pycom01g05150

Belongs to the MICOS complex subunit Mic60 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
4723334 .. 4728404
5071 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g05150.6

Sequence Viewer

Length: 1842 bp
ATGTTGCGAAGGTCAATTCTGCAGATTGCGTCTCGTCGTGGACTTAGAAGAAGGATTCCGAGGCCGATTACAAGGGAATTCTCCGCCGCAGCCCCCAAAACTGCTTCCCACCACCCTGGCGATGCAGCCAATCCGCCGCCGCCGGTAAACGGCGGTTCCAGCGCCAAAATTTTCCTCGGAAGCGCTGCCGTTGGTGCTGGGCTTGTGGCAGCTTACAAAACCGGGTATCTAGACCCACTTTTTGGTGCCAAAGAGAAGAGTGATTCGGTTAAGGATGCCGCCATTGGTTTCGAGGATCACAAACATGTAGAAGAAGAAAAACATGATGAAGAAAGAGCTGGCATTGCCGAGGAGAAGGTCGAAACGCGTTCGGATGTTCCCAATGTTGAGGGTTTGAGTGGAAGCGATGGCGAAAACCCGCAGTCTCAGGTGGATGAGGATAATAAAGCTGAGAGTGACATCACAAGTGAGAAAGGTTTGCCCGAGCATTCCCAAAATCTAAATCTTGGGTCATCATCTGAAGGGAATGTAGACGTGAAGAGTGCAGAGGAAAAAACTAGTGTGGAGATAAATGAGGCGCCCGTAGTTTCCCAGACTAGTGCAGATCAGCAAGAGAACGAGGCGAAAACACCGCCACCTCAACCGGATATTGTACAAGACAAGGCAGAGGTTGCATTTGGTATTGATGAAGAGCCATCGGGTTCTCTCCTCAAGGCATATCATCTGAAGGATGAGGCCGATGAAAGCATTGAAATTGCTAATAGGGAGGATGGTAATGAATACAATAACTTTCCTAATGAAAAAGAGGCTCCTGATGCAATCGAAGCGCTAAATGATGCGTACATATCTAAAGATGGAAAGTTAGTTCTCGACTTCTTACAAGCCATTCATACTGCTGAGAAAAGGCAAGCAGAGTTAGATGCTCGTGTTTTTTCAGAAGAAAAGAGAATGTTAAAGGAGAAGTATGAAAAGAAACTAAAGGATGCTGCGGCCAGGGAACTGATGCTTGCAGAAGAGACAGCAATGCTAGACAAGGAATTAAAGAGAGAGAGGGCAAAAGCAGCTGCTGCACTCAAGTCGCTTCAAGAAAAGCTTGAAGAGAAATATAAGACAGAACTTGAGCACAAGGAAAGTGAAGCTGAAATGAAGTTAAAAAAGGTCGAGGAATTAGCAAAAGCGGAACTGGCAGCAACAATTGCAAGAGAGAAGGCATCCCAAATTGAGAAAATGGCAGAAGCAAACCTTCATATAAATGCCTTGTGTGTGGCATTCTATGCAAGATCTGAAGAAGCTCGTCAGACTCACTCTGCTCACAAATTTGCTTTGGGAGCACTTGCACTAGATGATGCACTTTCAAAAGGATTGCCAATTGAAAGAGAAGTAGAGGCTTTGCACACTTACCTTGAAGGCATTGATAAAGATTCAATCTTGGATGTGGTCCTATCATCTCTTCCTGAAGAAACACGAAGGAATGGCACAGATACCTTATTGCAATTGAATCAGAAGTTTGATGCCTTGAAAGGTACAGTACCGCACCTCAGCTTAATCCCTCTTGGTGGTGGTGGCATTTTGGCACATTCCTTGGCACACATTGCATCCTGGTTGAAGGTGAAGGAAGTTGACCACTCAGGGGACGGAATTGAGTCCATCATCAACAAAGTGGAGCACTACCTTGCTGAAGGAAAGATAGCCGAAGCAGCAGAGGCACTTGAAGAAGGAGTGAAGGGCACCCAAGCAATGGAAGTAGTGAGTGAATGGGTGAAGCGTGCTAGGAATAGGGCTATCACAGACCAAGCTCTAACGCTTCTCCAATCATATGCTACTTCTATCAGCGTTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

