Rh3BG300700

ABC transporter D family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0006235
Physical Location & Seq
Forward (+)
30206657 .. 30223275
16619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG300700.1

Sequence Viewer

Length: 3969 bp
ATGCCTTCGCTTCAGCTGTTGCAATTAACTGAGCATGGTCGGAGTTTCATTGCATCAAGGAGGAAAACCTTGCTTCTTGCTACTGGTATTGTAGTTGCTGGTGGGGCTGCTGCATATGTTCAATCGAGATTAACCCATAAAAAGCACAATTCTTTTGGTCAATATAATGGGCTGAATGAAAATAAAGTGACAGAGAATGTCGTGGCGAATGATCATAAGAAAAAGAAACTTCCACAAAAGAGAGGGGGATTGAAGTCTCTTCAAGTCCTTGCTGCAATTCTTTTGTCTGAAATGGGCCAAATGGGTGCGAGGGACCTCTTATCTTTGGTCGGAATAGTGGTGTTGCGAACTGCTTTGAGTAACAGACTTGCGAAAGTCCAAGGGTTTTTATTCCGTGCAGCTTTTCTTCGACGTGTTCCGTTATTTGTCCGGCTGATTTCTGAGAATATTCTATTATGTTTCCTTGCCTCAACTATGCATTCAACTTCACAGTACATAACAGGGACCTTAAGTCTGCGGTTCAGAAAAATATTGACAAAACGTATCCATTCCCATTATTTTGAGAATATTGCATACTACAAAATGTCACACGTTGATGGTCGGATAACTAATCCGGAACAGCGAATTGCAAGTGATGTACCAAGGTTCTGTTCAGAGTTGAGTGAAATCGTACAAGATGATTTAACAGCTGTTACTGATGGTCTCCTTTACTCTTGGCGGCTGTGTTCCTACACCAGTCCTAAATATATATTCTGGATATTGGCATATGTATTGGGAGCAGGGGGGATGATAAGAAAGTTCTCTCCTCCTTTTGGGAAATTAATGTCCGAAGAACAACAATTGGAAGGGGAGTACCGACAGCTTCATTCACGATTAAGAACCCATGCAGAAAGTGTGGCATTCTATGGTGGAGAAAGTAGAGAGGAATCTCATATTCAGAAGAAGTTTAACACACTGGTTGGGCATCTGCGTGTTGTCCTTCATGATCATTGGTGGTTTGGCATGATTCAAGACTTCCTGTTGAAGTATCTTGGTGCCACAGTTGCTGTTATATTGATTATTGAGCCCTTCTTTTCGGGCAGTCTGAGGCCCGACACTTCAACTTTAGGCCGCGCAGAGATGTTAAGCAACTTAAGATATCATACCAGTGTCATAATTTCACTTTTCCAGTCTATGGGAACTCTCGCTTCAAGTTCGAGAAAACTCAATCGTCTCAGTGGTTACGCTGATCGCATTCATGAATTAATGGTCATATCAAGAGAGCTAAGTGCTGTTGATGACAAATCTTCTGGGAGTAAAAATTGCTCTAGTGAGGCTGATTACATTGAATTTGCTGGGGTCAAGGTTGTTACCCCCACGGGTAATGTTTTGGTGGATAACTTGTCACTTAGGGTTGAACCAGGATCTAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAGAGCTCGCTTTTCCGAGTTTTAGGAGGCCTGTGGCCCTTGGTATCTGGCCATATTGTGAAACCTGGTGTTGGAACTGATCTCAACAAAGAAATTTTCTATGTTCCACAAAGACCATACACAGCTGTCGGAACACTTCGAGACCAGTTGATTTATCCTCTTACTGCAGATCAAGAGGTCAAACCACTTACACGTGGAGAAATGGCGGAGCTATTGAGAAATGTTGATCTTCAGTATTTATTAGACCGTTATCCACCTGAGGAAGAGATAAATTGGGGTGATGAATTATCTCTTGGTGAGCAACAAAGATTGGGGATGGCTAGACTTTTCTATCATAAGCCCAAATTTGCAATTCTTGATGAGTGCACAAGTGCTGTCACAACTGACATGGAGGAACGATTCTGTGCTAAAGTTCGAGCAATGGGAACATCATGCATTACTATCTCGCATCGCCCAGCACTAGTTGCATTTCATGATATAGTGCTGTCCTTGGATGGTGAAGGCGGTTGGAGTGTTCATGAGAAAAGGGAGGATTCTCTAGTACGTAATGAAGGTGGGAGAAGTATGTTGAAGCTTTCTGAAACGAACCGGCAGAGTGATTCAATGACAGTTCAGCGAGCATTCGCCTCGACCAAAAAGGATTCTGCAATCTCAAACTCAAAGTCCCAGTCATACATTGCTGAGGTGATAGCAGTTTCTCCCTCTTCTGAGCATAATGTTACAGTTCCGTCTTTCCCACATCTCCAAAGTGCTCCCGCAGCACTGCCATTGAGAGCATCTGCCATGGTCAAAGTACTGATTCCCACTGTTATTGATAATCAAGGAGCACAACTGCTTGCAGTTGCTTTTCTCGTAGTATCGAGGACATGGATTTCTGATCGTATTGCTTCATTAAATGGAACCACTGTGAAGTTTGTTTTGGAACAAGATAAGGCATCATTTATTCATCTAATCGGTGTTAGCGTACTTCAGAGTGCGGCATCTTCTTTCATTGCACCTTCTATAAGGCACTTAAAAGCTAGGCTGGCTCTTGGGTGGAGGACTCGTTTGACTCAACATTTACTTAAAAACTACTTGAGAAATAATGCATTCTATAAGGTATTCAACATGTCAAGCAAAAACATAGACGCAGATCAGAGAGTTACACAGGACCTTGAAAAGTTAACCACTGACTTGTCGGGATTGGTTACTGGATTGGTAAAGCCATCTGTGGACATTCTTTGGTTCACCTGGAGAATGAAGCTTTTGACTGGTCGGAGAGGAGTAACCATATTGTACGCGTATATGTTACTGGGTCTTGGTTTGCTCAGGGCTGCTACCCCAGAATTTGGTGATTTGACAAGTCGTCAACAACAACTTGAAGGAACCTTTAGGTTTATGCATGAAAGACTGCGTGCTCATGCTGAATCTGTTGCTTTCTTTGGGGGTGGTTATAGAGAGAAAGCTATGGTTGAATCAAAGTTCAAGGAGCTACTCCATCACTCCTCGTCACTTTTGAAGAAGCAATGGTTATTTGGTATTCTAGATGATTTTATCACGAAACAACTCCCACATAATGTGACTTGGGGATTGAGCTTGCTATATGCCATTGAACACAAGGGAGACCGAGCATTAATATCTACTCAAGGTGAGCTGGCACATGCATTGCGTTTCTTGGCATCTGTGGTATCTCAAAGCTTTTTAGCTTTCGGTGACATTCTTGAATTGCATAGAAAATTCTTGGAACTCTCTGGCAGCATCAACAGGGTTTTTGAACTTGAAGAGCTTTTAGACGCTGCACAATCTGTGGTTGGCTATTCTAGGGATTCTGAAGCTGGTAACTCATCATCATCTGAGAGGGAAGGTTTTCAATTTGAAGATGCCATTAACTTCTCTGAAGTTGATATCATAACCCCGTCACAGAAATTGTTGGCTAGGAAATTAACATGTGATATAGTACCTGGGAAAAGCTTGCTTGTTACTGGTCCAAATGGGAGTGGAAAAAGTTCTGTGTTTAGAGTTCTTAGAGGTCTTTGGCCCATCATGAGTGGAAGAATCACTAGACCATCTCAAGATGTTAACGGAGTTAGTAGAGATGTTGGATCTGGTTGCGGAGTTTTTTATGTTCCTCAGCGACCATACACATGCTTGGGAACACTCAGGGATCAAATTATATATCCTCTCTCTTTTGATGAGGCGGAGATAAGGGCATTGAAGTTGTATCAAGAAGGTGGAAAATTTGCTGACAACACCAACATTCTGGACATGCGTTTGAGAACTATTCTGGAGAATGTCCGATTAAGTTATCTTTTGGAAAGGGAGGAAGGTGGTTGGGATGCTAATCTCAATTGGGAGGACACTCTCTCTCTCGGGGAACAGCAGAGATTAGGCATGGCACGCCTATTTTTTCACAAACCAAAATTCGCCATCCTTGATGAATGCACCAATGCTACAAGTGTTGATGTTGAAGAACAACTGTATCGGCTTGCAAAAGACATGGGTATCACAGTTGTTACCTCCTCCCAAGTAAGTACTGCTATGATTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006629 GO:0008150 GO:0008152 GO:0009056 GO:0016042 GO:0044238 GO:0071704 GO:1901575
KEGG Pathways
Metabolic & Signaling
ko02010 ko04146 map02010 map04146
Pfam Domains
Protein Families
ABC_membrane_2 ABC_tran

Protein Analysis

1322

Amino Acids

147.63

Weight (kDa)

9.12

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane_2 PF06472 90 - 358 1.7e-88 ABC transporter transmembrane region 2
ABC_tran PF00005 459 - 604 6e-20 ABC transporter
