pycom02g21600

ABC transporter D family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
19857392 .. 19863321
5930 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g21600.4

Sequence Viewer

Length: 1467 bp
ATGCCGTCGCTTCAGCTGCTGCAATTGACTGAGCATGGCCGCAATTTCATGGCGTCGAGGAGGAAAACTTTACTACTTGCCACTGGTATCGTAGTTGCTGGTGGAACGGCTGCATATGTTCAATCGCGATTAAACCATAACAAGCATGGTTTTCATGGTCAATACAATGGGCTTGATGATAGTGAAGAGACAACGGAGAGGGCCATGTTGAGTGATCACAAGTTAAAGAAACCTCCACGTAAGAAAGGGGGATTGAAGTCGCTTCAAGTCCTTGCTGCAATTCTCTTATCCGATATGGGTCAAATGGGTGTGAGGGATCTTTTATCTTTACTCTCCATAGTGGTGTTGCGAACTGCTTTGAGCAACAGACTAGCAAAAGTCCAAGGATTTCTATTCCGTGCAGCTTTCCTTCGACGCATGCCATTATTTTTCCGGTTGATTTCTGAAAATATTTTATTATGTTTCCTTGTATCAACGATGCATTCTACTTCAAAGTACATCACCGGAACCTTAAGTCTGCGATTCAGAAAAATATTGACAAACCTTATCCATTCCCATTATTTTGAGAATATCACATACTACAAAATGTCTCATGTCGATGGTCGAATAACAAATCCTGAACAGCGAATTGCAAGTGATGTGCCAAAGTTCTGTTCAGAGTTGAGTGAAATCGTGCAGGATGATTTGACAGCTGTTACTGATGGTGTACTTTATACTTGGCGGTTGTGCTCTTATGCCAGTCCTAAATATGTATTCTGGATATTGGCATATGTATTAGGGGCAGGGGCCATGATAAGAAATTTTTCTCCTGCTTTTGGGAAACTAATGTCCAAAGAACAACAATTGGAAGGGGAGTACCGGCAGCTTCATTCTCGATTAAGGACCCATGCAGAAAGCGTGGCATTTTATGGTGGGGAGAATAGAGAAGAATCTCATATTAAGAAGAAGTTTGAGACACTGATTAGGCATATGCGTGTTGTCCTTCATGACCATTGGTGGTTTGGCATGATTCAAGACTTTCTATTGAAGTATCTTGGTGCTACAGTTGCTGTTATACTGATTATTGAGCCTTTCTTTTCGGGACATCTGAGGCCTGACACTTCAACTTTAGGTCGCGCAGAGATGTTAAGCAATTTAAGATACCATACTAGTGTCATAATTTCACTATTTCAGTCTCTGGGAACTCTTTCGATAAGTTCAAGGAAGCTAAATCGGCTCAGTGGTTACGCCGATCGCATTCATGAATTATTGGCCATATCAAAAGAGCTCAGTGTGGCTAATAGTAAATCTTCCGGGACCAGAAATTGCTTTAGTGAAGCTGATTACATTGAATTTTCTGGTGTCAAGGTTGTTACACCCACGGGTAATGTTTTGGTGGATAATTTGTCACTTAGGGTCGAATCAGGATCTAATCTTTTGATTACAGGTCCAAACGGTAGTGGGAAGAGCTCACTTTCCGAGTTCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

489

Amino Acids

54.87

Weight (kDa)

