Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0014050

Physical Location & Seq

Genomic Coordinates Forward (+)

18503772 .. 18504807

Gene Structure 1036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g20370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 858 bp

ATGCCAGCAGGCGAGCTTTTGCACGAGTCATCAGAAGCCGAGGGCGAGGTGCGGGTGTGGGCCCAGATAAAAACTGAGGTAAAACGTGACGCTGAGTCTGAGCCAGCACTTGCAAGCTATTTGTACTCGACAATACTCTCGCATTCATCATTGGAGCGCTCACTGTCATTTCACTTGGGGAATAAGCTGTGCTCGTCCACTCTCCTCTCGACGCTCCTCTATGATCTATTCCTCGATGCGTTTTCCTCTGATCCCTCTCTACGCGCTGCCACGGTAGCTGATCTATGCGCTGTACATGAACGTGATCCTGCTTGCGTCTCATACTCTCACTGTTTACTCAATTACAAGGGCTTCCTGGCCTGTCAGGCTCAGCGAGTAGCGCATAAGTTGTGGAGTCAGTCACGTAAACCACTAGCACTAGCACTCCAGTCACGAATTGCGGATGTGTTTTCCGTGGACATTCACCCAGCTGCAAGGATCGGTAAAGGTGTTCTGCTCGACCACGCAACGGGCGTTGTGGTTGGGGAGACAGCAGTTATAGGAAACAATGTGTCAATATTGCACCACGTGACACTAGGTGGGACGGGAAAGGTGGGTGGAGACAGGCACCCAAAGATTGGTGATGGTGTACTAATTGGTGCAGGTGCAACAATTCTGGGAAACGTGACGATCGGTGAGGGTGCAAAGATTGGGGCGGGGTCAGTGGTGCTTATCGATGTGCCACCGTGGACGACGGCAGTGGGGAATCCGGCAAGGTTGGTCGGAGGGAAGGAGCGGCCCTCTAAACATGAGGATGTGCCAGGGGAGTCTATGGACCATACCTCCTTTATGTCTGAATGGTCTGATTACATAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006534 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008374 GO:0008652 GO:0009001 GO:0009058 GO:0009069 GO:0009070 GO:0009987 GO:0016053 GO:0016407 GO:0016412 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019344 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00920 ko01100 ko01110 ko01120 ko01200 ko01230 ko05111 map00270 map00920 map01100 map01110 map01120 map01200 map01230 map05111

Pfam Domains

Protein Families

Hexapep SATase_N

Protein Analysis

286

Amino Acids

30.28

Weight (kDa)

5.98

Isoelectric Point (pI)