ABC_membrane_2 PF06472 742 - 1008 1.2e-80 ABC transporter transmembrane region 2
ABC_tran PF00005 1120 - 1289 7.8e-16 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1034
AccB7I CCANNNNNTGG 2 cut(s) 1174, 2768
AccII CGCG 2 cut(s) 1113, 2720
AccIII TCCGGA 1 cut(s) 613
AciI CCGC 9 cut(s) 517, 718, 1111, 1646, 1944, 2196, 2417, 3531, 3617
AclWI GGATC 3 cut(s) 1411, 3529, 3591
AcoI YGGCCR 1 cut(s) 1489
AcsI RAATTY 7 cut(s) 1328, 1533, 1784, 2765, 3155, 3656, 3839
AcuI CTGAAG 4 cut(s) 1655, 2393, 3270, 3336
AcvI CACGTG 1 cut(s) 1634
AfiI CCNNNNNNNGG 4 cut(s) 812, 1174, 1511, 2768
AflII CTTAAG 2 cut(s) 508, 1132
AflIII ACRYGT 6 cut(s) 412, 589, 1631, 2547, 2718, 3365
AhdI GACNNNNNGTC 2 cut(s) 510, 2784
AhlI ACTAGT 1 cut(s) 1900
AjiI CACGTC 1 cut(s) 413
AjnI CCWGG 4 cut(s) 1399, 1504, 2669, 3379
AjuI GAANNNNNNNTTGG 6 cut(s) 634, 666, 1716, 1748, 2342, 2374
Alw21I GWGCWC 5 cut(s) 1448, 1808, 2194, 2269, 2839
Alw26I GTCTC 5 cut(s) 261, 707, 1217, 1575, 3036
Alw44I GTGCAC 1 cut(s) 1804
AlwI GGATC 3 cut(s) 1411, 3529, 3591
AlwNI CAGNNNCTG 1 cut(s) 1046
Ama87I CYCGRG 1 cut(s) 3788
Aor13HI TCCGGA 1 cut(s) 613
AoxI GGCC 7 cut(s) 295, 1088, 1108, 1468, 1475, 1489, 3455
ApaLI GTGCAC 1 cut(s) 1804
ApeKI GCWGC 8 cut(s) 107, 110, 272, 398, 2198, 2753, 3174, 3215
ApoI RAATTY 7 cut(s) 1328, 1533, 1784, 2765, 3155, 3656, 3839
ArsI GACNNNNNNTTYG 4 cut(s) 2087, 2093, 2119, 2125
AseI ATTAAT 3 cut(s) 821, 1244, 3053
Asp700I GAANNNNTTC 2 cut(s) 3285, 3424
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
AsuHPI GGTGA 8 cut(s) 1730, 1748, 1949, 2137, 2659, 2783, 3080, 3143
AvaI CYCGRG 1 cut(s) 3788
AvaII GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
AxyI CCTNAGG 1 cut(s) 1698
BaeGI GKGCMC 1 cut(s) 1808
BaeI ACNNNNGTAYC 4 cut(s) 3881, 3904, 3914, 3937
BalI TGGCCA 1 cut(s) 1491
BanI GGYRCC 1 cut(s) 1034
BanII GRGCYC 2 cut(s) 1068, 1448
BbrPI CACGTG 1 cut(s) 1634
Bbv12I GWGCWC 5 cut(s) 1448, 1808, 2194, 2269, 2839
BbvCI CCTCAGC 2 cut(s) 2121, 3549
BbvI GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
BccI CCATC 9 cut(s) 590, 692, 1750, 1928, 2653, 2925, 3467, 3493, 3854
BcgI CGANNNNNNTGC 2 cut(s) 2049, 2083
BciT130I CCWGG 4 cut(s) 1401, 1506, 2671, 3381
BciVI GTATCC 1 cut(s) 554
BclI TGATCA 2 cut(s) 211, 985
BcoDI GTCTC 5 cut(s) 261, 707, 1217, 1575, 3036
BcuI ACTAGT 1 cut(s) 1900
