pycom02g08420
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0009582
Physical Location & Seq
Forward (+)
5871281 .. 5873653
2373 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g08420.6

Sequence Viewer

Length: 1002 bp
ATGTATCTGTGTTCATCCTCTATGCCTCCGAGCAAGGACATTGGGGGGTATTTGTCCGAGTATGTCCACAATGTAGCACATGGTGTGAATATTGACTCTGAGGTTCGAGTTCTAGCAATTAATACATTAAATGCCTTGAAGCGTTCTGTAAAGGCTGGTCCTAGGCATACAATACCAGGCCGCGAGGAGATTGAAGCGCTTTTAACTGGTCGAAAGCTAACTACAATTGTGTTTTTCTTGGATGAAACCTTTGAAGAAATCACATATGAAATGGCAACAACAGTGGCTGATGCTGTTGAGGAACTTGCAGGGGTAATTAAACTCTCAGCTCTTTCTAGCTTTAGTCTGTTTGAATGCCGCAAAGTTGTAACTGGCTCCAAATCACCTGATCCTGGAAATGAGGAGTATATTGGGTTAGATGACAACAAGTACATAGGGGATCTATTAGCAGAACTCAAGGCCGCAAAGGATCGAAGTAAAGGAGAAATATTGCATTGCAAGCTGACATTTAAGAAAAAGCTGTTTCGGGAGTCGGATGAAGCTGTCATAGATCCAATGTTTGTGCAGTTGTCCTACGTTCAGTTGCAACATGATTATATACTGGGAAATTATCCTGTTGGAAGAGATGATGCTGCCCAGCTGTCTGCATTGCAAATCTTGGTTGACATCGGATTTCTGCGCAATCCTGAATCATGCACTGACTGGAATTTGCTTTTGGAACGCTTCCTACCCAGACAAATCGCAATGACACGAGCAAAACGAGAGTGGGAGTTTGATATTCTTTCTCGTTACCATTCAATGGAAAATTTGACAAAAGATGATGCAAGACAACAATTTTTGAGAATACTGAGACAACTTCCTTATGGGAATTCAGTCTTCTTCAGTGTTCGCAAGATTGATCGATCCCATTGGACTTCTTCCAGGGAAAATTATTTTGGGCATCAACAAAAGAGGGGTTCATTTTTTCCGTCCAGTTCCAAAGGAATATCTACATTCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000226 GO:0000902 GO:0000904 GO:0001578 GO:0003002 GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005881 GO:0005938 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007154 GO:0007267 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009524 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0015630 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030154 GO:0030554 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0036094 GO:0042623 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043531 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0044877 GO:0045165 GO:0045168 GO:0046872 GO:0046983 GO:0048468 GO:0048629 GO:0048856 GO:0048869 GO:0051015 GO:0055028 GO:0071840 GO:0071944 GO:0072686 GO:0090558 GO:0090626 GO:0097159 GO:0097367 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901265 GO:1901363 GO:1990939
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FERM_M FERM_N Kinesin MyTH4

Protein Analysis

334

Amino Acids

37.87

Weight (kDa)

6.47

Isoelectric Point (pI)

