FvH4_1g25840

ABC transporter D family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0006235
Physical Location & Seq
Forward (+)
17748564 .. 17765423
16860 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25840.t3

Sequence Viewer

Length: 4029 bp
ATGCCTTCGCTTCAGCTGTTGCAATTAACAGAGCATGGTCGGAGTTTTGTTGCATCAAGGAGGAAAACCTTGCTACTTGCTACTGGTATTGTAGTTGCTGGTGGGGCAGCTGCTTATGTTCAATCAAGATTAACCCATAAAAAGCACAATTCTTTTGGTCAATATAATGGGCTGAATGAAAATAAAGAGGCAGATAATGTCGTGGCGAATGATCTTAAGAAAAAGAAACCTCCACAAAAGAGAGGGGGATTGAAGTCTCTTCAAGTGCTTGCTGCAATTCTTTTATCTGAAATGGGCCAAGTGGGTGTGAGGGATCTTTTATCTTTGGTCGGAATAGTGGTGTTGCGAACTGCATTGAGCAACAGACTTGCGAAAGTCCAAGGGTTTTTATTCCGTGCAGCTTTTCTTCGACGTGTTCCATTATTTTTCCGGCTGATTTCTGAGAATATTTTATTATGTTTCCTTGCCTCGACTATGCATTCAACTTCAAAGTACATAACAGGGACTTTAAGTCTTCGGTTCAGAAAAATATTGACAAAACGTATCCATTCCCATTATTTTGAGAATATTGCATACTACAAAATGTCTCATGTTGATGGTCGGATAACTAATCCAGAACAGCGAATTGCAAGTGATGTACCAAGGTTCTGTTCGGAGTTGAGTGAAATCGTGCAAGATGATTTAACAGCTGTTACTGATGGTCTCCTTTACTCTTGGCGGCTGTGTTCCTATGCCAGTCCCAAATATATATTCTGGATACTGGCATATGTATTGGGAGCAGGGGGAATGATAAGAAACTTCTCTCCTCCTTTTGGGAAATTGATGTCCAAAGAACAACAATTGGAAGGGGAGTACCGGCAGCTCCATTCACGATTAAGAACCCATGCAGAAAGTGTGGCATTCTACGGTGGAGAAAGTAGAGAGGAATCTCATATTCAGAAGAAGTTTAACACACTTGTTGGGCATCTGCGTGTTGTCCTTCATGACCATTGGTGGTTTGGAATGATTCAAGACTTCTTGTTGAAATATCTTGGTGCCACAGTTGCTGTTATATTGATTATCGAGCCCTTTTTCTCGGGCAGTTTGAGGCCTGATACTTCAACTTTAGGCCGCGCAGAGATGTTAAGCAATTTGAGATATCATACGAGTGTCATCATTTCACTTTTCCAGTCTATGGGAACTCTCGCTTCAAGCTCGAGAAAGCTTAATCGTCTCAGTGGTTATGCTGATCGCATACATGAATTAATGGTCATATCAAGGGAGCTAAATGCTGTTGATAACAAATATTCAGGGAATAAAAATTGCTCTAGTGAGGCTGATTACATTGAATTTGCTGGGGTCAAGGTTGTTACCCCCACGGGTAATGTTTTGGTGGATAAATTGTCACTTAGGGTTGAACCAGGATCTAATCTTTTGATTACAGGTCCAAATGGAAGTGGAAAGAGCTCGCTTTTCCGAGTTTTAGGAGGCCTCTGGCCCCTGGTGTCTGGCCATATTGTGAAACCTGGTGTTGGAACTGATCTCAACAAAGAAATTTTTTATGTCCCACAAAGACCCTACACTGCTGTTGGAACACTTCGAGACCAGTTGATTTATCCTCTTACTGCAGATCAAGAGGTCAAACCACTTACACGTGAAGAAATGGCAGAGCTATTGAGAAATGTTGATCTTCAGTATTTATTAGACCGTTATCCACCTGAGGAAGAGATTAATTGGGGTGATGAATTATCTCTTGGTGAGCAACAAAGATTGGGGATGGCTAGACTTTTCTATCATAAGCCTAAATTTGCAATTCTTGATGAATGCACAAGTGCTGTCACAACTGACATGGAGGAAAGATTTTGTGCTAAAGTTCGAGCAATGGGGACATCGTGCATTACTATCTCGCATCGTCCAGCACTAGTTGCATTTCATGATGTAGTGCTGTCCTTGGATGGTGAAGGCGGTTGGAGTGTTCATGAGAAAAGGGATGATTCTCTAGTCCGTAATGAAGGTGGGAATAGTAGGTTGAAGCTTTCTGAAACGAACCGGCAGAATGATGCAATGACTGTTCAGCGAGCATTCGCTTTGACCAAGGATTCCACAATCTCAAACTCAAAGTCCCAGTCATACATAGCTGATGTGGTAGCAGTTTCTCCCTCTGCTGAGCATAATGTTACTATTCCGTCTTTCCCACAGCTCCAAAGAGCTCCCAGAGCACTGCCACTGAGAGCAGCTGCCATGTTCAAAGTACTGATTCCTACCGTTGTTGATAAACAAGGAGCACAACTGCTTGCAGTTGCTTTTCTTGTAGTATCGAGGACATGGATTTCTGATCGTATTGCTTCATTAAATGGAACCACTGTGAAATTTGTTTTGGAACAAGATAAGGCATCCTTTATCCATCTAATTGGTGTTAGTGTACTTCAGAGTGCGGCATCTTCTTTCATTGCACCATCTCTAAGGCACTTAAAATCTAGGCTGGCTCTTGGGTGGAGGATTCGTTTGACTCAACATTTACTTAAAAACTACTTGAGAAATAATGCATTCTATAAGGTATTCAACATGTCAAGCAATAACATAGACGCAGATCAGAGAATTACACAGGACCTTGAAAAGTTAACCTCTGACTTGTCGGGATTAGTTACTGGATTGGTAAAGCCATCTGTGGACATTCTATGGTTCACCTGGAGAATGAAGCTATTGACTGGTCAGAGAGGAGTAACTATATTGTACGCGTATATGTTACTGGGTCTTGGTTTGCTCAGGGCTGCTACCCCTGAATTCGGTGATTTAACAAGTCGACAACAACAACTTGAAGGAACCTTTAGGTTTATGCATGAAAGACTGCGTGCTCATGCTGAATCTGTTGCTTTCTTTGGGGGCGGTTATAGAGAGAAAGCTATGGTTGAATCAAAGTTCACGGAGCTACTCCATCACTCCTCGTCTCTTTTGAAGAAGCAATGGTTATTTGGTATTCTAGATGATTTTATCACGAAACAACTCCCACATAATGTGACTTGGGGATTGAGCTTGCTATATGCCATCGAACACAAGGGAGACCGAGCACTAATATCTACTCAAGGTGAGCTGGCACATGCATTGCGTTTCTTGGCATCTGTGGTATCTCAAAGCTTTTTAGCTTTTGGTGACATTCTTGAATTGCATAGAAAATTTCTGGAACTTTCTGGCAGCATCAACAGGGTTTTTGAGCTTGAAGAGCTTCTAGACGCTGCACAGTCTGTTGTTGGCTATTCTGGGGGTCCTGAAGCTGGTAACTTATCACCATCTGAGAGGGAAGGTGTTCCATCTGAAGATGCCATTAACTTTTCTGAAGTTGATATCATAACCCCATCACAGAAATTGTTGGCTAGGAAATTAACATGTGATATAGTACCTGGGAAAAGCTTGCTTGTTACTGGTCCAAATGGGAGTGGAAAAAGTTCTGTGTTTAGAGTTCTTAGAGGTCTTTGGCCCATCATGAGTGGAAGAATCACACGGCCATCTCAAGATGTTAACGGAGTTAATAGAGGAGTTGGATCTGGTTGCGGAGTGTTTTATGTTCCTCAGCGACCTTACACATGCTTGGGAACACTCAGGGATCAAATTATATATCCTCTCTCTTTTGATGAGGCGGAGATGAGGGCATTAAAGTTGTATCAAGAAGGTGGAGAATTTGCCGACAGCACCACCATTCTGGACATGCGTTTGAGAACTATTCTGGAGAATGTCCGATTAAGTTATCTTTTGGAAAGGGAGGATGGTGGCTGGGATGCTAATCTCAATTGGGAGGACACTCTCTCTCTTGGAGAACAGCAGAGACTAGGCATGGCACGTTTATTTTTTCACAAACCTAAATTTGCCATCCTTGATGAATGCACCAATGCTACAAGTGTTGATGTTGAAGAACAACTTTATCGGCTTGCAAATGACATGGGTATCACAGTTGTTACCTCCTCACAACGTCCTGCTCTAATACCATTCCATTCCCTGGAATTACGGCTTATTGATGGTGAGGGTAACTGGGAGCTCCGATCAATAAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006629 GO:0008150 GO:0008152 GO:0009056 GO:0016042 GO:0044238 GO:0071704 GO:1901575
KEGG Pathways
Metabolic & Signaling
ko02010 ko04146 map02010 map04146
Pfam Domains
Protein Families
ABC_membrane_2 ABC_tran

Protein Analysis

1343

Amino Acids

150.0

Weight (kDa)

9.09

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 90 - 358 1.4e-87 ABC transporter transmembrane region 2
ABC_tran PF00005 459 - 604 6.7e-20 ABC transporter
ABC_membrane_2 PF06472 741 - 1007 1.5e-81 ABC transporter transmembrane region 2
