Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0008554

Physical Location & Seq

Genomic Coordinates Reverse (-)

16698329 .. 16701139

Gene Structure 2811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g17400.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGGAATCTCAGTCCCCAGCTTTTTCAAAGAGCGAAAGTTCCCTTTCGTTTTCACACTCTTACTCCCACTCGCCTGCATCACCATCCTCCTCTTCACCAACATCACCACCAACGCCCCATACCCTCTCTTCTTCTACTCCGATCTCCAGACCTCCCCCTCCTCCTCCCAACCCATCTCTCCTCCCGCGCCCTCCAACCCCGCCGGAGAGCCGCCCCAAGGGGACGAACTCGTTTGGGAGGAACCCACTTTCCCTGTTTCTGGGATTCCCAATTGGAACCTCTGTACGGGTCCGGTGGCCGTCGATTACATTCCGTGCTTGGACAATTCCAAGGCGATCAAGGAGTTGAAGTCGCGCCGGCATATGGAGCACCGCGAGCGGCATTGCCCCCAGCCGCCCCCGCGGTGCCTGGAGCCGCTTCCCAAAGGGTACAAGGTGCCGGTTCCGTGGCCTCAGAGCAGGGACATGATATGGTATGACAATGTTCCTCACCCGAAGCTCGTCGAGTACAAGAAGGACCAAAACTGGGTGAAGAAGTCCGATGACTATCTTATTTTCCCCGGAGGCGGTACTCAGTTTAAGGACGGAGTTGATCACTACACCGATTTCATCGAAAAGACTTTACCGGTTATTGAATGGGGGAGGCACGTCAGGGTTGTTTTGGACGTTGGCTGTGGTGTTGCTAGCTTCGGCGGCTATTTGCTGGATAAAGATGTCATTACCATGTCATTTGCCCCGAAAGATGAACACGAAGCTCAGATACAGTTTGCTCTTGAAAGGGGAATTCCTGCTACTCTCTCAGTGATTGGAACGCAAAGGCTGACATTTCCGGACAATGCATTTGATTTGATTCATTGTGCAAGGTGCCGGGTTCACTGGGATGCAAATGGAGGGAAACCACTCCTGGAGCTCAACAGGGTTCTTCGGCCTGGGGGTTTTTTCGTATGGTCTGCTACGCCAGTTTATCGCGACAATGAAAGAGATACAAGTGTATGGAAATCAATGGAGGCTCTGACAAAATCAATGTGCTGGGACGTCGTTGCTAAGACTGTCGATTCAACTGGAATCGGGCTTGTAATATATCGGAAGCCTATTGCCTTTGTCCGATATTTTAAACGTAAAGAAAAATATCCACCTCTTTGTGGTCCTGCAGAGAGGAAAGTAGGTGCATGGTATGCGCCGCTCACTGCTTGTCTTGCCCCGCTACCTCGCTATAGCTGGCCCTTGCCGTGGCCAAACAGACTTACCAGTAAACCTCCAAGCCTAATGCGTGACCCGGAAGGGGAGGAAATGTTCTACAAGGACACCATTCACTGGACTGCGCTTGTCTCCGATGCCTATCAGAAAAATGCTGCTATAAATTGGTCGACTGTGCGGAATGTAATGGATATGAATGCTGGTTTCGGAGGATTCGCTGCTGCACTTACCGATCAACAACTCTGGGTAATGAACGTCGTCCCCATTCATCTACCAAATACTCTTCCGGCTATTTTTGACAGAGGGTTGATCGGAATATACCATGACTGGTGCGAGTCTTTGAATACCTACCCTAGAACATATGATCTGCTGCATTCCAGTTTCCTCTTCGAAAAACTTCCAGACAGATGCGACATTGTAGATGTCGTCGTGGAGATGGATCGCATATTAAGACCCGGTGGATATCTAGTAGTTCAGGACACAACTGAAGTGATAGACAAGCTGAGACCAATTCTGCAGTCGCTTCACTGGTCTACAGCCCTCTACCGGGATCAGTTTCTTTTCGGTAAGAAAGGTTTCTGGCGTCCATCAAGAGCTGCAAGTAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

603

Amino Acids

68.51

Weight (kDa)

7.87

Isoelectric Point (pI)

41.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40280