BfaI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
BfmI CTRYAG 1 cut(s) 1605
BfrI CTTAAG 2 cut(s) 508, 1132
BfuI GTATCC 1 cut(s) 554
BmcAI AGTACT 2 cut(s) 2235, 3952
Bme1390I CCNGG 4 cut(s) 1401, 1506, 2671, 3381
Bme18I GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
BmeRI GACNNNNNGTC 2 cut(s) 510, 2784
BmeT110I CYCGRG 1 cut(s) 3788
BmgBI CACGTC 1 cut(s) 413
BmgT120I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
BmiI GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
BmrFI CCNGG 4 cut(s) 1401, 1506, 2671, 3381
BmrI ACTGGG 2 cut(s) 2101, 2741
BmuI ACTGGG 2 cut(s) 2101, 2741
BpmI CTGGAG 2 cut(s) 2692, 3725
Bpu10I CCTNAGC 3 cut(s) 2121, 2747, 3549
BpuEI CTTGAG 3 cut(s) 2536, 3048, 3474
BsaAI YACGTR 2 cut(s) 1634, 1985
BsaBI GATNNNNATC 1 cut(s) 3759
BsaI GGTCTC 3 cut(s) 707, 1575, 3036
BsaJI CCNNGG 7 cut(s) 379, 641, 1356, 1479, 1929, 2223, 3380
BsaWI WCCGGW 1 cut(s) 613
BsaXI ACNNNNNCTCC 2 cut(s) 2470, 2500
Bsc4I CCNNNNNNNGG 4 cut(s) 812, 1174, 1511, 2768
Bse118I RCCGGY 1 cut(s) 2028
Bse21I CCTNAGG 1 cut(s) 1698
Bse3DI GCAATG 6 cut(s) 48, 1866, 2115, 2430, 2951, 3083
Bse8I GATNNNNATC 1 cut(s) 3759
BseAI TCCGGA 1 cut(s) 613
BseBI CCWGG 4 cut(s) 1401, 1506, 2671, 3381
BseDI CCNNGG 7 cut(s) 379, 641, 1356, 1479, 1929, 2223, 3380
BseGI GGATG 5 cut(s) 792, 1761, 1939, 3760, 3846
BseJI GATNNNNATC 1 cut(s) 3759
BseLI CCNNNNNNNGG 4 cut(s) 812, 1174, 1511, 2768
BseMI GCAATG 6 cut(s) 48, 1866, 2115, 2430, 2951, 3083
BseRI GAGGAG 4 cut(s) 795, 2715, 2914, 3928
BseSI GKGCMC 1 cut(s) 1808
BseXI GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
BseYI CCCAGC 2 cut(s) 1334, 1894
BsgI GTGCAG 2 cut(s) 417, 3201
Bsh1236I CGCG 2 cut(s) 1113, 2720
BshFI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
BshNI GGYRCC 1 cut(s) 1034
BsiHKAI GWGCWC 5 cut(s) 1448, 1808, 2194, 2269, 2839
BsiHKCI CYCGRG 1 cut(s) 3788
BsiSI CCGG 3 cut(s) 430, 614, 2029
BslFI GGGAC 3 cut(s) 326, 517, 2089
BslI CCNNNNNNNGG 4 cut(s) 812, 1174, 1511, 2768
BsmAI GTCTC 5 cut(s) 261, 707, 1217, 1575, 3036
BsmBI CGTCTC 1 cut(s) 1217
BsmFI GGGAC 3 cut(s) 326, 517, 2089
BsmI GAATGC 6 cut(s) 478, 899, 1233, 2060, 2528, 3863
BsnI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
Bso31I GGTCTC 3 cut(s) 707, 1575, 3036
BsoBI CYCGRG 1 cut(s) 3788
Bsp1286I GDGCHC 6 cut(s) 1068, 1448, 1808, 2194, 2269, 2839
Bsp13I TCCGGA 1 cut(s) 613
Bsp19I CCATGG 1 cut(s) 2223
