Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0008602

Physical Location & Seq

Genomic Coordinates Forward (+)

19479620 .. 19484706

Gene Structure 5087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g21460.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGGGGAGCGTTGGAGAGGTCGGAGAAGGGCGGGTGTTGTCGGATGTGGAGGAGACTATATTTGTTGCGGTGGGGAAGGACTTGAAGCAGAGCGAAACGACGCTGGCTTGGGCGGTGAAGAACTTCGCCGGGAAGAGGATTTGCCTGCTACATGTTCACAAACCTTCTCTCCTACTTTCGCTGTCAGAAGGGATCGGTTCTGCTAGTAAATTGAAACAAGGAGCAGTTAAGGCGTTACAGGGAGCTGAGAGGACGAAATTACGAAAGCTTCTAGATCAATACCGAATGGTTCTCACCGGAGCGGGGGTGGAGGCAAATGAATTATGGATTGAGATGGGAAATGTCGAAGAGGGAATTGTCGAAATAATTGCTCGGCACCATATTAGATGGCTCGTCATGGGGGCAGCTGCAGATGAACATTATTCTGAGAGATTGGCTGAGATAAAATCCAGGAAAGCATTTTTCGTATGCCAAAAGGCAGCTAGTTCCTGTCATATTTGGTTTGTTTGTAAGGGGCACCTCATATATACAAGGGGAGATAGAGAAGATGAATCTGAAATAGAAATTGCCCCTCCTCTGCTGCTGATGAATTCGGCTTTTGGAACCGAGCAACCAGAACACTTAAGATCAGAATCAACTGATTCGCTGAGAAATCTGAGCTCTGCAGATGCTGAGGAAGATACCAGCGAGTTGGAAGAAATATCAGGGAGGTCGACCCTGTTGATGATAGATGCGGAGGGAGAAGCAAATGGTGAAAGTTCTCATAGCGTAGAACAAGCCATTGTGGATACTAAGAACTTAAAACAGAAGGAATTTGAACAGACAACTAGGCGGTGGAAAGACGAAGATGATGAGATGGAGGCTAAATGCAAGAAAGTTTGTGTTGTCCATGCCTTCTTACAGGCCAAAGCATTTGAAAGTTTATGCACTAAGGAGATGAGCCAAAGAAAAGAGATGGAAGAAAAGCTTGCTAGATTAAAGCAAGAAATAGACGGGGTGAAAGATGAGAGTGAGGAATTTATAAGACAACTCTCGATGGTTGAGGACAAGAAGTTAGTGCTGGAGAAACAACTAGAAGCATCACAATGTGAGGTAAGGGAGTTAGAGGAGAAAATCATCTCAGCTGCAGGGCTCTTGATGAGTTTCAGGGAAAAACGGGATACAATGAAGATAGAGCATAGAAATGCAATTAGAAAGGTCAGACGGCTAGAGACAATGATAAATGGGGAAGCTGCAAGCTTTGATCAGGCAGAATTCCCTATCTTCTCTTTTATGGAGATCAACGAGGCAACTCACAACTTTGATCCATCCTGGAAGATTAAAGAAGGAAGACGCGGAAGTGTTTATAAAGGGATTCTTCGCCACATGCATGTTGCTATTAAGATGTTGCCTTCTTATGGTTCTAAAACTCAATTGGACTTTGAACACGAGGTAGAGGTCTTGAGCAGAGTGCGGCATCCAAACTTGGTAACACTAATTGGAACCTGTCCGGAATCCAGGTCACTTGTATATGAGTACCTAAAGAATGGCTGCCTTGAAGACCTCCTTGCCTGCAAAGACAGCACCCCACCTCTTCCATGGCAAATTCGAACGTCCATTGCTACAGAGATATGCTCTGCCCTCATATTCCTTCACTCAAACATTCCTTGTCTTGTCCATGGGAACTTGAAACCCAGTAACATTCTTTTTGATGCGAACTTTGTGAGCAAACTTATAAATTTGGGCATCAATTCTTTGATCCCACAGAACGAAAACCCGACCAACTTCACCAAAATATGCAGTGACCCAAATGGAGCTCATGTGTATATGGATCCAGAGTATCTTGAAACTGGAAAACTCACACCAGAATCTGATGTTTACTCATTCGGGATTATACTGTTGCAACTTTTAACTGCAAGACCGCTTTCAGGATTAGTGAAGGATGTGAAATACGCGTTAGAAAATGACAACTTCAAAGCATTGCTGGACGTTTCAGCCGGAGACTGGCCACTAGAGCAAGCAAAAGAGATGGCTTACATAGCACTGAGGTGCTGCGAGAACAAGCGCTTGGATCGGCTAGACCTATTGGTTGCCCACGAGGCAATGAGAGCTTCATGCGCTGCCTCAGCATCGTGCTTGGTTTCCAAGAAGCTTATTCGGACACCATCTCATTTCCTCTGCCCCATCCTGCAGGAAGTCATGCAAGATCCACAAATTGCAGCAGATGGTTTCACATACGAAGAAGAAGCGATACGAGGATGGCTGAAAAGCGGCCACAACACGTCGCCGATGACAAATCTTGAGCTCGAACACTGCAAATTGGTCCCCAATTATGCCCTTCAGTATGCAATTCAACAGTGGCAACTACAGTTTCTCCTACCGTTTGGTACGTGGGACGGGACGGAACAGAGTGGGACAAGGCGTTCCGTCCCACGTTTGGTGCGCCTAAAACGGGTGGAACGAGCTGTTCCACGGGACGAGTTTTTGGTGAATTTTCGTTCCACCTCACCCCCCTGGAACGACTCGTTCCACATCCGTGGAACACAAAATTATAACATCTCCGTCTCCTTCTTCTTCCTCCTTGTTTCCATCCGAGGGCATCTTTGCTCTCGCTCCGTTCCGTTCCGTCCTGTCCCGTCCCGTCCCGTCCCATTCCGTCCCGTCCCGTCTGCATACCAAACGATACCCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

891

Amino Acids

100.58

Weight (kDa)

5.99

Isoelectric Point (pI)

50.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49060 AT3G49060 AT3G49060
fragaria_vesca	FvH4_7g29840 FvH4_7g29840 FvH4_7g29840 FvH4_7g29840 FvH4_7g29840 FvH4_7g29840
malus_domestica	MD01G1205000.v1.1
prunus_persica	Prupe.2G297400_v2.0.a1
pyrus_communis	pycom01g21460
rosa_chinensis	RchiOBHm_Chr1g0377811
rosa_laevigata	RLG00000026496
rosa_multiflora	Rmu_co8492821.1_g000001 Rmu_sc0004824.1_g000003
rosa_roxburghii	Rroxscaffold_4G00281040
rosa_rugosa	Rorug01G0405200
rosa_samantha	Rh1AG427100 Rh1BG382200 Rh1CG396100 Rh1DG413200
rosa_wichuraiana	Rw1G037150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1022, 1347, 1715, 2532
AccB1I	GGYRCC	2 cut(s)	375, 516
AccBSI	CCGCTC	1 cut(s)	302
AccI	GTMKAC	1 cut(s)	713
AccII	CGCG	2 cut(s)	1335, 1934
AccIII	TCCGGA	1 cut(s)	1489
AclWI	GGATC	7 cut(s)	200, 1298, 1732, 1805, 1818, 2058, 2180
AcoI	YGGCCR	2 cut(s)	1985, 2251
AcsI	RAATTY	7 cut(s)	589, 812, 1016, 1253, 1584, 1717, 2470
AcuI	CTGAAG	1 cut(s)	2303