fragaria_vesca	FvH4_7g24980
malus_domestica	MD01G1157200.v1.1 MD07G1226000.v1.1
prunus_persica	Prupe.2G255100_v2.0.a1 Prupe.2G255100_v2.0.a1 Prupe.2G255100_v2.0.a1
pyrus_communis	pycom01g17400 pycom03g12170 pycom07g20440
rosa_chinensis	RchiOBHm_Chr1g0370901
rosa_laevigata	RLG00000027000
rosa_multiflora	Rmu_co8467341.1_g000001 Rmu_sc0001018.1_g000001 Rmu_sc0022073.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286140
rosa_rugosa	Rorug01G0360100 Rorug01G0360100
rosa_samantha	Rh1AG370100 Rh1BG333700 Rh1CG347000 Rh1DG364900
rosa_wichuraiana	Rw1G032570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1038
AccB1I	GGYRCC	3 cut(s)	405, 436, 864
AccB7I	CCANNNNNTGG	1 cut(s)	1314
AccBSI	CCGCTC	2 cut(s)	379, 1183
AccI	GTMKAC	2 cut(s)	1367, 1730
AccII	CGCG	5 cut(s)	188, 355, 375, 403, 969
AccIII	TCCGGA	1 cut(s)	829
AclWI	GGATC	2 cut(s)	1644, 1755
AcoI	YGGCCR	2 cut(s)	297, 1232
AcsI	RAATTY	1 cut(s)	783
AcuI	CTGAAG	1 cut(s)	1704
AcyI	GRCGYC	2 cut(s)	1035, 1780
AfaI	GTAC	4 cut(s)	286, 431, 509, 571
AgeI	ACCGGT	1 cut(s)	625
AgsI	TTSAA	6 cut(s)	28, 349, 635, 776, 1059, 1540
AjiI	CACGTC	1 cut(s)	649
AjnI	CCWGG	3 cut(s)	408, 903, 928
AloI	GAACNNNNNNTCC	4 cut(s)	234, 266, 1277, 1309
AluBI	AGCT	8 cut(s)	21, 499, 687, 755, 910, 1218, 1699, 1793
AluI	AGCT	8 cut(s)	21, 499, 687, 755, 910, 1218, 1699, 1793
Alw21I	GWGCWC	2 cut(s)	372, 912
Alw26I	GTCTC	2 cut(s)	1333, 1696
AlwI	GGATC	2 cut(s)	1644, 1755
Aor13HI	TCCGGA	1 cut(s)	829
AoxI	GGCC	5 cut(s)	297, 449, 926, 1220, 1232
ApeKI	GCWGC	5 cut(s)	1352, 1415, 1418, 1567, 1793
ApoI	RAATTY	1 cut(s)	783
ArsI	GACNNNNNNTTYG	2 cut(s)	824, 856
AsiGI	ACCGGT	1 cut(s)	625
Asp700I	GAANNNNTTC	2 cut(s)	1593, 1772
AspLEI	GCGC	4 cut(s)	190, 357, 1180, 1324
AspS9I	GGNCC	4 cut(s)	290, 517, 1145, 1221
AsuC2I	CCSGG	5 cut(s)	561, 869, 1277, 1653, 1745
AsuHPI	GGTGA	5 cut(s)	73, 88, 97, 482, 541
AsuII	TTCGAA	1 cut(s)	1587
AsuNHI	GCTAGC	1 cut(s)	683
AvaII	GGWCC	3 cut(s)	290, 517, 1145
BaeI	ACNNNNGTAYC	2 cut(s)	975, 1008
BalI	TGGCCA	1 cut(s)	1234
BanI	GGYRCC	3 cut(s)	405, 436, 864
BanII	GRGCYC	1 cut(s)	912
BarI	GAAGNNNNNNTAC	2 cut(s)	744, 776
Bbv12I	GWGCWC	2 cut(s)	372, 912
BbvI	GCAGC	5 cut(s)	1339, 1402, 1405, 1554, 1780
BccI	CCATC	4 cut(s)	92, 182, 1627, 1792
BceAI	ACGGC	2 cut(s)	284, 1213
