGAAAAAGAGAGAGGGAGAAGAAGAAGAGGAAGAAAAGAGAAAGAAAGAAAGAAGGGAATTTACACAAAATCCCGAAGGATCAAGAAAACACTCTTCGTTCTTCGTCAAACCCTCCTTCAAGGTCAAGCCCCAACGGCCCTTGAAGAACTTCCGCCGACTCAAGATCAAGCCCCGACGCAAGCCCCAACGGCCCTTTGGATCAACAACCTCAACAAATCCACACATACACTTAGTCTTCAAGATTAGATTAGGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACAACCTCAAGACATCTGTTCAGTCTTCAAGATCAAGCCCCGACGGCCCTTGAAGAGAAGTTGTTCATCATCCCCGTTCATCCTAAGATCAAGCCCCAACGGCCCTTTGGATCAACAACCTCAACAAATCCACACATCCAATCAGTCTTCAAGATTAGGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACCTTCAAGATCAAGCCCAAAAACCCTCGAAGATCCGTTCATCAACTGTTCATCCCTAAATCAAGCCCCGACGGCCCTTTGGATCAACAGCTCATCCACAAACCTACACCCTACGAAGATAGAATCAGAGGATCAAATTACAAAGAGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

237

Amino Acids

27.49

Weight (kDa)

10.28

Isoelectric Point (pI)