BspACI CCGC 9 cut(s) 517, 718, 1111, 1646, 1944, 2196, 2417, 3531, 3617
BspANI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
BspEI TCCGGA 1 cut(s) 613
BspFNI CGCG 2 cut(s) 1113, 2720
BspHI TCATGA 5 cut(s) 982, 1237, 1912, 1957, 3462
BspLI GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
BspMAI CTGCAG 1 cut(s) 1609
BspPI GGATC 3 cut(s) 1411, 3529, 3591
BspQI GCTCTTC 1 cut(s) 3195
BspT107I GGYRCC 1 cut(s) 1034
BspTI CTTAAG 2 cut(s) 508, 1132
BspTNI GGTCTC 3 cut(s) 707, 1575, 3036
BsrDI GCAATG 6 cut(s) 48, 1866, 2115, 2430, 2951, 3083
BsrFI RCCGGY 1 cut(s) 2028
BssAI RCCGGY 1 cut(s) 2028
BssECI CCNNGG 7 cut(s) 379, 641, 1356, 1479, 1929, 2223, 3380
BssT1I CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
Bst2UI CCWGG 4 cut(s) 1401, 1506, 2671, 3381
Bst4CI ACNGT 9 cut(s) 492, 1042, 1688, 2050, 2164, 2248, 2347, 3897, 3928
Bst6I CTCTTC 4 cut(s) 264, 1698, 2149, 3195
BstAFI CTTAAG 2 cut(s) 508, 1132
BstAPI GCANNNNNTGC 1 cut(s) 1904
BstBAI YACGTR 2 cut(s) 1634, 1985
BstDSI CCRYGG 2 cut(s) 1356, 2223
BstF5I GGATG 5 cut(s) 792, 1761, 1939, 3760, 3846
BstFNI CGCG 2 cut(s) 1113, 2720
BstHHI GCGC 1 cut(s) 1115
BstMAI GTCTC 5 cut(s) 261, 707, 1217, 1575, 3036
BstMWI GCNNNNNNNGC 6 cut(s) 104, 1043, 1904, 2198, 2465, 3816
BstNI CCWGG 4 cut(s) 1401, 1506, 2671, 3381
BstNSI RCATGY 5 cut(s) 2551, 3083, 3369, 3567, 3688
BstSCI CCNGG 4 cut(s) 1399, 1504, 2669, 3379
BstSFI CTRYAG 1 cut(s) 1605
BstSLI GKGCMC 1 cut(s) 1808
BstSNI TACGTA 1 cut(s) 1985
BstUI CGCG 2 cut(s) 1113, 2720
BstV1I GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
BstX2I RGATCY 2 cut(s) 1403, 3521
BstXI CCANNNNNNTGG 1 cut(s) 3679
BstYI RGATCY 2 cut(s) 1403, 3521
Bsu36I CCTNAGG 1 cut(s) 1698
BsuI GTATCC 1 cut(s) 554
BsuRI GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
BtgI CCRYGG 2 cut(s) 1356, 2223
BtgZI GCGATG 1 cut(s) 1874
BtrI CACGTC 1 cut(s) 413
BtsCI GGATG 5 cut(s) 792, 1761, 1939, 3760, 3846
BtsI GCAGTG 2 cut(s) 1441, 2201
BtsIMutI CAGTG 8 cut(s) 953, 1153, 1222, 1441, 2201, 2244, 2343, 2607
CaiI CAGNNNCTG 1 cut(s) 1046
CciI TCATGA 5 cut(s) 982, 1237, 1912, 1957, 3462
CfoI GCGC 1 cut(s) 1115
Cfr10I RCCGGY 1 cut(s) 2028
Cfr13I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
CseI GACGC 2 cut(s) 2576, 3221
CsiI ACCWGGT 1 cut(s) 1504
CspCI CAANNNNNGTGG 2 cut(s) 2233, 2268
DriI GACNNNNNGTC 2 cut(s) 510, 2784
EaeI YGGCCR 1 cut(s) 1489