47.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 680
AccB7I CCANNNNNTGG 1 cut(s) 799
AccII CGCG 1 cut(s) 183
AciI CCGC 3 cut(s) 181, 358, 462
AclWI GGATC 5 cut(s) 383, 447, 477, 545, 897
AcsI RAATTY 3 cut(s) 706, 805, 868
AcuI CTGAAG 1 cut(s) 865
AdeI CACNNNGTG 1 cut(s) 83
AfaI GTAC 1 cut(s) 431
AfeI AGCGCT 1 cut(s) 198
AfiI CCNNNNNNNGG 2 cut(s) 392, 799
AgsI TTSAA 5 cut(s) 139, 194, 254, 353, 798
AjnI CCWGG 3 cut(s) 175, 391, 920
AjuI GAANNNNNNNTTGG 4 cut(s) 698, 730, 918, 950
AluBI AGCT 8 cut(s) 217, 329, 339, 502, 520, 542, 640, 999
AluI AGCT 8 cut(s) 217, 329, 339, 502, 520, 542, 640, 999
Alw26I GTCTC 1 cut(s) 844
AlwI GGATC 5 cut(s) 383, 447, 477, 545, 897
AlwNI CAGNNNCTG 1 cut(s) 287
Aor51HI AGCGCT 1 cut(s) 198
AoxI GGCC 2 cut(s) 178, 459
ApeKI GCWGC 1 cut(s) 632
ApoI RAATTY 3 cut(s) 706, 805, 868
AseI ATTAAT 1 cut(s) 120
AspA2I CCTAGG 1 cut(s) 161
AspLEI GCGC 2 cut(s) 199, 681
AspS9I GGNCC 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 375
AvaII GGWCC 1 cut(s) 158
AvrII CCTAGG 1 cut(s) 161
BauI CACGAG 1 cut(s) 750
BbsI GAAGAC 1 cut(s) 868
BbvI GCAGC 1 cut(s) 619
BciT130I CCWGG 3 cut(s) 177, 393, 922
BcoDI GTCTC 1 cut(s) 844
BfaI CTAG 3 cut(s) 113, 162, 336
BfoI RGCGCY 1 cut(s) 200
BisI GCNGC 4 cut(s) 181, 358, 462, 633
BlnI CCTAGG 1 cut(s) 161
BlsI GCNGC 4 cut(s) 182, 359, 463, 634
Bme1390I CCNGG 3 cut(s) 177, 393, 922
Bme18I GGWCC 1 cut(s) 158
BmgT120I GGNCC 1 cut(s) 158
BmiI GGNNCC 1 cut(s) 376
BmrFI CCNGG 3 cut(s) 177, 393, 922
BmrI ACTGGG 1 cut(s) 611
BmsI GCATC 4 cut(s) 280, 619, 811, 949
BmuI ACTGGG 1 cut(s) 611
BpiI GAAGAC 1 cut(s) 868
BpuEI CTTGAG 1 cut(s) 440
Bsa29I ATCGAT 1 cut(s) 901
BsaJI CCNNGG 2 cut(s) 161, 921
Bsc4I CCNNNNNNNGG 2 cut(s) 392, 799
Bse1I ACTGG 5 cut(s) 211, 376, 606, 707, 972
Bse3DI GCAATG 3 cut(s) 493, 647, 750
BseBI CCWGG 3 cut(s) 177, 393, 922
BseCI ATCGAT 1 cut(s) 901
BseDI CCNNGG 2 cut(s) 161, 921
BseGI GGATG 3 cut(s) 14, 247, 541
BseLI CCNNNNNNNGG 2 cut(s) 392, 799
BseMI GCAATG 3 cut(s) 493, 647, 750
BseMII CTCAG 3 cut(s) 90, 339, 839
BseNI ACTGG 5 cut(s) 211, 376, 606, 707, 972
BseRI GAGGAG 2 cut(s) 200, 416
BseXI GCAGC 1 cut(s) 619
BseYI CCCAGC 1 cut(s) 636
BsgI GTGCAG 1 cut(s) 584
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 2 cut(s) 180, 461
BshVI ATCGAT 1 cut(s) 901
BslI CCNNNNNNNGG 2 cut(s) 392, 799
BsmAI GTCTC 1 cut(s) 844
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 2 cut(s) 180, 461
Bsp143I GATC 6 cut(s) 388, 439, 469, 550, 898, 902
BspACI CCGC 3 cut(s) 181, 358, 462
BspANI GGCC 2 cut(s) 180, 461
BspCNI CTCAG 3 cut(s) 91, 338, 840
BspDI ATCGAT 1 cut(s) 901
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 1 cut(s) 376
BspPI GGATC 5 cut(s) 383, 447, 477, 545, 897
BsrDI GCAATG 3 cut(s) 493, 647, 750
BsrI ACTGG 5 cut(s) 211, 376, 606, 707, 972
BssECI CCNNGG 2 cut(s) 161, 921