ABC_tran PF00005 1119 - 1270 7.8e-08 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1034
AccB7I CCANNNNNTGG 2 cut(s) 1174, 3970
AccI GTMKAC 1 cut(s) 2782
AccII CGCG 2 cut(s) 1113, 2717
AciI CCGC 7 cut(s) 718, 1111, 1944, 2414, 2865, 3528, 3614
AclWI GGATC 4 cut(s) 321, 1411, 3526, 3588
AcoI YGGCCR 2 cut(s) 1489, 3479
AcsI RAATTY 8 cut(s) 1328, 1533, 1784, 2348, 2762, 3152, 3653, 3836
AcuI CTGAAG 5 cut(s) 1655, 2390, 3267, 3312, 3333
AcvI CACGTG 1 cut(s) 1634
AfaI GTAC 7 cut(s) 494, 639, 854, 2232, 2403, 2714, 3375
AfiI CCNNNNNNNGG 6 cut(s) 812, 1174, 1511, 2765, 3251, 3970
AflII CTTAAG 1 cut(s) 215
AflIII ACRYGT 5 cut(s) 412, 1631, 2544, 2715, 3362
AhdI GACNNNNNGTC 1 cut(s) 510
AhlI ACTAGT 1 cut(s) 1900
AjiI CACGTC 1 cut(s) 413
AjnI CCWGG 6 cut(s) 1399, 1479, 1504, 2666, 3376, 3969
AjuI GAANNNNNNNTTGG 8 cut(s) 634, 666, 734, 766, 1716, 1748, 2339, 2371
Alw21I GWGCWC 7 cut(s) 1448, 2191, 2200, 2266, 2836, 3049, 4011
Alw26I GTCTC 8 cut(s) 261, 591, 707, 1217, 1575, 2931, 3033, 3793
AlwI GGATC 4 cut(s) 321, 1411, 3526, 3588
AlwNI CAGNNNCTG 1 cut(s) 1046
Ama87I CYCGRG 2 cut(s) 1075, 1195
AoxI GGCC 8 cut(s) 295, 1088, 1108, 1468, 1475, 1489, 3452, 3479
ApoI RAATTY 8 cut(s) 1328, 1533, 1784, 2348, 2762, 3152, 3653, 3836
ArsI GACNNNNNNTTYG 4 cut(s) 2084, 2090, 2116, 2122
AseI ATTAAT 2 cut(s) 1244, 1710
Asp700I GAANNNNTTC 3 cut(s) 3201, 3282, 3421
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 7 cut(s) 295, 1424, 1476, 2587, 3242, 3401, 3453
AsuHPI GGTGA 9 cut(s) 1730, 1748, 1949, 2656, 2780, 3077, 3140, 3255, 4004
AvaI CYCGRG 2 cut(s) 1075, 1195
AvaII GGWCC 4 cut(s) 1424, 2587, 3242, 3401
AxyI CCTNAGG 1 cut(s) 1698
BaeI ACNNNNGTAYC 2 cut(s) 3901, 3934
BalI TGGCCA 1 cut(s) 1491
BanI GGYRCC 1 cut(s) 1034
BanII GRGCYC 4 cut(s) 1068, 1448, 2191, 4011
BbrPI CACGTG 1 cut(s) 1634
BbsI GAAGAC 1 cut(s) 506
Bbv12I GWGCWC 7 cut(s) 1448, 2191, 2200, 2266, 2836, 3049, 4011
BbvCI CCTCAGC 1 cut(s) 3546
BceAI ACGGC 2 cut(s) 3494, 3995
BciT130I CCWGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
BciVI GTATCC 2 cut(s) 554, 750
BcoDI GTCTC 8 cut(s) 261, 591, 707, 1217, 1575, 2931, 3033, 3793
BcuI ACTAGT 1 cut(s) 1900
BfaI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2457, 2960, 3206, 3351, 3803
BfmI CTRYAG 1 cut(s) 1605
BfrI CTTAAG 1 cut(s) 215
BfuI GTATCC 2 cut(s) 554, 750
BlpI GCTNAGC 1 cut(s) 2145
BmcAI AGTACT 1 cut(s) 2232
Bme1390I CCNGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