35.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SATase_N	PF06426	19 - 123	3.4e-37	Serine acetyltransferase, N-terminal
Hexapep	PF00132	203 - 236	1.6e-11	Bacterial transferase hexapeptide (six repeats)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56760
fragaria_vesca	FvH4_1g07140
malus_domestica	MD02G1075800.v1.1 MD02G1238300.v1.1
prunus_persica	Prupe.7G212700_v2.0.a1
pyrus_communis	pycom02g20370 pycom02g21490
rosa_chinensis	RchiOBHm_Chr2g0093021
rosa_laevigata	RLG00000016360
rosa_multiflora	Rmu_sc0000965.1_g000024 Rmu_sc0007577.1_g000001
rosa_roxburghii	Rroxscaffold_2G00148610
rosa_rugosa	Rorug02G0031500
rosa_samantha	Rh2AG077300 Rh2BG078700 Rh2CG080900
rosa_wichuraiana	Rw2G006890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	632
Acc36I	ACCTGC	1 cut(s)	632
AccB1I	GGYRCC	1 cut(s)	606
AccB7I	CCANNNNNTGG	1 cut(s)	617
AccBSI	CCGCTC	1 cut(s)	775
AccII	CGCG	1 cut(s)	264
AciI	CCGC	4 cut(s)	52, 440, 695, 775
AclWI	GGATC	3 cut(s)	245, 299, 485
AcvI	CACGTG	1 cut(s)	568
AdeI	CACNNNGTG	2 cut(s)	568, 578
AfaI	GTAC	3 cut(s)	125, 294, 630
AfeI	AGCGCT	1 cut(s)	158
AfiI	CCNNNNNNNGG	2 cut(s)	508, 617
AhdI	GACNNNNNGTC	1 cut(s)	94
AjnI	CCWGG	2 cut(s)	354, 799
AluBI	AGCT	5 cut(s)	16, 117, 187, 278, 470
AluI	AGCT	5 cut(s)	16, 117, 187, 278, 470
Alw21I	GWGCWC	1 cut(s)	194
Alw26I	GTCTC	3 cut(s)	322, 521, 594
AlwI	GGATC	3 cut(s)	245, 299, 485
Aor51HI	AGCGCT	1 cut(s)	158
AoxI	GGCC	3 cut(s)	60, 357, 776
ApaI	GGGCCC	1 cut(s)	64
ApeKI	GCWGC	2 cut(s)	266, 470
AspLEI	GCGC	4 cut(s)	159, 266, 290, 382
AspS9I	GGNCC	4 cut(s)	60, 61, 777, 814
AsuHPI	GGTGA	3 cut(s)	455, 632, 686
AvaII	GGWCC	1 cut(s)	814
BaeGI	GKGCMC	1 cut(s)	64
BanI	GGYRCC	1 cut(s)	606
BanII	GRGCYC	1 cut(s)	64
BauI	CACGAG	1 cut(s)	23
BbrPI	CACGTG	1 cut(s)	568
Bbv12I	GWGCWC	1 cut(s)	194
BbvI	GCAGC	2 cut(s)	253, 457
BccI	CCATC	1 cut(s)	617
BceAI	ACGGC	1 cut(s)	750
BciT130I	CCWGG	2 cut(s)	356, 801
BcoDI	GTCTC	3 cut(s)	322, 521, 594
BfaI	CTAG	3 cut(s)	413, 419, 575
BfoI	RGCGCY	1 cut(s)	160
BfuAI	ACCTGC	1 cut(s)	632
BglI	GCCNNNNNGGC	1 cut(s)	365
BisI	GCNGC	3 cut(s)	267, 471, 776
BlpI	GCTNAGC	1 cut(s)	369
BlsI	GCNGC	3 cut(s)	268, 472, 777
Bme1390I	CCNGG	2 cut(s)	356, 801
Bme18I	GGWCC	1 cut(s)	814
BmeRI	GACNNNNNGTC	1 cut(s)	94
BmgT120I	GGNCC	4 cut(s)	60, 61, 777, 814
BmiI	GGNNCC	2 cut(s)	62, 608
BmrFI	CCNGG	2 cut(s)	356, 801
BmsI	GCATC	1 cut(s)	226
BplI	GAGNNNNNCTC	2 cut(s)	764, 796
BpmI	CTGGAG	1 cut(s)	410
Bpu1102I	GCTNAGC	1 cut(s)	369
Bsa29I	ATCGAT	1 cut(s)	714
BsaAI	YACGTR	2 cut(s)	404, 568
