ABC transporter D family member
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g25840 |
| pyrus_communis | pycom02g21500 pycom07g05110 |
| rosa_multiflora | Rmu_sc0029285.1_g000001 |
| rosa_samantha | Rh3CG299000 Rh3DG294900 |
| rosa_wichuraiana | Rw0G006740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1741 |
| AciI | CCGC | 3 cut(s) | 472, 951, 1299 |
| AclWI | GGATC | 4 cut(s) | 10, 253, 266, 1359 |
| AcoI | YGGCCR | 1 cut(s) | 1128 |
| AcsI | RAATTY | 4 cut(s) | 128, 542, 963, 1607 |
| AcuI | CTGAAG | 3 cut(s) | 170, 1092, 1113 |
| AfaI | GTAC | 2 cut(s) | 12, 1155 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 545, 1052, 1741 |
| AflIII | ACRYGT | 4 cut(s) | 324, 1142, 1270, 1331 |
| AgsI | TTSAA | 9 cut(s) | 7, 578, 671, 682, 715, 941, 977, 1402, 1655 |
| AjnI | CCWGG | 5 cut(s) | 236, 446, 1130, 1156, 1740 |
| Alw21I | GWGCWC | 3 cut(s) | 46, 616, 984 |
| AlwI | GGATC | 4 cut(s) | 10, 253, 266, 1359 |
| AoxI | GGCC | 3 cut(s) | 1128, 1232, 1715 |
| ApeKI | GCWGC | 2 cut(s) | 152, 194 |
| ApoI | RAATTY | 4 cut(s) | 128, 542, 963, 1607 |
| AseI | ATTAAT | 1 cut(s) | 830 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1201 |
| AspS9I | GGNCC | 3 cut(s) | 367, 1181, 1233 |
| AsuHPI | GGTGA | 9 cut(s) | 436, 560, 568, 857, 920, 1035, 1099, 1430, 1775 |
| AvaII | GGWCC | 2 cut(s) | 367, 1181 |
| BalI | TGGCCA | 1 cut(s) | 1130 |
| BamHI | GGATCC | 1 cut(s) | 258 |
| BanII | GRGCYC | 1 cut(s) | 984 |
| BauI | CACGAG | 2 cut(s) | 68, 1240 |
| BbsI | GAAGAC | 2 cut(s) | 310, 1287 |
| Bbv12I | GWGCWC | 3 cut(s) | 46, 616, 984 |
| BbvCI | CCTCAGC | 1 cut(s) | 1317 |
| BbvI | GCAGC | 2 cut(s) | 164, 181 |
| BccI | CCATC | 7 cut(s) | 246, 430, 1054, 1120, 1244, 1622, 1754 |
| BceAI | ACGGC | 1 cut(s) | 1730 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 611, 645 |
| BciT130I | CCWGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| BclI | TGATCA | 1 cut(s) | 694 |
| BfaI | CTAG | 6 cut(s) | 371, 509, 515, 651, 986, 1448 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 242 |
| BisI | GCNGC | 3 cut(s) | 153, 195, 952 |
| BlsI | GCNGC | 3 cut(s) | 154, 196, 953 |
| BmcAI | AGTACT | 1 cut(s) | 12 |
| Bme1390I | CCNGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| Bme18I | GGWCC | 2 cut(s) | 367, 1181 |
| BmgT120I | GGNCC | 3 cut(s) | 367, 1181, 1233 |
| BmiI | GGNNCC | 2 cut(s) | 118, 260 |
| BmrFI | CCNGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| BmrI | ACTGGG | 1 cut(s) | 1783 |
| BmsI | GCATC | 5 cut(s) | 334, 884, 963, 1066, 1513 |
| BmuI | ACTGGG | 1 cut(s) | 1783 |
| BpiI | GAAGAC | 2 cut(s) | 310, 1287 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 346, 378 |