AdeI	CACNNNGTG	1 cut(s)	1088
AfaI	GTAC	2 cut(s)	1517, 2368
AfeI	AGCGCT	1 cut(s)	2045
AfiI	CCNNNNNNNGG	8 cut(s)	135, 303, 1397, 1907, 1983, 2416, 2431, 2574
AflII	CTTAAG	1 cut(s)	622
AflIII	ACRYGT	3 cut(s)	151, 1932, 2259
AjiI	CACGTC	1 cut(s)	2262
AjnI	CCWGG	4 cut(s)	449, 1310, 1496, 2492
AjuI	GAANNNNNNNTTGG	2 cut(s)	2030, 2062
AleI	CACNNNNGTG	2 cut(s)	2026, 2514
AloI	GAACNNNNNNTCC	2 cut(s)	2386, 2418
Alw21I	GWGCWC	3 cut(s)	662, 1798, 2286
Alw26I	GTCTC	4 cut(s)	47, 1205, 1974, 2548
AlwI	GGATC	7 cut(s)	200, 1298, 1732, 1805, 1818, 2058, 2180
AlwNI	CAGNNNCTG	2 cut(s)	671, 1850
Aor13HI	TCCGGA	1 cut(s)	1489
Aor51HI	AGCGCT	1 cut(s)	2045
AoxI	GGCC	3 cut(s)	903, 1985, 2251
ApoI	RAATTY	7 cut(s)	589, 812, 1016, 1253, 1584, 1717, 2470
Asp700I	GAANNNNTTC	1 cut(s)	122
AspLEI	GCGC	3 cut(s)	2046, 2099, 2424
AspS9I	GGNCC	1 cut(s)	2302
AsuC2I	CCSGG	1 cut(s)	130
AsuHPI	GGTGA	7 cut(s)	127, 286, 764, 1009, 1759, 2478, 2479
AsuII	TTCGAA	1 cut(s)	1588
AvaII	GGWCC	1 cut(s)	2302
BaeGI	GKGCMC	1 cut(s)	519
BaeI	ACNNNNGTAYC	1 cut(s)	2654
BalI	TGGCCA	1 cut(s)	1987
BamHI	GGATCC	1 cut(s)	1810
BanI	GGYRCC	2 cut(s)	375, 516
BanII	GRGCYC	4 cut(s)	662, 1134, 1798, 2286
BarI	GAAGNNNNNNTAC	2 cut(s)	2214, 2246
BauI	CACGAG	2 cut(s)	1427, 2075
BbsI	GAAGAC	2 cut(s)	1336, 1545
Bbv12I	GWGCWC	3 cut(s)	662, 1798, 2286
BbvCI	CCTCAGC	2 cut(s)	672, 2104
BceAI	ACGGC	1 cut(s)	1220
BcgI	CGANNNNNNTGC	2 cut(s)	350, 384
BciT130I	CCWGG	4 cut(s)	451, 1312, 1498, 2494
BciVI	GTATCC	2 cut(s)	781, 1153
BclI	TGATCA	1 cut(s)	1243
BcnI	CCSGG	1 cut(s)	130
BcoDI	GTCTC	4 cut(s)	47, 1205, 1974, 2548
BfaI	CTAG	9 cut(s)	204, 272, 483, 828, 972, 1073, 1208, 1991, 2057
BfmI	CTRYAG	6 cut(s)	408, 663, 1125, 1602, 2168, 2345
BfoI	RGCGCY	1 cut(s)	2047
BfrI	CTTAAG	1 cut(s)	622
BfuI	GTATCC	2 cut(s)	781, 1153
BglI	GCCNNNNNGGC	1 cut(s)	2078
Bme1390I	CCNGG	5 cut(s)	130, 451, 1312, 1498, 2494
Bme18I	GGWCC	1 cut(s)	2302
BmgBI	CACGTC	1 cut(s)	2262
BmgT120I	GGNCC	1 cut(s)	2302
BmiI	GGNNCC	6 cut(s)	377, 518, 604, 1483, 1812, 2304
BmrFI	CCNGG	5 cut(s)	130, 451, 1312, 1498, 2494