BsaJI	CCNNGG	5 cut(s)	39, 270, 453, 725, 800
BsaXI	ACNNNNNCTCC	4 cut(s)	408, 438, 806, 836
Bsc4I	CCNNNNNNNGG	2 cut(s)	508, 617
Bse1I	ACTGG	1 cut(s)	427
BseBI	CCWGG	2 cut(s)	356, 801
BseCI	ATCGAT	1 cut(s)	714
BseDI	CCNNGG	5 cut(s)	39, 270, 453, 725, 800
BseGI	GGATG	2 cut(s)	448, 799
BseLI	CCNNNNNNNGG	2 cut(s)	508, 617
BseMII	CTCAG	4 cut(s)	66, 84, 90, 383
BseNI	ACTGG	1 cut(s)	427
BseRI	GAGGAG	2 cut(s)	194, 206
BseSI	GKGCMC	1 cut(s)	64
BseXI	GCAGC	2 cut(s)	253, 457
BseYI	CCCAGC	1 cut(s)	466
BsgI	GTGCAG	1 cut(s)	660
Bsh1236I	CGCG	1 cut(s)	264
Bsh1285I	CGRYCG	1 cut(s)	672
BshFI	GGCC	3 cut(s)	62, 359, 778
BshNI	GGYRCC	1 cut(s)	606
BshVI	ATCGAT	1 cut(s)	714
BsiEI	CGRYCG	1 cut(s)	672
BsiHKAI	GWGCWC	1 cut(s)	194
BsiSI	CCGG	1 cut(s)	749
BslFI	GGGAC	1 cut(s)	595
BslI	CCNNNNNNNGG	2 cut(s)	508, 617
BsmAI	GTCTC	3 cut(s)	322, 521, 594
BsmBI	CGTCTC	1 cut(s)	322
BsmFI	GGGAC	1 cut(s)	595
BsmI	GAATGC	1 cut(s)	142
BsnI	GGCC	3 cut(s)	62, 359, 778
Bsp120I	GGGCCC	1 cut(s)	60
Bsp1286I	GDGCHC	2 cut(s)	64, 194
Bsp1407I	TGTACA	1 cut(s)	292
Bsp143I	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
Bsp1720I	GCTNAGC	1 cut(s)	369
BspACI	CCGC	4 cut(s)	52, 440, 695, 775
BspANI	GGCC	3 cut(s)	62, 359, 778
BspCNI	CTCAG	4 cut(s)	67, 85, 91, 382
BspDI	ATCGAT	1 cut(s)	714
BspFNI	CGCG	1 cut(s)	264
BspLI	GGNNCC	2 cut(s)	62, 608
BspMI	ACCTGC	1 cut(s)	632
BspPI	GGATC	3 cut(s)	245, 299, 485
BspT107I	GGYRCC	1 cut(s)	606
BsrBI	CCGCTC	1 cut(s)	775
BsrGI	TGTACA	1 cut(s)	292
BsrI	ACTGG	1 cut(s)	427
BssECI	CCNNGG	5 cut(s)	39, 270, 453, 725, 800
BssMI	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
BssSI	CACGAG	1 cut(s)	23
Bst2BI	CACGAG	1 cut(s)	23
Bst2UI	CCWGG	2 cut(s)	356, 801
Bst4CI	ACNGT	4 cut(s)	165, 274, 332, 726
BstAUI	TGTACA	1 cut(s)	292
BstBAI	YACGTR	2 cut(s)	404, 568
BstC8I	GCNNGC	6 cut(s)	6, 10, 14, 105, 115, 313
BstDEI	CTNAG	4 cut(s)	75, 93, 99, 369
BstDSI	CCRYGG	3 cut(s)	270, 453, 725
BstF5I	GGATG	2 cut(s)	448, 799
BstFNI	CGCG	1 cut(s)	264
BstH2I	RGCGCY	1 cut(s)	160
BstHHI	GCGC	4 cut(s)	159, 266, 290, 382
BstKTI	GATC	6 cut(s)	226, 253, 283, 307, 480, 672
BstMAI	GTCTC	3 cut(s)	322, 521, 594
BstMBI	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
BstMCI	CGRYCG	1 cut(s)	672
BstMWI	GCNNNNNNNGC	3 cut(s)	275, 365, 379
BstNI	CCWGG	2 cut(s)	356, 801
BstSCI	CCNGG	2 cut(s)	354, 799
BstSLI	GKGCMC	1 cut(s)	64
BstUI	CGCG	1 cut(s)	264
BstV1I	GCAGC	2 cut(s)	253, 457
Bsu15I	ATCGAT	1 cut(s)	714
BsuRI	GGCC	3 cut(s)	62, 359, 778
BsuTUI	ATCGAT	1 cut(s)	714
BtgI	CCRYGG	3 cut(s)	270, 453, 725
BtsCI	GGATG	2 cut(s)	448, 799