Bme18I GGWCC 4 cut(s) 1424, 2587, 3242, 3401
BmeRI GACNNNNNGTC 1 cut(s) 510
BmeT110I CYCGRG 2 cut(s) 1075, 1195
BmgBI CACGTC 1 cut(s) 413
BmgT120I GGNCC 7 cut(s) 295, 1424, 1476, 2587, 3242, 3401, 3453
BmiI GGNNCC 5 cut(s) 1036, 1478, 2338, 2803, 3243
BmrFI CCNGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
BmrI ACTGGG 3 cut(s) 2098, 2738, 4012
BmuI ACTGGG 3 cut(s) 2098, 2738, 4012
BpiI GAAGAC 1 cut(s) 506
BpmI CTGGAG 2 cut(s) 2689, 3722
Bpu10I CCTNAGC 2 cut(s) 2744, 3546
Bpu1102I GCTNAGC 1 cut(s) 2145
BpuEI CTTGAG 3 cut(s) 2533, 3045, 3471
BsaAI YACGTR 1 cut(s) 1634
BsaBI GATNNNNATC 1 cut(s) 3756
BsaI GGTCTC 3 cut(s) 707, 1575, 3033
BsaJI CCNNGG 8 cut(s) 379, 641, 1356, 1479, 1929, 2073, 3377, 3969
BsaXI ACNNNNNCTCC 2 cut(s) 2467, 2497
Bsc4I CCNNNNNNNGG 6 cut(s) 812, 1174, 1511, 2765, 3251, 3970
Bse118I RCCGGY 2 cut(s) 855, 2028
Bse21I CCTNAGG 1 cut(s) 1698
Bse3DI GCAATG 5 cut(s) 1866, 2049, 2427, 2948, 3080
Bse8I GATNNNNATC 1 cut(s) 3756
BseBI CCWGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
BseDI CCNNGG 8 cut(s) 379, 641, 1356, 1479, 1929, 2073, 3377, 3969
BseGI GGATG 7 cut(s) 1761, 1939, 1975, 2372, 3745, 3757, 3843
BseJI GATNNNNATC 1 cut(s) 3756
BseLI CCNNNNNNNGG 6 cut(s) 812, 1174, 1511, 2765, 3251, 3970
BseMI GCAATG 5 cut(s) 1866, 2049, 2427, 2948, 3080
BseMII CTCAG 9 cut(s) 432, 1228, 1689, 2136, 2198, 2758, 3261, 3560, 3589
BseRI GAGGAG 5 cut(s) 795, 2712, 2911, 3525, 3925
BseYI CCCAGC 2 cut(s) 1334, 3747
BsgI GTGCAG 2 cut(s) 417, 3198
Bsh1236I CGCG 2 cut(s) 1113, 2717
BshFI GGCC 8 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3454, 3481
BshNI GGYRCC 1 cut(s) 1034
BsiHKAI GWGCWC 7 cut(s) 1448, 2191, 2200, 2266, 2836, 3049, 4011
BsiHKCI CYCGRG 2 cut(s) 1075, 1195
BsiSI CCGG 3 cut(s) 430, 856, 2029
BslFI GGGAC 5 cut(s) 517, 723, 1529, 1879, 2086
BslI CCNNNNNNNGG 6 cut(s) 812, 1174, 1511, 2765, 3251, 3970
BsmAI GTCTC 8 cut(s) 261, 591, 707, 1217, 1575, 2931, 3033, 3793
BsmBI CGTCTC 2 cut(s) 1217, 2931
BsmFI GGGAC 5 cut(s) 517, 723, 1529, 1879, 2086
BsmI GAATGC 6 cut(s) 478, 899, 1808, 2060, 2525, 3860
BsnI GGCC 8 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3454, 3481
Bso31I GGTCTC 3 cut(s) 707, 1575, 3033
BsoBI CYCGRG 2 cut(s) 1075, 1195
Bsp1286I GDGCHC 8 cut(s) 1068, 1448, 2191, 2200, 2266, 2836, 3049, 4011
Bsp1720I GCTNAGC 1 cut(s) 2145
BspACI CCGC 7 cut(s) 718, 1111, 1944, 2414, 2865, 3528, 3614
BspANI GGCC 8 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3454, 3481