77.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 355, 547
AciI CCGC 3 cut(s) 232, 353, 545
AclWI GGATC 8 cut(s) 166, 286, 344, 483, 536, 584, 647, 696
AcsI RAATTY 2 cut(s) 43, 137
AluBI AGCT 1 cut(s) 648
AluI AGCT 1 cut(s) 648
AlwI GGATC 8 cut(s) 166, 286, 344, 483, 536, 584, 647, 696
AoxI GGCC 7 cut(s) 215, 269, 331, 410, 466, 523, 630
ApoI RAATTY 2 cut(s) 43, 137
Asp700I GAANNNNTTC 2 cut(s) 227, 427
AspS9I GGNCC 7 cut(s) 216, 270, 332, 411, 467, 524, 631
BarI GAAGNNNNNNTAC 2 cut(s) 124, 156
BbsI GAAGAC 3 cut(s) 307, 382, 504
BccI CCATC 2 cut(s) 369, 561
BceAI ACGGC 5 cut(s) 230, 284, 425, 481, 645
BglI GCCNNNNNGGC 5 cut(s) 214, 268, 409, 465, 629
BmgT120I GGNCC 7 cut(s) 216, 270, 332, 411, 467, 524, 631
BpiI GAAGAC 3 cut(s) 307, 382, 504
BpuEI CTTGAG 2 cut(s) 224, 357
BsaJI CCNNGG 1 cut(s) 62
BseDI CCNNGG 1 cut(s) 62
BseGI GGATG 7 cut(s) 357, 434, 444, 500, 549, 608, 650
BshFI GGCC 7 cut(s) 217, 271, 333, 412, 468, 525, 632
BsmI GAATGC 1 cut(s) 67
BsnI GGCC 7 cut(s) 217, 271, 333, 412, 468, 525, 632
BspACI CCGC 3 cut(s) 232, 353, 545
BspANI GGCC 7 cut(s) 217, 271, 333, 412, 468, 525, 632
BspPI GGATC 8 cut(s) 166, 286, 344, 483, 536, 584, 647, 696
BsrBI CCGCTC 2 cut(s) 355, 547
BssECI CCNNGG 1 cut(s) 62
BssT1I CCWWGG 1 cut(s) 62
Bst4CI ACNGT 1 cut(s) 605
Bst6I CTCTTC 4 cut(s) 72, 99, 178, 413
BstC8I GCNNGC 1 cut(s) 260
BstDEI CTNAG 2 cut(s) 310, 449
BstF5I GGATG 7 cut(s) 357, 434, 444, 500, 549, 608, 650
BstMWI GCNNNNNNNGC 5 cut(s) 214, 268, 409, 465, 629
BstV2I GAAGAC 3 cut(s) 307, 382, 504
BstX2I RGATCY 3 cut(s) 349, 541, 589
BstYI RGATCY 3 cut(s) 349, 541, 589
BsuRI GGCC 7 cut(s) 217, 271, 333, 412, 468, 525, 632
BtsCI GGATG 7 cut(s) 357, 434, 444, 500, 549, 608, 650
Cac8I GCNNGC 1 cut(s) 260
Cfr13I GGNCC 7 cut(s) 216, 270, 332, 411, 467, 524, 631
CseI GACGC 1 cut(s) 264
DdeI CTNAG 2 cut(s) 310, 449
DraI TTTAAA 1 cut(s) 21
Eam1104I CTCTTC 4 cut(s) 72, 99, 178, 413
EarI CTCTTC 4 cut(s) 72, 99, 178, 413
EciI GGCGGA 1 cut(s) 221
Eco130I CCWWGG 1 cut(s) 62
EcoRI GAATTC 1 cut(s) 43
EcoT14I CCWWGG 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 62
FaiI YATR 2 cut(s) 50, 305
FokI GGATG 7 cut(s) 344, 421, 431, 487, 536, 595, 637
HaeIII GGCC 7 cut(s) 217, 271, 333, 412, 468, 525, 632
HgaI GACGC 1 cut(s) 264
HinfI GANTC 2 cut(s) 237, 680
Hpy188I TCNGA 2 cut(s) 13, 685
Hpy188III TCNNGA 8 cut(s) 152, 162, 241, 319, 374, 394, 516, 564
Hpy99I CGWCG 3 cut(s) 258, 411, 631
HpyAV CCTTC 4 cut(s) 126, 149, 205, 570
HpyCH4III ACNGT 1 cut(s) 605
HpyF10VI GCNNNNNNNGC 5 cut(s) 214, 268, 409, 465, 629
HpyF3I CTNAG 2 cut(s) 310, 449
MbiI CCGCTC 2 cut(s) 355, 547
MflI RGATCY 3 cut(s) 349, 541, 589
MluCI AATT 3 cut(s) 43, 137, 693
MlyI GAGTC 1 cut(s) 231
MnlI CCTC 8 cut(s) 85, 100, 202, 298, 381, 495, 593, 679
MroXI GAANNNNTTC 2 cut(s) 227, 427
MseI TTAA 1 cut(s) 20
Mva1269I GAATGC 1 cut(s) 67
MwoI GCNNNNNNNGC 5 cut(s) 214, 268, 409, 465, 629
PctI GAATGC 1 cut(s) 67
PdmI GAANNNNTTC 2 cut(s) 227, 427
PfeI GAWTC 1 cut(s) 680
PleI GAGTC 1 cut(s) 231
PpsI GAGTC 1 cut(s) 231
PspPI GGNCC 7 cut(s) 216, 270, 332, 411, 467, 524, 631
PsuI RGATCY 3 cut(s) 349, 541, 589
SaqAI TTAA 1 cut(s) 20
Sau96I GGNCC 7 cut(s) 216, 270, 332, 411, 467, 524, 631
SchI GAGTC 1 cut(s) 231
SetI ASST 7 cut(s) 204, 290, 373, 487, 562, 650, 663
SmiI ATTTAAAT 1 cut(s) 21
SmlI CTYRAG 2 cut(s) 239, 372
SmoI CTYRAG 2 cut(s) 239, 372
Sse9I AATT 3 cut(s) 43, 137, 693
SsiI CCGC 3 cut(s) 232, 353, 545
StyI CCWWGG 1 cut(s) 62
SwaI ATTTAAAT 1 cut(s) 21
TaaI ACNGT 1 cut(s) 605
TaqI TCGA 1 cut(s) 585
TasI AATT 3 cut(s) 43, 137, 693
TfiI GAWTC 1 cut(s) 680
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TspDTI ATGAA 5 cut(s) 60, 420, 433, 586, 597
TspGWI ACGGA 1 cut(s) 582
XapI RAATTY 2 cut(s) 43, 137
XcmI CCANNNNNNNNNTGG 2 cut(s) 272, 469
XmnI GAANNNNTTC 2 cut(s) 227, 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.