BssMI GATC 6 cut(s) 388, 439, 469, 550, 898, 902
BssSI CACGAG 1 cut(s) 750
BssT1I CCWWGG 1 cut(s) 161
Bst2BI CACGAG 1 cut(s) 750
Bst2UI CCWGG 3 cut(s) 177, 393, 922
Bst4CI ACNGT 1 cut(s) 283
Bst6I CTCTTC 1 cut(s) 616
BstC8I GCNNGC 1 cut(s) 500
BstDEI CTNAG 3 cut(s) 99, 325, 848
BstF5I GGATG 3 cut(s) 14, 247, 541
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 1 cut(s) 200
BstHHI GCGC 2 cut(s) 199, 681
BstKTI GATC 6 cut(s) 391, 442, 472, 553, 901, 905
BstMAI GTCTC 1 cut(s) 844
BstMBI GATC 6 cut(s) 388, 439, 469, 550, 898, 902
BstMWI GCNNNNNNNGC 1 cut(s) 499
BstNI CCWGG 3 cut(s) 177, 393, 922
BstSCI CCNGG 3 cut(s) 175, 391, 920
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 1 cut(s) 619
BstV2I GAAGAC 1 cut(s) 868
BstX2I RGATCY 2 cut(s) 439, 550
BstYI RGATCY 2 cut(s) 439, 550
Bsu15I ATCGAT 1 cut(s) 901
BsuRI GGCC 2 cut(s) 180, 461
BsuTUI ATCGAT 1 cut(s) 901
BtsCI GGATG 3 cut(s) 14, 247, 541
BtsIMutI CAGTG 3 cut(s) 288, 696, 889
Cac8I GCNNGC 1 cut(s) 500
CaiI CAGNNNCTG 1 cut(s) 287
CfoI GCGC 2 cut(s) 199, 681
Cfr13I GGNCC 1 cut(s) 158
ClaI ATCGAT 1 cut(s) 901
Csp6I GTAC 1 cut(s) 430
CspCI CAANNNNNGTGG 2 cut(s) 264, 299
CviAII CATG 3 cut(s) 80, 590, 693
CviQI GTAC 1 cut(s) 430
DdeI CTNAG 3 cut(s) 99, 325, 848
DpnI GATC 6 cut(s) 390, 441, 471, 552, 900, 904
DpnII GATC 6 cut(s) 388, 439, 469, 550, 898, 902
DraIII CACNNNGTG 1 cut(s) 83
Eam1104I CTCTTC 1 cut(s) 616
EarI CTCTTC 1 cut(s) 616
Eco130I CCWWGG 1 cut(s) 161
Eco47I GGWCC 1 cut(s) 158
Eco47III AGCGCT 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 865
EcoRI GAATTC 1 cut(s) 868
EcoRII CCWGG 3 cut(s) 175, 391, 920
EcoT14I CCWWGG 1 cut(s) 161
ErhI CCWWGG 1 cut(s) 161
FaeI CATG 3 cut(s) 83, 593, 696
FatI CATG 3 cut(s) 79, 589, 692
FauNDI CATATG 1 cut(s) 265
Fnu4HI GCNGC 4 cut(s) 181, 358, 462, 633
FokI GGATG 2 cut(s) 254, 548
Fsp4HI GCNGC 4 cut(s) 181, 358, 462, 633
FspBI CTAG 3 cut(s) 113, 162, 336
FspI TGCGCA 1 cut(s) 680
GlaI GCGC 2 cut(s) 198, 680
GluI GCNGC 4 cut(s) 181, 358, 462, 633
GsaI CCCAGC 1 cut(s) 640
HaeII RGCGCY 1 cut(s) 200
HaeIII GGCC 2 cut(s) 180, 461
HhaI GCGC 2 cut(s) 199, 681
Hin1II CATG 3 cut(s) 83, 593, 696
Hin6I GCGC 2 cut(s) 197, 679
HinP1I GCGC 2 cut(s) 197, 679
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HinfI GANTC 3 cut(s) 95, 530, 689
HphI GGTGA 1 cut(s) 375
Hpy166II GTNNAC 2 cut(s) 67, 664
Hpy188I TCNGA 5 cut(s) 30, 58, 100, 535, 671
Hpy188III TCNNGA 2 cut(s) 527, 686
Hpy8I GTNNAC 2 cut(s) 67, 664
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4IV ACGT 1 cut(s) 576
HpyCH4V TGCA 9 cut(s) 308, 493, 498, 565, 586, 647, 652, 696, 824
HpyF10VI GCNNNNNNNGC 1 cut(s) 499
HpyF3I CTNAG 3 cut(s) 99, 325, 848
HpySE526I ACGT 1 cut(s) 576
Hsp92II CATG 3 cut(s) 83, 593, 696
HspAI GCGC 2 cut(s) 197, 679
Kzo9I GATC 6 cut(s) 388, 439, 469, 550, 898, 902
LmnI GCTCC 1 cut(s) 380
