Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0013507

Physical Location & Seq

Genomic Coordinates Reverse (-)

18758064 .. 18762210

Gene Structure 4147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGAAAGAGAGAATTTTTATGTTTCCGAACGTACATGTGGCAACCATGGATTTTCCGAACTTCTTTGAATCTGTCAGCGTTCACAAATCTGTCAGCATTCAGAGACTTAAATCTTCCCCAACATCTTCCACTCTCTATCTCTCTCTCTCTACCCTCTGCAACACAAACTCAAGAAAAATGGCACTTTCTCTCAGATTACACAACCTTCCCTACCCGACCTTCAGACCCAAACCACGATCATCATCAAAGGCCACTCTGTCTCCTCCTAATCCATCTCTCTCTCTCCTCTCCTCCTCTCCCCTTCCGCACCTCCTACTCAGAACCTCACACTCCCTCACCATTAGAGCCGCTTCCTCCTCCTCTTCTTCCCCGACCACGGTTGCTGATCCACAGGGCATCAAGATTAATTTGGTTCCCACTGAACCAATTGAAGGTCAGAAGACTGGAACCAGTGGTCTCCGAAAAAAGGTGAAAGTTTTTCAGCAAGAAAATTACCTTGCAAATTGGATTCAGGCTTTATTTGATTCGTTGCCGCCTGAGGATTACAAGAATGGGGTATTAGTGTTAGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCACAGATTATTATCAAAATTGCCGCAGGGAACGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATCTTGTCAACACCTGCCGTTTCTGCAGTAATCAGAAAGAGGAAGGCCAATGGGGGATTTATTATGAGTGCAAGCCACAATCCTGGTGGACCTGATTATGATTGGGGTATTAAGTTTAATTACAACAGTGGTCAACCTGCACCCGAGTCGATCACAGATAAGATTTACGGAAACACTCTTTCTATCTCTGAAATAAAGGTAGCAGATATTGCTGATGTTGACCTATCTACTCTCGGAGTTGTAAAGTATGGGAACTTCAGTGTTGAAGTTGTAGATCCGGTTTCTGATTATTTGGAACTGTTGGAGAATGTATTTGACTTCCAGCTTATTAAGAGTCTTCTACAGTTAGACTTCAGGTTTATGTTTGACGCAATGCATGCTGTTACTGGTGCTTATGCAAAACCCATCTTTGTGGATAAGCTCGGAGCCAGTCCGGATTCAATTTCAAATGGAGTGCCTCTGGAGGATTTTGGTCATGGTCATCCAGATCCTAATCTTACATATGCCAAGGATTTGGTCGACATTCTGTATAGCGAAAATGGACCTGACTTTGGGGCTGCTAGTGATGGGGATGGTGATAGAAACATGATTCTTGGTAGAAGCTTTTTCGTCACTCCTTCAGACTCTGTTGCAATTATTGCAGCCAATGCACAAGAAGCTATTCCATACTTCCGGGGTGGTCCCAAGGGATTAGCTCGATCCATGCCAACAAGTGGTGCACTTGATCGTGTTGCTGAAAAATTGAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGTAATCTTATGGATGCTGGGAAGTTATCTATCTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGATCGAACATCCGCGAGAAAGATGGCATATGGGCTGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0004614 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005982 GO:0005996 GO:0006006 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009628 GO:0009629 GO:0009941 GO:0009987 GO:0010319 GO:0015980 GO:0016051 GO:0016052 GO:0016853 GO:0016866 GO:0016868 GO:0019252 GO:0019318 GO:0019320 GO:0019388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0048046 GO:0050896 GO:0051606 GO:0055114 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00052 ko00230 ko00500 ko00520 ko00521 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00052 map00230 map00500 map00520 map00521 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PGM_PMM_I PGM_PMM_II PGM_PMM_III PGM_PMM_IV

Protein Analysis

519

Amino Acids

56.09

Weight (kDa)

8.25

Isoelectric Point (pI)