Eam1104I CTCTTC 4 cut(s) 264, 1698, 2149, 3195
Eam1105I GACNNNNNGTC 2 cut(s) 510, 2784
EarI CTCTTC 4 cut(s) 264, 1698, 2149, 3195
EciI GGCGGA 2 cut(s) 1661, 3632
Ecl136II GAGCTC 1 cut(s) 1446
Eco105I TACGTA 1 cut(s) 1985
Eco130I CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
Eco147I AGGCCT 1 cut(s) 1470
Eco24I GRGCYC 2 cut(s) 1068, 1448
Eco31I GGTCTC 3 cut(s) 707, 1575, 3036
Eco32I GATATC 2 cut(s) 1139, 3325
Eco47I GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
Eco53kI GAGCTC 1 cut(s) 1446
Eco57I CTGAAG 4 cut(s) 1655, 2393, 3270, 3336
Eco72I CACGTG 1 cut(s) 1634
Eco81I CCTNAGG 1 cut(s) 1698
Eco88I CYCGRG 1 cut(s) 3788
EcoICRI GAGCTC 1 cut(s) 1446
EcoO109I RGGNCCY 3 cut(s) 313, 504, 2590
EcoRII CCWGG 4 cut(s) 1399, 1504, 2669, 3379
EcoRV GATATC 2 cut(s) 1139, 3325
EcoT14I CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
EcoT22I ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
EcoT38I GRGCYC 2 cut(s) 1068, 1448
ErhI CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
Esp3I CGTCTC 1 cut(s) 1217
FaqI GGGAC 3 cut(s) 326, 517, 2089
FauI CCCGC 1 cut(s) 2203
FauNDI CATATG 2 cut(s) 115, 766
FbaI TGATCA 2 cut(s) 211, 985
FokI GGATG 5 cut(s) 799, 1768, 1946, 3767, 3833
FriOI GRGCYC 2 cut(s) 1068, 1448
FspBI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
GlaI GCGC 1 cut(s) 1114
GsaI CCCAGC 2 cut(s) 1338, 1898
GsuI CTGGAG 2 cut(s) 2692, 3725
HaeIII GGCC 7 cut(s) 297, 1090, 1110, 1470, 1477, 1491, 3457
HapII CCGG 3 cut(s) 430, 614, 2029
HgaI GACGC 2 cut(s) 2576, 3221
HhaI GCGC 1 cut(s) 1115
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 3 cut(s) 2604, 2789, 3499
HindII GTYRAC 3 cut(s) 2604, 2789, 3499
HindIII AAGCTT 4 cut(s) 2012, 2681, 3115, 3388
HpaI GTTAAC 2 cut(s) 2604, 3499
HpaII CCGG 3 cut(s) 430, 614, 2029
HphI GGTGA 8 cut(s) 1730, 1748, 1949, 2137, 2659, 2783, 3080, 3143
Hpy166II GTNNAC 6 cut(s) 1806, 2604, 2653, 2667, 2789, 3499
Hpy8I GTNNAC 6 cut(s) 1806, 2604, 2653, 2667, 2789, 3499
Hpy99I CGWCG 1 cut(s) 414
HpyCH4III ACNGT 9 cut(s) 492, 1042, 1688, 2050, 2164, 2248, 2347, 3897, 3928
HpyCH4IV ACGT 5 cut(s) 412, 541, 591, 1633, 1984
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 1043, 1904, 2198, 2465, 3816
HpySE526I ACGT 5 cut(s) 412, 541, 591, 1633, 1984
HspAI GCGC 1 cut(s) 1113
Kpn2I TCCGGA 1 cut(s) 613
Ksp22I TGATCA 2 cut(s) 211, 985
KspAI GTTAAC 2 cut(s) 2604, 3499