9.65

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 127, 1116
AciI CCGC 2 cut(s) 40, 721
AclWI GGATC 2 cut(s) 324, 1414
AcoI YGGCCR 2 cut(s) 37, 1251
AcsI RAATTY 2 cut(s) 799, 1331
AcyI GRCGYC 1 cut(s) 53
AfaI GTAC 3 cut(s) 497, 708, 857
AfiI CCNNNNNNNGG 1 cut(s) 815
AflII CTTAAG 1 cut(s) 511
AgsI TTSAA 9 cut(s) 122, 256, 266, 492, 1013, 1027, 1104, 1200, 1331
AhlI ACTAGT 1 cut(s) 1148
AjuI GAANNNNNNNTTGG 2 cut(s) 637, 669
AluBI AGCT 8 cut(s) 16, 404, 692, 865, 1207, 1267, 1319, 1449
AluI AGCT 8 cut(s) 16, 404, 692, 865, 1207, 1267, 1319, 1449
Alw21I GWGCWC 3 cut(s) 731, 1269, 1451
Alw26I GTCTC 4 cut(s) 182, 594, 947, 1179
AlwI GGATC 2 cut(s) 324, 1414
AlwNI CAGNNNCTG 3 cut(s) 19, 1049, 1177
AoxI GGCC 5 cut(s) 37, 201, 786, 1091, 1251
ApeKI GCWGC 6 cut(s) 16, 19, 110, 275, 401, 862
ApoI RAATTY 2 cut(s) 799, 1331
Asp700I GAANNNNTTC 2 cut(s) 802, 1186
AspLEI GCGC 1 cut(s) 1118
AspS9I GGNCC 5 cut(s) 201, 786, 882, 1296, 1427
AsuC2I CCSGG 1 cut(s) 1294
AsuHPI GGTGA 1 cut(s) 493
AvaII GGWCC 3 cut(s) 882, 1296, 1427
BalI TGGCCA 1 cut(s) 1253
BanII GRGCYC 2 cut(s) 1269, 1451
Bbv12I GWGCWC 3 cut(s) 731, 1269, 1451
BbvI GCAGC 6 cut(s) 3, 6, 97, 262, 413, 874
BccI CCATC 2 cut(s) 593, 695
BceAI ACGGC 1 cut(s) 123
BclI TGATCA 1 cut(s) 214
BcnI CCSGG 1 cut(s) 1294
BcoDI GTCTC 4 cut(s) 182, 594, 947, 1179
BcuI ACTAGT 1 cut(s) 1148
BfaI CTAG 3 cut(s) 371, 1149, 1465
BfmI CTRYAG 1 cut(s) 1041
BfrI CTTAAG 1 cut(s) 511
BisI GCNGC 7 cut(s) 17, 20, 40, 111, 276, 402, 863
BlsI GCNGC 7 cut(s) 18, 21, 41, 112, 277, 403, 864
Bme1390I CCNGG 1 cut(s) 1294
Bme18I GGWCC 3 cut(s) 882, 1296, 1427
BmgT120I GGNCC 5 cut(s) 201, 786, 882, 1296, 1427
BmiI GGNNCC 4 cut(s) 508, 787, 884, 1297
BmrFI CCNGG 1 cut(s) 1294
BmsI GCATC 1 cut(s) 468
BpuMI CCSGG 1 cut(s) 1294
BsaAI YACGTR 1 cut(s) 239
BsaHI GRCGYC 1 cut(s) 53
BsaJI CCNNGG 2 cut(s) 382, 1359
BsaWI WCCGGW 2 cut(s) 432, 503
Bsc4I CCNNNNNNNGG 1 cut(s) 815
Bse118I RCCGGY 1 cut(s) 858
Bse1I ACTGG 2 cut(s) 88, 738
BseDI CCNNGG 2 cut(s) 382, 1359
BseGI GGATG 1 cut(s) 685
BseLI CCNNNNNNNGG 1 cut(s) 815
BseMII CTCAG 4 cut(s) 21, 1079, 1231, 1282
BseNI ACTGG 2 cut(s) 88, 738
BseRI GAGGAG 1 cut(s) 73
BseXI GCAGC 6 cut(s) 3, 6, 97, 262, 413, 874
BsgI GTGCAG 2 cut(s) 420, 695
Bsh1236I CGCG 2 cut(s) 127, 1116
Bsh1285I CGRYCG 1 cut(s) 1234
BshFI GGCC 5 cut(s) 39, 203, 788, 1093, 1253
BsiEI CGRYCG 1 cut(s) 1234
BsiHKAI GWGCWC 3 cut(s) 731, 1269, 1451
BsiSI CCGG 4 cut(s) 433, 504, 859, 1293
BslFI GGGAC 2 cut(s) 1095, 1309
BslI CCNNNNNNNGG 1 cut(s) 815
BsmAI GTCTC 4 cut(s) 182, 594, 947, 1179