| BpmI | CTGGAG | 2 cut(s) | 469, 1493 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1317 |
| BpuEI | CTTGAG | 3 cut(s) | 266, 313, 825 |
| BsaBI | GATNNNNATC | 2 cut(s) | 348, 1527 |
| BsaJI | CCNNGG | 3 cut(s) | 804, 1157, 1740 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 247, 277 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 545, 1052, 1741 |
| Bse118I | RCCGGY | 1 cut(s) | 1668 |
| Bse1I | ACTGG | 4 cut(s) | 405, 855, 1183, 1778 |
| Bse3DI | GCAATG | 2 cut(s) | 207, 860 |
| Bse8I | GATNNNNATC | 2 cut(s) | 348, 1527 |
| BseBI | CCWGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| BseDI | CCNNGG | 3 cut(s) | 804, 1157, 1740 |
| BseGI | GGATG | 3 cut(s) | 257, 1528, 1614 |
| BseJI | GATNNNNATC | 2 cut(s) | 348, 1527 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 545, 1052, 1741 |
| BseMI | GCAATG | 2 cut(s) | 207, 860 |
| BseMII | CTCAG | 4 cut(s) | 377, 1331, 1337, 1377 |
| BseNI | ACTGG | 4 cut(s) | 405, 855, 1183, 1778 |
| BseRI | GAGGAG | 2 cut(s) | 691, 694 |
| BseXI | GCAGC | 2 cut(s) | 164, 181 |
| BshFI | GGCC | 3 cut(s) | 1130, 1234, 1717 |
| BsiHKAI | GWGCWC | 3 cut(s) | 46, 616, 984 |
| BsiSI | CCGG | 1 cut(s) | 1669 |
| BslFI | GGGAC | 1 cut(s) | 411 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 545, 1052, 1741 |
| BsmFI | GGGAC | 1 cut(s) | 411 |
| BsmI | GAATGC | 1 cut(s) | 1631 |
| BsnI | GGCC | 3 cut(s) | 1130, 1234, 1717 |
| Bsp1286I | GDGCHC | 3 cut(s) | 46, 616, 984 |
| Bsp143I | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| Bsp19I | CCATGG | 1 cut(s) | 804 |
| BspACI | CCGC | 3 cut(s) | 472, 951, 1299 |
| BspANI | GGCC | 3 cut(s) | 1130, 1234, 1717 |
| BspCNI | CTCAG | 4 cut(s) | 376, 1330, 1338, 1378 |
| BspLI | GGNNCC | 2 cut(s) | 118, 260 |
| BspPI | GGATC | 4 cut(s) | 10, 253, 266, 1359 |
| BspQI | GCTCTTC | 2 cut(s) | 69, 972 |
| BsrDI | GCAATG | 2 cut(s) | 207, 860 |
| BsrFI | RCCGGY | 1 cut(s) | 1668 |
| BsrI | ACTGG | 4 cut(s) | 405, 855, 1183, 1778 |
| BssAI | RCCGGY | 1 cut(s) | 1668 |
| BssECI | CCNNGG | 3 cut(s) | 804, 1157, 1740 |
| BssMI | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| BssSI | CACGAG | 2 cut(s) | 68, 1240 |
| BssT1I | CCWWGG | 1 cut(s) | 804 |
| Bst2BI | CACGAG | 2 cut(s) | 68, 1240 |
| Bst2UI | CCWGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| Bst4CI | ACNGT | 8 cut(s) | 25, 124, 945, 1033, 1263, 1696, 1731, 1752 |
| Bst6I | CTCTTC | 2 cut(s) | 69, 972 |
| BstC8I | GCNNGC | 7 cut(s) | 54, 243, 612, 1169, 1585, 1674, 1719 |
| BstDEI | CTNAG | 8 cut(s) | 363, 675, 871, 1050, 1220, 1317, 1346, 1386 |
| BstDSI | CCRYGG | 1 cut(s) | 804 |
| BstF5I | GGATG | 3 cut(s) | 257, 1528, 1614 |
| BstKTI | GATC | 7 cut(s) | 18, 97, 261, 352, 697, 823, 1354 |