614

Amino Acids

66.97

Weight (kDa)

5.05

Isoelectric Point (pI)

49.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011414)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 245, 577, 1727
AccB7I CCANNNNNTGG 2 cut(s) 242, 1738
AccI GTMKAC 1 cut(s) 531
AccII CGCG 1 cut(s) 367
AclWI GGATC 1 cut(s) 303
AcoI YGGCCR 1 cut(s) 990
AcsI RAATTY 3 cut(s) 77, 168, 1316
AcuI CTGAAG 5 cut(s) 540, 746, 1305, 1476, 1698
AcyI GRCGYC 1 cut(s) 578
AfaI GTAC 4 cut(s) 654, 842, 1525, 1530
AfeI AGCGCT 2 cut(s) 184, 828
AfiI CCNNNNNNNGG 5 cut(s) 149, 242, 1556, 1630, 1738
AflIII ACRYGT 2 cut(s) 304, 365
AhlI ACTAGT 2 cut(s) 557, 596
AjiI CACGTC 1 cut(s) 535
AjnI CCWGG 3 cut(s) 115, 992, 1598
AloI GAACNNNNNNTCC 2 cut(s) 849, 881
AluBI AGCT 9 cut(s) 212, 338, 449, 1064, 1093, 1139, 1292, 1542, 1796
AluI AGCT 9 cut(s) 212, 338, 449, 1064, 1093, 1139, 1292, 1542, 1796
Alw21I GWGCWC 3 cut(s) 1125, 1333, 1668
Alw26I GTCTC 3 cut(s) 36, 429, 1010
AlwI GGATC 1 cut(s) 303
AlwNI CAGNNNCTG 1 cut(s) 1067
Ama87I CYCGRG 1 cut(s) 482
Aor51HI AGCGCT 2 cut(s) 184, 828
AoxI GGCC 3 cut(s) 62, 735, 990
ApoI RAATTY 3 cut(s) 77, 168, 1316
ArsI GACNNNNNNTTYG 2 cut(s) 224, 256
AspLEI GCGC 4 cut(s) 164, 185, 580, 829
AspS9I GGNCC 1 cut(s) 1438
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 2 cut(s) 1621, 1771
AvaI CYCGRG 1 cut(s) 482
AvaII GGWCC 1 cut(s) 1438
BaeGI GKGCMC 1 cut(s) 1730
BanI GGYRCC 3 cut(s) 245, 577, 1727
BauI CACGAG 1 cut(s) 924
Bbv12I GWGCWC 3 cut(s) 1125, 1333, 1668
BbvCI CCTCAGC 1 cut(s) 1538
BccI CCATC 5 cut(s) 401, 703, 764, 848, 1655
BceAI ACGGC 2 cut(s) 166, 173
BcgI CGANNNNNNTGC 2 cut(s) 1059, 1093
BciT130I CCWGG 3 cut(s) 117, 994, 1600
BcnI CCSGG 1 cut(s) 223
BcoDI GTCTC 3 cut(s) 36, 429, 1010
BcuI ACTAGT 2 cut(s) 557, 596
BfaI CTAG 6 cut(s) 230, 558, 597, 1028, 1340, 1770
BfmI CTRYAG 1 cut(s) 20
BfoI RGCGCY 4 cut(s) 165, 186, 581, 830
BglII AGATCT 1 cut(s) 1280
Bme1390I CCNGG 4 cut(s) 117, 223, 994, 1600
Bme18I GGWCC 1 cut(s) 1438
BmeT110I CYCGRG 1 cut(s) 482
BmgBI CACGTC 1 cut(s) 535
BmgT120I GGNCC 1 cut(s) 1438
BmiI GGNNCC 5 cut(s) 157, 247, 579, 810, 1729
BmrFI CCNGG 4 cut(s) 117, 223, 994, 1600
Bpu10I CCTNAGC 1 cut(s) 1538
BpuEI CTTGAG 3 cut(s) 695, 1058, 1139
BpuMI CCSGG 1 cut(s) 223
BsaHI GRCGYC 1 cut(s) 578
BsaJI CCNNGG 6 cut(s) 59, 115, 175, 348, 993, 1581
BsaWI WCCGGW 1 cut(s) 643
Bsc4I CCNNNNNNNGG 5 cut(s) 149, 242, 1556, 1630, 1738
Bse118I RCCGGY 1 cut(s) 142
Bse1I ACTGG 1 cut(s) 1188
Bse3DI GCAATG 4 cut(s) 342, 1029, 1590, 1743
BseBI CCWGG 3 cut(s) 117, 994, 1600
BseDI CCNNGG 6 cut(s) 59, 115, 175, 348, 993, 1581
BseGI GGATG 9 cut(s) 280, 379, 439, 736, 775, 988, 1211, 1438, 1595
BseLI CCNNNNNNNGG 5 cut(s) 149, 242, 1556, 1630, 1738
BseMI GCAATG 4 cut(s) 342, 1029, 1590, 1743
BseMII CTCAG 5 cut(s) 440, 441, 888, 1552, 1641
BseNI ACTGG 1 cut(s) 1188
BseRI GAGGAG 2 cut(s) 365, 698
BseSI GKGCMC 1 cut(s) 1730
BseYI CCCAGC 1 cut(s) 197
BsgI GTGCAG 3 cut(s) 564, 621, 1053
Bsh1236I CGCG 1 cut(s) 367
BshFI GGCC 3 cut(s) 64, 737, 992
BshNI GGYRCC 3 cut(s) 245, 577, 1727
BsiHKAI GWGCWC 3 cut(s) 1125, 1333, 1668
BsiHKCI CYCGRG 1 cut(s) 482
BsiSI CCGG 3 cut(s) 143, 222, 644
BslFI GGGAC 1 cut(s) 1646
BslI CCNNNNNNNGG 5 cut(s) 149, 242, 1556, 1630, 1738
BsmAI GTCTC 3 cut(s) 36, 429, 1010
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 1 cut(s) 1646
BsmI GAATGC 2 cut(s) 487, 1268
BsnI GGCC 3 cut(s) 64, 737, 992
BsoBI CYCGRG 1 cut(s) 482
Bsp1286I GDGCHC 4 cut(s) 1125, 1333, 1668, 1730
Bsp1407I TGTACA 1 cut(s) 652
Bsp143I GATC 3 cut(s) 295, 604, 1280
BspANI GGCC 3 cut(s) 64, 737, 992
BspCNI CTCAG 5 cut(s) 439, 442, 889, 1551, 1640
BspFNI CGCG 1 cut(s) 367
BspLI GGNNCC 5 cut(s) 157, 247, 579, 810, 1729
BspMAI CTGCAG 1 cut(s) 24
BspPI GGATC 1 cut(s) 303
BspQI GCTCTTC 1 cut(s) 684
BspT107I GGYRCC 3 cut(s) 245, 577, 1727
BsrDI GCAATG 4 cut(s) 342, 1029, 1590, 1743
BsrFI RCCGGY 1 cut(s) 142
BsrGI TGTACA 1 cut(s) 652
BsrI ACTGG 1 cut(s) 1188
BssAI RCCGGY 1 cut(s) 142
BssECI CCNNGG 6 cut(s) 59, 115, 175, 348, 993, 1581
BssMI GATC 3 cut(s) 295, 604, 1280
BssNI GRCGYC 1 cut(s) 578
BssSI CACGAG 1 cut(s) 924
BssT1I CCWWGG 1 cut(s) 1581
Bst2BI CACGAG 1 cut(s) 924
Bst2UI CCWGG 3 cut(s) 117, 994, 1600
Bst4CI ACNGT 1 cut(s) 1528