BsmFI GGGAC 2 cut(s) 1095, 1309
BsmI GAATGC 2 cut(s) 481, 1236
BsnI GGCC 5 cut(s) 39, 203, 788, 1093, 1253
Bsp1286I GDGCHC 3 cut(s) 731, 1269, 1451
Bsp143I GATC 4 cut(s) 214, 316, 1231, 1406
Bsp68I TCGCGA 1 cut(s) 127
BspACI CCGC 2 cut(s) 40, 721
BspANI GGCC 5 cut(s) 39, 203, 788, 1093, 1253
BspCNI CTCAG 4 cut(s) 22, 1080, 1230, 1281
BspFNI CGCG 2 cut(s) 127, 1116
BspHI TCATGA 2 cut(s) 985, 1240
BspLI GGNNCC 4 cut(s) 508, 787, 884, 1297
BspPI GGATC 2 cut(s) 324, 1414
BspQI GCTCTTC 1 cut(s) 1439
BspTI CTTAAG 1 cut(s) 511
BsrFI RCCGGY 1 cut(s) 858
BsrI ACTGG 2 cut(s) 88, 738
BssAI RCCGGY 1 cut(s) 858
BssECI CCNNGG 2 cut(s) 382, 1359
BssMI GATC 4 cut(s) 214, 316, 1231, 1406
BssNI GRCGYC 1 cut(s) 53
BssT1I CCWWGG 1 cut(s) 382
Bst4CI ACNGT 2 cut(s) 1045, 1436
Bst6I CTCTTC 2 cut(s) 180, 1439
BstACI GRCGYC 1 cut(s) 53
BstAFI CTTAAG 1 cut(s) 511
BstBAI YACGTR 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 419
BstDEI CTNAG 5 cut(s) 30, 1088, 1217, 1268, 1391
BstDSI CCRYGG 1 cut(s) 1359
BstF5I GGATG 1 cut(s) 685
BstFNI CGCG 2 cut(s) 127, 1116
BstHHI GCGC 1 cut(s) 1118
BstKTI GATC 4 cut(s) 217, 319, 1234, 1409
BstMAI GTCTC 4 cut(s) 182, 594, 947, 1179
BstMBI GATC 4 cut(s) 214, 316, 1231, 1406
BstMCI CGRYCG 1 cut(s) 1234
BstMWI GCNNNNNNNGC 3 cut(s) 16, 1046, 1213
BstNSI RCATGY 1 cut(s) 421
BstSCI CCNGG 1 cut(s) 1292
BstSFI CTRYAG 1 cut(s) 1041
BstUI CGCG 2 cut(s) 127, 1116
BstV1I GCAGC 6 cut(s) 3, 6, 97, 262, 413, 874
BstX2I RGATCY 2 cut(s) 316, 1406
BstYI RGATCY 2 cut(s) 316, 1406
BsuRI GGCC 5 cut(s) 39, 203, 788, 1093, 1253
BtgI CCRYGG 1 cut(s) 1359
BtsCI GGATG 1 cut(s) 685
BtsIMutI CAGTG 4 cut(s) 81, 956, 1225, 1276
BtuMI TCGCGA 1 cut(s) 127
Cac8I GCNNGC 1 cut(s) 419
CaiI CAGNNNCTG 3 cut(s) 19, 1049, 1177
CciI TCATGA 2 cut(s) 985, 1240
CfoI GCGC 1 cut(s) 1118
Cfr10I RCCGGY 1 cut(s) 858
Cfr13I GGNCC 5 cut(s) 201, 786, 882, 1296, 1427
CseI GACGC 2 cut(s) 42, 423
Csp6I GTAC 3 cut(s) 496, 707, 856
CviQI GTAC 3 cut(s) 496, 707, 856
DdeI CTNAG 5 cut(s) 30, 1088, 1217, 1268, 1391
DpnI GATC 4 cut(s) 216, 318, 1233, 1408
DpnII GATC 4 cut(s) 214, 316, 1231, 1406
EaeI YGGCCR 2 cut(s) 37, 1251
Eam1104I CTCTTC 2 cut(s) 180, 1439
EarI CTCTTC 2 cut(s) 180, 1439
Ecl136II GAGCTC 2 cut(s) 1267, 1449
Eco130I CCWWGG 1 cut(s) 382
Eco147I AGGCCT 1 cut(s) 1093
Eco24I GRGCYC 2 cut(s) 1269, 1451
Eco47I GGWCC 3 cut(s) 882, 1296, 1427
Eco53kI GAGCTC 2 cut(s) 1267, 1449
EcoICRI GAGCTC 2 cut(s) 1267, 1449
EcoO109I RGGNCCY 1 cut(s) 882
EcoT14I CCWWGG 1 cut(s) 382
EcoT22I ATGCAT 1 cut(s) 483
EcoT38I GRGCYC 2 cut(s) 1269, 1451
ErhI CCWWGG 1 cut(s) 382