35.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	146 - 285	5.4e-34	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	318 - 419	6e-12	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	429 - 505	4.8e-14	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51820
fragaria_vesca	FvH4_7g28680 FvH4_7g28680
malus_domestica	MD00G1003800.v1.1 MD01G1192300.v1.1
prunus_persica	Prupe.2G286900_v2.0.a1
pyrus_communis	pycom01g20350 pycom07g23920
rosa_chinensis	RchiOBHm_Chr1g0376171
rosa_laevigata	RLG00000026623
rosa_multiflora	Rmu_ssc0000116.1_g000052
rosa_roxburghii	Rroxscaffold_4G00282330
rosa_rugosa	Rorug01G0394200
rosa_samantha	Rh1AG405800 Rh1BG369500 Rh1CG382200 Rh1DG399100
rosa_wichuraiana	Rw1G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	688
Acc36I	ACCTGC	2 cut(s)	688, 811
AccB7I	CCANNNNNTGG	2 cut(s)	1379, 1440
AccI	GTMKAC	1 cut(s)	1185
AccII	CGCG	1 cut(s)	1529
AccIII	TCCGGA	1 cut(s)	1099
AciI	CCGC	6 cut(s)	305, 348, 533, 624, 1488, 1527
AclWI	GGATC	4 cut(s)	380, 935, 1148, 1359
AcsI	RAATTY	2 cut(s)	12, 645
AcuI	CTGAAG	4 cut(s)	205, 907, 1003, 1269
AfaI	GTAC	1 cut(s)	33
AfiI	CCNNNNNNNGG	6 cut(s)	376, 431, 466, 1217, 1379, 1440
AflIII	ACRYGT	1 cut(s)	34
AgsI	TTSAA	6 cut(s)	68, 431, 932, 1107, 1113, 1411
AjnI	CCWGG	1 cut(s)	748
AjuI	GAANNNNNNNTTGG	2 cut(s)	1485, 1517
AluBI	AGCT	7 cut(s)	599, 991, 1087, 1269, 1325, 1361, 1414
AluI	AGCT	7 cut(s)	599, 991, 1087, 1269, 1325, 1361, 1414
Alw21I	GWGCWC	1 cut(s)	1387
Alw26I	GTCTC	3 cut(s)	97, 264, 461
Alw44I	GTGCAC	1 cut(s)	1383
AlwI	GGATC	4 cut(s)	380, 935, 1148, 1359
AlwNI	CAGNNNCTG	2 cut(s)	1292, 1514
Ama87I	CYCGRG	1 cut(s)	809
Aor13HI	TCCGGA	1 cut(s)	1099
AoxI	GGCC	2 cut(s)	249, 711
ApaLI	GTGCAC	1 cut(s)	1383
ApeKI	GCWGC	3 cut(s)	599, 1223, 1307
ApoI	RAATTY	2 cut(s)	12, 645
AseI	ATTAAT	1 cut(s)	405
Asp700I	GAANNNNTTC	2 cut(s)	1326, 1510
AspS9I	GGNCC	3 cut(s)	755, 1208, 1346
AsuC2I	CCSGG	1 cut(s)	1340
AsuHPI	GGTGA	4 cut(s)	328, 481, 584, 1253
AvaI	CYCGRG	1 cut(s)	809
AvaII	GGWCC	3 cut(s)	755, 1208, 1346
AxyI	CCTNAGG	1 cut(s)	537
BaeGI	GKGCMC	1 cut(s)	1387
BarI	GAAGNNNNNNTAC	2 cut(s)	905, 937
BbsI	GAAGAC	2 cut(s)	446, 995
Bbv12I	GWGCWC	1 cut(s)	1387
BbvI	GCAGC	3 cut(s)	586, 1210, 1319
BccI	CCATC	6 cut(s)	280, 569, 1079, 1226, 1232, 1531
BceAI	ACGGC	1 cut(s)	668
BcgI	CGANNNNNNTGC	2 cut(s)	795, 829
BciT130I	CCWGG	1 cut(s)	750
BcnI	CCSGG	1 cut(s)	1340
BcoDI	GTCTC	3 cut(s)	97, 264, 461
BfaI	CTAG	1 cut(s)	1227