BciT130I	CCWGG	3 cut(s)	410, 905, 930
BclI	TGATCA	1 cut(s)	592
BcnI	CCSGG	5 cut(s)	561, 869, 1277, 1653, 1745
BcoDI	GTCTC	2 cut(s)	1333, 1696
BfaI	CTAG	3 cut(s)	684, 1551, 1664
BfmI	CTRYAG	4 cut(s)	1149, 1213, 1712, 1731
Bme1390I	CCNGG	8 cut(s)	410, 561, 869, 905, 930, 1277, 1653, 1745
Bme18I	GGWCC	3 cut(s)	290, 517, 1145
BmgBI	CACGTC	1 cut(s)	649
BmgT120I	GGNCC	4 cut(s)	290, 517, 1145, 1221
BmiI	GGNNCC	8 cut(s)	243, 278, 291, 407, 414, 438, 444, 866
BmrFI	CCNGG	8 cut(s)	410, 561, 869, 905, 930, 1277, 1653, 1745
BmrI	ACTGGG	2 cut(s)	535, 886
BmsI	GCATC	4 cut(s)	87, 871, 1324, 1595
BmtI	GCTAGC	1 cut(s)	687
BmuI	ACTGGG	2 cut(s)	535, 886
BpmI	CTGGAG	3 cut(s)	131, 431, 926
Bpu14I	TTCGAA	1 cut(s)	1587
BpuMI	CCSGG	5 cut(s)	561, 869, 1277, 1653, 1745
BsaBI	GATNNNNATC	2 cut(s)	546, 1338
BsaHI	GRCGYC	2 cut(s)	1035, 1780
BsaI	GGTCTC	1 cut(s)	1696
BsaJI	CCNNGG	7 cut(s)	217, 330, 401, 446, 559, 929, 1229
BsaWI	WCCGGW	3 cut(s)	292, 625, 829
BsaXI	ACNNNNNCTCC	6 cut(s)	48, 78, 335, 365, 1277, 1307
Bse118I	RCCGGY	3 cut(s)	357, 439, 625
Bse1I	ACTGG	9 cut(s)	530, 881, 959, 1066, 1248, 1319, 1529, 1575, 1730
Bse3DI	GCAATG	1 cut(s)	382
Bse8I	GATNNNNATC	2 cut(s)	546, 1338
BseAI	TCCGGA	1 cut(s)	829
BseBI	CCWGG	3 cut(s)	410, 905, 930
BseDI	CCNNGG	7 cut(s)	217, 330, 401, 446, 559, 929, 1229
BseGI	GGATG	2 cut(s)	84, 886
BseJI	GATNNNNATC	2 cut(s)	546, 1338
BseMI	GCAATG	1 cut(s)	382
BseMII	CTCAG	6 cut(s)	24, 467, 587, 770, 813, 1691
BseNI	ACTGG	9 cut(s)	530, 881, 959, 1066, 1248, 1319, 1529, 1575, 1730
BseRI	GAGGAG	4 cut(s)	80, 151, 154, 171
BseXI	GCAGC	5 cut(s)	1339, 1402, 1405, 1554, 1780
BseYI	CCCAGC	3 cut(s)	17, 390, 1029
BsgI	GTGCAG	1 cut(s)	1404
Bsh1236I	CGCG	5 cut(s)	188, 355, 375, 403, 969
BshFI	GGCC	5 cut(s)	299, 451, 928, 1222, 1234
BshNI	GGYRCC	3 cut(s)	405, 436, 864
BshTI	ACCGGT	1 cut(s)	625
BsiHKAI	GWGCWC	2 cut(s)	372, 912
BslFI	GGGAC	4 cut(s)	236, 476, 1046, 1442
BsmAI	GTCTC	2 cut(s)	1333, 1696
BsmFI	GGGAC	4 cut(s)	236, 476, 1046, 1442
BsmI	GAATGC	2 cut(s)	1399, 1570
BsnI	GGCC	5 cut(s)	299, 451, 928, 1222, 1234
Bso31I	GGTCTC	1 cut(s)	1696
Bsp119I	TTCGAA	1 cut(s)	1587
Bsp1286I	GDGCHC	2 cut(s)	372, 912
Bsp13I	TCCGGA	1 cut(s)	829
Bsp143I	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
Bsp68I	TCGCGA	1 cut(s)	969