Lsp1109I GCAGC 1 cut(s) 619
LweI GCATC 4 cut(s) 280, 619, 811, 949
MaeI CTAG 3 cut(s) 113, 162, 336
MaeII ACGT 1 cut(s) 576
MaeIII GTNAC 2 cut(s) 367, 788
MalI GATC 6 cut(s) 390, 441, 471, 552, 900, 904
MboI GATC 6 cut(s) 388, 439, 469, 550, 898, 902
MboII GAAGA 5 cut(s) 266, 633, 868, 871, 909
MfeI CAATTG 1 cut(s) 225
MflI RGATCY 2 cut(s) 439, 550
MluCI AATT 9 cut(s) 117, 225, 315, 607, 706, 805, 833, 868, 928
MlyI GAGTC 2 cut(s) 89, 539
MmeI TCCRAC 2 cut(s) 513, 598
MnlI CCTC 7 cut(s) 28, 36, 94, 178, 292, 394, 945
MseI TTAA 5 cut(s) 120, 128, 203, 318, 510
MspA1I CMGCKG 2 cut(s) 640, 999
MspR9I CCNGG 3 cut(s) 177, 393, 922
MunI CAATTG 1 cut(s) 225
Mva1269I GAATGC 1 cut(s) 359
MvaI CCWGG 3 cut(s) 177, 393, 922
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 1 cut(s) 499
NdeI CATATG 1 cut(s) 265
NdeII GATC 6 cut(s) 388, 439, 469, 550, 898, 902
NlaIII CATG 3 cut(s) 83, 593, 696
NlaIV GGNNCC 1 cut(s) 376
NsbI TGCGCA 1 cut(s) 680
PcsI WCGNNNNNNNCGW 1 cut(s) 757
PctI GAATGC 1 cut(s) 359
PfeI GAWTC 1 cut(s) 689
PflMI CCANNNNNTGG 1 cut(s) 799
PfoI TCCNGGA 1 cut(s) 391
PkrI GCNGC 4 cut(s) 182, 359, 463, 634
PleI GAGTC 2 cut(s) 89, 538
PpsI GAGTC 2 cut(s) 89, 538
PshBI ATTAAT 1 cut(s) 120
Psp6I CCWGG 3 cut(s) 175, 391, 920
PspFI CCCAGC 1 cut(s) 636
PspGI CCWGG 3 cut(s) 175, 391, 920
PspN4I GGNNCC 1 cut(s) 376
PspPI GGNCC 1 cut(s) 158
PsrI GAACNNNNNNTAC 2 cut(s) 711, 743
PstNI CAGNNNCTG 1 cut(s) 287
PsuI RGATCY 2 cut(s) 439, 550
PvuII CAGCTG 2 cut(s) 640, 999
RsaI GTAC 1 cut(s) 431
RsaNI GTAC 1 cut(s) 430
SaqAI TTAA 5 cut(s) 120, 128, 203, 318, 510
SatI GCNGC 4 cut(s) 181, 358, 462, 633
Sau3AI GATC 6 cut(s) 388, 439, 469, 550, 898, 902
Sau96I GGNCC 1 cut(s) 158
SchI GAGTC 2 cut(s) 89, 539
ScrFI CCNGG 3 cut(s) 177, 393, 922
SfaNI GCATC 4 cut(s) 280, 619, 811, 949
SinI GGWCC 1 cut(s) 158
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
Sse9I AATT 9 cut(s) 117, 225, 315, 607, 706, 805, 833, 868, 928
SsiI CCGC 3 cut(s) 181, 358, 462
SspI AATATT 2 cut(s) 91, 489
SspMI CTAG 3 cut(s) 113, 162, 336
StyD4I CCNGG 3 cut(s) 175, 391, 920
StyI CCWWGG 1 cut(s) 161
TaaI ACNGT 1 cut(s) 283
TaiI ACGT 1 cut(s) 579
TaqI TCGA 4 cut(s) 106, 211, 472, 901
TasI AATT 9 cut(s) 117, 225, 315, 607, 706, 805, 833, 868, 928
TatI WGTACW 1 cut(s) 429
TauI GCSGC 3 cut(s) 183, 360, 464
TfiI GAWTC 1 cut(s) 689
Tru1I TTAA 5 cut(s) 120, 128, 203, 318, 510
Tru9I TTAA 5 cut(s) 120, 128, 203, 318, 510
TscAI CASTG 3 cut(s) 288, 703, 889
TseI GCWGC 1 cut(s) 632
TspDTI ATGAA 4 cut(s) 258, 282, 552, 948
TspGWI ACGGA 1 cut(s) 957
TspRI CASTG 3 cut(s) 288, 703, 889
Van91I CCANNNNNTGG 1 cut(s) 799
VpaK11BI GGWCC 1 cut(s) 158
VspI ATTAAT 1 cut(s) 120
XapI RAATTY 3 cut(s) 706, 805, 868
XmaJI CCTAGG 1 cut(s) 161
XspI CTAG 3 cut(s) 113, 162, 336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.