Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD17G1028000.v1.1 |
| pyrus_communis | pycom02g04040 pycom05g12120 pycom05g12150 pycom05g26230 pycom07g01210 pycom09g06540 pycom12g22520 pycom15g10860 pycom17g14480 pycom5153684g00420 |
| rosa_roxburghii | Rroxscaffold_3G00247620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 37, 41, 212, 299 |
| AcuI | CTGAAG | 1 cut(s) | 367 |
| AfaI | GTAC | 1 cut(s) | 332 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 163, 179 |
| AgsI | TTSAA | 3 cut(s) | 55, 209, 365 |
| AjnI | CCWGG | 1 cut(s) | 338 |
| AluBI | AGCT | 2 cut(s) | 249, 361 |
| AluI | AGCT | 2 cut(s) | 249, 361 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 390 |
| AoxI | GGCC | 3 cut(s) | 170, 242, 267 |
| ApeKI | GCWGC | 1 cut(s) | 358 |
| AspS9I | GGNCC | 3 cut(s) | 171, 242, 268 |
| AsuC2I | CCSGG | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 2 cut(s) | 286, 328 |
| BanII | GRGCYC | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 365 |
| BbvI | GCAGC | 1 cut(s) | 370 |
| BccI | CCATC | 2 cut(s) | 16, 165 |
| BciT130I | CCWGG | 1 cut(s) | 340 |
| BcnI | CCSGG | 1 cut(s) | 272 |
| BfaI | CTAG | 1 cut(s) | 327 |
| BglII | AGATCT | 1 cut(s) | 48 |
| BisI | GCNGC | 1 cut(s) | 359 |
| BlsI | GCNGC | 1 cut(s) | 360 |
| Bme1390I | CCNGG | 2 cut(s) | 272, 340 |
| BmgT120I | GGNCC | 3 cut(s) | 171, 242, 268 |
| BmiI | GGNNCC | 1 cut(s) | 270 |
| BmrFI | CCNGG | 2 cut(s) | 272, 340 |
| BpiI | GAAGAC | 1 cut(s) | 365 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 11, 43 |
| BpuMI | CCSGG | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 1 cut(s) | 270 |
| BsaWI | WCCGGW | 1 cut(s) | 163 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 163, 179 |
| BseBI | CCWGG | 1 cut(s) | 340 |
| BseDI | CCNNGG | 1 cut(s) | 270 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 163, 179 |
| BseXI | GCAGC | 1 cut(s) | 370 |
| Bsh1285I | CGRYCG | 1 cut(s) | 240 |
| BshFI | GGCC | 3 cut(s) | 172, 244, 269 |
| BsiEI | CGRYCG | 1 cut(s) | 240 |
| BsiSI | CCGG | 2 cut(s) | 164, 272 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 163, 179 |
| BsnI | GGCC | 3 cut(s) | 172, 244, 269 |
| Bsp1286I | GDGCHC | 1 cut(s) | 29 |
| Bsp143I | GATC | 2 cut(s) | 48, 237 |
| BspACI | CCGC | 4 cut(s) | 37, 41, 212, 299 |
| BspANI | GGCC | 3 cut(s) | 172, 244, 269 |
| BspLI | GGNNCC | 1 cut(s) | 270 |
| BspQI | GCTCTTC | 1 cut(s) | 5 |
| BssECI | CCNNGG | 1 cut(s) | 270 |
| BssMI | GATC | 2 cut(s) | 48, 237 |
| Bst2UI | CCWGG | 1 cut(s) | 340 |
| Bst4CI | ACNGT | 2 cut(s) | 65, 85 |
| Bst6I | CTCTTC | 3 cut(s) | 5, 39, 386 |
| BstC8I | GCNNGC | 1 cut(s) | 39 |
| BstKTI | GATC | 2 cut(s) | 51, 240 |
| BstMBI | GATC | 2 cut(s) | 48, 237 |
| BstMCI | CGRYCG | 1 cut(s) | 240 |
| BstNI | CCWGG | 1 cut(s) | 340 |
| BstSCI | CCNGG | 2 cut(s) | 270, 338 |
| BstV1I | GCAGC | 1 cut(s) | 370 |
| BstV2I | GAAGAC | 1 cut(s) | 365 |
| BstX2I | RGATCY | 1 cut(s) | 48 |
| BstYI | RGATCY | 1 cut(s) | 48 |
| BsuRI | GGCC | 3 cut(s) | 172, 244, 269 |
| BtsIMutI | CAGTG | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 1 cut(s) | 39 |
| CaiI | CAGNNNCTG | 1 cut(s) | 390 |
| Cfr13I | GGNCC | 3 cut(s) | 171, 242, 268 |
| CsiI | ACCWGGT | 1 cut(s) | 338 |
| Csp6I | GTAC | 1 cut(s) | 331 |
| CviJI | RGCY | 8 cut(s) | 27, 150, 172, 223, 244, 249, 269, 361 |
| CviKI_1 | RGCY | 8 cut(s) | 27, 150, 172, 223, 244, 249, 269, 361 |
| CviQI | GTAC | 1 cut(s) | 331 |
| DpnI | GATC | 2 cut(s) | 50, 239 |
| DpnII | GATC | 2 cut(s) | 48, 237 |
| Eam1104I | CTCTTC | 3 cut(s) | 5, 39, 386 |
| EarI | CTCTTC | 3 cut(s) | 5, 39, 386 |
| EciI | GGCGGA | 1 cut(s) | 56 |