Bst6I CTCTTC 6 cut(s) 251, 533, 684, 1008, 1092, 1455
BstACI GRCGYC 1 cut(s) 578
BstAPI GCANNNNNTGC 5 cut(s) 671, 1067, 1196, 1274, 1592
BstAUI TGTACA 1 cut(s) 652
BstC8I GCNNGC 4 cut(s) 340, 909, 1008, 1767
BstDEI CTNAG 6 cut(s) 44, 426, 450, 897, 1538, 1627
BstF5I GGATG 9 cut(s) 280, 379, 439, 736, 775, 988, 1211, 1438, 1595
BstFNI CGCG 1 cut(s) 367
BstH2I RGCGCY 4 cut(s) 165, 186, 581, 830
BstHHI GCGC 4 cut(s) 164, 185, 580, 829
BstKTI GATC 3 cut(s) 298, 607, 1283
BstMAI GTCTC 3 cut(s) 36, 429, 1010
BstMBI GATC 3 cut(s) 295, 604, 1280
BstNI CCWGG 3 cut(s) 117, 994, 1600
BstNSI RCATGY 1 cut(s) 308
BstSCI CCNGG 4 cut(s) 115, 221, 992, 1598
BstSFI CTRYAG 1 cut(s) 20
BstSLI GKGCMC 1 cut(s) 1730
BstUI CGCG 1 cut(s) 367
BstX2I RGATCY 1 cut(s) 1280
BstXI CCANNNNNNTGG 1 cut(s) 116
BstYI RGATCY 1 cut(s) 1280
BsuRI GGCC 3 cut(s) 64, 737, 992
BtgZI GCGATG 2 cut(s) 135, 420
BtrI CACGTC 1 cut(s) 535
BtsCI GGATG 9 cut(s) 280, 379, 439, 736, 775, 988, 1211, 1438, 1595
Cac8I GCNNGC 4 cut(s) 340, 909, 1008, 1767
CaiI CAGNNNCTG 1 cut(s) 1067
CfoI GCGC 4 cut(s) 164, 185, 580, 829
Cfr10I RCCGGY 1 cut(s) 142
Cfr13I GGNCC 1 cut(s) 1438
CseI GACGC 1 cut(s) 18
Csp6I GTAC 4 cut(s) 653, 841, 1524, 1529
CviAII CATG 2 cut(s) 305, 323
CviQI GTAC 4 cut(s) 653, 841, 1524, 1529
DdeI CTNAG 6 cut(s) 44, 426, 450, 897, 1538, 1627
DinI GGCGCC 1 cut(s) 579
DpnI GATC 3 cut(s) 297, 606, 1282
DpnII GATC 3 cut(s) 295, 604, 1280
EaeI YGGCCR 1 cut(s) 990
Eam1104I CTCTTC 6 cut(s) 251, 533, 684, 1008, 1092, 1455
EarI CTCTTC 6 cut(s) 251, 533, 684, 1008, 1092, 1455
EciI GGCGGA 2 cut(s) 73, 123
Eco130I CCWWGG 1 cut(s) 1581
Eco47I GGWCC 1 cut(s) 1438
Eco47III AGCGCT 2 cut(s) 184, 828
Eco57I CTGAAG 5 cut(s) 540, 746, 1305, 1476, 1698
Eco88I CYCGRG 1 cut(s) 482
EcoRI GAATTC 1 cut(s) 77
EcoRII CCWGG 3 cut(s) 115, 992, 1598
EcoT14I CCWWGG 1 cut(s) 1581
EgeI GGCGCC 1 cut(s) 579
EheI GGCGCC 1 cut(s) 579
ErhI CCWWGG 1 cut(s) 1581
Esp3I CGTCTC 1 cut(s) 36
FaeI CATG 2 cut(s) 308, 326
FalI AAGNNNNNCTT 4 cut(s) 1077, 1109, 1227, 1259
FaqI GGGAC 1 cut(s) 1646
FatI CATG 2 cut(s) 304, 322
FauI CCCGC 1 cut(s) 426
FauNDI CATATG 1 cut(s) 1816
FblI GTMKAC 1 cut(s) 531