BmrI	ACTGGG	2 cut(s)	1668, 2662
BmsI	GCATC	8 cut(s)	658, 721, 1088, 1465, 1681, 1734, 2117, 2587
BmuI	ACTGGG	2 cut(s)	1668, 2662
BpiI	GAAGAC	2 cut(s)	1336, 1545
BplI	GAGNNNNNCTC	2 cut(s)	1598, 1630
BpmI	CTGGAG	1 cut(s)	1082
Bpu10I	CCTNAGC	2 cut(s)	672, 2104
Bpu14I	TTCGAA	1 cut(s)	1588
BpuEI	CTTGAG	2 cut(s)	1462, 2300
BpuMI	CCSGG	1 cut(s)	130
BsaAI	YACGTR	1 cut(s)	2370
BsaBI	GATNNNNATC	1 cut(s)	631
BsaJI	CCNNGG	6 cut(s)	1577, 1657, 2450, 2492, 2515, 2572
BsaWI	WCCGGW	2 cut(s)	296, 1489
BsaXI	ACNNNNNCTCC	8 cut(s)	153, 183, 291, 321, 1785, 1815, 2337, 2367
Bsc4I	CCNNNNNNNGG	8 cut(s)	135, 303, 1397, 1907, 1983, 2416, 2431, 2574
Bse1I	ACTGG	4 cut(s)	1674, 1834, 1988, 2668
Bse3DI	GCAATG	3 cut(s)	1596, 1958, 2088
Bse8I	GATNNNNATC	1 cut(s)	631
BseAI	TCCGGA	1 cut(s)	1489
BseBI	CCWGG	4 cut(s)	451, 1312, 1498, 2494
BseDI	CCNNGG	6 cut(s)	1577, 1657, 2450, 2492, 2515, 2572
BseGI	GGATG	8 cut(s)	49, 1307, 1456, 1927, 2163, 2243, 2511, 2568
BseJI	GATNNNNATC	1 cut(s)	631
BseLI	CCNNNNNNNGG	8 cut(s)	135, 303, 1397, 1907, 1983, 2416, 2431, 2574
BseMI	GCAATG	3 cut(s)	1596, 1958, 2088
BseMII	CTCAG	9 cut(s)	237, 417, 429, 638, 647, 663, 1134, 2015, 2118
BseNI	ACTGG	4 cut(s)	1674, 1834, 1988, 2668
BseRI	GAGGAG	3 cut(s)	65, 564, 1121
BseSI	GKGCMC	1 cut(s)	519
Bsh1236I	CGCG	2 cut(s)	1335, 1934
BshFI	GGCC	3 cut(s)	905, 1987, 2253
BshNI	GGYRCC	2 cut(s)	375, 516
BsiHKAI	GWGCWC	3 cut(s)	662, 1798, 2286
BsiSI	CCGG	4 cut(s)	129, 297, 1490, 1977
BslI	CCNNNNNNNGG	8 cut(s)	135, 303, 1397, 1907, 1983, 2416, 2431, 2574
BsmAI	GTCTC	4 cut(s)	47, 1205, 1974, 2548
BsmBI	CGTCTC	1 cut(s)	2548
BsnI	GGCC	3 cut(s)	905, 1987, 2253
Bsp119I	TTCGAA	1 cut(s)	1588
Bsp1286I	GDGCHC	5 cut(s)	519, 662, 1134, 1798, 2286
Bsp13I	TCCGGA	1 cut(s)	1489
Bsp19I	CCATGG	2 cut(s)	1577, 1657
BspANI	GGCC	3 cut(s)	905, 1987, 2253
BspCNI	CTCAG	9 cut(s)	238, 418, 430, 639, 648, 664, 1133, 2016, 2117
BspEI	TCCGGA	1 cut(s)	1489
BspFNI	CGCG	2 cut(s)	1335, 1934
BspLI	GGNNCC	6 cut(s)	377, 518, 604, 1483, 1812, 2304
BspMAI	CTGCAG	4 cut(s)	412, 667, 1129, 2172