BspANI	GGCC	5 cut(s)	299, 451, 928, 1222, 1234
BspCNI	CTCAG	6 cut(s)	23, 466, 586, 769, 812, 1692
BspEI	TCCGGA	1 cut(s)	829
BspFNI	CGCG	5 cut(s)	188, 355, 375, 403, 969
BspHI	TCATGA	1 cut(s)	1805
BspLI	GGNNCC	8 cut(s)	243, 278, 291, 407, 414, 438, 444, 866
BspMAI	CTGCAG	2 cut(s)	1153, 1716
BspOI	GCTAGC	1 cut(s)	687
BspPI	GGATC	2 cut(s)	1644, 1755
BspT104I	TTCGAA	1 cut(s)	1587
BspT107I	GGYRCC	3 cut(s)	405, 436, 864
BspTNI	GGTCTC	1 cut(s)	1696
BsrBI	CCGCTC	2 cut(s)	379, 1183
BsrDI	GCAATG	1 cut(s)	382
BsrFI	RCCGGY	3 cut(s)	357, 439, 625
BsrI	ACTGG	9 cut(s)	530, 881, 959, 1066, 1248, 1319, 1529, 1575, 1730
BssAI	RCCGGY	3 cut(s)	357, 439, 625
BssECI	CCNNGG	7 cut(s)	217, 330, 401, 446, 559, 929, 1229
BssMI	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
BssNI	GRCGYC	2 cut(s)	1035, 1780
BssT1I	CCWWGG	2 cut(s)	217, 330
Bst2UI	CCWGG	3 cut(s)	410, 905, 930
Bst4CI	ACNGT	3 cut(s)	765, 1051, 1372
Bst6I	CTCTTC	4 cut(s)	98, 134, 1485, 1589
BstACI	GRCGYC	2 cut(s)	1035, 1780
BstAPI	GCANNNNNTGC	1 cut(s)	1175
BstBI	TTCGAA	1 cut(s)	1587
BstC8I	GCNNGC	5 cut(s)	76, 359, 377, 685, 1220
BstDEI	CTNAG	7 cut(s)	10, 453, 573, 756, 799, 1044, 1700
BstDSI	CCRYGG	3 cut(s)	401, 446, 1229
BstF5I	GGATG	2 cut(s)	84, 886
BstFNI	CGCG	5 cut(s)	188, 355, 375, 403, 969
BstHHI	GCGC	4 cut(s)	190, 357, 1180, 1324
BstKTI	GATC	8 cut(s)	145, 339, 595, 1432, 1509, 1564, 1639, 1750
BstMAI	GTCTC	2 cut(s)	1333, 1696
BstMBI	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
BstMWI	GCNNNNNNNGC	6 cut(s)	367, 376, 400, 693, 1175, 1196
BstNI	CCWGG	3 cut(s)	410, 905, 930
BstSCI	CCNGG	8 cut(s)	408, 559, 867, 903, 928, 1275, 1651, 1743
BstSFI	CTRYAG	4 cut(s)	1149, 1213, 1712, 1731
BstUI	CGCG	5 cut(s)	188, 355, 375, 403, 969
BstV1I	GCAGC	5 cut(s)	1339, 1402, 1405, 1554, 1780
BsuRI	GGCC	5 cut(s)	299, 451, 928, 1222, 1234
BtgI	CCRYGG	3 cut(s)	401, 446, 1229
BtrI	CACGTC	1 cut(s)	649
BtsCI	GGATG	2 cut(s)	84, 886
BtsI	GCAGTG	1 cut(s)	1185
BtsIMutI	CAGTG	5 cut(s)	807, 874, 1185, 1312, 1723
BtuMI	TCGCGA	1 cut(s)	969
Cac8I	GCNNGC	5 cut(s)	76, 359, 377, 685, 1220
CciI	TCATGA	1 cut(s)	1805
CfoI	GCGC	4 cut(s)	190, 357, 1180, 1324
Cfr10I	RCCGGY	3 cut(s)	357, 439, 625
Cfr13I	GGNCC	4 cut(s)	290, 517, 1145, 1221
Cfr42I	CCGCGG	1 cut(s)	404
CseI	GACGC	1 cut(s)	1769