FokI GGATG 9 cut(s) 287, 386, 446, 743, 782, 995, 1198, 1445, 1582
FspBI CTAG 6 cut(s) 230, 558, 597, 1028, 1340, 1770
GlaI GCGC 4 cut(s) 163, 184, 579, 828
GsaI CCCAGC 1 cut(s) 201
HaeII RGCGCY 4 cut(s) 165, 186, 581, 830
HaeIII GGCC 3 cut(s) 64, 737, 992
HapII CCGG 3 cut(s) 143, 222, 644
HgaI GACGC 1 cut(s) 18
HhaI GCGC 4 cut(s) 164, 185, 580, 829
Hin1I GRCGYC 1 cut(s) 578
Hin1II CATG 2 cut(s) 308, 326
Hin6I GCGC 4 cut(s) 162, 183, 578, 827
HinP1I GCGC 4 cut(s) 162, 183, 578, 827
HincII GTYRAC 1 cut(s) 1621
HindII GTYRAC 1 cut(s) 1621
HindIII AAGCTT 1 cut(s) 1091
HinfI GANTC 6 cut(s) 55, 263, 1300, 1421, 1498, 1643
HpaII CCGG 3 cut(s) 143, 222, 644
HphI GGTGA 2 cut(s) 1621, 1771
Hpy166II GTNNAC 4 cut(s) 41, 148, 532, 1621
Hpy188I TCNGA 9 cut(s) 60, 179, 373, 520, 726, 937, 1285, 1299, 1503
Hpy188III TCNNGA 5 cut(s) 230, 812, 869, 1085, 1454
Hpy8I GTNNAC 4 cut(s) 41, 148, 532, 1621
Hpy99I CGWCG 1 cut(s) 39
HpyCH4III ACNGT 1 cut(s) 1528
HpyCH4IV ACGT 1 cut(s) 534
HpyF3I CTNAG 6 cut(s) 44, 426, 450, 897, 1538, 1627
HpySE526I ACGT 1 cut(s) 534
Hsp92I GRCGYC 1 cut(s) 578
Hsp92II CATG 2 cut(s) 308, 326
HspAI GCGC 4 cut(s) 162, 183, 578, 827
KasI GGCGCC 1 cut(s) 577
Kzo9I GATC 3 cut(s) 295, 604, 1280
LguI GCTCTTC 1 cut(s) 684
LmnI GCTCC 3 cut(s) 814, 1328, 1663
MaeI CTAG 6 cut(s) 230, 558, 597, 1028, 1340, 1770
MaeII ACGT 1 cut(s) 534
MaeIII GTNAC 2 cut(s) 455, 1834
MalI GATC 3 cut(s) 297, 606, 1282
MboI GATC 3 cut(s) 295, 604, 1280
MfeI CAATTG 3 cut(s) 1194, 1368, 1493
MflI RGATCY 1 cut(s) 1280
MhlI GDGCHC 4 cut(s) 1125, 1333, 1668, 1730
MluI ACGCGT 1 cut(s) 365
Mly113I GGCGCC 1 cut(s) 578
MlyI GAGTC 2 cut(s) 1294, 1652
MseI TTAA 5 cut(s) 270, 953, 1040, 1151, 1544
MslI CAYNNNNRTG 2 cut(s) 303, 1251
MspA1I CMGCKG 1 cut(s) 1064
MspI CCGG 3 cut(s) 143, 222, 644
MspR9I CCNGG 4 cut(s) 117, 223, 994, 1600
MunI CAATTG 3 cut(s) 1194, 1368, 1493
Mva1269I GAATGC 2 cut(s) 487, 1268
MvaI CCWGG 3 cut(s) 117, 994, 1600
MvnI CGCG 1 cut(s) 367
NarI GGCGCC 1 cut(s) 578
NciI CCSGG 1 cut(s) 223
NdeI CATATG 1 cut(s) 1816
NdeII GATC 3 cut(s) 295, 604, 1280
NlaIII CATG 2 cut(s) 308, 326