BspPI	GGATC	7 cut(s)	200, 1298, 1732, 1805, 1818, 2058, 2180
BspT104I	TTCGAA	1 cut(s)	1588
BspT107I	GGYRCC	2 cut(s)	375, 516
BspTI	CTTAAG	1 cut(s)	622
BsrBI	CCGCTC	1 cut(s)	302
BsrDI	GCAATG	3 cut(s)	1596, 1958, 2088
BsrI	ACTGG	4 cut(s)	1674, 1834, 1988, 2668
BssECI	CCNNGG	6 cut(s)	1577, 1657, 2450, 2492, 2515, 2572
BssSI	CACGAG	2 cut(s)	1427, 2075
BssT1I	CCWWGG	2 cut(s)	1577, 1657
Bst2BI	CACGAG	2 cut(s)	1427, 2075
Bst2UI	CCWGG	4 cut(s)	451, 1312, 1498, 2494
Bst4CI	ACNGT	4 cut(s)	1878, 2337, 2349, 2361
Bst6I	CTCTTC	3 cut(s)	128, 342, 1578
BstAFI	CTTAAG	1 cut(s)	622
BstBAI	YACGTR	1 cut(s)	2370
BstBI	TTCGAA	1 cut(s)	1588
BstC8I	GCNNGC	6 cut(s)	105, 146, 969, 1237, 1552, 1998
BstDSI	CCRYGG	4 cut(s)	1577, 1657, 2450, 2515
BstF5I	GGATG	8 cut(s)	49, 1307, 1456, 1927, 2163, 2243, 2511, 2568
BstFNI	CGCG	2 cut(s)	1335, 1934
BstH2I	RGCGCY	1 cut(s)	2047
BstHHI	GCGC	3 cut(s)	2046, 2099, 2424
BstMAI	GTCTC	4 cut(s)	47, 1205, 1974, 2548
BstMWI	GCNNNNNNNGC	8 cut(s)	230, 1560, 1993, 2018, 2078, 2087, 2096, 2105
BstNI	CCWGG	4 cut(s)	451, 1312, 1498, 2494
BstNSI	RCATGY	3 cut(s)	155, 1369, 1373
BstSCI	CCNGG	5 cut(s)	128, 449, 1310, 1496, 2492
BstSFI	CTRYAG	6 cut(s)	408, 663, 1125, 1602, 2168, 2345
BstSLI	GKGCMC	1 cut(s)	519
BstUI	CGCG	2 cut(s)	1335, 1934
BstV2I	GAAGAC	2 cut(s)	1336, 1545
BstX2I	RGATCY	2 cut(s)	1810, 2185
BstXI	CCANNNNNNTGG	2 cut(s)	691, 2516
BstYI	RGATCY	2 cut(s)	1810, 2185
BsuI	GTATCC	2 cut(s)	781, 1153
BsuRI	GGCC	3 cut(s)	905, 1987, 2253
BtgI	CCRYGG	4 cut(s)	1577, 1657, 2450, 2515
BtrI	CACGTC	1 cut(s)	2262
BtsCI	GGATG	8 cut(s)	49, 1307, 1456, 1927, 2163, 2243, 2511, 2568
BtsI	GCAGTG	2 cut(s)	1786, 2290
BtsIMutI	CAGTG	4 cut(s)	1786, 2021, 2290, 2342
Cac8I	GCNNGC	6 cut(s)	105, 146, 969, 1237, 1552, 1998
CaiI	CAGNNNCTG	2 cut(s)	671, 1850
CfoI	GCGC	3 cut(s)	2046, 2099, 2424
Cfr13I	GGNCC	1 cut(s)	2302
CseI	GACGC	2 cut(s)	109, 1341
Csp6I	GTAC	2 cut(s)	1516, 2367
CviQI	GTAC	2 cut(s)	1516, 2367
DraIII	CACNNNGTG	1 cut(s)	1088
EaeI	YGGCCR	2 cut(s)	1985, 2251