BfmI	CTRYAG	2 cut(s)	690, 1007
BfuAI	ACCTGC	2 cut(s)	688, 811
BisI	GCNGC	6 cut(s)	348, 533, 600, 624, 1224, 1308
BlsI	GCNGC	6 cut(s)	349, 534, 601, 625, 1225, 1309
Bme1390I	CCNGG	2 cut(s)	750, 1340
Bme18I	GGWCC	3 cut(s)	755, 1208, 1346
BmeT110I	CYCGRG	1 cut(s)	809
BmgT120I	GGNCC	3 cut(s)	755, 1208, 1346
BmiI	GGNNCC	5 cut(s)	414, 448, 1093, 1348, 1431
BmrFI	CCNGG	2 cut(s)	750, 1340
BmsI	GCATC	2 cut(s)	405, 1456
BpiI	GAAGAC	2 cut(s)	446, 995
BpmI	CTGGAG	1 cut(s)	1148
BpuEI	CTTGAG	1 cut(s)	154
BpuMI	CCSGG	1 cut(s)	1340
BsaBI	GATNNNNATC	3 cut(s)	241, 611, 1158
BsaI	GGTCTC	1 cut(s)	461
BsaJI	CCNNGG	5 cut(s)	45, 375, 1173, 1339, 1350
BsaWI	WCCGGW	2 cut(s)	943, 1099
BsaXI	ACNNNNNCTCC	2 cut(s)	244, 274
Bsc4I	CCNNNNNNNGG	6 cut(s)	376, 431, 466, 1217, 1379, 1440
Bse1I	ACTGG	5 cut(s)	448, 450, 1057, 1095, 1441
Bse21I	CCTNAGG	1 cut(s)	537
Bse3DI	GCAATG	1 cut(s)	1044
Bse8I	GATNNNNATC	3 cut(s)	241, 611, 1158
BseAI	TCCGGA	1 cut(s)	1099
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	5 cut(s)	45, 375, 1173, 1339, 1350
BseGI	GGATG	4 cut(s)	1147, 1243, 1471, 1523
BseJI	GATNNNNATC	3 cut(s)	241, 611, 1158
BseLI	CCNNNNNNNGG	6 cut(s)	376, 431, 466, 1217, 1379, 1440
BseMI	GCAATG	1 cut(s)	1044
BseMII	CTCAG	3 cut(s)	205, 331, 528
BseNI	ACTGG	5 cut(s)	448, 450, 1057, 1095, 1441
BseRI	GAGGAG	6 cut(s)	252, 275, 280, 283, 346, 349
BseSI	GKGCMC	1 cut(s)	1387
BseXI	GCAGC	3 cut(s)	586, 1210, 1319
BseYI	CCCAGC	1 cut(s)	1469
BsgI	GTGCAG	2 cut(s)	585, 789
Bsh1236I	CGCG	1 cut(s)	1529
BshFI	GGCC	2 cut(s)	251, 713
BsiHKAI	GWGCWC	1 cut(s)	1387
BsiHKCI	CYCGRG	1 cut(s)	809
BsiSI	CCGG	3 cut(s)	944, 1100, 1339
BslFI	GGGAC	1 cut(s)	1332
BslI	CCNNNNNNNGG	6 cut(s)	376, 431, 466, 1217, 1379, 1440
BsmAI	GTCTC	3 cut(s)	97, 264, 461
BsmFI	GGGAC	1 cut(s)	1332
BsmI	GAATGC	1 cut(s)	96
BsnI	GGCC	2 cut(s)	251, 713
Bso31I	GGTCTC	1 cut(s)	461
BsoBI	CYCGRG	1 cut(s)	809
Bsp1286I	GDGCHC	1 cut(s)	1387
Bsp13I	TCCGGA	1 cut(s)	1099
Bsp143I	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
Bsp19I	CCATGG	1 cut(s)	45
BspACI	CCGC	6 cut(s)	305, 348, 533, 624, 1488, 1527
BspANI	GGCC	2 cut(s)	251, 713
BspCNI	CTCAG	3 cut(s)	204, 330, 529
BspEI	TCCGGA	1 cut(s)	1099
BspFNI	CGCG	1 cut(s)	1529
BspLI	GGNNCC	5 cut(s)	414, 448, 1093, 1348, 1431
BspMAI	CTGCAG	1 cut(s)	694
BspMI	ACCTGC	2 cut(s)	688, 811
BspPI	GGATC	4 cut(s)	380, 935, 1148, 1359
BspTNI	GGTCTC	1 cut(s)	461
BsrDI	GCAATG	1 cut(s)	1044
BsrI	ACTGG	5 cut(s)	448, 450, 1057, 1095, 1441