NlaIV GGNNCC 5 cut(s) 157, 247, 579, 810, 1729
NmeAIII GCCGAG 1 cut(s) 373
NmuCI GTSAC 1 cut(s) 455
NspI RCATGY 1 cut(s) 308
PciI ACATGT 1 cut(s) 304
PciSI GCTCTTC 1 cut(s) 684
PctI GAATGC 2 cut(s) 487, 1268
PfeI GAWTC 4 cut(s) 55, 263, 1421, 1498
PflMI CCANNNNNTGG 2 cut(s) 242, 1738
PleI GAGTC 2 cut(s) 1294, 1651
PluTI GGCGCC 1 cut(s) 581
PpsI GAGTC 2 cut(s) 1294, 1651
PscI ACATGT 1 cut(s) 304
Psp6I CCWGG 3 cut(s) 115, 992, 1598
PspFI CCCAGC 1 cut(s) 197
PspGI CCWGG 3 cut(s) 115, 992, 1598
PspN4I GGNNCC 5 cut(s) 157, 247, 579, 810, 1729
PspPI GGNCC 1 cut(s) 1438
PstI CTGCAG 1 cut(s) 24
PstNI CAGNNNCTG 1 cut(s) 1067
PsuI RGATCY 1 cut(s) 1280
PvuII CAGCTG 1 cut(s) 1064
RsaI GTAC 4 cut(s) 654, 842, 1525, 1530
RsaNI GTAC 4 cut(s) 653, 841, 1524, 1529
RseI CAYNNNNRTG 2 cut(s) 303, 1251
SapI GCTCTTC 1 cut(s) 684
SaqAI TTAA 5 cut(s) 270, 953, 1040, 1151, 1544
Sau3AI GATC 3 cut(s) 295, 604, 1280
Sau96I GGNCC 1 cut(s) 1438
SchI GAGTC 2 cut(s) 1294, 1652
ScrFI CCNGG 4 cut(s) 117, 223, 994, 1600
SduI GDGCHC 4 cut(s) 1125, 1333, 1668, 1730
SfcI CTRYAG 1 cut(s) 20
SfoI GGCGCC 1 cut(s) 579
SinI GGWCC 1 cut(s) 1438
SmiMI CAYNNNNRTG 2 cut(s) 303, 1251
SmlI CTYRAG 3 cut(s) 710, 1073, 1118
SmoI CTYRAG 3 cut(s) 710, 1073, 1118
SpeI ACTAGT 2 cut(s) 557, 596
SspDI GGCGCC 1 cut(s) 577
SspMI CTAG 6 cut(s) 230, 558, 597, 1028, 1340, 1770
StyD4I CCNGG 4 cut(s) 115, 221, 992, 1598
StyI CCWWGG 1 cut(s) 1581
TaaI ACNGT 1 cut(s) 1528
TaiI ACGT 1 cut(s) 537
TaqI TCGA 5 cut(s) 291, 360, 822, 870, 1161
TatI WGTACW 1 cut(s) 652
TauI GCSGC 5 cut(s) 89, 139, 142, 281, 992
TfiI GAWTC 4 cut(s) 55, 263, 1421, 1498
Tru1I TTAA 5 cut(s) 270, 953, 1040, 1151, 1544
Tru9I TTAA 5 cut(s) 270, 953, 1040, 1151, 1544
TseFI GTSAC 1 cut(s) 455
Tsp45I GTSAC 1 cut(s) 455
TspDTI ATGAA 9 cut(s) 342, 702, 756, 792, 813, 878, 981, 1160, 1235
TspGWI ACGGA 1 cut(s) 1650
Van91I CCANNNNNTGG 2 cut(s) 242, 1738
VpaK11BI GGWCC 1 cut(s) 1438
XapI RAATTY 3 cut(s) 77, 168, 1316
XbaI TCTAGA 1 cut(s) 229
XceI RCATGY 1 cut(s) 308
XmiI GTMKAC 1 cut(s) 531
XspI CTAG 6 cut(s) 230, 558, 597, 1028, 1340, 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.