BtsI	GCAGTG	1 cut(s)	744
BtsIMutI	CAGTG	4 cut(s)	161, 328, 708, 744
BveI	ACCTGC	1 cut(s)	632
Cac8I	GCNNGC	6 cut(s)	6, 10, 14, 105, 115, 313
CfoI	GCGC	4 cut(s)	159, 266, 290, 382
Cfr13I	GGNCC	4 cut(s)	60, 61, 777, 814
ClaI	ATCGAT	1 cut(s)	714
CseI	GACGC	3 cut(s)	98, 220, 304
Csp6I	GTAC	3 cut(s)	124, 293, 629
CviAII	CATG	2 cut(s)	296, 788
CviQI	GTAC	3 cut(s)	124, 293, 629
DdeI	CTNAG	4 cut(s)	75, 93, 99, 369
DpnI	GATC	6 cut(s)	225, 252, 282, 306, 479, 671
DpnII	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
DraIII	CACNNNGTG	2 cut(s)	568, 578
DriI	GACNNNNNGTC	1 cut(s)	94
Eam1105I	GACNNNNNGTC	1 cut(s)	94
Eco24I	GRGCYC	1 cut(s)	64
Eco47I	GGWCC	1 cut(s)	814
Eco47III	AGCGCT	1 cut(s)	158
Eco72I	CACGTG	1 cut(s)	568
EcoRII	CCWGG	2 cut(s)	354, 799
EcoT38I	GRGCYC	1 cut(s)	64
Esp3I	CGTCTC	1 cut(s)	322
FaeI	CATG	2 cut(s)	299, 791
FaqI	GGGAC	1 cut(s)	595
FatI	CATG	2 cut(s)	295, 787
FauI	CCCGC	2 cut(s)	45, 688
Fnu4HI	GCNGC	3 cut(s)	267, 471, 776
FokI	GGATG	2 cut(s)	455, 806
FriOI	GRGCYC	1 cut(s)	64
Fsp4HI	GCNGC	3 cut(s)	267, 471, 776
FspBI	CTAG	3 cut(s)	413, 419, 575
GlaI	GCGC	4 cut(s)	158, 265, 289, 381
GluI	GCNGC	3 cut(s)	267, 471, 776
GsaI	CCCAGC	1 cut(s)	470
GsuI	CTGGAG	1 cut(s)	410
HaeII	RGCGCY	1 cut(s)	160
HaeIII	GGCC	3 cut(s)	62, 359, 778
HapII	CCGG	1 cut(s)	749
HgaI	GACGC	3 cut(s)	98, 220, 304
HhaI	GCGC	4 cut(s)	159, 266, 290, 382
Hin1II	CATG	2 cut(s)	299, 791
Hin6I	GCGC	4 cut(s)	157, 264, 288, 380
HinP1I	GCGC	4 cut(s)	157, 264, 288, 380
HinfI	GANTC	5 cut(s)	26, 95, 394, 745, 806
HpaII	CCGG	1 cut(s)	749
HphI	GGTGA	3 cut(s)	455, 632, 686
Hpy166II	GTNNAC	6 cut(s)	198, 335, 407, 457, 629, 729
Hpy188I	TCNGA	6 cut(s)	34, 100, 250, 764, 835, 844
Hpy188III	TCNNGA	2 cut(s)	208, 432
Hpy8I	GTNNAC	6 cut(s)	198, 335, 407, 457, 629, 729
Hpy99I	CGWCG	2 cut(s)	214, 736
HpyAV	CCTTC	1 cut(s)	763
HpyCH4III	ACNGT	4 cut(s)	165, 274, 332, 726
HpyCH4IV	ACGT	5 cut(s)	85, 301, 403, 567, 663
HpyCH4V	TGCA	7 cut(s)	22, 113, 473, 562, 641, 647, 683
HpyF10VI	GCNNNNNNNGC	3 cut(s)	275, 365, 379
HpyF3I	CTNAG	4 cut(s)	75, 93, 99, 369
HpySE526I	ACGT	5 cut(s)	85, 301, 403, 567, 663
Hsp92II	CATG	2 cut(s)	299, 791
HspAI	GCGC	4 cut(s)	157, 264, 288, 380
Kzo9I	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
LmnI	GCTCC	3 cut(s)	154, 219, 772
Lsp1109I	GCAGC	2 cut(s)	253, 457
LweI	GCATC	1 cut(s)	226
MaeI	CTAG	3 cut(s)	413, 419, 575
MaeII	ACGT	5 cut(s)	85, 301, 403, 567, 663
MaeIII	GTNAC	5 cut(s)	86, 399, 429, 568, 664
MalI	GATC	6 cut(s)	225, 252, 282, 306, 479, 671