BssECI	CCNNGG	5 cut(s)	45, 375, 1173, 1339, 1350
BssMI	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
BssT1I	CCWWGG	3 cut(s)	45, 1173, 1350
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	5 cut(s)	379, 635, 794, 966, 1011
Bst6I	CTCTTC	2 cut(s)	367, 1488
BstAPI	GCANNNNNTGC	4 cut(s)	875, 1043, 1304, 1313
BstC8I	GCNNGC	2 cut(s)	739, 1044
BstDEI	CTNAG	3 cut(s)	191, 317, 537
BstDSI	CCRYGG	2 cut(s)	45, 375
BstF5I	GGATG	4 cut(s)	1147, 1243, 1471, 1523
BstFNI	CGCG	1 cut(s)	1529
BstKTI	GATC	8 cut(s)	239, 388, 819, 943, 1156, 1367, 1393, 1519
BstMAI	GTCTC	3 cut(s)	97, 264, 461
BstMBI	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
BstMWI	GCNNNNNNNGC	6 cut(s)	689, 875, 1043, 1304, 1313, 1322
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	2 cut(s)	38, 1046
BstSCI	CCNGG	2 cut(s)	748, 1338
BstSFI	CTRYAG	2 cut(s)	690, 1007
BstSLI	GKGCMC	1 cut(s)	1387
BstUI	CGCG	1 cut(s)	1529
BstV1I	GCAGC	3 cut(s)	586, 1210, 1319
BstV2I	GAAGAC	2 cut(s)	446, 995
BstX2I	RGATCY	2 cut(s)	940, 1153
BstXI	CCANNNNNNTGG	3 cut(s)	749, 1078, 1180
BstYI	RGATCY	2 cut(s)	940, 1153
Bsu36I	CCTNAGG	1 cut(s)	537
BsuRI	GGCC	2 cut(s)	251, 713
BtgI	CCRYGG	2 cut(s)	45, 375
BtsCI	GGATG	4 cut(s)	1147, 1243, 1471, 1523
BtsIMutI	CAGTG	5 cut(s)	417, 457, 799, 931, 1434
BveI	ACCTGC	2 cut(s)	688, 811
Cac8I	GCNNGC	2 cut(s)	739, 1044
CaiI	CAGNNNCTG	2 cut(s)	1292, 1514
Cfr13I	GGNCC	3 cut(s)	755, 1208, 1346
CseI	GACGC	1 cut(s)	1043
Csp6I	GTAC	1 cut(s)	32
CspCI	CAANNNNNGTGG	2 cut(s)	733, 768
CviAII	CATG	6 cut(s)	35, 46, 1043, 1142, 1252, 1369
CviQI	GTAC	1 cut(s)	32
DdeI	CTNAG	3 cut(s)	191, 317, 537
DpnI	GATC	8 cut(s)	238, 387, 818, 942, 1155, 1366, 1392, 1518
DpnII	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
Eam1104I	CTCTTC	2 cut(s)	367, 1488
EarI	CTCTTC	2 cut(s)	367, 1488
Eco130I	CCWWGG	3 cut(s)	45, 1173, 1350
Eco31I	GGTCTC	1 cut(s)	461
Eco47I	GGWCC	3 cut(s)	755, 1208, 1346
Eco57I	CTGAAG	4 cut(s)	205, 907, 1003, 1269
Eco81I	CCTNAGG	1 cut(s)	537
Eco88I	CYCGRG	1 cut(s)	809
EcoRII	CCWGG	1 cut(s)	748
EcoT14I	CCWWGG	3 cut(s)	45, 1173, 1350
EcoT22I	ATGCAT	1 cut(s)	1044
ErhI	CCWWGG	3 cut(s)	45, 1173, 1350
FaeI	CATG	6 cut(s)	38, 49, 1046, 1145, 1255, 1372
FaqI	GGGAC	1 cut(s)	1332
FatI	CATG	6 cut(s)	34, 45, 1042, 1141, 1251, 1368
FauI	CCCGC	1 cut(s)	1481
FauNDI	CATATG	2 cut(s)	1168, 1543
FblI	GTMKAC	1 cut(s)	1185
Fnu4HI	GCNGC	6 cut(s)	348, 533, 600, 624, 1224, 1308