Eam1104I	CTCTTC	3 cut(s)	128, 342, 1578
EarI	CTCTTC	3 cut(s)	128, 342, 1578
Ecl136II	GAGCTC	3 cut(s)	660, 1796, 2284
Eco130I	CCWWGG	2 cut(s)	1577, 1657
Eco24I	GRGCYC	4 cut(s)	662, 1134, 1798, 2286
Eco47I	GGWCC	1 cut(s)	2302
Eco47III	AGCGCT	1 cut(s)	2045
Eco53kI	GAGCTC	3 cut(s)	660, 1796, 2284
Eco57I	CTGAAG	1 cut(s)	2303
EcoICRI	GAGCTC	3 cut(s)	660, 1796, 2284
EcoRI	GAATTC	2 cut(s)	589, 1253
EcoRII	CCWGG	4 cut(s)	449, 1310, 1496, 2492
EcoT14I	CCWWGG	2 cut(s)	1577, 1657
EcoT22I	ATGCAT	1 cut(s)	1371
EcoT38I	GRGCYC	4 cut(s)	662, 1134, 1798, 2286
ErhI	CCWWGG	2 cut(s)	1577, 1657
Esp3I	CGTCTC	1 cut(s)	2548
FalI	AAGNNNNNCTT	6 cut(s)	951, 983, 1341, 1373, 1530, 1562
FauI	CCCGC	2 cut(s)	24, 295
FbaI	TGATCA	1 cut(s)	1243
FblI	GTMKAC	1 cut(s)	713
FokI	GGATG	8 cut(s)	56, 1294, 1443, 1934, 2150, 2250, 2498, 2555
FriOI	GRGCYC	4 cut(s)	662, 1134, 1798, 2286
FspBI	CTAG	9 cut(s)	204, 272, 483, 828, 972, 1073, 1208, 1991, 2057
GlaI	GCGC	3 cut(s)	2045, 2098, 2423
GsuI	CTGGAG	1 cut(s)	1082
HaeII	RGCGCY	1 cut(s)	2047
HaeIII	GGCC	3 cut(s)	905, 1987, 2253
HapII	CCGG	4 cut(s)	129, 297, 1490, 1977
HgaI	GACGC	2 cut(s)	109, 1341
HhaI	GCGC	3 cut(s)	2046, 2099, 2424
Hin6I	GCGC	3 cut(s)	2044, 2097, 2422
HinP1I	GCGC	3 cut(s)	2044, 2097, 2422
HincII	GTYRAC	1 cut(s)	714
HindII	GTYRAC	1 cut(s)	714
HindIII	AAGCTT	4 cut(s)	266, 965, 1237, 2129
HinfI	GANTC	7 cut(s)	551, 632, 641, 1354, 1493, 1847, 2501
HpaII	CCGG	4 cut(s)	129, 297, 1490, 1977
HphI	GGTGA	7 cut(s)	127, 286, 764, 1009, 1759, 2478, 2479
Hpy166II	GTNNAC	3 cut(s)	157, 714, 1858
Hpy8I	GTNNAC	3 cut(s)	157, 714, 1858
Hpy99I	CGWCG	2 cut(s)	103, 2266
HpyCH4III	ACNGT	4 cut(s)	1878, 2337, 2349, 2361
HpyCH4IV	ACGT	5 cut(s)	1592, 1968, 2261, 2369, 2413
HpyF10VI	GCNNNNNNNGC	8 cut(s)	230, 1560, 1993, 2018, 2078, 2087, 2096, 2105
HpySE526I	ACGT	5 cut(s)	1592, 1968, 2261, 2369, 2413
HspAI	GCGC	3 cut(s)	2044, 2097, 2422
Kpn2I	TCCGGA	1 cut(s)	1489
Ksp22I	TGATCA	1 cut(s)	1243
LmnI	GCTCC	6 cut(s)	6, 221, 242, 299, 1793, 2597
LweI	GCATC	8 cut(s)	658, 721, 1088, 1465, 1681, 1734, 2117, 2587
