pycom02g05370

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
3592699 .. 3595591
2893 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g05370.2

Sequence Viewer

Length: 1509 bp
ATGGGAAGTGGGTTCTTCCGGCTTGTCATTGCCACTTCAGTGCTGCTTACACTTTTGGATGTTTGCCGAGGAAGTACCATTGGAATTTGCTACGGTAGAAATGCTGATGATCTTCCGACGCCTGACAAAGCATCGCAGCTTGTGCAGCTCCATAACATTAAATATGTTAGGATTTACGACTCCAACATACAAGTTCTCAAGGCCTTTGCAAACACTGGCGTTGAACTTATGATTGGGGTTCCAAATTCAGATTTGTTGGCGTTTTCACAGTTCCAATCCAATGTAGACACCTGGCTCAAGAACAGTATCCTGCCTTACTACCCAGGGACGAAGATCGCATACATAACGGTTGGAGCTGAAGTTACTGAGAGTTCCAGTAATTTCTCTGTCCAAGTAATGCCAGCCATGAGAAATGTCTTCACAGCCTTAAAAAAAGTTGGTCTGTCTAAGAAGATCAAATTATCAAGCACACATTCCCTCGGTGTTCTGTCCCGATCATTTCCTCCCTCAGCAGGGGCTTTTAATAGCAGCCATGCGTCTTTCCTGAAACCGCTGTTGGAATTCCTCGCTGAAAACCAGTCACCCTTCATGGTTGATATTTATCCATACTATGCTTACAGAGATTCTCCAAGCAATGTCACTTTGGATTACGCTCTATTTGATGCATCGTCAGAAGTTATTGATCCAAACACTGGTTTGATATACACTAACATGCTCGATGCTCAGATTGACGCTATATATTACGCGCTGATGGCCCTGAATTTCAAAACAATCAAAGTTATGGTCACTGAGACGGGCTGGCCTTCAAAAGGATCGCCTAAAGAGACAGCTGCAACTCCTGATAATGCACAAACTTACAATACCAATTTGATTCGCCATGTCATTAACAACACTGGCACTCCTGCAAAGCCGGGAGAGAGGCTGGATGTGTACATCTTCTCTTTGTTCAACGAAAATAGGAAGCCAGGGTTGGAATCTGAGAGGAACTGGGGGCTATTTTACCCAGACCAGACTAGCGTCTACAACCTGGATTTCACTGGAAAAAGTTCGGTGGATATGATTACAGAGACTAATGTTACCAGTTCAAATGGAACGACACCGACATGGTGCATTGCTTCGAGTAAGGCTTCTGAACTCGACTTGCAGAATGCCTTGGATTGGGCTTGTGGTCCTGGGAATGTGGACTGTAGAGCTATTCAGCCTAGCCAGCCTTGTTTCGAGCCAGATAATACCGTTTCTCATGCGTCATACGCATTCAACAGTTATTACCAGCAAAATGGGGCTACTGATATTGCTTGCAGTTTCGGAGGAACAGGGTTCAAGGTCGATAAGAACCCAAGCTATGACAACTGCATCTATATGACTACTGGGAGCAACAAAACCGTGCCAAGTAATACGACTGCAATATCTTCTACTTCTTCCTCTTCCACAATGAGCGGAGTTCCGGTGTGGATTTGTAGTTGCTTTCTGGTGACTTTCATGTCGTTTCTTTCCCCCGATACCAGATAA

Protein Analysis

503

Amino Acids

54.88

Weight (kDa)

5.35

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1480
AccB7I CCANNNNNTGG 1 cut(s) 692
AccBSI CCGCTC 1 cut(s) 1437
AccI GTMKAC 2 cut(s) 285, 1020
AccII CGCG 1 cut(s) 746
AciI CCGC 2 cut(s) 551, 1437
AclWI GGATC 2 cut(s) 677, 820
AcsI RAATTY 4 cut(s) 84, 244, 560, 760
AcuI CTGAAG 2 cut(s) 21, 378