FokI	GGATG	4 cut(s)	1134, 1250, 1478, 1510
Fsp4HI	GCNGC	6 cut(s)	348, 533, 600, 624, 1224, 1308
FspBI	CTAG	1 cut(s)	1227
GluI	GCNGC	6 cut(s)	348, 533, 600, 624, 1224, 1308
GsaI	CCCAGC	1 cut(s)	1473
GsuI	CTGGAG	1 cut(s)	1148
HaeIII	GGCC	2 cut(s)	251, 713
HapII	CCGG	3 cut(s)	944, 1100, 1339
HgaI	GACGC	1 cut(s)	1043
Hin1II	CATG	6 cut(s)	38, 49, 1046, 1145, 1255, 1372
HincII	GTYRAC	4 cut(s)	675, 800, 886, 1186
HindII	GTYRAC	4 cut(s)	675, 800, 886, 1186
HindIII	AAGCTT	2 cut(s)	1267, 1412
HinfI	GANTC	9 cut(s)	68, 508, 524, 666, 812, 1000, 1103, 1255, 1289
HpaII	CCGG	3 cut(s)	944, 1100, 1339
HphI	GGTGA	4 cut(s)	328, 481, 584, 1253
Hpy166II	GTNNAC	7 cut(s)	82, 675, 755, 800, 886, 1186, 1385
Hpy188III	TCNNGA	6 cut(s)	171, 400, 593, 1100, 1127, 1151
Hpy8I	GTNNAC	7 cut(s)	82, 675, 755, 800, 886, 1186, 1385
HpyAV	CCTTC	7 cut(s)	215, 229, 311, 425, 656, 703, 1293
HpyCH4III	ACNGT	5 cut(s)	379, 635, 794, 966, 1011
HpyCH4IV	ACGT	1 cut(s)	30
HpyF10VI	GCNNNNNNNGC	6 cut(s)	689, 875, 1043, 1304, 1313, 1322
HpyF3I	CTNAG	3 cut(s)	191, 317, 537
HpySE526I	ACGT	1 cut(s)	30
Hsp92II	CATG	6 cut(s)	38, 49, 1046, 1145, 1255, 1372
Kpn2I	TCCGGA	1 cut(s)	1099
Kzo9I	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
LmnI	GCTCC	1 cut(s)	1091
Lsp1109I	GCAGC	3 cut(s)	586, 1210, 1319
LweI	GCATC	2 cut(s)	405, 1456
MaeI	CTAG	1 cut(s)	1227
MaeII	ACGT	1 cut(s)	30
MaeIII	GTNAC	3 cut(s)	581, 1048, 1276
MalI	GATC	8 cut(s)	238, 387, 818, 942, 1155, 1366, 1392, 1518
MboI	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
MboII	GAAGA	7 cut(s)	105, 117, 354, 357, 451, 995, 1505
MfeI	CAATTG	1 cut(s)	426
MflI	RGATCY	2 cut(s)	940, 1153
MhlI	GDGCHC	1 cut(s)	1387
MlyI	GAGTC	3 cut(s)	821, 1009, 1283
MmeI	TCCRAC	2 cut(s)	948, 1421
Mph1103I	ATGCAT	1 cut(s)	1044
MroI	TCCGGA	1 cut(s)	1099
MroXI	GAANNNNTTC	2 cut(s)	1326, 1510
MseI	TTAA	6 cut(s)	108, 405, 588, 777, 783, 996
MslI	CAYNNNNRTG	1 cut(s)	1076
MspI	CCGG	3 cut(s)	944, 1100, 1339
MspR9I	CCNGG	2 cut(s)	750, 1340
MunI	CAATTG	1 cut(s)	426
Mva1269I	GAATGC	1 cut(s)	96
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	1 cut(s)	1529
MwoI	GCNNNNNNNGC	6 cut(s)	689, 875, 1043, 1304, 1313, 1322
NciI	CCSGG	1 cut(s)	1340
NcoI	CCATGG	1 cut(s)	45
NdeI	CATATG	2 cut(s)	1168, 1543
NdeII	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
NlaIII	CATG	6 cut(s)	38, 49, 1046, 1145, 1255, 1372
NlaIV	GGNNCC	5 cut(s)	414, 448, 1093, 1348, 1431
NmuCI	GTSAC	1 cut(s)	1276
NsiI	ATGCAT	1 cut(s)	1044