MaeI	CTAG	9 cut(s)	204, 272, 483, 828, 972, 1073, 1208, 1991, 2057
MaeII	ACGT	5 cut(s)	1592, 1968, 2261, 2369, 2413
MaeIII	GTNAC	5 cut(s)	234, 1468, 1500, 1676, 1781
MbiI	CCGCTC	1 cut(s)	302
MfeI	CAATTG	1 cut(s)	1412
MflI	RGATCY	2 cut(s)	1810, 2185
MhlI	GDGCHC	5 cut(s)	519, 662, 1134, 1798, 2286
MlsI	TGGCCA	1 cut(s)	1987
MluI	ACGCGT	1 cut(s)	1932
MluNI	TGGCCA	1 cut(s)	1987
MlyI	GAGTC	1 cut(s)	2495
MmeI	TCCRAC	2 cut(s)	21, 672
Mox20I	TGGCCA	1 cut(s)	1987
Mph1103I	ATGCAT	1 cut(s)	1371
MroI	TCCGGA	1 cut(s)	1489
MroXI	GAANNNNTTC	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	1987
MseI	TTAA	7 cut(s)	228, 623, 800, 977, 1320, 1380, 1889
MslI	CAYNNNNRTG	5 cut(s)	1084, 1182, 1368, 2026, 2514
Msp20I	TGGCCA	1 cut(s)	1987
MspA1I	CMGCKG	2 cut(s)	407, 1124
MspCI	CTTAAG	1 cut(s)	622
MspI	CCGG	4 cut(s)	129, 297, 1490, 1977
MspR9I	CCNGG	5 cut(s)	130, 451, 1312, 1498, 2494
MunI	CAATTG	1 cut(s)	1412
MvaI	CCWGG	4 cut(s)	451, 1312, 1498, 2494
MvnI	CGCG	2 cut(s)	1335, 1934
MwoI	GCNNNNNNNGC	8 cut(s)	230, 1560, 1993, 2018, 2078, 2087, 2096, 2105
NciI	CCSGG	1 cut(s)	130
NcoI	CCATGG	2 cut(s)	1577, 1657
NlaIV	GGNNCC	6 cut(s)	377, 518, 604, 1483, 1812, 2304
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	2 cut(s)	1500, 1781
NsiI	ATGCAT	1 cut(s)	1371
NspI	RCATGY	3 cut(s)	155, 1369, 1373
NspV	TTCGAA	1 cut(s)	1588
OliI	CACNNNNGTG	2 cut(s)	2026, 2514
PciI	ACATGT	1 cut(s)	151
PcsI	WCGNNNNNNNCGW	1 cut(s)	2437
PdmI	GAANNNNTTC	1 cut(s)	122
PfeI	GAWTC	6 cut(s)	551, 632, 641, 1354, 1493, 1847
PfoI	TCCNGGA	2 cut(s)	449, 1310
PleI	GAGTC	1 cut(s)	2495
PpsI	GAGTC	1 cut(s)	2495
Ppu21I	YACGTR	1 cut(s)	2370
PscI	ACATGT	1 cut(s)	151
PsiI	TTATAA	4 cut(s)	1022, 1347, 1715, 2532
Psp124BI	GAGCTC	3 cut(s)	662, 1798, 2286
Psp6I	CCWGG	4 cut(s)	449, 1310, 1496, 2492
PspGI	CCWGG	4 cut(s)	449, 1310, 1496, 2492
PspN4I	GGNNCC	6 cut(s)	377, 518, 604, 1483, 1812, 2304
PspPI	GGNCC	1 cut(s)	2302
PstI	CTGCAG	4 cut(s)	412, 667, 1129, 2172
PstNI	CAGNNNCTG	2 cut(s)	671, 1850
PsuI	RGATCY	2 cut(s)	1810, 2185
PvuII	CAGCTG	2 cut(s)	407, 1124