BspCNI CTCAG 9 cut(s) 433, 1227, 1690, 2137, 2199, 2757, 3262, 3559, 3588
BspFNI CGCG 2 cut(s) 1113, 2717
BspHI TCATGA 4 cut(s) 982, 1912, 1957, 3459
BspLI GGNNCC 5 cut(s) 1036, 1478, 2338, 2803, 3243
BspMAI CTGCAG 1 cut(s) 1609
BspPI GGATC 4 cut(s) 321, 1411, 3526, 3588
BspQI GCTCTTC 1 cut(s) 3192
BspT107I GGYRCC 1 cut(s) 1034
BspTI CTTAAG 1 cut(s) 215
BspTNI GGTCTC 3 cut(s) 707, 1575, 3033
BsrDI GCAATG 5 cut(s) 1866, 2049, 2427, 2948, 3080
BsrFI RCCGGY 2 cut(s) 855, 2028
BssAI RCCGGY 2 cut(s) 855, 2028
BssECI CCNNGG 8 cut(s) 379, 641, 1356, 1479, 1929, 2073, 3377, 3969
BssT1I CCWWGG 4 cut(s) 379, 641, 1929, 2073
Bst2UI CCWGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
Bst4CI ACNGT 8 cut(s) 908, 1042, 1688, 2050, 2245, 2344, 3219, 3925
Bst6I CTCTTC 3 cut(s) 264, 1698, 3192
BstAFI CTTAAG 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 1904
BstBAI YACGTR 1 cut(s) 1634
BstDSI CCRYGG 1 cut(s) 1356
BstF5I GGATG 7 cut(s) 1761, 1939, 1975, 2372, 3745, 3757, 3843
BstFNI CGCG 2 cut(s) 1113, 2717
BstHHI GCGC 1 cut(s) 1115
BstMAI GTCTC 8 cut(s) 261, 591, 707, 1217, 1575, 2931, 3033, 3793
BstMWI GCNNNNNNNGC 5 cut(s) 104, 1043, 1904, 2195, 3199
BstNI CCWGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
BstNSI RCATGY 5 cut(s) 2548, 3080, 3366, 3564, 3685
BstSCI CCNGG 6 cut(s) 1399, 1479, 1504, 2666, 3376, 3969
BstSFI CTRYAG 1 cut(s) 1605
BstUI CGCG 2 cut(s) 1113, 2717
BstV2I GAAGAC 1 cut(s) 506
BstX2I RGATCY 3 cut(s) 313, 1403, 3518
BstXI CCANNNNNNTGG 2 cut(s) 2390, 3676
BstYI RGATCY 3 cut(s) 313, 1403, 3518
Bsu36I CCTNAGG 1 cut(s) 1698
BsuI GTATCC 2 cut(s) 554, 750
BsuRI GGCC 8 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3454, 3481
BtgI CCRYGG 1 cut(s) 1356
BtrI CACGTC 1 cut(s) 413
BtsCI GGATG 7 cut(s) 1761, 1939, 1975, 2372, 3745, 3757, 3843
BtsI GCAGTG 2 cut(s) 1560, 2198
BtsIMutI CAGTG 5 cut(s) 1222, 1560, 2198, 2204, 2340
CaiI CAGNNNCTG 1 cut(s) 1046
CciI TCATGA 4 cut(s) 982, 1912, 1957, 3459
CfoI GCGC 1 cut(s) 1115
Cfr10I RCCGGY 2 cut(s) 855, 2028
Cfr13I GGNCC 7 cut(s) 295, 1424, 1476, 2587, 3242, 3401, 3453
CseI GACGC 2 cut(s) 2573, 3218
CsiI ACCWGGT 1 cut(s) 1504
Csp6I GTAC 7 cut(s) 493, 638, 853, 2231, 2402, 2713, 3374
CviQI GTAC 7 cut(s) 493, 638, 853, 2231, 2402, 2713, 3374
DriI GACNNNNNGTC 1 cut(s) 510
EaeI YGGCCR 2 cut(s) 1489, 3479
Eam1104I CTCTTC 3 cut(s) 264, 1698, 3192
Eam1105I GACNNNNNGTC 1 cut(s) 510