Csp6I	GTAC	4 cut(s)	285, 430, 508, 570
CspAI	ACCGGT	1 cut(s)	625
CviAII	CATG	5 cut(s)	466, 724, 1170, 1520, 1806
CviQI	GTAC	4 cut(s)	285, 430, 508, 570
DdeI	CTNAG	7 cut(s)	10, 453, 573, 756, 799, 1044, 1700
DpnI	GATC	8 cut(s)	144, 338, 594, 1431, 1508, 1563, 1638, 1749
DpnII	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
DraI	TTTAAA	1 cut(s)	1114
EaeI	YGGCCR	2 cut(s)	297, 1232
Eam1104I	CTCTTC	4 cut(s)	98, 134, 1485, 1589
EarI	CTCTTC	4 cut(s)	98, 134, 1485, 1589
Ecl136II	GAGCTC	1 cut(s)	910
Eco130I	CCWWGG	2 cut(s)	217, 330
Eco24I	GRGCYC	1 cut(s)	912
Eco31I	GGTCTC	1 cut(s)	1696
Eco32I	GATATC	1 cut(s)	1661
Eco47I	GGWCC	3 cut(s)	290, 517, 1145
Eco53kI	GAGCTC	1 cut(s)	910
Eco57I	CTGAAG	1 cut(s)	1704
EcoICRI	GAGCTC	1 cut(s)	910
EcoRI	GAATTC	1 cut(s)	783
EcoRII	CCWGG	3 cut(s)	408, 903, 928
EcoRV	GATATC	1 cut(s)	1661
EcoT14I	CCWWGG	2 cut(s)	217, 330
EcoT22I	ATGCAT	1 cut(s)	841
EcoT38I	GRGCYC	1 cut(s)	912
ErhI	CCWWGG	2 cut(s)	217, 330
FaeI	CATG	5 cut(s)	469, 727, 1173, 1523, 1809
FaqI	GGGAC	4 cut(s)	236, 476, 1046, 1442
FatI	CATG	5 cut(s)	465, 723, 1169, 1519, 1805
FauI	CCCGC	4 cut(s)	193, 208, 408, 1209
FauNDI	CATATG	2 cut(s)	363, 1558
FbaI	TGATCA	1 cut(s)	592
FblI	GTMKAC	2 cut(s)	1367, 1730
FokI	GGATG	2 cut(s)	71, 893
FriOI	GRGCYC	1 cut(s)	912
FspBI	CTAG	3 cut(s)	684, 1551, 1664
GlaI	GCGC	4 cut(s)	189, 356, 1179, 1323
GsaI	CCCAGC	3 cut(s)	21, 394, 1033
GsuI	CTGGAG	3 cut(s)	131, 431, 926
HaeIII	GGCC	5 cut(s)	299, 451, 928, 1222, 1234
HgaI	GACGC	1 cut(s)	1769
HhaI	GCGC	4 cut(s)	190, 357, 1180, 1324
Hin1I	GRCGYC	2 cut(s)	1035, 1780
Hin1II	CATG	5 cut(s)	469, 727, 1173, 1523, 1809
Hin6I	GCGC	4 cut(s)	188, 355, 1178, 1322
HinP1I	GCGC	4 cut(s)	188, 355, 1178, 1322
HincII	GTYRAC	1 cut(s)	1368
HindII	GTYRAC	1 cut(s)	1368
HinfI	GANTC	7 cut(s)	6, 265, 850, 1055, 1065, 1410, 1532
HphI	GGTGA	5 cut(s)	73, 88, 97, 482, 541
Hpy166II	GTNNAC	4 cut(s)	874, 1253, 1368, 1731
Hpy188III	TCNNGA	8 cut(s)	148, 773, 830, 968, 1598, 1673, 1788, 1806
Hpy8I	GTNNAC	4 cut(s)	874, 1253, 1368, 1731
Hpy99I	CGWCG	5 cut(s)	305, 506, 1040, 1457, 1628
HpyAV	CCTTC	2 cut(s)	508, 1274
HpyCH4III	ACNGT	3 cut(s)	765, 1051, 1372
HpyCH4IV	ACGT	5 cut(s)	648, 666, 1035, 1117, 1452
HpyF10VI	GCNNNNNNNGC	6 cut(s)	367, 376, 400, 693, 1175, 1196