LguI GCTCTTC 1 cut(s) 3195
LmnI GCTCC 5 cut(s) 776, 1648, 2197, 2264, 2908
Lsp1109I GCAGC 8 cut(s) 94, 97, 259, 410, 2210, 2740, 3186, 3202
MabI ACCWGGT 1 cut(s) 1504
MaeI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
MaeII ACGT 5 cut(s) 412, 541, 591, 1633, 1984
MfeI CAATTG 2 cut(s) 839, 3766
MflI RGATCY 2 cut(s) 1403, 3521
MhlI GDGCHC 6 cut(s) 1068, 1448, 1808, 2194, 2269, 2839
MlsI TGGCCA 1 cut(s) 1491
MluI ACGCGT 1 cut(s) 2718
MluNI TGGCCA 1 cut(s) 1491
MlyI GAGTC 2 cut(s) 2476, 2485
MmeI TCCRAC 8 cut(s) 20, 310, 581, 1492, 1549, 1928, 2675, 3499
Mox20I TGGCCA 1 cut(s) 1491
Mph1103I ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
MroI TCCGGA 1 cut(s) 613
MroXI GAANNNNTTC 2 cut(s) 3285, 3424
MscI TGGCCA 1 cut(s) 1491
MslI CAYNNNNRTG 4 cut(s) 594, 969, 1146, 3562
Msp20I TGGCCA 1 cut(s) 1491
MspA1I CMGCKG 3 cut(s) 16, 689, 1565
MspCI CTTAAG 2 cut(s) 508, 1132
MspI CCGG 3 cut(s) 430, 614, 2029
MspR9I CCNGG 4 cut(s) 1401, 1506, 2671, 3381
MunI CAATTG 2 cut(s) 839, 3766
Mva1269I GAATGC 6 cut(s) 478, 899, 1233, 2060, 2528, 3863
MvaI CCWGG 4 cut(s) 1401, 1506, 2671, 3381
MvnI CGCG 2 cut(s) 1113, 2720
MwoI GCNNNNNNNGC 6 cut(s) 104, 1043, 1904, 2198, 2465, 3816
NcoI CCATGG 1 cut(s) 2223
NdeI CATATG 2 cut(s) 115, 766
NlaIV GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
NmuCI GTSAC 8 cut(s) 187, 585, 1383, 1816, 2928, 2998, 3131, 3336
NsiI ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
NspI RCATGY 5 cut(s) 2551, 3083, 3369, 3567, 3688
PagI TCATGA 5 cut(s) 982, 1237, 1912, 1957, 3462
PceI AGGCCT 1 cut(s) 1470
PciI ACATGT 2 cut(s) 2547, 3365
PciSI GCTCTTC 1 cut(s) 3195
PcsI WCGNNNNNNNCGW 1 cut(s) 2400
PctI GAATGC 6 cut(s) 478, 899, 1233, 2060, 2528, 3863
PdmI GAANNNNTTC 2 cut(s) 3285, 3424
PflMI CCANNNNNTGG 2 cut(s) 1174, 2768
PleI GAGTC 2 cut(s) 2476, 2485
PmaCI CACGTG 1 cut(s) 1634
PmlI CACGTG 1 cut(s) 1634
PpsI GAGTC 2 cut(s) 2476, 2485
Ppu21I YACGTR 2 cut(s) 1634, 1985
PpuMI RGGWCCY 3 cut(s) 313, 504, 2590
PscI ACATGT 2 cut(s) 2547, 3365
PshBI ATTAAT 3 cut(s) 821, 1244, 3053
Psp124BI GAGCTC 1 cut(s) 1448
Psp5II RGGWCCY 3 cut(s) 313, 504, 2590
Psp6I CCWGG 4 cut(s) 1399, 1504, 2669, 3379
PspCI CACGTG 1 cut(s) 1634
PspFI CCCAGC 2 cut(s) 1334, 1894
PspGI CCWGG 4 cut(s) 1399, 1504, 2669, 3379
PspN4I GGNNCC 5 cut(s) 314, 505, 1036, 2341, 2806
PspPI GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