EarI CTCTTC 3 cut(s) 264, 1698, 3192
EciI GGCGGA 1 cut(s) 3629
Ecl136II GAGCTC 3 cut(s) 1446, 2189, 4009
Eco130I CCWWGG 4 cut(s) 379, 641, 1929, 2073
Eco147I AGGCCT 2 cut(s) 1090, 1470
Eco24I GRGCYC 4 cut(s) 1068, 1448, 2191, 4011
Eco31I GGTCTC 3 cut(s) 707, 1575, 3033
Eco32I GATATC 2 cut(s) 1139, 3322
Eco47I GGWCC 4 cut(s) 1424, 2587, 3242, 3401
Eco53kI GAGCTC 3 cut(s) 1446, 2189, 4009
Eco57I CTGAAG 5 cut(s) 1655, 2390, 3267, 3312, 3333
Eco72I CACGTG 1 cut(s) 1634
Eco81I CCTNAGG 1 cut(s) 1698
Eco88I CYCGRG 2 cut(s) 1075, 1195
EcoICRI GAGCTC 3 cut(s) 1446, 2189, 4009
EcoO109I RGGNCCY 2 cut(s) 2587, 3242
EcoRI GAATTC 1 cut(s) 2762
EcoRII CCWGG 6 cut(s) 1399, 1479, 1504, 2666, 3376, 3969
EcoRV GATATC 2 cut(s) 1139, 3322
EcoT14I CCWWGG 4 cut(s) 379, 641, 1929, 2073
EcoT22I ATGCAT 4 cut(s) 480, 2527, 2820, 3082
EcoT38I GRGCYC 4 cut(s) 1068, 1448, 2191, 4011
ErhI CCWWGG 4 cut(s) 379, 641, 1929, 2073
Esp3I CGTCTC 2 cut(s) 1217, 2931
FalI AAGNNNNNCTT 4 cut(s) 2360, 2392, 3876, 3908
FaqI GGGAC 5 cut(s) 517, 723, 1529, 1879, 2086
FauNDI CATATG 1 cut(s) 766
FblI GTMKAC 1 cut(s) 2782
FokI GGATG 7 cut(s) 1768, 1946, 1982, 2359, 3752, 3764, 3830
FriOI GRGCYC 4 cut(s) 1068, 1448, 2191, 4011
FspBI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2457, 2960, 3206, 3351, 3803
GlaI GCGC 1 cut(s) 1114
GsaI CCCAGC 2 cut(s) 1338, 3751
GsuI CTGGAG 2 cut(s) 2689, 3722
HaeIII GGCC 8 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3454, 3481
HapII CCGG 3 cut(s) 430, 856, 2029
HgaI GACGC 2 cut(s) 2573, 3218
HhaI GCGC 1 cut(s) 1115
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 3 cut(s) 2601, 2783, 3496
HindII GTYRAC 3 cut(s) 2601, 2783, 3496
HindIII AAGCTT 4 cut(s) 1202, 2012, 3112, 3385
HpaI GTTAAC 2 cut(s) 2601, 3496
HpaII CCGG 3 cut(s) 430, 856, 2029
HphI GGTGA 9 cut(s) 1730, 1748, 1949, 2656, 2780, 3077, 3140, 3255, 4004
Hpy166II GTNNAC 7 cut(s) 2402, 2601, 2650, 2664, 2783, 2901, 3496
Hpy8I GTNNAC 7 cut(s) 2402, 2601, 2650, 2664, 2783, 2901, 3496
Hpy99I CGWCG 1 cut(s) 414
HpyAV CCTTC 8 cut(s) 15, 839, 989, 1934, 1985, 2792, 3272, 3638
HpyCH4III ACNGT 8 cut(s) 908, 1042, 1688, 2050, 2245, 2344, 3219, 3925
HpyCH4IV ACGT 5 cut(s) 412, 541, 1633, 3814, 3943
HpyF10VI GCNNNNNNNGC 5 cut(s) 104, 1043, 1904, 2195, 3199
HpySE526I ACGT 5 cut(s) 412, 541, 1633, 3814, 3943
HspAI GCGC 1 cut(s) 1113
KspAI GTTAAC 2 cut(s) 2601, 3496
LguI GCTCTTC 1 cut(s) 3192
LmnI GCTCC 9 cut(s) 776, 867, 1261, 2184, 2194, 2261, 2905, 4006, 4014
