Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1028000.v1.1 |
| pyrus_communis | pycom02g04040 pycom05g12120 pycom05g12150 pycom05g26230 pycom07g01210 pycom09g06540 pycom12g22520 pycom15g10860 pycom17g14480 pycom5153684g00420 |
| rosa_roxburghii | Rroxscaffold_3G00247620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 101, 277 |
| AciI | CCGC | 1 cut(s) | 275 |
| AcsI | RAATTY | 2 cut(s) | 25, 244 |
| AcuI | CTGAAG | 2 cut(s) | 124, 318 |
| AfaI | GTAC | 1 cut(s) | 283 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 119, 335 |
| AgsI | TTSAA | 3 cut(s) | 149, 177, 316 |
| AjnI | CCWGG | 2 cut(s) | 210, 289 |
| AluBI | AGCT | 2 cut(s) | 301, 312 |
| AluI | AGCT | 2 cut(s) | 301, 312 |
| AoxI | GGCC | 4 cut(s) | 110, 182, 207, 233 |
| ApeKI | GCWGC | 1 cut(s) | 309 |
| ApoI | RAATTY | 2 cut(s) | 25, 244 |
| AspS9I | GGNCC | 3 cut(s) | 111, 182, 208 |
| AsuHPI | GGTGA | 2 cut(s) | 226, 279 |
| BbsI | GAAGAC | 1 cut(s) | 316 |
| BbvI | GCAGC | 1 cut(s) | 321 |
| BciT130I | CCWGG | 2 cut(s) | 212, 291 |
| BfaI | CTAG | 1 cut(s) | 249 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BisI | GCNGC | 2 cut(s) | 275, 310 |
| BlsI | GCNGC | 2 cut(s) | 276, 311 |
| Bme1390I | CCNGG | 2 cut(s) | 212, 291 |
| BmgT120I | GGNCC | 3 cut(s) | 111, 182, 208 |
| BmrFI | CCNGG | 2 cut(s) | 212, 291 |
| BpiI | GAAGAC | 1 cut(s) | 316 |
| Bsa29I | ATCGAT | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 1 cut(s) | 210 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 119, 335 |
| BseBI | CCWGG | 2 cut(s) | 212, 291 |
| BseCI | ATCGAT | 1 cut(s) | 53 |
| BseDI | CCNNGG | 1 cut(s) | 210 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 119, 335 |
| BseMII | CTCAG | 1 cut(s) | 61 |
| BseXI | GCAGC | 1 cut(s) | 321 |
| Bsh1236I | CGCG | 2 cut(s) | 101, 277 |
| Bsh1285I | CGRYCG | 1 cut(s) | 57 |
| BshFI | GGCC | 4 cut(s) | 112, 184, 209, 235 |
| BshVI | ATCGAT | 1 cut(s) | 53 |
| BsiEI | CGRYCG | 1 cut(s) | 57 |
| BslFI | GGGAC | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 119, 335 |
| BsmFI | GGGAC | 1 cut(s) | 149 |
| BsnI | GGCC | 4 cut(s) | 112, 184, 209, 235 |
| Bsp143I | GATC | 3 cut(s) | 50, 54, 61 |
| BspACI | CCGC | 1 cut(s) | 275 |
| BspANI | GGCC | 4 cut(s) | 112, 184, 209, 235 |
| BspCNI | CTCAG | 1 cut(s) | 60 |
| BspDI | ATCGAT | 1 cut(s) | 53 |
| BspFNI | CGCG | 2 cut(s) | 101, 277 |
| BspMAI | CTGCAG | 1 cut(s) | 241 |
| BssECI | CCNNGG | 1 cut(s) | 210 |
| BssMI | GATC | 3 cut(s) | 50, 54, 61 |
| Bst2UI | CCWGG | 2 cut(s) | 212, 291 |
| Bst4CI | ACNGT | 1 cut(s) | 96 |
| Bst6I | CTCTTC | 2 cut(s) | 71, 337 |
| BstC8I | GCNNGC | 1 cut(s) | 237 |
| BstDEI | CTNAG | 1 cut(s) | 47 |
| BstFNI | CGCG | 2 cut(s) | 101, 277 |
| BstKTI | GATC | 3 cut(s) | 53, 57, 64 |
| BstMBI | GATC | 3 cut(s) | 50, 54, 61 |
| BstMCI | CGRYCG | 1 cut(s) | 57 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 232 |
| BstNI | CCWGG | 2 cut(s) | 212, 291 |
| BstSCI | CCNGG | 2 cut(s) | 210, 289 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstUI | CGCG | 2 cut(s) | 101, 277 |
| BstV1I | GCAGC | 1 cut(s) | 321 |
| BstV2I | GAAGAC | 1 cut(s) | 316 |
| Bsu15I | ATCGAT | 1 cut(s) | 53 |
| BsuRI | GGCC | 4 cut(s) | 112, 184, 209, 235 |
| BsuTUI | ATCGAT | 1 cut(s) | 53 |
| Cac8I | GCNNGC | 1 cut(s) | 237 |
| Cfr13I | GGNCC | 3 cut(s) | 111, 182, 208 |
| ClaI | ATCGAT | 1 cut(s) | 53 |
| CseI | GACGC | 1 cut(s) | 90 |
| CsiI | ACCWGGT | 1 cut(s) | 289 |
| Csp6I | GTAC | 1 cut(s) | 282 |