AcyI GRCGYC 1 cut(s) 119
AfaI GTAC 2 cut(s) 76, 932
AfiI CCNNNNNNNGG 5 cut(s) 512, 513, 692, 809, 1158
AgsI TTSAA 7 cut(s) 224, 766, 807, 949, 1086, 1258, 1321
AjnI CCWGG 5 cut(s) 290, 322, 964, 1026, 1171
AjuI GAANNNNNNNTTGG 6 cut(s) 216, 248, 539, 571, 953, 985
AleI CACNNNNGTG 1 cut(s) 38
AluBI AGCT 6 cut(s) 139, 148, 356, 830, 1193, 1341
AluI AGCT 6 cut(s) 139, 148, 356, 830, 1193, 1341
Alw26I GTCTC 3 cut(s) 785, 818, 1061
AlwI GGATC 2 cut(s) 677, 820
AoxI GGCC 3 cut(s) 201, 753, 800
ApeKI GCWGC 5 cut(s) 43, 136, 145, 528, 830
ApoI RAATTY 4 cut(s) 84, 244, 560, 760
ArsI GACNNNNNNTTYG 2 cut(s) 768, 800
Asp700I GAANNNNTTC 1 cut(s) 1045
AspLEI GCGC 1 cut(s) 748
AspS9I GGNCC 2 cut(s) 754, 1169
AsuC2I CCSGG 1 cut(s) 912
AsuHPI GGTGA 2 cut(s) 573, 1483
AvaII GGWCC 1 cut(s) 1169
BarI GAAGNNNNNNTAC 2 cut(s) 323, 355
BbsI GAAGAC 1 cut(s) 409
BbvCI CCTCAGC 1 cut(s) 508
BbvI GCAGC 5 cut(s) 30, 148, 157, 540, 817
BccI CCATC 1 cut(s) 745
BciT130I CCWGG 5 cut(s) 292, 324, 966, 1028, 1173
BciVI GTATCC 1 cut(s) 317
BcnI CCSGG 1 cut(s) 912
BcoDI GTCTC 3 cut(s) 785, 818, 1061
BfaI CTAG 2 cut(s) 1014, 1203
BfmI CTRYAG 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 317
BisI GCNGC 5 cut(s) 44, 137, 146, 529, 831
BlsI GCNGC 5 cut(s) 45, 138, 147, 530, 832
Bme1390I CCNGG 6 cut(s) 292, 324, 912, 966, 1028, 1173
Bme18I GGWCC 1 cut(s) 1169
BmgT120I GGNCC 2 cut(s) 754, 1169
BmiI GGNNCC 1 cut(s) 240
BmrFI CCNGG 6 cut(s) 292, 324, 912, 966, 1028, 1173
BmrI ACTGGG 2 cut(s) 997, 1377
BmsI GCATC 5 cut(s) 140, 652, 674, 709, 1362
BmuI ACTGGG 2 cut(s) 997, 1377
BoxI GACNNNNGTC 1 cut(s) 1016
BpiI GAAGAC 1 cut(s) 409
Bpu10I CCTNAGC 1 cut(s) 508
BpuEI CTTGAG 2 cut(s) 182, 281
BpuMI CCSGG 1 cut(s) 912
BsaBI GATNNNNATC 1 cut(s) 600
BsaHI GRCGYC 1 cut(s) 119
BsaJI CCNNGG 7 cut(s) 67, 322, 323, 478, 965, 1152, 1172
BsaWI WCCGGW 1 cut(s) 1444
BsaXI ACNNNNNCTCC 6 cut(s) 345, 375, 883, 913, 1431, 1461
Bsc4I CCNNNNNNNGG 5 cut(s) 512, 513, 692, 809, 1158
Bse1I ACTGG 9 cut(s) 220, 375, 577, 697, 898, 992, 1042, 1080, 1372
Bse3DI GCAATG 3 cut(s) 27, 640, 1110