NspI	RCATGY	2 cut(s)	38, 1046
PaeI	GCATGC	1 cut(s)	1046
PaqCI	CACCTGC	1 cut(s)	688
PciI	ACATGT	1 cut(s)	34
PctI	GAATGC	1 cut(s)	96
PdmI	GAANNNNTTC	2 cut(s)	1326, 1510
PfeI	GAWTC	6 cut(s)	68, 508, 524, 666, 1103, 1255
PflMI	CCANNNNNTGG	2 cut(s)	1379, 1440
PkrI	GCNGC	6 cut(s)	349, 534, 601, 625, 1225, 1309
PleI	GAGTC	3 cut(s)	820, 1008, 1283
PpsI	GAGTC	3 cut(s)	820, 1008, 1283
PscI	ACATGT	1 cut(s)	34
PshBI	ATTAAT	1 cut(s)	405
Psp6I	CCWGG	1 cut(s)	748
PspFI	CCCAGC	1 cut(s)	1469
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	5 cut(s)	414, 448, 1093, 1348, 1431
PspPI	GGNCC	3 cut(s)	755, 1208, 1346
PstI	CTGCAG	1 cut(s)	694
PstNI	CAGNNNCTG	2 cut(s)	1292, 1514
PsuI	RGATCY	2 cut(s)	940, 1153
RsaI	GTAC	1 cut(s)	33
RsaNI	GTAC	1 cut(s)	32
RseI	CAYNNNNRTG	1 cut(s)	1076
SalI	GTCGAC	1 cut(s)	1184
SaqAI	TTAA	6 cut(s)	108, 405, 588, 777, 783, 996
SatI	GCNGC	6 cut(s)	348, 533, 600, 624, 1224, 1308
Sau3AI	GATC	8 cut(s)	236, 385, 816, 940, 1153, 1364, 1390, 1516
Sau96I	GGNCC	3 cut(s)	755, 1208, 1346
SchI	GAGTC	3 cut(s)	821, 1009, 1283
ScrFI	CCNGG	2 cut(s)	750, 1340
SduI	GDGCHC	1 cut(s)	1387
SfaNI	GCATC	2 cut(s)	405, 1456
SfcI	CTRYAG	2 cut(s)	690, 1007
SinI	GGWCC	3 cut(s)	755, 1208, 1346
SmiMI	CAYNNNNRTG	1 cut(s)	1076
SmlI	CTYRAG	1 cut(s)	169
SmoI	CTYRAG	1 cut(s)	169
SphI	GCATGC	1 cut(s)	1046
SsiI	CCGC	6 cut(s)	305, 348, 533, 624, 1488, 1527
SspMI	CTAG	1 cut(s)	1227
StyD4I	CCNGG	2 cut(s)	748, 1338
StyI	CCWWGG	3 cut(s)	45, 1173, 1350
TaaI	ACNGT	5 cut(s)	379, 635, 794, 966, 1011
TaiI	ACGT	1 cut(s)	33
TaqI	TCGA	4 cut(s)	815, 1185, 1363, 1519
TauI	GCSGC	3 cut(s)	350, 535, 626
TfiI	GAWTC	6 cut(s)	68, 508, 524, 666, 1103, 1255
Tru1I	TTAA	6 cut(s)	108, 405, 588, 777, 783, 996
Tru9I	TTAA	6 cut(s)	108, 405, 588, 777, 783, 996
TscAI	CASTG	5 cut(s)	424, 457, 799, 931, 1441
TseFI	GTSAC	1 cut(s)	1276
TseI	GCWGC	3 cut(s)	599, 1223, 1307
Tsp45I	GTSAC	1 cut(s)	1276
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	1 cut(s)	849
TspRI	CASTG	5 cut(s)	424, 457, 799, 931, 1441
Van91I	CCANNNNNTGG	2 cut(s)	1379, 1440
VneI	GTGCAC	1 cut(s)	1383
VpaK11BI	GGWCC	3 cut(s)	755, 1208, 1346
VspI	ATTAAT	1 cut(s)	405
XapI	RAATTY	2 cut(s)	12, 645
XceI	RCATGY	2 cut(s)	38, 1046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	749
XmiI	GTMKAC	1 cut(s)	1185
XmnI	GAANNNNTTC	2 cut(s)	1326, 1510
XspI	CTAG	1 cut(s)	1227
Zsp2I	ATGCAT	1 cut(s)	1044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.