Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1028000.v1.1 |
| pyrus_communis | pycom02g04040 pycom05g12120 pycom05g12150 pycom05g26230 pycom07g01210 pycom09g06540 pycom12g22520 pycom15g10860 pycom17g14480 pycom5153684g00420 |
| rosa_roxburghii | Rroxscaffold_3G00247620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 179 |
| AciI | CCGC | 3 cut(s) | 65, 152, 177 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| AgsI | TTSAA | 1 cut(s) | 62 |
| AjnI | CCWGG | 1 cut(s) | 191 |
| AluBI | AGCT | 1 cut(s) | 102 |
| AluI | AGCT | 1 cut(s) | 102 |
| AoxI | GGCC | 4 cut(s) | 23, 95, 120, 146 |
| AspS9I | GGNCC | 3 cut(s) | 24, 95, 121 |
| AsuC2I | CCSGG | 1 cut(s) | 125 |
| AsuHPI | GGTGA | 2 cut(s) | 139, 181 |
| BciT130I | CCWGG | 1 cut(s) | 193 |
| BcnI | CCSGG | 1 cut(s) | 125 |
| BisI | GCNGC | 1 cut(s) | 177 |
| BlsI | GCNGC | 1 cut(s) | 178 |
| Bme1390I | CCNGG | 2 cut(s) | 125, 193 |
| BmgT120I | GGNCC | 3 cut(s) | 24, 95, 121 |
| BmiI | GGNNCC | 1 cut(s) | 123 |
| BmrFI | CCNGG | 2 cut(s) | 125, 193 |
| BmsI | GCATC | 1 cut(s) | 23 |
| BpuMI | CCSGG | 1 cut(s) | 125 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseBI | CCWGG | 1 cut(s) | 193 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| Bsh1236I | CGCG | 1 cut(s) | 179 |
| Bsh1285I | CGRYCG | 1 cut(s) | 93 |
| BshFI | GGCC | 4 cut(s) | 25, 97, 122, 148 |
| BsiEI | CGRYCG | 1 cut(s) | 93 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BsnI | GGCC | 4 cut(s) | 25, 97, 122, 148 |
| Bsp143I | GATC | 1 cut(s) | 90 |
| BspACI | CCGC | 3 cut(s) | 65, 152, 177 |
| BspANI | GGCC | 4 cut(s) | 25, 97, 122, 148 |
| BspFNI | CGCG | 1 cut(s) | 179 |
| BspLI | GGNNCC | 1 cut(s) | 123 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssMI | GATC | 1 cut(s) | 90 |
| Bst2UI | CCWGG | 1 cut(s) | 193 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstFNI | CGCG | 1 cut(s) | 179 |
| BstKTI | GATC | 1 cut(s) | 93 |
| BstMBI | GATC | 1 cut(s) | 90 |
| BstMCI | CGRYCG | 1 cut(s) | 93 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 145 |
| BstNI | CCWGG | 1 cut(s) | 193 |
| BstSCI | CCNGG | 2 cut(s) | 123, 191 |
| BstUI | CGCG | 1 cut(s) | 179 |
| BsuRI | GGCC | 4 cut(s) | 25, 97, 122, 148 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| Cfr13I | GGNCC | 3 cut(s) | 24, 95, 121 |
| CsiI | ACCWGGT | 1 cut(s) | 191 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviJI | RGCY | 6 cut(s) | 25, 76, 97, 102, 122, 148 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 76, 97, 102, 122, 148 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DpnI | GATC | 1 cut(s) | 92 |
| DpnII | GATC | 1 cut(s) | 90 |
| Eco147I | AGGCCT | 1 cut(s) | 148 |
| EcoO109I | RGGNCCY | 1 cut(s) | 121 |
| EcoRII | CCWGG | 1 cut(s) | 191 |
| FaiI | YATR | 1 cut(s) | 135 |
| FauI | CCCGC | 2 cut(s) | 58, 145 |
| Fnu4HI | GCNGC | 1 cut(s) | 177 |
| Fsp4HI | GCNGC | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 177 |
| HaeIII | GGCC | 4 cut(s) | 25, 97, 122, 148 |
| HapII | CCGG | 1 cut(s) | 125 |
| HpaII | CCGG | 1 cut(s) | 125 |
| HphI | GGTGA | 2 cut(s) | 139, 181 |
| Hpy188I | TCNGA | 1 cut(s) | 56 |
| Hpy188III | TCNNGA | 1 cut(s) | 18 |
| HpyAV | CCTTC | 3 cut(s) | 15, 157, 161 |
| HpyCH4IV | ACGT | 1 cut(s) | 186 |
| HpyCH4V | TGCA | 1 cut(s) | 112 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 145 |
| HpySE526I | ACGT | 1 cut(s) | 186 |
| Kzo9I | GATC | 1 cut(s) | 90 |
| LpnPI | CCDG | 6 cut(s) | 3, 130, 138, 162, 178, 205 |
| LweI | GCATC | 1 cut(s) | 23 |
| MabI | ACCWGGT | 1 cut(s) | 191 |
| MaeII | ACGT | 1 cut(s) | 186 |
| MaeIII | GTNAC | 3 cut(s) | 85, 187, 195 |
| MalI | GATC | 1 cut(s) | 92 |
| MboI | GATC | 1 cut(s) | 90 |
| MboII | GAAGA | 1 cut(s) | 172 |
| MnlI | CCTC | 3 cut(s) | 66, 112, 174 |
| MspI | CCGG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 2 cut(s) | 125, 193 |
| MvaI | CCWGG | 1 cut(s) | 193 |
| MvnI | CGCG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 145 |
| NciI | CCSGG | 1 cut(s) | 125 |
| NdeII | GATC | 1 cut(s) | 90 |
| NlaIV | GGNNCC | 1 cut(s) | 123 |
| NmeAIII | GCCGAG | 1 cut(s) | 123 |
| NmuCI | GTSAC | 2 cut(s) | 187, 195 |
| PceI | AGGCCT | 1 cut(s) | 148 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 95 |
| PkrI | GCNGC | 1 cut(s) | 178 |
| Ple19I | CGATCG | 1 cut(s) | 93 |
| Psp6I | CCWGG | 1 cut(s) | 191 |
| PspGI | CCWGG | 1 cut(s) | 191 |
| PspN4I | GGNNCC | 1 cut(s) | 123 |
| PspPI | GGNCC | 3 cut(s) | 24, 95, 121 |
| PvuI | CGATCG | 1 cut(s) | 93 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| SatI | GCNGC | 1 cut(s) | 177 |
| Sau3AI | GATC | 1 cut(s) | 90 |
| Sau96I | GGNCC | 3 cut(s) | 24, 95, 121 |
| ScrFI | CCNGG | 2 cut(s) | 125, 193 |
| SetI | ASST | 4 cut(s) | 104, 185, 189, 197 |
| SexAI | ACCWGGT | 1 cut(s) | 191 |
| SfaNI | GCATC | 1 cut(s) | 23 |
| SseBI | AGGCCT | 1 cut(s) | 148 |
| SsiI | CCGC | 3 cut(s) | 65, 152, 177 |
| StuI | AGGCCT | 1 cut(s) | 148 |
| StyD4I | CCNGG | 2 cut(s) | 123, 191 |
| TaiI | ACGT | 1 cut(s) | 189 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TauI | GCSGC | 1 cut(s) | 179 |
| TseFI | GTSAC | 2 cut(s) | 187, 195 |
| Tsp45I | GTSAC | 2 cut(s) | 187, 195 |