RsaI	GTAC	2 cut(s)	1517, 2368
RsaNI	GTAC	2 cut(s)	1516, 2367
RseI	CAYNNNNRTG	5 cut(s)	1084, 1182, 1368, 2026, 2514
SacI	GAGCTC	3 cut(s)	662, 1798, 2286
SalI	GTCGAC	1 cut(s)	712
SaqAI	TTAA	7 cut(s)	228, 623, 800, 977, 1320, 1380, 1889
Sau96I	GGNCC	1 cut(s)	2302
SbfI	CCTGCAGG	1 cut(s)	2172
SchI	GAGTC	1 cut(s)	2495
ScrFI	CCNGG	5 cut(s)	130, 451, 1312, 1498, 2494
SdaI	CCTGCAGG	1 cut(s)	2172
SduI	GDGCHC	5 cut(s)	519, 662, 1134, 1798, 2286
SfaNI	GCATC	8 cut(s)	658, 721, 1088, 1465, 1681, 1734, 2117, 2587
SfcI	CTRYAG	6 cut(s)	408, 663, 1125, 1602, 2168, 2345
SfuI	TTCGAA	1 cut(s)	1588
SinI	GGWCC	1 cut(s)	2302
SmiMI	CAYNNNNRTG	5 cut(s)	1084, 1182, 1368, 2026, 2514
SmlI	CTYRAG	3 cut(s)	622, 1441, 2279
SmoI	CTYRAG	3 cut(s)	622, 1441, 2279
Sse8387I	CCTGCAGG	1 cut(s)	2172
SspMI	CTAG	9 cut(s)	204, 272, 483, 828, 972, 1073, 1208, 1991, 2057
SstI	GAGCTC	3 cut(s)	662, 1798, 2286
StyD4I	CCNGG	5 cut(s)	128, 449, 1310, 1496, 2492
StyI	CCWWGG	2 cut(s)	1577, 1657
TaaI	ACNGT	4 cut(s)	1878, 2337, 2349, 2361
TaiI	ACGT	5 cut(s)	1595, 1971, 2264, 2372, 2416
TaqI	TCGA	6 cut(s)	345, 360, 713, 1034, 1588, 2286
TauI	GCSGC	2 cut(s)	1456, 2253
TfiI	GAWTC	6 cut(s)	551, 632, 641, 1354, 1493, 1847
Tru1I	TTAA	7 cut(s)	228, 623, 800, 977, 1320, 1380, 1889
Tru9I	TTAA	7 cut(s)	228, 623, 800, 977, 1320, 1380, 1889
TscAI	CASTG	4 cut(s)	1786, 2028, 2297, 2342
TseFI	GTSAC	2 cut(s)	1500, 1781
Tsp45I	GTSAC	2 cut(s)	1500, 1781
TspDTI	ATGAA	6 cut(s)	333, 429, 564, 602, 1181, 2082
TspGWI	ACGGA	8 cut(s)	2395, 2396, 2504, 2530, 2584, 2589, 2594, 2624
TspRI	CASTG	4 cut(s)	1786, 2028, 2297, 2342
Vha464I	CTTAAG	1 cut(s)	622
VpaK11BI	GGWCC	1 cut(s)	2302
XapI	RAATTY	7 cut(s)	589, 812, 1016, 1253, 1584, 1717, 2470
XbaI	TCTAGA	1 cut(s)	271
XceI	RCATGY	3 cut(s)	155, 1369, 1373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1575
XmiI	GTMKAC	1 cut(s)	713
XmnI	GAANNNNTTC	1 cut(s)	122
XspI	CTAG	9 cut(s)	204, 272, 483, 828, 972, 1073, 1208, 1991, 2057
Zsp2I	ATGCAT	1 cut(s)	1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.