pycom14g09590

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
11556099 .. 11556678
580 bp
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UTR
Exon/CDS
Intron
pycom14g09590.1

Sequence Viewer

Length: 501 bp
ATGAATTGGAAAAGTCATCAAATAGGACACGAGGCCAAGGCATTCATTTTGAAAAAAAAGGAAAAAAAGAGAAGAAAGAAAGAAGGGAATTTACATCACACCAAAACCTTGAAGCCTCGAAACTCTAAAGCTCTCAAGCAAATCCCGAAGGATCGAGAAAACACTCTTCGTTCTTCGTCAAATCCTCCTTCAAAGGTCAAGCCCCAACGGCCCTTGAAGAACTTCCACCGACTCAAGATCAAGCCCCGACGGCCCCTTGAAGAAAGTGTTCATCATCCGTTCATCCTAAGATCAAGCCCCAACGGCCCTTTGGATCAACAACCTCAACAAATCCACACATCCAATCGTTCTTCAAGATTAAGCCCAAAAGCCCTTGAAGATCCGCTCATCCATCAACCTTCAAGATCAAGCCCAAAAGCCCTTGAAGAAATCCATACATCCAGTCTTCAAGATCAAGCCCAAAAGCCCTCGAAGATCCGTTCATCAACTGTTCATCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

167

Amino Acids

19.16

Weight (kDa)

11.12

Isoelectric Point (pI)