Bse8I GATNNNNATC 1 cut(s) 600
BseBI CCWGG 5 cut(s) 292, 324, 966, 1028, 1173
BseDI CCNNGG 7 cut(s) 67, 322, 323, 478, 965, 1152, 1172
BseGI GGATG 2 cut(s) 64, 931
BseJI GATNNNNATC 1 cut(s) 600
BseLI CCNNNNNNNGG 5 cut(s) 512, 513, 692, 809, 1158
BseMI GCAATG 3 cut(s) 27, 640, 1110
BseMII CTCAG 5 cut(s) 357, 522, 737, 780, 969
BseNI ACTGG 9 cut(s) 220, 375, 577, 697, 898, 992, 1042, 1080, 1372
BseXI GCAGC 5 cut(s) 30, 148, 157, 540, 817
BsgI GTGCAG 1 cut(s) 164
Bsh1236I CGCG 1 cut(s) 746
BshFI GGCC 3 cut(s) 203, 755, 802
BsiSI CCGG 3 cut(s) 19, 911, 1445
BslFI GGGAC 2 cut(s) 340, 475
BslI CCNNNNNNNGG 5 cut(s) 512, 513, 692, 809, 1158
BsmAI GTCTC 3 cut(s) 785, 818, 1061
BsmBI CGTCTC 1 cut(s) 785
BsmFI GGGAC 2 cut(s) 340, 475
BsmI GAATGC 2 cut(s) 1153, 1253
BsnI GGCC 3 cut(s) 203, 755, 802
Bsp1407I TGTACA 1 cut(s) 930
Bsp143I GATC 6 cut(s) 109, 333, 453, 494, 682, 812
BspACI CCGC 2 cut(s) 551, 1437
BspANI GGCC 3 cut(s) 203, 755, 802
BspCNI CTCAG 5 cut(s) 358, 521, 736, 781, 970
BspFNI CGCG 1 cut(s) 746
BspLI GGNNCC 1 cut(s) 240
BspPI GGATC 2 cut(s) 677, 820
BsrBI CCGCTC 1 cut(s) 1437
BsrDI GCAATG 3 cut(s) 27, 640, 1110
BsrGI TGTACA 1 cut(s) 930
BsrI ACTGG 9 cut(s) 220, 375, 577, 697, 898, 992, 1042, 1080, 1372
BssECI CCNNGG 7 cut(s) 67, 322, 323, 478, 965, 1152, 1172
BssMI GATC 6 cut(s) 109, 333, 453, 494, 682, 812
BssNI GRCGYC 1 cut(s) 119
BssT1I CCWWGG 1 cut(s) 1152
Bst2UI CCWGG 5 cut(s) 292, 324, 966, 1028, 1173
Bst4CI ACNGT 8 cut(s) 95, 270, 305, 349, 1187, 1234, 1262, 1384
Bst6I CTCTTC 1 cut(s) 1429
BstACI GRCGYC 1 cut(s) 119
BstAPI GCANNNNNTGC 1 cut(s) 142
BstAUI TGTACA 1 cut(s) 930
BstC8I GCNNGC 4 cut(s) 402, 800, 1208, 1297
BstDEI CTNAG 6 cut(s) 366, 447, 508, 723, 789, 978
BstENI CCTNNNNNAGG 1 cut(s) 807
BstF5I GGATG 2 cut(s) 64, 931
BstFNI CGCG 1 cut(s) 746
BstHHI GCGC 1 cut(s) 748
BstKTI GATC 6 cut(s) 112, 336, 456, 497, 685, 815
BstMAI GTCTC 3 cut(s) 785, 818, 1061
BstMBI GATC 6 cut(s) 109, 333, 453, 494, 682, 812
BstMWI GCNNNNNNNGC 5 cut(s) 142, 145, 752, 1207, 1250
BstNI CCWGG 5 cut(s) 292, 324, 966, 1028, 1173