FaqI GGGAC 2 cut(s) 1095, 1309
FauNDI CATATG 3 cut(s) 115, 769, 969
FbaI TGATCA 1 cut(s) 214
Fnu4HI GCNGC 7 cut(s) 17, 20, 40, 111, 276, 402, 863
FokI GGATG 1 cut(s) 692
FriOI GRGCYC 2 cut(s) 1269, 1451
Fsp4HI GCNGC 7 cut(s) 17, 20, 40, 111, 276, 402, 863
FspBI CTAG 3 cut(s) 371, 1149, 1465
GlaI GCGC 1 cut(s) 1117
GluI GCNGC 7 cut(s) 17, 20, 40, 111, 276, 402, 863
HaeIII GGCC 5 cut(s) 39, 203, 788, 1093, 1253
HapII CCGG 4 cut(s) 433, 504, 859, 1293
HgaI GACGC 2 cut(s) 42, 423
HhaI GCGC 1 cut(s) 1118
Hin1I GRCGYC 1 cut(s) 53
Hin6I GCGC 1 cut(s) 1116
HinP1I GCGC 1 cut(s) 1116
HinfI GANTC 4 cut(s) 522, 929, 1009, 1400
HpaII CCGG 4 cut(s) 433, 504, 859, 1293
HphI GGTGA 1 cut(s) 493
Hpy166II GTNNAC 1 cut(s) 707
Hpy188I TCNGA 6 cut(s) 292, 445, 527, 658, 1089, 1459
Hpy188III TCNNGA 9 cut(s) 126, 617, 757, 873, 986, 1013, 1080, 1241, 1404
Hpy8I GTNNAC 1 cut(s) 707
Hpy99I CGWCG 3 cut(s) 10, 58, 417
HpyAV CCTTC 3 cut(s) 419, 842, 992
HpyCH4III ACNGT 2 cut(s) 1045, 1436
HpyCH4IV ACGT 1 cut(s) 238
HpyCH4V TGCA 8 cut(s) 22, 113, 278, 401, 481, 632, 676, 890
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 1046, 1213
HpyF3I CTNAG 5 cut(s) 30, 1088, 1217, 1268, 1391
HpySE526I ACGT 1 cut(s) 238
Hsp92I GRCGYC 1 cut(s) 53
HspAI GCGC 1 cut(s) 1116
Ksp22I TGATCA 1 cut(s) 214
Kzo9I GATC 4 cut(s) 214, 316, 1231, 1406
LguI GCTCTTC 1 cut(s) 1439
Lsp1109I GCAGC 6 cut(s) 3, 6, 97, 262, 413, 874
LweI GCATC 1 cut(s) 468
MaeI CTAG 3 cut(s) 371, 1149, 1465
MaeII ACGT 1 cut(s) 238
MaeIII GTNAC 4 cut(s) 694, 1223, 1351, 1386
MalI GATC 4 cut(s) 216, 318, 1233, 1408
MboI GATC 4 cut(s) 214, 316, 1231, 1406
MboII GAAGA 5 cut(s) 197, 938, 955, 1281, 1456
MfeI CAATTG 2 cut(s) 23, 842
MflI RGATCY 2 cut(s) 316, 1406
MhlI GDGCHC 3 cut(s) 731, 1269, 1451
MlsI TGGCCA 1 cut(s) 1253
MluNI TGGCCA 1 cut(s) 1253
MnlI CCTC 6 cut(s) 51, 54, 192, 243, 306, 1083
Mox20I TGGCCA 1 cut(s) 1253
Mph1103I ATGCAT 1 cut(s) 483
MroXI GAANNNNTTC 2 cut(s) 802, 1186
MscI TGGCCA 1 cut(s) 1253
MseI TTAA 7 cut(s) 131, 224, 512, 878, 939, 1127, 1136
MslI CAYNNNNRTG 4 cut(s) 341, 597, 972, 1149
Msp20I TGGCCA 1 cut(s) 1253
MspA1I CMGCKG 2 cut(s) 16, 692
MspCI CTTAAG 1 cut(s) 511
MspI CCGG 4 cut(s) 433, 504, 859, 1293
MspR9I CCNGG 1 cut(s) 1294
MunI CAATTG 2 cut(s) 23, 842
Mva1269I GAATGC 2 cut(s) 481, 1236
MvnI CGCG 2 cut(s) 127, 1116
MwoI GCNNNNNNNGC 3 cut(s) 16, 1046, 1213
NciI CCSGG 1 cut(s) 1294
NdeI CATATG 3 cut(s) 115, 769, 969
NdeII GATC 4 cut(s) 214, 316, 1231, 1406
NlaIV GGNNCC 4 cut(s) 508, 787, 884, 1297
NmuCI GTSAC 1 cut(s) 1386
NruI TCGCGA 1 cut(s) 127