MbiI	CCGCTC	1 cut(s)	775
MboI	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
MhlI	GDGCHC	2 cut(s)	64, 194
MluCI	AATT	5 cut(s)	340, 435, 633, 651, 852
MlyI	GAGTC	4 cut(s)	35, 104, 403, 815
MmeI	TCCRAC	1 cut(s)	742
MslI	CAYNNNNRTG	2 cut(s)	300, 792
MspA1I	CMGCKG	1 cut(s)	470
MspI	CCGG	1 cut(s)	749
MspR9I	CCNGG	2 cut(s)	356, 801
Mva1269I	GAATGC	1 cut(s)	142
MvaI	CCWGG	2 cut(s)	356, 801
MvnI	CGCG	1 cut(s)	264
MwoI	GCNNNNNNNGC	3 cut(s)	275, 365, 379
NdeII	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
NlaIII	CATG	2 cut(s)	299, 791
NlaIV	GGNNCC	2 cut(s)	62, 608
NmeAIII	GCCGAG	1 cut(s)	64
NmuCI	GTSAC	5 cut(s)	86, 399, 429, 568, 664
PaqCI	CACCTGC	1 cut(s)	632
PcsI	WCGNNNNNNNCGW	1 cut(s)	510
PctI	GAATGC	1 cut(s)	142
PfeI	GAWTC	1 cut(s)	745
PflMI	CCANNNNNTGG	1 cut(s)	617
PkrI	GCNGC	3 cut(s)	268, 472, 777
Ple19I	CGATCG	1 cut(s)	672
PleI	GAGTC	4 cut(s)	34, 103, 402, 814
PmaCI	CACGTG	1 cut(s)	568
PmlI	CACGTG	1 cut(s)	568
PpsI	GAGTC	4 cut(s)	34, 103, 402, 814
Ppu21I	YACGTR	2 cut(s)	404, 568
Psp6I	CCWGG	2 cut(s)	354, 799
PspCI	CACGTG	1 cut(s)	568
PspFI	CCCAGC	1 cut(s)	466
PspGI	CCWGG	2 cut(s)	354, 799
PspN4I	GGNNCC	2 cut(s)	62, 608
PspOMI	GGGCCC	1 cut(s)	60
PspPI	GGNCC	4 cut(s)	60, 61, 777, 814
PvuI	CGATCG	1 cut(s)	672
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	3 cut(s)	125, 294, 630
RsaNI	GTAC	3 cut(s)	124, 293, 629
RseI	CAYNNNNRTG	2 cut(s)	300, 792
SatI	GCNGC	3 cut(s)	267, 471, 776
Sau3AI	GATC	6 cut(s)	223, 250, 280, 304, 477, 669
Sau96I	GGNCC	4 cut(s)	60, 61, 777, 814
SchI	GAGTC	4 cut(s)	35, 104, 403, 815
ScrFI	CCNGG	2 cut(s)	356, 801
SduI	GDGCHC	2 cut(s)	64, 194
SfaNI	GCATC	1 cut(s)	226
SinI	GGWCC	1 cut(s)	814
SmiMI	CAYNNNNRTG	2 cut(s)	300, 792
Sse9I	AATT	5 cut(s)	340, 435, 633, 651, 852
SsiI	CCGC	4 cut(s)	52, 440, 695, 775
SspI	AATATT	1 cut(s)	558
SspMI	CTAG	3 cut(s)	413, 419, 575
StyD4I	CCNGG	2 cut(s)	354, 799
TaaI	ACNGT	4 cut(s)	165, 274, 332, 726
TaiI	ACGT	5 cut(s)	88, 304, 406, 570, 666
TaqI	TCGA	5 cut(s)	128, 209, 234, 498, 714
TasI	AATT	5 cut(s)	340, 435, 633, 651, 852
TatI	WGTACW	3 cut(s)	123, 292, 628
TauI	GCSGC	1 cut(s)	778
TfiI	GAWTC	1 cut(s)	745
TscAI	CASTG	4 cut(s)	168, 335, 708, 744
TseFI	GTSAC	5 cut(s)	86, 399, 429, 568, 664
TseI	GCWGC	2 cut(s)	266, 470
Tsp45I	GTSAC	5 cut(s)	86, 399, 429, 568, 664
TspDTI	ATGAA	2 cut(s)	135, 312
TspGWI	ACGGA	1 cut(s)	442
TspRI	CASTG	4 cut(s)	168, 335, 708, 744
Van91I	CCANNNNNTGG	1 cut(s)	617
VpaK11BI	GGWCC	1 cut(s)	814
XspI	CTAG	3 cut(s)	413, 419, 575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.