BstNSI RCATGY 1 cut(s) 715
BstPAI GACNNNNGTC 1 cut(s) 1016
BstSCI CCNGG 6 cut(s) 290, 322, 910, 964, 1026, 1171
BstSFI CTRYAG 1 cut(s) 1186
BstUI CGCG 1 cut(s) 746
BstV1I GCAGC 5 cut(s) 30, 148, 157, 540, 817
BstV2I GAAGAC 1 cut(s) 409
BstXI CCANNNNNNTGG 1 cut(s) 1277
BsuI GTATCC 1 cut(s) 317
BsuRI GGCC 3 cut(s) 203, 755, 802
BtgZI GCGATG 1 cut(s) 117
BtsCI GGATG 2 cut(s) 64, 931
BtsIMutI CAGTG 6 cut(s) 45, 213, 690, 786, 891, 1035
Cac8I GCNNGC 4 cut(s) 402, 800, 1208, 1297
CfoI GCGC 1 cut(s) 748
Cfr13I GGNCC 2 cut(s) 754, 1169
CseI GACGC 5 cut(s) 127, 525, 740, 1006, 1233
Csp6I GTAC 2 cut(s) 75, 931
CviAII CATG 8 cut(s) 406, 533, 589, 712, 878, 1104, 1241, 1480
CviQI GTAC 2 cut(s) 75, 931
DdeI CTNAG 6 cut(s) 366, 447, 508, 723, 789, 978
DpnI GATC 6 cut(s) 111, 335, 455, 496, 684, 814
DpnII GATC 6 cut(s) 109, 333, 453, 494, 682, 812
DrdI GACNNNNNNGTC 1 cut(s) 1480
DseDI GACNNNNNNGTC 1 cut(s) 1480
Eam1104I CTCTTC 1 cut(s) 1429
EarI CTCTTC 1 cut(s) 1429
Eco130I CCWWGG 1 cut(s) 1152
Eco147I AGGCCT 1 cut(s) 203
Eco47I GGWCC 1 cut(s) 1169
Eco57I CTGAAG 2 cut(s) 21, 378
EcoNI CCTNNNNNAGG 1 cut(s) 807
EcoRI GAATTC 1 cut(s) 560
EcoRII CCWGG 5 cut(s) 290, 322, 964, 1026, 1171
EcoT14I CCWWGG 1 cut(s) 1152
EcoT22I ATGCAT 1 cut(s) 667
ErhI CCWWGG 1 cut(s) 1152
Esp3I CGTCTC 1 cut(s) 785
FaeI CATG 8 cut(s) 409, 536, 592, 715, 881, 1107, 1244, 1483
FaqI GGGAC 2 cut(s) 340, 475
FatI CATG 8 cut(s) 405, 532, 588, 711, 877, 1103, 1240, 1479
FblI GTMKAC 2 cut(s) 285, 1020
Fnu4HI GCNGC 5 cut(s) 44, 137, 146, 529, 831
FokI GGATG 2 cut(s) 71, 938
Fsp4HI GCNGC 5 cut(s) 44, 137, 146, 529, 831
FspBI CTAG 2 cut(s) 1014, 1203
GlaI GCGC 1 cut(s) 747
GluI GCNGC 5 cut(s) 44, 137, 146, 529, 831
HaeIII GGCC 3 cut(s) 203, 755, 802
HapII CCGG 3 cut(s) 19, 911, 1445
HgaI GACGC 5 cut(s) 127, 525, 740, 1006, 1233
HhaI GCGC 1 cut(s) 748
Hin1I GRCGYC 1 cut(s) 119
Hin1II CATG 8 cut(s) 409, 536, 592, 715, 881, 1107, 1244, 1483
Hin6I GCGC 1 cut(s) 746
HinP1I GCGC 1 cut(s) 746
HinfI GANTC 4 cut(s) 179, 623, 871, 974
HpaII CCGG 3 cut(s) 19, 911, 1445
HphI GGTGA 2 cut(s) 573, 1483