NsiI ATGCAT 1 cut(s) 483
NspI RCATGY 1 cut(s) 421
PaeI GCATGC 1 cut(s) 421
PagI TCATGA 2 cut(s) 985, 1240
PceI AGGCCT 1 cut(s) 1093
PciSI GCTCTTC 1 cut(s) 1439
PctI GAATGC 2 cut(s) 481, 1236
PdmI GAANNNNTTC 2 cut(s) 802, 1186
PfeI GAWTC 4 cut(s) 522, 929, 1009, 1400
PfoI TCCNGGA 1 cut(s) 1292
PkrI GCNGC 7 cut(s) 18, 21, 41, 112, 277, 403, 864
Ple19I CGATCG 1 cut(s) 1234
Ppu21I YACGTR 1 cut(s) 239
PpuMI RGGWCCY 1 cut(s) 882
Psp124BI GAGCTC 2 cut(s) 1269, 1451
Psp5II RGGWCCY 1 cut(s) 882
PspN4I GGNNCC 4 cut(s) 508, 787, 884, 1297
PspPI GGNCC 5 cut(s) 201, 786, 882, 1296, 1427
PspPPI RGGWCCY 1 cut(s) 882
PstNI CAGNNNCTG 3 cut(s) 19, 1049, 1177
PsuI RGATCY 2 cut(s) 316, 1406
PvuI CGATCG 1 cut(s) 1234
PvuII CAGCTG 2 cut(s) 16, 692
RruI TCGCGA 1 cut(s) 127
RsaI GTAC 3 cut(s) 497, 708, 857
RsaNI GTAC 3 cut(s) 496, 707, 856
RseI CAYNNNNRTG 4 cut(s) 341, 597, 972, 1149
SacI GAGCTC 2 cut(s) 1269, 1451
SapI GCTCTTC 1 cut(s) 1439
SaqAI TTAA 7 cut(s) 131, 224, 512, 878, 939, 1127, 1136
SatI GCNGC 7 cut(s) 17, 20, 40, 111, 276, 402, 863
Sau3AI GATC 4 cut(s) 214, 316, 1231, 1406
Sau96I GGNCC 5 cut(s) 201, 786, 882, 1296, 1427
ScrFI CCNGG 1 cut(s) 1294
SduI GDGCHC 3 cut(s) 731, 1269, 1451
SfaNI GCATC 1 cut(s) 468
SfcI CTRYAG 1 cut(s) 1041
SinI GGWCC 3 cut(s) 882, 1296, 1427
SmiMI CAYNNNNRTG 4 cut(s) 341, 597, 972, 1149
SmlI CTYRAG 1 cut(s) 511
SmoI CTYRAG 1 cut(s) 511
SpeI ACTAGT 1 cut(s) 1148
SphI GCATGC 1 cut(s) 421
SseBI AGGCCT 1 cut(s) 1093
SsiI CCGC 2 cut(s) 40, 721
SspI AATATT 2 cut(s) 451, 534
SspMI CTAG 3 cut(s) 371, 1149, 1465
SstI GAGCTC 2 cut(s) 1269, 1451
StuI AGGCCT 1 cut(s) 1093
StyD4I CCNGG 1 cut(s) 1292
StyI CCWWGG 1 cut(s) 382
TaaI ACNGT 2 cut(s) 1045, 1436
TaiI ACGT 1 cut(s) 241
TaqI TCGA 7 cut(s) 56, 412, 597, 604, 874, 1190, 1398
TatI WGTACW 2 cut(s) 495, 706
TauI GCSGC 1 cut(s) 42
TfiI GAWTC 4 cut(s) 522, 929, 1009, 1400
Tru1I TTAA 7 cut(s) 131, 224, 512, 878, 939, 1127, 1136
Tru9I TTAA 7 cut(s) 131, 224, 512, 878, 939, 1127, 1136
TscAI CASTG 4 cut(s) 88, 963, 1225, 1276
TseFI GTSAC 1 cut(s) 1386
TseI GCWGC 6 cut(s) 16, 19, 110, 275, 401, 862
Tsp45I GTSAC 1 cut(s) 1386
TspDTI ATGAA 6 cut(s) 37, 143, 857, 974, 1229, 1257
TspGWI ACGGA 2 cut(s) 209, 386
TspRI CASTG 4 cut(s) 88, 963, 1225, 1276
Vha464I CTTAAG 1 cut(s) 511
VpaK11BI GGWCC 3 cut(s) 882, 1296, 1427
XapI RAATTY 2 cut(s) 799, 1331
XceI RCATGY 1 cut(s) 421
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 998
XmnI GAANNNNTTC 2 cut(s) 802, 1186
XspI CTAG 3 cut(s) 371, 1149, 1465
Zsp2I ATGCAT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.