| BstMBI | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 242, 979, 1296, 1584 |
| BstNI | CCWGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| BstNSI | RCATGY | 6 cut(s) | 328, 860, 1146, 1274, 1335, 1456 |
| BstSCI | CCNGG | 5 cut(s) | 236, 446, 1130, 1156, 1740 |
| BstV1I | GCAGC | 2 cut(s) | 164, 181 |
| BstV2I | GAAGAC | 2 cut(s) | 310, 1287 |
| BstX2I | RGATCY | 1 cut(s) | 258 |
| BstYI | RGATCY | 1 cut(s) | 258 |
| BsuRI | GGCC | 3 cut(s) | 1130, 1234, 1717 |
| BtgI | CCRYGG | 1 cut(s) | 804 |
| BtsCI | GGATG | 3 cut(s) | 257, 1528, 1614 |
| BtsIMutI | CAGTG | 2 cut(s) | 120, 1343 |
| Cac8I | GCNNGC | 7 cut(s) | 54, 243, 612, 1169, 1585, 1674, 1719 |
| Cfr10I | RCCGGY | 1 cut(s) | 1668 |
| Cfr13I | GGNCC | 3 cut(s) | 367, 1181, 1233 |
| CseI | GACGC | 1 cut(s) | 186 |
| Csp6I | GTAC | 2 cut(s) | 11, 1154 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 10, 45 |
| CviQI | GTAC | 2 cut(s) | 11, 1154 |
| DdeI | CTNAG | 8 cut(s) | 363, 675, 871, 1050, 1220, 1317, 1346, 1386 |
| DpnI | GATC | 7 cut(s) | 17, 96, 260, 351, 696, 822, 1353 |
| DpnII | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| EaeI | YGGCCR | 1 cut(s) | 1128 |
| Eam1104I | CTCTTC | 2 cut(s) | 69, 972 |
| EarI | CTCTTC | 2 cut(s) | 69, 972 |
| EciI | GGCGGA | 1 cut(s) | 487 |
| Ecl136II | GAGCTC | 1 cut(s) | 982 |
| Eco130I | CCWWGG | 1 cut(s) | 804 |
| Eco24I | GRGCYC | 1 cut(s) | 984 |
| Eco47I | GGWCC | 2 cut(s) | 367, 1181 |
| Eco53kI | GAGCTC | 1 cut(s) | 982 |
| Eco57I | CTGAAG | 3 cut(s) | 170, 1092, 1113 |
| EcoICRI | GAGCTC | 1 cut(s) | 982 |
| EcoO109I | RGGNCCY | 1 cut(s) | 367 |
| EcoRII | CCWGG | 5 cut(s) | 236, 446, 1130, 1156, 1740 |
| EcoT14I | CCWWGG | 1 cut(s) | 804 |
| EcoT22I | ATGCAT | 3 cut(s) | 307, 600, 862 |
| EcoT38I | GRGCYC | 1 cut(s) | 984 |
| ErhI | CCWWGG | 1 cut(s) | 804 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 140, 172, 275, 307, 1647, 1679 |
| FaqI | GGGAC | 1 cut(s) | 411 |
| FbaI | TGATCA | 1 cut(s) | 694 |
| Fnu4HI | GCNGC | 3 cut(s) | 153, 195, 952 |
| FokI | GGATG | 3 cut(s) | 264, 1535, 1601 |
| FriOI | GRGCYC | 1 cut(s) | 984 |
| Fsp4HI | GCNGC | 3 cut(s) | 153, 195, 952 |
| FspBI | CTAG | 6 cut(s) | 371, 509, 515, 651, 986, 1448 |
| GluI | GCNGC | 3 cut(s) | 153, 195, 952 |
| GsuI | CTGGAG | 2 cut(s) | 469, 1493 |
| HaeIII | GGCC | 3 cut(s) | 1130, 1234, 1717 |
| HapII | CCGG | 1 cut(s) | 1669 |
| HgaI | GACGC | 1 cut(s) | 186 |
| HincII | GTYRAC | 2 cut(s) | 381, 1140 |
| HindII | GTYRAC | 2 cut(s) | 381, 1140 |
| HindIII | AAGCTT | 3 cut(s) | 458, 892, 1165 |
| HinfI | GANTC | 6 cut(s) | 559, 623, 671, 1215, 1251, 1528 |
| HpaI | GTTAAC | 2 cut(s) | 381, 1140 |
| HpaII | CCGG | 1 cut(s) | 1669 |
| HphI | GGTGA | 9 cut(s) | 436, 560, 568, 857, 920, 1035, 1099, 1430, 1775 |