MabI ACCWGGT 1 cut(s) 1504
MaeI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2457, 2960, 3206, 3351, 3803
MaeII ACGT 5 cut(s) 412, 541, 1633, 3814, 3943
MfeI CAATTG 2 cut(s) 839, 3763
MflI RGATCY 3 cut(s) 313, 1403, 3518
MhlI GDGCHC 8 cut(s) 1068, 1448, 2191, 2200, 2266, 2836, 3049, 4011
MlsI TGGCCA 1 cut(s) 1491
MluI ACGCGT 1 cut(s) 2715
MluNI TGGCCA 1 cut(s) 1491
MlyI GAGTC 1 cut(s) 2482
MmeI TCCRAC 7 cut(s) 20, 310, 581, 1492, 1549, 1928, 3496
Mox20I TGGCCA 1 cut(s) 1491
Mph1103I ATGCAT 4 cut(s) 480, 2527, 2820, 3082
MroXI GAANNNNTTC 3 cut(s) 3201, 3282, 3421
MscI TGGCCA 1 cut(s) 1491
MslI CAYNNNNRTG 3 cut(s) 594, 969, 1146
Msp20I TGGCCA 1 cut(s) 1491
MspA1I CMGCKG 4 cut(s) 16, 110, 689, 2216
MspCI CTTAAG 1 cut(s) 215
MspI CCGG 3 cut(s) 430, 856, 2029
MspR9I CCNGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
MunI CAATTG 2 cut(s) 839, 3763
Mva1269I GAATGC 6 cut(s) 478, 899, 1808, 2060, 2525, 3860
MvaI CCWGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
MvnI CGCG 2 cut(s) 1113, 2717
MwoI GCNNNNNNNGC 5 cut(s) 104, 1043, 1904, 2195, 3199
NdeI CATATG 1 cut(s) 766
NlaIV GGNNCC 5 cut(s) 1036, 1478, 2338, 2803, 3243
NmuCI GTSAC 4 cut(s) 1383, 1816, 2995, 3128
NsiI ATGCAT 4 cut(s) 480, 2527, 2820, 3082
NspI RCATGY 5 cut(s) 2548, 3080, 3366, 3564, 3685
PaeR7I CTCGAG 1 cut(s) 1195
PagI TCATGA 4 cut(s) 982, 1912, 1957, 3459
PceI AGGCCT 2 cut(s) 1090, 1470
PciI ACATGT 2 cut(s) 2544, 3362
PciSI GCTCTTC 1 cut(s) 3192
PctI GAATGC 6 cut(s) 478, 899, 1808, 2060, 2525, 3860
PdmI GAANNNNTTC 3 cut(s) 3201, 3282, 3421
PfeI GAWTC 9 cut(s) 926, 1006, 1973, 2078, 2236, 2479, 2843, 2891, 3471
PflMI CCANNNNNTGG 2 cut(s) 1174, 3970
PleI GAGTC 1 cut(s) 2482
PmaCI CACGTG 1 cut(s) 1634
PmlI CACGTG 1 cut(s) 1634
PpsI GAGTC 1 cut(s) 2482
Ppu21I YACGTR 1 cut(s) 1634
PpuMI RGGWCCY 2 cut(s) 2587, 3242
PscI ACATGT 2 cut(s) 2544, 3362
PshBI ATTAAT 2 cut(s) 1244, 1710
Psp124BI GAGCTC 3 cut(s) 1448, 2191, 4011
Psp5II RGGWCCY 2 cut(s) 2587, 3242
Psp6I CCWGG 6 cut(s) 1399, 1479, 1504, 2666, 3376, 3969
PspCI CACGTG 1 cut(s) 1634
PspFI CCCAGC 2 cut(s) 1334, 3747
PspGI CCWGG 6 cut(s) 1399, 1479, 1504, 2666, 3376, 3969
PspN4I GGNNCC 5 cut(s) 1036, 1478, 2338, 2803, 3243
PspPI GGNCC 7 cut(s) 295, 1424, 1476, 2587, 3242, 3401, 3453
PspPPI RGGWCCY 2 cut(s) 2587, 3242
PstI CTGCAG 1 cut(s) 1609
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 3 cut(s) 313, 1403, 3518
PvuII CAGCTG 4 cut(s) 16, 110, 689, 2216