Hpy166II GTNNAC 4 cut(s) 286, 931, 1021, 1183
Hpy188I TCNGA 7 cut(s) 117, 250, 673, 726, 979, 1132, 1307
Hpy188III TCNNGA 4 cut(s) 298, 492, 544, 839
Hpy8I GTNNAC 4 cut(s) 286, 931, 1021, 1183
Hpy99I CGWCG 1 cut(s) 121
HpyAV CCTTC 2 cut(s) 595, 813
HpyCH4III ACNGT 8 cut(s) 95, 270, 305, 349, 1187, 1234, 1262, 1384
HpyF10VI GCNNNNNNNGC 5 cut(s) 142, 145, 752, 1207, 1250
HpyF3I CTNAG 6 cut(s) 366, 447, 508, 723, 789, 978
Hsp92I GRCGYC 1 cut(s) 119
Hsp92II CATG 8 cut(s) 409, 536, 592, 715, 881, 1107, 1244, 1483
HspAI GCGC 1 cut(s) 746
Kzo9I GATC 6 cut(s) 109, 333, 453, 494, 682, 812
LmnI GCTCC 3 cut(s) 153, 353, 1371
Lsp1109I GCAGC 5 cut(s) 30, 148, 157, 540, 817
LweI GCATC 5 cut(s) 140, 652, 674, 709, 1362
MaeI CTAG 2 cut(s) 1014, 1203
MaeIII GTNAC 6 cut(s) 361, 579, 637, 784, 1075, 1471
MalI GATC 6 cut(s) 111, 335, 455, 496, 684, 814
MbiI CCGCTC 1 cut(s) 1437
MboI GATC 6 cut(s) 109, 333, 453, 494, 682, 812
MboII GAAGA 9 cut(s) 7, 104, 343, 409, 463, 928, 1401, 1410, 1416
MluCI AATT 7 cut(s) 84, 244, 379, 458, 560, 760, 865
MlyI GAGTC 1 cut(s) 173
MmeI TCCRAC 5 cut(s) 140, 207, 331, 537, 951
MnlI CCTC 9 cut(s) 62, 488, 513, 517, 575, 912, 975, 1301, 1432
Mph1103I ATGCAT 1 cut(s) 667
MroXI GAANNNNTTC 1 cut(s) 1045
MseI TTAA 4 cut(s) 159, 428, 522, 885
MslI CAYNNNNRTG 4 cut(s) 38, 710, 1102, 1358
MspA1I CMGCKG 2 cut(s) 553, 830
MspI CCGG 3 cut(s) 19, 911, 1445
MspR9I CCNGG 6 cut(s) 292, 324, 912, 966, 1028, 1173
Mva1269I GAATGC 2 cut(s) 1153, 1253
MvaI CCWGG 5 cut(s) 292, 324, 966, 1028, 1173
MvnI CGCG 1 cut(s) 746
MwoI GCNNNNNNNGC 5 cut(s) 142, 145, 752, 1207, 1250
NciI CCSGG 1 cut(s) 912
NdeII GATC 6 cut(s) 109, 333, 453, 494, 682, 812
NlaIII CATG 8 cut(s) 409, 536, 592, 715, 881, 1107, 1244, 1483
NlaIV GGNNCC 1 cut(s) 240
NmeAIII GCCGAG 1 cut(s) 92
NmuCI GTSAC 4 cut(s) 579, 637, 784, 1471
NsiI ATGCAT 1 cut(s) 667
NspI RCATGY 1 cut(s) 715
OliI CACNNNNGTG 1 cut(s) 38
PasI CCCWGGG 1 cut(s) 323
PceI AGGCCT 1 cut(s) 203
PctI GAATGC 2 cut(s) 1153, 1253
PdmI GAANNNNTTC 1 cut(s) 1045
PfeI GAWTC 3 cut(s) 623, 871, 974
