pycom09g09450

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
7618079 .. 7619353
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g09450.1

Sequence Viewer

Length: 576 bp
ATGTGGAGACAAGCAACAACTGCATATGCTGATTCAAGAAAGGAAGAAAGAAAGAAAGAAGGGAATTTACATCACACCAAAACCTTGAAGCCTCGAAACTCTAAAGCTCTCAAGCAAATCCCGAAGGATCAAGAAAACACTCTTCGTTCTTCGTCAAATCCTCCTTCAAAGGTCAAGCCCCAACGGCCCTTGAAGAACTTCCACCGACTCAAGATCAAGCCCCGACGGCCCCTTGAAGAAAGTGTTCATCATCCGTTCATCCTAAGATCAAGCCCCAACGGCCCTTTGGATCAACAACCTCAACAAATCCACACATCCAATCGTTCTTCAAGATTAAGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACCTTCAAGATCAAGCCCAAAAGCCCTTGAAGAAATCCATACATCCAATTGTTCTTCAAGATCAAGCCCAAAAGCCCTCGAAGATCCGTTCATCAACTGTTCATCCCTAGATCAAGCCCCAACGGCCCTTTGGATCAACAACTCATCCACAAACCTTCACCCTACGAAGATAGAATCAGAGGATCAAATTACAAAGAGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

192

Amino Acids

21.79

Weight (kDa)

10.13

Isoelectric Point (pI)

77.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 361
AciI CCGC 1 cut(s) 359
AclWI GGATC 6 cut(s) 135, 297, 350, 449, 512, 561
AcsI RAATTY 1 cut(s) 64
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
AlwI GGATC 6 cut(s) 135, 297, 350, 449, 512, 561
AoxI GGCC 4 cut(s) 185, 227, 280, 495
ApoI RAATTY 1 cut(s) 64
Asp700I GAANNNNTTC 2 cut(s) 197, 243
AspS9I GGNCC 4 cut(s) 186, 228, 281, 496
AsuHPI GGTGA 1 cut(s) 521
BarI GAAGNNNNNNTAC 2 cut(s) 51, 83
BccI CCATC 1 cut(s) 375
BceAI ACGGC 4 cut(s) 200, 242, 295, 510
BfaI CTAG 1 cut(s) 479
BglI GCCNNNNNGGC 4 cut(s) 184, 226, 279, 494
BmgT120I GGNCC 4 cut(s) 186, 228, 281, 496
BmiI GGNNCC 1 cut(s) 230
BpuEI CTTGAG 2 cut(s) 95, 194
BseGI GGATG 7 cut(s) 250, 258, 314, 363, 413, 473, 515
BshFI GGCC 4 cut(s) 187, 229, 282, 497
BsnI GGCC 4 cut(s) 187, 229, 282, 497
BspACI CCGC 1 cut(s) 359
BspANI GGCC 4 cut(s) 187, 229, 282, 497
BspLI GGNNCC 1 cut(s) 230
BspPI GGATC 6 cut(s) 135, 297, 350, 449, 512, 561
BsrBI CCGCTC 1 cut(s) 361
Bst4CI ACNGT 1 cut(s) 470
Bst6I CTCTTC 1 cut(s) 147
BstAPI GCANNNNNTGC 1 cut(s) 20
BstDEI CTNAG 1 cut(s) 263
BstF5I GGATG 7 cut(s) 250, 258, 314, 363, 413, 473, 515
BstMWI GCNNNNNNNGC 5 cut(s) 20, 184, 226, 279, 494
BstX2I RGATCY 2 cut(s) 355, 454
BstYI RGATCY 2 cut(s) 355, 454
BsuRI GGCC 4 cut(s) 187, 229, 282, 497
BtsCI GGATG 7 cut(s) 250, 258, 314, 363, 413, 473, 515
Cfr13I GGNCC 4 cut(s) 186, 228, 281, 496
DdeI CTNAG 1 cut(s) 263
Eam1104I CTCTTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 147
FaiI YATR 3 cut(s) 25, 27, 411
FauNDI CATATG 1 cut(s) 25
FokI GGATG 7 cut(s) 237, 245, 301, 350, 400, 460, 502
FspBI CTAG 1 cut(s) 479
HaeIII GGCC 4 cut(s) 187, 229, 282, 497
HinfI GANTC 3 cut(s) 32, 207, 545
HphI GGTGA 1 cut(s) 521
Hpy188I TCNGA 1 cut(s) 550
Hpy188III TCNNGA 7 cut(s) 36, 121, 131, 211, 330, 378, 429
Hpy99I CGWCG 1 cut(s) 228
HpyAV CCTTC 5 cut(s) 53, 118, 174, 384, 536
HpyCH4III ACNGT 1 cut(s) 470
HpyCH4V TGCA 1 cut(s) 23
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 184, 226, 279, 494
HpyF3I CTNAG 1 cut(s) 263
MaeI CTAG 1 cut(s) 479
MbiI CCGCTC 1 cut(s) 361
MfeI CAATTG 1 cut(s) 418
MflI RGATCY 2 cut(s) 355, 454
MluCI AATT 3 cut(s) 64, 418, 558
MlyI GAGTC 1 cut(s) 201
MnlI CCTC 5 cut(s) 102, 171, 309, 458, 544
MroXI GAANNNNTTC 2 cut(s) 197, 243
MseI TTAA 1 cut(s) 335
MunI CAATTG 1 cut(s) 418
MwoI GCNNNNNNNGC 5 cut(s) 20, 184, 226, 279, 494
NdeI CATATG 1 cut(s) 25
NlaIV GGNNCC 1 cut(s) 230
PdmI GAANNNNTTC 2 cut(s) 197, 243
PfeI GAWTC 2 cut(s) 32, 545
PleI GAGTC 1 cut(s) 201
PpsI GAGTC 1 cut(s) 201
PspN4I GGNNCC 1 cut(s) 230
PspPI GGNCC 4 cut(s) 186, 228, 281, 496
PsuI RGATCY 2 cut(s) 355, 454
SaqAI TTAA 1 cut(s) 335
Sau96I GGNCC 4 cut(s) 186, 228, 281, 496
SchI GAGTC 1 cut(s) 201
SetI ASST 6 cut(s) 86, 109, 174, 301, 376, 528
SmlI CTYRAG 2 cut(s) 110, 209
SmoI CTYRAG 2 cut(s) 110, 209
Sse9I AATT 3 cut(s) 64, 418, 558
SsiI CCGC 1 cut(s) 359
SspMI CTAG 1 cut(s) 479
TaaI ACNGT 1 cut(s) 470
TaqI TCGA 2 cut(s) 94, 450
TasI AATT 3 cut(s) 64, 418, 558
TfiI GAWTC 2 cut(s) 32, 545
Tru1I TTAA 1 cut(s) 335
Tru9I TTAA 1 cut(s) 335
TspDTI ATGAA 4 cut(s) 236, 247, 451, 462
TspGWI ACGGA 2 cut(s) 243, 447
XapI RAATTY 1 cut(s) 64
XcmI CCANNNNNNNNNTGG 2 cut(s) 283, 498
XmnI GAANNNNTTC 2 cut(s) 197, 243
XspI CTAG 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.