71.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 385
AciI CCGC 1 cut(s) 383
AclWI GGATC 4 cut(s) 159, 321, 374, 469
AcsI RAATTY 1 cut(s) 88
AluBI AGCT 1 cut(s) 131
AluI AGCT 1 cut(s) 131
AlwI GGATC 4 cut(s) 159, 321, 374, 469
AoxI GGCC 4 cut(s) 33, 209, 251, 304
ApoI RAATTY 1 cut(s) 88
Asp700I GAANNNNTTC 2 cut(s) 221, 267
AspS9I GGNCC 3 cut(s) 210, 252, 305
BarI GAAGNNNNNNTAC 2 cut(s) 75, 107
BauI CACGAG 1 cut(s) 29
BbsI GAAGAC 1 cut(s) 437
BccI CCATC 1 cut(s) 399
BceAI ACGGC 3 cut(s) 224, 266, 319
BfaI CTAG 1 cut(s) 499
BglI GCCNNNNNGGC 3 cut(s) 208, 250, 303
BmgT120I GGNCC 3 cut(s) 210, 252, 305
BmiI GGNNCC 1 cut(s) 254
BpiI GAAGAC 1 cut(s) 437
BpuEI CTTGAG 2 cut(s) 119, 218
BsaJI CCNNGG 1 cut(s) 36
Bse1I ACTGG 1 cut(s) 441
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 6 cut(s) 274, 282, 338, 387, 437, 493
BseNI ACTGG 1 cut(s) 441
BshFI GGCC 4 cut(s) 35, 211, 253, 306
BsmI GAATGC 1 cut(s) 41
BsnI GGCC 4 cut(s) 35, 211, 253, 306
Bsp143I GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
BspACI CCGC 1 cut(s) 383
BspANI GGCC 4 cut(s) 35, 211, 253, 306
BspLI GGNNCC 1 cut(s) 254
BspPI GGATC 4 cut(s) 159, 321, 374, 469
BsrBI CCGCTC 1 cut(s) 385
BsrI ACTGG 1 cut(s) 441
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
BssSI CACGAG 1 cut(s) 29
BssT1I CCWWGG 1 cut(s) 36
Bst2BI CACGAG 1 cut(s) 29
Bst4CI ACNGT 1 cut(s) 490
Bst6I CTCTTC 1 cut(s) 171
BstDEI CTNAG 1 cut(s) 287
BstF5I GGATG 6 cut(s) 274, 282, 338, 387, 437, 493
BstKTI GATC 8 cut(s) 154, 240, 293, 316, 382, 407, 454, 477
BstMBI GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
BstMWI GCNNNNNNNGC 3 cut(s) 208, 250, 303
BstV2I GAAGAC 1 cut(s) 437
BstX2I RGATCY 2 cut(s) 379, 474
BstYI RGATCY 2 cut(s) 379, 474
BsuRI GGCC 4 cut(s) 35, 211, 253, 306
BtsCI GGATG 6 cut(s) 274, 282, 338, 387, 437, 493
Cfr13I GGNCC 3 cut(s) 210, 252, 305
DdeI CTNAG 1 cut(s) 287
DpnI GATC 8 cut(s) 153, 239, 292, 315, 381, 406, 453, 476
DpnII GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
Eam1104I CTCTTC 1 cut(s) 171
EarI CTCTTC 1 cut(s) 171
Eco130I CCWWGG 1 cut(s) 36
EcoT14I CCWWGG 1 cut(s) 36
ErhI CCWWGG 1 cut(s) 36
FaiI YATR 1 cut(s) 435
FokI GGATG 6 cut(s) 261, 269, 325, 374, 424, 480
FspBI CTAG 1 cut(s) 499
HaeIII GGCC 4 cut(s) 35, 211, 253, 306
HinfI GANTC 1 cut(s) 231
Hpy188III TCNNGA 6 cut(s) 145, 155, 235, 354, 402, 449
Hpy99I CGWCG 1 cut(s) 252
HpyAV CCTTC 4 cut(s) 77, 142, 198, 408
HpyCH4III ACNGT 1 cut(s) 490
HpyF10VI GCNNNNNNNGC 3 cut(s) 208, 250, 303
HpyF3I CTNAG 1 cut(s) 287
Kzo9I GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
LpnPI CCDG 1 cut(s) 454
MaeI CTAG 1 cut(s) 499
MalI GATC 8 cut(s) 153, 239, 292, 315, 381, 406, 453, 476
MbiI CCGCTC 1 cut(s) 385
MboI GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
MflI RGATCY 2 cut(s) 379, 474
MluCI AATT 2 cut(s) 4, 88
MlyI GAGTC 1 cut(s) 225
MnlI CCTC 5 cut(s) 25, 126, 195, 333, 478
MroXI GAANNNNTTC 2 cut(s) 221, 267
MseI TTAA 1 cut(s) 359
Mva1269I GAATGC 1 cut(s) 41
MwoI GCNNNNNNNGC 3 cut(s) 208, 250, 303
NdeII GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
NlaIV GGNNCC 1 cut(s) 254
PctI GAATGC 1 cut(s) 41
PdmI GAANNNNTTC 2 cut(s) 221, 267
PleI GAGTC 1 cut(s) 225
PpsI GAGTC 1 cut(s) 225
PspN4I GGNNCC 1 cut(s) 254
PspPI GGNCC 3 cut(s) 210, 252, 305
PsuI RGATCY 2 cut(s) 379, 474
SaqAI TTAA 1 cut(s) 359
Sau3AI GATC 8 cut(s) 151, 237, 290, 313, 379, 404, 451, 474
Sau96I GGNCC 3 cut(s) 210, 252, 305
SchI GAGTC 1 cut(s) 225
SetI ASST 5 cut(s) 110, 133, 198, 325, 400
SmlI CTYRAG 2 cut(s) 134, 233
SmoI CTYRAG 2 cut(s) 134, 233
Sse9I AATT 2 cut(s) 4, 88
SsiI CCGC 1 cut(s) 383
SspMI CTAG 1 cut(s) 499
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 1 cut(s) 490
TaqI TCGA 3 cut(s) 118, 154, 470
TasI AATT 2 cut(s) 4, 88
Tru1I TTAA 1 cut(s) 359
Tru9I TTAA 1 cut(s) 359
TspDTI ATGAA 6 cut(s) 17, 34, 260, 271, 471, 482
TspGWI ACGGA 2 cut(s) 267, 467
XapI RAATTY 1 cut(s) 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 307
XmnI GAANNNNTTC 2 cut(s) 221, 267
XspI CTAG 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.