PflMI CCANNNNNTGG 1 cut(s) 692
PkrI GCNGC 5 cut(s) 45, 138, 147, 530, 832
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
PshAI GACNNNNGTC 1 cut(s) 1016
Psp6I CCWGG 5 cut(s) 290, 322, 964, 1026, 1171
PspGI CCWGG 5 cut(s) 290, 322, 964, 1026, 1171
PspN4I GGNNCC 1 cut(s) 240
PspPI GGNCC 2 cut(s) 754, 1169
PvuII CAGCTG 1 cut(s) 830
RsaI GTAC 2 cut(s) 76, 932
RsaNI GTAC 2 cut(s) 75, 931
RseI CAYNNNNRTG 4 cut(s) 38, 710, 1102, 1358
SaqAI TTAA 4 cut(s) 159, 428, 522, 885
SatI GCNGC 5 cut(s) 44, 137, 146, 529, 831
Sau3AI GATC 6 cut(s) 109, 333, 453, 494, 682, 812
Sau96I GGNCC 2 cut(s) 754, 1169
SchI GAGTC 1 cut(s) 173
ScrFI CCNGG 6 cut(s) 292, 324, 912, 966, 1028, 1173
SetI ASST 9 cut(s) 141, 150, 293, 358, 832, 1029, 1195, 1326, 1343
SfaNI GCATC 5 cut(s) 140, 652, 674, 709, 1362
SfcI CTRYAG 1 cut(s) 1186
SinI GGWCC 1 cut(s) 1169
SmiMI CAYNNNNRTG 4 cut(s) 38, 710, 1102, 1358
SmlI CTYRAG 2 cut(s) 197, 296
SmoI CTYRAG 2 cut(s) 197, 296
Sse9I AATT 7 cut(s) 84, 244, 379, 458, 560, 760, 865
SseBI AGGCCT 1 cut(s) 203
SsiI CCGC 2 cut(s) 551, 1437
SspMI CTAG 2 cut(s) 1014, 1203
StuI AGGCCT 1 cut(s) 203
StyD4I CCNGG 6 cut(s) 290, 322, 910, 964, 1026, 1171
StyI CCWWGG 1 cut(s) 1152
TaaI ACNGT 8 cut(s) 95, 270, 305, 349, 1187, 1234, 1262, 1384
TaqI TCGA 5 cut(s) 717, 1118, 1137, 1218, 1326
TasI AATT 7 cut(s) 84, 244, 379, 458, 560, 760, 865
TatI WGTACW 1 cut(s) 930
TfiI GAWTC 3 cut(s) 623, 871, 974
Tru1I TTAA 4 cut(s) 159, 428, 522, 885
Tru9I TTAA 4 cut(s) 159, 428, 522, 885
TscAI CASTG 6 cut(s) 45, 220, 697, 793, 898, 1042
TseFI GTSAC 4 cut(s) 579, 637, 784, 1471
TseI GCWGC 5 cut(s) 43, 136, 145, 528, 830
Tsp45I GTSAC 4 cut(s) 579, 637, 784, 1471
TspDTI ATGAA 2 cut(s) 577, 1468
TspRI CASTG 6 cut(s) 45, 220, 697, 793, 898, 1042
Van91I CCANNNNNTGG 1 cut(s) 692
VpaK11BI GGWCC 1 cut(s) 1169
XagI CCTNNNNNAGG 1 cut(s) 807
XapI RAATTY 4 cut(s) 84, 244, 560, 760
XceI RCATGY 1 cut(s) 715
XmiI GTMKAC 2 cut(s) 285, 1020
XmnI GAANNNNTTC 1 cut(s) 1045
XspI CTAG 2 cut(s) 1014, 1203
Zsp2I ATGCAT 1 cut(s) 667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.