| Hpy166II | GTNNAC | 5 cut(s) | 381, 430, 444, 848, 1140 |
| Hpy188I | TCNGA | 8 cut(s) | 94, 189, 354, 388, 1072, 1093, 1432, 1533 |
| Hpy8I | GTNNAC | 5 cut(s) | 381, 430, 444, 848, 1140 |
| Hpy99I | CGWCG | 1 cut(s) | 202 |
| HpyAV | CCTTC | 5 cut(s) | 214, 225, 572, 1409, 1505 |
| HpyCH4III | ACNGT | 8 cut(s) | 25, 124, 945, 1033, 1263, 1696, 1731, 1752 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 242, 979, 1296, 1584 |
| HpyF3I | CTNAG | 8 cut(s) | 363, 675, 871, 1050, 1220, 1317, 1346, 1386 |
| Ksp22I | TGATCA | 1 cut(s) | 694 |
| KspAI | GTTAAC | 2 cut(s) | 381, 1140 |
| Kzo9I | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| LguI | GCTCTTC | 2 cut(s) | 69, 972 |
| LmnI | GCTCC | 4 cut(s) | 41, 685, 768, 987 |
| Lsp1109I | GCAGC | 2 cut(s) | 164, 181 |
| LweI | GCATC | 5 cut(s) | 334, 884, 963, 1066, 1513 |
| MaeI | CTAG | 6 cut(s) | 371, 509, 515, 651, 986, 1448 |
| MalI | GATC | 7 cut(s) | 17, 96, 260, 351, 696, 822, 1353 |
| MboI | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| MflI | RGATCY | 1 cut(s) | 258 |
| MhlI | GDGCHC | 3 cut(s) | 46, 616, 984 |
| MlsI | TGGCCA | 1 cut(s) | 1130 |
| MluNI | TGGCCA | 1 cut(s) | 1130 |
| MlyI | GAGTC | 3 cut(s) | 568, 632, 1224 |
| Mox20I | TGGCCA | 1 cut(s) | 1130 |
| Mph1103I | ATGCAT | 3 cut(s) | 307, 600, 862 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1201 |
| MscI | TGGCCA | 1 cut(s) | 1130 |
| MseI | TTAA | 8 cut(s) | 110, 221, 266, 380, 830, 1139, 1391, 1754 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1330 |
| Msp20I | TGGCCA | 1 cut(s) | 1130 |
| MspI | CCGG | 1 cut(s) | 1669 |
| MspR9I | CCNGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| Mva1269I | GAATGC | 1 cut(s) | 1631 |
| MvaI | CCWGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 242, 979, 1296, 1584 |
| NcoI | CCATGG | 1 cut(s) | 804 |
| NdeII | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| NlaIV | GGNNCC | 2 cut(s) | 118, 260 |
| NmeAIII | GCCGAG | 1 cut(s) | 646 |
| NmuCI | GTSAC | 4 cut(s) | 775, 908, 1041, 1263 |
| NsiI | ATGCAT | 3 cut(s) | 307, 600, 862 |
| NspI | RCATGY | 6 cut(s) | 328, 860, 1146, 1274, 1335, 1456 |
| PciI | ACATGT | 4 cut(s) | 324, 1142, 1270, 1331 |
| PciSI | GCTCTTC | 2 cut(s) | 69, 972 |
| PctI | GAATGC | 1 cut(s) | 1631 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1201 |
| PfeI | GAWTC | 3 cut(s) | 671, 1251, 1528 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1741 |
| PkrI | GCNGC | 3 cut(s) | 154, 196, 953 |
| PleI | GAGTC | 3 cut(s) | 567, 631, 1223 |
| PpsI | GAGTC | 3 cut(s) | 567, 631, 1223 |
| PpuMI | RGGWCCY | 1 cut(s) | 367 |
| PscI | ACATGT | 4 cut(s) | 324, 1142, 1270, 1331 |
| PshBI | ATTAAT | 1 cut(s) | 830 |