RsaI GTAC 7 cut(s) 494, 639, 854, 2232, 2403, 2714, 3375
RsaNI GTAC 7 cut(s) 493, 638, 853, 2231, 2402, 2713, 3374
RseI CAYNNNNRTG 3 cut(s) 594, 969, 1146
SacI GAGCTC 3 cut(s) 1448, 2191, 4011
SalI GTCGAC 1 cut(s) 2781
SapI GCTCTTC 1 cut(s) 3192
Sau96I GGNCC 7 cut(s) 295, 1424, 1476, 2587, 3242, 3401, 3453
ScaI AGTACT 1 cut(s) 2232
SchI GAGTC 1 cut(s) 2482
ScrFI CCNGG 6 cut(s) 1401, 1481, 1506, 2668, 3378, 3971
SduI GDGCHC 8 cut(s) 1068, 1448, 2191, 2200, 2266, 2836, 3049, 4011
SexAI ACCWGGT 1 cut(s) 1504
SfcI CTRYAG 1 cut(s) 1605
Sfr274I CTCGAG 1 cut(s) 1195
SinI GGWCC 4 cut(s) 1424, 2587, 3242, 3401
SlaI CTCGAG 1 cut(s) 1195
SmiMI CAYNNNNRTG 3 cut(s) 594, 969, 1146
SmlI CTYRAG 5 cut(s) 215, 1195, 2512, 3060, 3486
SmoI CTYRAG 5 cut(s) 215, 1195, 2512, 3060, 3486
SpeI ACTAGT 1 cut(s) 1900
SseBI AGGCCT 2 cut(s) 1090, 1470
SsiI CCGC 7 cut(s) 718, 1111, 1944, 2414, 2865, 3528, 3614
SspI AATATT 4 cut(s) 448, 531, 568, 1286
SspMI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2457, 2960, 3206, 3351, 3803
SstI GAGCTC 3 cut(s) 1448, 2191, 4011
StuI AGGCCT 2 cut(s) 1090, 1470
StyD4I CCNGG 6 cut(s) 1399, 1479, 1504, 2666, 3376, 3969
StyI CCWWGG 4 cut(s) 379, 641, 1929, 2073
TaaI ACNGT 8 cut(s) 908, 1042, 1688, 2050, 2245, 2344, 3219, 3925
TaiI ACGT 5 cut(s) 415, 544, 1636, 3817, 3946
TaqI TCGA 9 cut(s) 409, 470, 1062, 1196, 1579, 1855, 2297, 2782, 3027
TaqII GACCGA 1 cut(s) 3057
TatI WGTACW 3 cut(s) 492, 2230, 2401
TauI GCSGC 3 cut(s) 721, 1113, 2417
TfiI GAWTC 9 cut(s) 926, 1006, 1973, 2078, 2236, 2479, 2843, 2891, 3471
TscAI CASTG 5 cut(s) 1222, 1567, 2205, 2211, 2347
TseFI GTSAC 4 cut(s) 1383, 1816, 2995, 3128
Tsp45I GTSAC 4 cut(s) 1383, 1816, 2995, 3128
TspGWI ACGGA 5 cut(s) 383, 1973, 2154, 2918, 3513
TspRI CASTG 5 cut(s) 1222, 1567, 2205, 2211, 2347
Van91I CCANNNNNTGG 2 cut(s) 1174, 3970
Vha464I CTTAAG 1 cut(s) 215
VpaK11BI GGWCC 4 cut(s) 1424, 2587, 3242, 3401
VspI ATTAAT 2 cut(s) 1244, 1710
XapI RAATTY 8 cut(s) 1328, 1533, 1784, 2348, 2762, 3152, 3653, 3836
XbaI TCTAGA 2 cut(s) 2959, 3205
XceI RCATGY 5 cut(s) 2548, 3080, 3366, 3564, 3685
XcmI CCANNNNNNNNNTGG 1 cut(s) 995
XhoI CTCGAG 1 cut(s) 1195
XmiI GTMKAC 1 cut(s) 2782
XmnI GAANNNNTTC 3 cut(s) 3201, 3282, 3421
XspI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2457, 2960, 3206, 3351, 3803
ZrmI AGTACT 1 cut(s) 2232
Zsp2I ATGCAT 4 cut(s) 480, 2527, 2820, 3082
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.