PspPPI RGGWCCY 3 cut(s) 313, 504, 2590
PstI CTGCAG 1 cut(s) 1609
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 2 cut(s) 1403, 3521
PvuII CAGCTG 3 cut(s) 16, 689, 1565
RseI CAYNNNNRTG 4 cut(s) 594, 969, 1146, 3562
SacI GAGCTC 1 cut(s) 1448
SapI GCTCTTC 1 cut(s) 3195
Sau96I GGNCC 9 cut(s) 295, 313, 504, 1089, 1424, 1476, 2590, 3404, 3456
ScaI AGTACT 2 cut(s) 2235, 3952
SchI GAGTC 2 cut(s) 2476, 2485
ScrFI CCNGG 4 cut(s) 1401, 1506, 2671, 3381
SduI GDGCHC 6 cut(s) 1068, 1448, 1808, 2194, 2269, 2839
SexAI ACCWGGT 1 cut(s) 1504
SfcI CTRYAG 1 cut(s) 1605
SinI GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
SmiMI CAYNNNNRTG 4 cut(s) 594, 969, 1146, 3562
SmlI CTYRAG 5 cut(s) 508, 1132, 2515, 3063, 3489
SmoI CTYRAG 5 cut(s) 508, 1132, 2515, 3063, 3489
SnaBI TACGTA 1 cut(s) 1985
SpeI ACTAGT 1 cut(s) 1900
SseBI AGGCCT 1 cut(s) 1470
SsiI CCGC 9 cut(s) 517, 718, 1111, 1646, 1944, 2196, 2417, 3531, 3617
SspI AATATT 3 cut(s) 448, 531, 568
SspMI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
SstI GAGCTC 1 cut(s) 1448
StuI AGGCCT 1 cut(s) 1470
StyD4I CCNGG 4 cut(s) 1399, 1504, 2669, 3379
StyI CCWWGG 5 cut(s) 379, 641, 1479, 1929, 2223
TaaI ACNGT 9 cut(s) 492, 1042, 1688, 2050, 2164, 2248, 2347, 3897, 3928
TaiI ACGT 5 cut(s) 415, 544, 594, 1636, 1987
TaqI TCGA 7 cut(s) 125, 409, 1196, 1579, 1855, 2069, 2300
TaqII GACCGA 1 cut(s) 3060
TatI WGTACW 3 cut(s) 492, 2233, 3950
TauI GCSGC 3 cut(s) 721, 1113, 2420
TscAI CASTG 8 cut(s) 960, 1153, 1222, 1441, 2208, 2251, 2350, 2614
TseFI GTSAC 8 cut(s) 187, 585, 1383, 1816, 2928, 2998, 3131, 3336
TseI GCWGC 8 cut(s) 107, 110, 272, 398, 2198, 2753, 3174, 3215
Tsp45I GTSAC 8 cut(s) 187, 585, 1383, 1816, 2928, 2998, 3131, 3336
TspGWI ACGGA 4 cut(s) 383, 408, 2157, 3516
TspRI CASTG 8 cut(s) 960, 1153, 1222, 1441, 2208, 2251, 2350, 2614
Van91I CCANNNNNTGG 2 cut(s) 1174, 2768
Vha464I CTTAAG 2 cut(s) 508, 1132
VneI GTGCAC 1 cut(s) 1804
VpaK11BI GGWCC 5 cut(s) 313, 504, 1424, 2590, 3404
VspI ATTAAT 3 cut(s) 821, 1244, 3053
XapI RAATTY 7 cut(s) 1328, 1533, 1784, 2765, 3155, 3656, 3839
XbaI TCTAGA 1 cut(s) 2962
XceI RCATGY 5 cut(s) 2551, 3083, 3369, 3567, 3688
XmnI GAANNNNTTC 2 cut(s) 3285, 3424
XspI CTAG 9 cut(s) 1308, 1761, 1901, 1979, 2460, 2963, 3240, 3354, 3480
ZrmI AGTACT 2 cut(s) 2235, 3952
Zsp2I ATGCAT 5 cut(s) 480, 1877, 2530, 2823, 3085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.