| Eco24I | GRGCYC | 1 cut(s) | 29 |
| Eco57I | CTGAAG | 1 cut(s) | 367 |
| EcoO109I | RGGNCCY | 1 cut(s) | 268 |
| EcoRII | CCWGG | 1 cut(s) | 338 |
| EcoT38I | GRGCYC | 1 cut(s) | 29 |
| FaiI | YATR | 2 cut(s) | 282, 415 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 357, 389 |
| FauI | CCCGC | 3 cut(s) | 30, 205, 292 |
| Fnu4HI | GCNGC | 1 cut(s) | 359 |
| FriOI | GRGCYC | 1 cut(s) | 29 |
| Fsp4HI | GCNGC | 1 cut(s) | 359 |
| FspBI | CTAG | 1 cut(s) | 327 |
| GluI | GCNGC | 1 cut(s) | 359 |
| HaeIII | GGCC | 3 cut(s) | 172, 244, 269 |
| HapII | CCGG | 2 cut(s) | 164, 272 |
| HincII | GTYRAC | 1 cut(s) | 142 |
| HindII | GTYRAC | 1 cut(s) | 142 |
| HinfI | GANTC | 2 cut(s) | 31, 425 |
| HpaII | CCGG | 2 cut(s) | 164, 272 |
| HphI | GGTGA | 2 cut(s) | 286, 328 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 142 |
| Hpy188I | TCNGA | 2 cut(s) | 72, 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 398 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 142 |
| HpyAV | CCTTC | 2 cut(s) | 304, 308 |
| HpyCH4III | ACNGT | 2 cut(s) | 65, 85 |
| HpyCH4IV | ACGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 1 cut(s) | 259 |
| HpySE526I | ACGT | 1 cut(s) | 333 |
| Kzo9I | GATC | 2 cut(s) | 48, 237 |
| LguI | GCTCTTC | 1 cut(s) | 5 |
| LpnPI | CCDG | 6 cut(s) | 177, 277, 285, 325, 352, 411 |
| Lsp1109I | GCAGC | 1 cut(s) | 370 |
| MabI | ACCWGGT | 1 cut(s) | 338 |
| MaeI | CTAG | 1 cut(s) | 327 |
| MaeII | ACGT | 1 cut(s) | 333 |
| MaeIII | GTNAC | 4 cut(s) | 232, 322, 334, 342 |
| MalI | GATC | 2 cut(s) | 50, 239 |
| MboI | GATC | 2 cut(s) | 48, 237 |
| MboII | GAAGA | 6 cut(s) | 22, 43, 56, 319, 365, 373 |
| MflI | RGATCY | 1 cut(s) | 48 |
| MhlI | GDGCHC | 1 cut(s) | 29 |
| MmeI | TCCRAC | 1 cut(s) | 50 |
| MnlI | CCTC | 3 cut(s) | 213, 259, 389 |
| MseI | TTAA | 1 cut(s) | 95 |
| MspI | CCGG | 2 cut(s) | 164, 272 |
| MspR9I | CCNGG | 2 cut(s) | 272, 340 |
| MvaI | CCWGG | 1 cut(s) | 340 |
| NciI | CCSGG | 1 cut(s) | 272 |
| NdeII | GATC | 2 cut(s) | 48, 237 |
| NlaIV | GGNNCC | 1 cut(s) | 270 |
| NmeAIII | GCCGAG | 1 cut(s) | 270 |
| NmuCI | GTSAC | 3 cut(s) | 322, 334, 342 |
| PciSI | GCTCTTC | 1 cut(s) | 5 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 242 |
| PfeI | GAWTC | 1 cut(s) | 31 |
| PkrI | GCNGC | 1 cut(s) | 360 |
| Ple19I | CGATCG | 1 cut(s) | 240 |
| Psp6I | CCWGG | 1 cut(s) | 338 |
| PspGI | CCWGG | 1 cut(s) | 338 |
| PspN4I | GGNNCC | 1 cut(s) | 270 |
| PspPI | GGNCC | 3 cut(s) | 171, 242, 268 |
| PstNI | CAGNNNCTG | 1 cut(s) | 390 |
| PsuI | RGATCY | 1 cut(s) | 48 |
| PvuI | CGATCG | 1 cut(s) | 240 |
| RsaI | GTAC | 1 cut(s) | 332 |
| RsaNI | GTAC | 1 cut(s) | 331 |
| SapI | GCTCTTC | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 95 |
| SatI | GCNGC | 1 cut(s) | 359 |
| Sau3AI | GATC | 2 cut(s) | 48, 237 |
| Sau96I | GGNCC | 3 cut(s) | 171, 242, 268 |
| ScrFI | CCNGG | 2 cut(s) | 272, 340 |
| SduI | GDGCHC | 1 cut(s) | 29 |
| SetI | ASST | 8 cut(s) | 116, 126, 251, 296, 332, 336, 344, 363 |
| SexAI | ACCWGGT | 1 cut(s) | 338 |
| SsiI | CCGC | 4 cut(s) | 37, 41, 212, 299 |
| SspMI | CTAG | 1 cut(s) | 327 |
| StyD4I | CCNGG | 2 cut(s) | 270, 338 |
| TaaI | ACNGT | 2 cut(s) | 65, 85 |
| TaiI | ACGT | 1 cut(s) | 336 |
| TaqI | TCGA | 2 cut(s) | 29, 264 |
| TfiI | GAWTC | 1 cut(s) | 31 |
| Tru1I | TTAA | 1 cut(s) | 95 |
| Tru9I | TTAA | 1 cut(s) | 95 |
| TscAI | CASTG | 1 cut(s) | 70 |
| TseFI | GTSAC | 3 cut(s) | 322, 334, 342 |
| TseI | GCWGC | 1 cut(s) | 358 |
| Tsp45I | GTSAC | 3 cut(s) | 322, 334, 342 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 70 |
| XspI | CTAG | 1 cut(s) | 327 |