HpyF3I	CTNAG	7 cut(s)	10, 453, 573, 756, 799, 1044, 1700
HpySE526I	ACGT	5 cut(s)	648, 666, 1035, 1117, 1452
Hsp92I	GRCGYC	2 cut(s)	1035, 1780
Hsp92II	CATG	5 cut(s)	469, 727, 1173, 1523, 1809
HspAI	GCGC	4 cut(s)	188, 355, 1178, 1322
Kpn2I	TCCGGA	1 cut(s)	829
KroI	GCCGGC	1 cut(s)	357
KroNI	GCCGGC	1 cut(s)	359
Ksp22I	TGATCA	1 cut(s)	592
KspI	CCGCGG	1 cut(s)	404
Kzo9I	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
LmnI	GCTCC	3 cut(s)	367, 412, 907
Lsp1109I	GCAGC	5 cut(s)	1339, 1402, 1405, 1554, 1780
LweI	GCATC	4 cut(s)	87, 871, 1324, 1595
MaeI	CTAG	3 cut(s)	684, 1551, 1664
MaeII	ACGT	5 cut(s)	648, 666, 1035, 1117, 1452
MaeIII	GTNAC	1 cut(s)	1271
MalI	GATC	8 cut(s)	144, 338, 594, 1431, 1508, 1563, 1638, 1749
MbiI	CCGCTC	2 cut(s)	379, 1183
MboI	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
MboII	GAAGA	7 cut(s)	85, 121, 124, 544, 914, 1472, 1576
MfeI	CAATTG	1 cut(s)	271
MhlI	GDGCHC	2 cut(s)	372, 912
MlsI	TGGCCA	1 cut(s)	1234
MluCI	AATT	5 cut(s)	271, 325, 783, 1360, 1707
MluNI	TGGCCA	1 cut(s)	1234
MlyI	GAGTC	1 cut(s)	1541
MmeI	TCCRAC	1 cut(s)	219
Mox20I	TGGCCA	1 cut(s)	1234
Mph1103I	ATGCAT	1 cut(s)	841
MroI	TCCGGA	1 cut(s)	829
MroNI	GCCGGC	1 cut(s)	357
MroXI	GAANNNNTTC	2 cut(s)	1593, 1772
MscI	TGGCCA	1 cut(s)	1234
MseI	TTAA	3 cut(s)	579, 1113, 1646
MslI	CAYNNNNRTG	2 cut(s)	722, 879
Msp20I	TGGCCA	1 cut(s)	1234
MspA1I	CMGCKG	1 cut(s)	403
MspR9I	CCNGG	8 cut(s)	410, 561, 869, 905, 930, 1277, 1653, 1745
MunI	CAATTG	1 cut(s)	271
Mva1269I	GAATGC	2 cut(s)	1399, 1570
MvaI	CCWGG	3 cut(s)	410, 905, 930
MvnI	CGCG	5 cut(s)	188, 355, 375, 403, 969
MwoI	GCNNNNNNNGC	6 cut(s)	367, 376, 400, 693, 1175, 1196
NaeI	GCCGGC	1 cut(s)	359
NciI	CCSGG	5 cut(s)	561, 869, 1277, 1653, 1745
NdeI	CATATG	2 cut(s)	363, 1558
NdeII	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
NgoMIV	GCCGGC	1 cut(s)	357
NheI	GCTAGC	1 cut(s)	683
NlaIII	CATG	5 cut(s)	469, 727, 1173, 1523, 1809
NlaIV	GGNNCC	8 cut(s)	243, 278, 291, 407, 414, 438, 444, 866
NmuCI	GTSAC	1 cut(s)	1271
NruI	TCGCGA	1 cut(s)	969
NsiI	ATGCAT	1 cut(s)	841
NspV	TTCGAA	1 cut(s)	1587
PagI	TCATGA	1 cut(s)	1805
PctI	GAATGC	2 cut(s)	1399, 1570
PdiI	GCCGGC	1 cut(s)	359
PdmI	GAANNNNTTC	2 cut(s)	1593, 1772
PfeI	GAWTC	6 cut(s)	6, 265, 850, 1055, 1065, 1410
PflMI	CCANNNNNTGG	1 cut(s)	1314