| CviJI | RGCY | 8 cut(s) | 112, 162, 184, 189, 209, 235, 301, 312 |
| CviKI_1 | RGCY | 8 cut(s) | 112, 162, 184, 189, 209, 235, 301, 312 |
| CviQI | GTAC | 1 cut(s) | 282 |
| DdeI | CTNAG | 1 cut(s) | 47 |
| DpnI | GATC | 3 cut(s) | 52, 56, 63 |
| DpnII | GATC | 3 cut(s) | 50, 54, 61 |
| Eam1104I | CTCTTC | 2 cut(s) | 71, 337 |
| EarI | CTCTTC | 2 cut(s) | 71, 337 |
| Eco147I | AGGCCT | 1 cut(s) | 235 |
| Eco57I | CTGAAG | 2 cut(s) | 124, 318 |
| EcoO109I | RGGNCCY | 1 cut(s) | 208 |
| EcoRII | CCWGG | 2 cut(s) | 210, 289 |
| FaiI | YATR | 2 cut(s) | 79, 222 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 308, 340 |
| FaqI | GGGAC | 1 cut(s) | 149 |
| Fnu4HI | GCNGC | 2 cut(s) | 275, 310 |
| Fsp4HI | GCNGC | 2 cut(s) | 275, 310 |
| FspBI | CTAG | 1 cut(s) | 249 |
| GluI | GCNGC | 2 cut(s) | 275, 310 |
| HaeIII | GGCC | 4 cut(s) | 112, 184, 209, 235 |
| HgaI | GACGC | 1 cut(s) | 90 |
| HphI | GGTGA | 2 cut(s) | 226, 279 |
| Hpy188I | TCNGA | 2 cut(s) | 50, 143 |
| Hpy188III | TCNNGA | 2 cut(s) | 105, 336 |
| HpyAV | CCTTC | 3 cut(s) | 102, 255, 259 |
| HpyCH4III | ACNGT | 1 cut(s) | 96 |
| HpyCH4IV | ACGT | 1 cut(s) | 284 |
| HpyCH4V | TGCA | 2 cut(s) | 199, 239 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 232 |
| HpyF3I | CTNAG | 1 cut(s) | 47 |
| HpySE526I | ACGT | 1 cut(s) | 284 |
| Kzo9I | GATC | 3 cut(s) | 50, 54, 61 |
| LpnPI | CCDG | 9 cut(s) | 90, 176, 197, 217, 224, 249, 276, 303, 321 |
| Lsp1109I | GCAGC | 1 cut(s) | 321 |
| MabI | ACCWGGT | 1 cut(s) | 289 |
| MaeI | CTAG | 1 cut(s) | 249 |
| MaeII | ACGT | 1 cut(s) | 284 |
| MaeIII | GTNAC | 2 cut(s) | 285, 293 |
| MalI | GATC | 3 cut(s) | 52, 56, 63 |
| MboI | GATC | 3 cut(s) | 50, 54, 61 |
| MboII | GAAGA | 4 cut(s) | 58, 270, 316, 324 |
| MluCI | AATT | 4 cut(s) | 25, 39, 244, 340 |
| MnlI | CCTC | 5 cut(s) | 56, 199, 200, 272, 340 |
| MspR9I | CCNGG | 2 cut(s) | 212, 291 |
| MvaI | CCWGG | 2 cut(s) | 212, 291 |
| MvnI | CGCG | 2 cut(s) | 101, 277 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 232 |
| NdeII | GATC | 3 cut(s) | 50, 54, 61 |
| NmuCI | GTSAC | 2 cut(s) | 285, 293 |
| PceI | AGGCCT | 1 cut(s) | 235 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 79 |
| PkrI | GCNGC | 2 cut(s) | 276, 311 |
| Ple19I | CGATCG | 1 cut(s) | 57 |
| Psp6I | CCWGG | 2 cut(s) | 210, 289 |
| PspGI | CCWGG | 2 cut(s) | 210, 289 |
| PspPI | GGNCC | 3 cut(s) | 111, 182, 208 |
| PstI | CTGCAG | 1 cut(s) | 241 |
| PvuI | CGATCG | 1 cut(s) | 57 |
| RsaI | GTAC | 1 cut(s) | 283 |
| RsaNI | GTAC | 1 cut(s) | 282 |
| SatI | GCNGC | 2 cut(s) | 275, 310 |
| Sau3AI | GATC | 3 cut(s) | 50, 54, 61 |
| Sau96I | GGNCC | 3 cut(s) | 111, 182, 208 |
| ScrFI | CCNGG | 2 cut(s) | 212, 291 |
| SetI | ASST | 5 cut(s) | 283, 287, 295, 303, 314 |
| SexAI | ACCWGGT | 1 cut(s) | 289 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| Sse9I | AATT | 4 cut(s) | 25, 39, 244, 340 |
| SseBI | AGGCCT | 1 cut(s) | 235 |
| SsiI | CCGC | 1 cut(s) | 275 |
| SspMI | CTAG | 1 cut(s) | 249 |
| StuI | AGGCCT | 1 cut(s) | 235 |
| StyD4I | CCNGG | 2 cut(s) | 210, 289 |
| TaaI | ACNGT | 1 cut(s) | 96 |
| TaiI | ACGT | 1 cut(s) | 287 |
| TaqI | TCGA | 2 cut(s) | 53, 204 |
| TasI | AATT | 4 cut(s) | 25, 39, 244, 340 |
| TauI | GCSGC | 1 cut(s) | 277 |
| TseFI | GTSAC | 2 cut(s) | 285, 293 |
| TseI | GCWGC | 1 cut(s) | 309 |
| Tsp45I | GTSAC | 2 cut(s) | 285, 293 |
| XapI | RAATTY | 2 cut(s) | 25, 244 |
| XspI | CTAG | 1 cut(s) | 249 |