pycom07g06730

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
6033034 .. 6033590
557 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g06730.1

Sequence Viewer

Length: 474 bp
ATGTATTCATCTGATTATTTAAATCCAAAAATCAAGTTTTGGAATTCTATAAATAGGAAGCCAAGGCATTCATTTGAGGAAGAAAAAAAAAAGGAAGGAGGAAAGAAAGAAAGGAAGAAGAGAAAGAAAGAAGGGAATTTACATCACACCAAAACCTTGAAGCCTCGAAACTCTAAAGTTCTCAAGCAAATCCCGAAGGATCAAGAAAACACTCTTCGTTCTTCGTCAAATCCTCCTTCAAAGGTCAAGCCCCAACGGCCCTTGAAGAACTTCCACCGACTCAAGATCAAGCCCCGACGACCCCTTGAAGAAAGTGTTCATCATCCGTTCATCCTAAGATCAAGCCCCAACGGCCCTTTGGATCAACAACCTCAACAAATCCACACATCCAATCGTTCTTCAAGATTAAGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACCTTCAAGATCAAGCCCAAAAGCCCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

158

Amino Acids

18.36

Weight (kDa)

10.77

Isoelectric Point (pI)

68.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 433
AciI CCGC 1 cut(s) 431
AclWI GGATC 3 cut(s) 207, 369, 422
AcsI RAATTY 2 cut(s) 43, 136
AgsI TTSAA 7 cut(s) 160, 240, 265, 308, 402, 425, 450
AlwI GGATC 3 cut(s) 207, 369, 422
AoxI GGCC 2 cut(s) 257, 352
ApoI RAATTY 2 cut(s) 43, 136
Asp700I GAANNNNTTC 2 cut(s) 269, 315
AspS9I GGNCC 2 cut(s) 258, 353
BarI GAAGNNNNNNTAC 2 cut(s) 123, 155
BccI CCATC 1 cut(s) 447
BceAI ACGGC 2 cut(s) 272, 367
BglI GCCNNNNNGGC 2 cut(s) 256, 351
BmgT120I GGNCC 2 cut(s) 258, 353
BpuEI CTTGAG 2 cut(s) 167, 266
BsaJI CCNNGG 1 cut(s) 62
BseDI CCNNGG 1 cut(s) 62
BseGI GGATG 4 cut(s) 322, 330, 386, 435
BshFI GGCC 2 cut(s) 259, 354
BsmI GAATGC 1 cut(s) 67
BsnI GGCC 2 cut(s) 259, 354
Bsp143I GATC 6 cut(s) 199, 285, 338, 361, 427, 452
BspACI CCGC 1 cut(s) 431
BspANI GGCC 2 cut(s) 259, 354
BspPI GGATC 3 cut(s) 207, 369, 422
BsrBI CCGCTC 1 cut(s) 433
BssECI CCNNGG 1 cut(s) 62
BssMI GATC 6 cut(s) 199, 285, 338, 361, 427, 452
BssT1I CCWWGG 1 cut(s) 62
Bst6I CTCTTC 2 cut(s) 113, 219
BstDEI CTNAG 1 cut(s) 335
BstF5I GGATG 4 cut(s) 322, 330, 386, 435
BstKTI GATC 6 cut(s) 202, 288, 341, 364, 430, 455
BstMBI GATC 6 cut(s) 199, 285, 338, 361, 427, 452
BstMWI GCNNNNNNNGC 2 cut(s) 256, 351
BstX2I RGATCY 1 cut(s) 427
BstYI RGATCY 1 cut(s) 427
BsuRI GGCC 2 cut(s) 259, 354
BtsCI GGATG 4 cut(s) 322, 330, 386, 435
Cfr13I GGNCC 2 cut(s) 258, 353
DdeI CTNAG 1 cut(s) 335
DpnI GATC 6 cut(s) 201, 287, 340, 363, 429, 454
DpnII GATC 6 cut(s) 199, 285, 338, 361, 427, 452
DraI TTTAAA 1 cut(s) 21
Eam1104I CTCTTC 2 cut(s) 113, 219
EarI CTCTTC 2 cut(s) 113, 219
Eco130I CCWWGG 1 cut(s) 62
EcoRI GAATTC 1 cut(s) 43
EcoT14I CCWWGG 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 62
FaiI YATR 1 cut(s) 50
FokI GGATG 4 cut(s) 309, 317, 373, 422
HaeIII GGCC 2 cut(s) 259, 354
HinfI GANTC 1 cut(s) 279
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 5 cut(s) 193, 203, 283, 402, 450
Hpy99I CGWCG 1 cut(s) 300
HpyAV CCTTC 5 cut(s) 89, 125, 190, 246, 456
HpyF10VI GCNNNNNNNGC 2 cut(s) 256, 351
HpyF3I CTNAG 1 cut(s) 335
Kzo9I GATC 6 cut(s) 199, 285, 338, 361, 427, 452
MalI GATC 6 cut(s) 201, 287, 340, 363, 429, 454
MbiI CCGCTC 1 cut(s) 433
MboI GATC 6 cut(s) 199, 285, 338, 361, 427, 452
MboII GAAGA 9 cut(s) 92, 127, 130, 206, 213, 277, 320, 390, 437
MflI RGATCY 1 cut(s) 427
MluCI AATT 2 cut(s) 43, 136
MlyI GAGTC 1 cut(s) 273
MnlI CCTC 5 cut(s) 70, 92, 174, 243, 381
MroXI GAANNNNTTC 2 cut(s) 269, 315
MseI TTAA 2 cut(s) 20, 407
Mva1269I GAATGC 1 cut(s) 67
MwoI GCNNNNNNNGC 2 cut(s) 256, 351
NdeII GATC 6 cut(s) 199, 285, 338, 361, 427, 452
PctI GAATGC 1 cut(s) 67
PdmI GAANNNNTTC 2 cut(s) 269, 315
PleI GAGTC 1 cut(s) 273
PpsI GAGTC 1 cut(s) 273
PspPI GGNCC 2 cut(s) 258, 353
PsuI RGATCY 1 cut(s) 427
SaqAI TTAA 2 cut(s) 20, 407
Sau3AI GATC 6 cut(s) 199, 285, 338, 361, 427, 452
Sau96I GGNCC 2 cut(s) 258, 353
SchI GAGTC 1 cut(s) 273
SetI ASST 4 cut(s) 158, 246, 373, 448
SmiI ATTTAAAT 1 cut(s) 21
SmlI CTYRAG 2 cut(s) 182, 281
SmoI CTYRAG 2 cut(s) 182, 281
Sse9I AATT 2 cut(s) 43, 136
SsiI CCGC 1 cut(s) 431
StyI CCWWGG 1 cut(s) 62
SwaI ATTTAAAT 1 cut(s) 21
TaqI TCGA 1 cut(s) 166
TasI AATT 2 cut(s) 43, 136
Tru1I TTAA 2 cut(s) 20, 407
Tru9I TTAA 2 cut(s) 20, 407
TspDTI ATGAA 3 cut(s) 60, 308, 319
TspGWI ACGGA 1 cut(s) 315
XapI RAATTY 2 cut(s) 43, 136
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XmnI GAANNNNTTC 2 cut(s) 269, 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.