PfoI	TCCNGGA	1 cut(s)	903
PinAI	ACCGGT	1 cut(s)	625
PleI	GAGTC	1 cut(s)	1540
PpsI	GAGTC	1 cut(s)	1540
Psp124BI	GAGCTC	1 cut(s)	912
Psp6I	CCWGG	3 cut(s)	408, 903, 928
PspFI	CCCAGC	3 cut(s)	17, 390, 1029
PspGI	CCWGG	3 cut(s)	408, 903, 928
PspN4I	GGNNCC	8 cut(s)	243, 278, 291, 407, 414, 438, 444, 866
PspPI	GGNCC	4 cut(s)	290, 517, 1145, 1221
PstI	CTGCAG	2 cut(s)	1153, 1716
RruI	TCGCGA	1 cut(s)	969
RsaI	GTAC	4 cut(s)	286, 431, 509, 571
RsaNI	GTAC	4 cut(s)	285, 430, 508, 570
RseI	CAYNNNNRTG	2 cut(s)	722, 879
SacI	GAGCTC	1 cut(s)	912
SacII	CCGCGG	1 cut(s)	404
SalI	GTCGAC	1 cut(s)	1366
SaqAI	TTAA	3 cut(s)	579, 1113, 1646
Sau3AI	GATC	8 cut(s)	142, 336, 592, 1429, 1506, 1561, 1636, 1747
Sau96I	GGNCC	4 cut(s)	290, 517, 1145, 1221
SchI	GAGTC	1 cut(s)	1541
ScrFI	CCNGG	8 cut(s)	410, 561, 869, 905, 930, 1277, 1653, 1745
SduI	GDGCHC	2 cut(s)	372, 912
SfaNI	GCATC	4 cut(s)	87, 871, 1324, 1595
SfcI	CTRYAG	4 cut(s)	1149, 1213, 1712, 1731
Sfr303I	CCGCGG	1 cut(s)	404
SfuI	TTCGAA	1 cut(s)	1587
SgrBI	CCGCGG	1 cut(s)	404
SinI	GGWCC	3 cut(s)	290, 517, 1145
SmiMI	CAYNNNNRTG	2 cut(s)	722, 879
Sse9I	AATT	5 cut(s)	271, 325, 783, 1360, 1707
SspMI	CTAG	3 cut(s)	684, 1551, 1664
SstI	GAGCTC	1 cut(s)	912
StyD4I	CCNGG	8 cut(s)	408, 559, 867, 903, 928, 1275, 1651, 1743
StyI	CCWWGG	2 cut(s)	217, 330
TaaI	ACNGT	3 cut(s)	765, 1051, 1372
TaiI	ACGT	5 cut(s)	651, 669, 1038, 1120, 1455
TaqI	TCGA	6 cut(s)	303, 504, 612, 1053, 1367, 1587
TasI	AATT	5 cut(s)	271, 325, 783, 1360, 1707
TatI	WGTACW	1 cut(s)	507
TauI	GCSGC	6 cut(s)	214, 382, 397, 418, 696, 1183
TfiI	GAWTC	6 cut(s)	6, 265, 850, 1055, 1065, 1410
Tru1I	TTAA	3 cut(s)	579, 1113, 1646
Tru9I	TTAA	3 cut(s)	579, 1113, 1646
TscAI	CASTG	5 cut(s)	807, 881, 1192, 1319, 1730
TseFI	GTSAC	1 cut(s)	1271
TseI	GCWGC	5 cut(s)	1352, 1415, 1418, 1567, 1793
Tsp45I	GTSAC	1 cut(s)	1271
TspDTI	ATGAA	7 cut(s)	598, 759, 842, 990, 1406, 1454, 1463
TspGWI	ACGGA	3 cut(s)	303, 435, 600
TspRI	CASTG	5 cut(s)	807, 881, 1192, 1319, 1730
Van91I	CCANNNNNTGG	1 cut(s)	1314
VpaK11BI	GGWCC	3 cut(s)	290, 517, 1145
XapI	RAATTY	1 cut(s)	783
XmiI	GTMKAC	2 cut(s)	1367, 1730
XmnI	GAANNNNTTC	2 cut(s)	1593, 1772
XspI	CTAG	3 cut(s)	684, 1551, 1664
ZraI	GACGTC	1 cut(s)	1036
Zsp2I	ATGCAT	1 cut(s)	841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.