| Psp124BI | GAGCTC | 1 cut(s) | 984 |
| Psp5II | RGGWCCY | 1 cut(s) | 367 |
| Psp6I | CCWGG | 5 cut(s) | 236, 446, 1130, 1156, 1740 |
| PspGI | CCWGG | 5 cut(s) | 236, 446, 1130, 1156, 1740 |
| PspN4I | GGNNCC | 2 cut(s) | 118, 260 |
| PspPI | GGNCC | 3 cut(s) | 367, 1181, 1233 |
| PspPPI | RGGWCCY | 1 cut(s) | 367 |
| PsuI | RGATCY | 1 cut(s) | 258 |
| RsaI | GTAC | 2 cut(s) | 12, 1155 |
| RsaNI | GTAC | 2 cut(s) | 11, 1154 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1330 |
| SacI | GAGCTC | 1 cut(s) | 984 |
| SapI | GCTCTTC | 2 cut(s) | 69, 972 |
| SaqAI | TTAA | 8 cut(s) | 110, 221, 266, 380, 830, 1139, 1391, 1754 |
| SatI | GCNGC | 3 cut(s) | 153, 195, 952 |
| Sau3AI | GATC | 7 cut(s) | 15, 94, 258, 349, 694, 820, 1351 |
| Sau96I | GGNCC | 3 cut(s) | 367, 1181, 1233 |
| ScaI | AGTACT | 1 cut(s) | 12 |
| SchI | GAGTC | 3 cut(s) | 568, 632, 1224 |
| ScrFI | CCNGG | 5 cut(s) | 238, 448, 1132, 1158, 1742 |
| SduI | GDGCHC | 3 cut(s) | 46, 616, 984 |
| SfaNI | GCATC | 5 cut(s) | 334, 884, 963, 1066, 1513 |
| SinI | GGWCC | 2 cut(s) | 367, 1181 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1330 |
| SmlI | CTYRAG | 3 cut(s) | 281, 292, 840 |
| SmoI | CTYRAG | 3 cut(s) | 281, 292, 840 |
| SsiI | CCGC | 3 cut(s) | 472, 951, 1299 |
| SspI | AATATT | 2 cut(s) | 1102, 1125 |
| SspMI | CTAG | 6 cut(s) | 371, 509, 515, 651, 986, 1448 |
| SstI | GAGCTC | 1 cut(s) | 984 |
| StyD4I | CCNGG | 5 cut(s) | 236, 446, 1130, 1156, 1740 |
| StyI | CCWWGG | 1 cut(s) | 804 |
| TaaI | ACNGT | 8 cut(s) | 25, 124, 945, 1033, 1263, 1696, 1731, 1752 |
| TaqI | TCGA | 4 cut(s) | 77, 823, 1411, 1483 |
| TatI | WGTACW | 1 cut(s) | 10 |
| TauI | GCSGC | 1 cut(s) | 954 |
| TfiI | GAWTC | 3 cut(s) | 671, 1251, 1528 |
| Tru1I | TTAA | 8 cut(s) | 110, 221, 266, 380, 830, 1139, 1391, 1754 |
| Tru9I | TTAA | 8 cut(s) | 110, 221, 266, 380, 830, 1139, 1391, 1754 |
| TscAI | CASTG | 2 cut(s) | 127, 1350 |
| TseFI | GTSAC | 4 cut(s) | 775, 908, 1041, 1263 |
| TseI | GCWGC | 2 cut(s) | 152, 194 |
| Tsp45I | GTSAC | 4 cut(s) | 775, 908, 1041, 1263 |
| TspDTI | ATGAA | 7 cut(s) | 96, 196, 470, 615, 1055, 1638, 1700 |
| TspGWI | ACGGA | 2 cut(s) | 251, 1292 |
| TspRI | CASTG | 2 cut(s) | 127, 1350 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1741 |
| VpaK11BI | GGWCC | 2 cut(s) | 367, 1181 |
| VspI | ATTAAT | 1 cut(s) | 830 |
| XapI | RAATTY | 4 cut(s) | 128, 542, 963, 1607 |
| XbaI | TCTAGA | 2 cut(s) | 650, 1447 |
| XceI | RCATGY | 6 cut(s) | 328, 860, 1146, 1274, 1335, 1456 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1201 |
| XspI | CTAG | 6 cut(s) | 371, 509, 515, 651, 986, 1448 |
| ZrmI | AGTACT | 1 cut(s) | 12 |
| Zsp2I | ATGCAT | 3 cut(s) | 307, 600, 862 |