ABC transporter D family member
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g25840 |
| pyrus_communis | pycom02g21500 pycom07g05110 |
| rosa_multiflora | Rmu_sc0029285.1_g000001 |
| rosa_samantha | Rh3CG299000 Rh3DG294900 |
| rosa_wichuraiana | Rw0G006740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 240, 326 |
| AclWI | GGATC | 2 cut(s) | 238, 300 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 45 |
| AfaI | GTAC | 1 cut(s) | 87 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 48 |
| AflIII | ACRYGT | 1 cut(s) | 74 |
| AjnI | CCWGG | 1 cut(s) | 88 |
| AluBI | AGCT | 1 cut(s) | 99 |
| AluI | AGCT | 1 cut(s) | 99 |
| AlwI | GGATC | 2 cut(s) | 238, 300 |
| AoxI | GGCC | 2 cut(s) | 3, 164 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 133 |
| AspS9I | GGNCC | 2 cut(s) | 113, 165 |
| AvaII | GGWCC | 1 cut(s) | 113 |
| BbvCI | CCTCAGC | 1 cut(s) | 258 |
| BccI | CCATC | 2 cut(s) | 176, 202 |
| BciT130I | CCWGG | 1 cut(s) | 90 |
| BfaI | CTAG | 2 cut(s) | 63, 189 |
| Bme1390I | CCNGG | 1 cut(s) | 90 |
| Bme18I | GGWCC | 1 cut(s) | 113 |
| BmgT120I | GGNCC | 2 cut(s) | 113, 165 |
| BmrFI | CCNGG | 1 cut(s) | 90 |
| Bpu10I | CCTNAGC | 1 cut(s) | 258 |
| BpuEI | CTTGAG | 1 cut(s) | 183 |
| BsaJI | CCNNGG | 1 cut(s) | 89 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 48 |
| Bse1I | ACTGG | 1 cut(s) | 115 |
| Bse3DI | GCAATG | 1 cut(s) | 345 |
| BseBI | CCWGG | 1 cut(s) | 90 |
| BseDI | CCNNGG | 1 cut(s) | 89 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 48 |
| BseMI | GCAATG | 1 cut(s) | 345 |
| BseMII | CTCAG | 2 cut(s) | 272, 301 |
| BseNI | ACTGG | 1 cut(s) | 115 |
| BshFI | GGCC | 2 cut(s) | 5, 166 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 48 |
| BsnI | GGCC | 2 cut(s) | 5, 166 |
| Bsp143I | GATC | 2 cut(s) | 230, 292 |
| BspACI | CCGC | 2 cut(s) | 240, 326 |
| BspANI | GGCC | 2 cut(s) | 5, 166 |
| BspCNI | CTCAG | 2 cut(s) | 271, 300 |
| BspHI | TCATGA | 1 cut(s) | 171 |
| BspPI | GGATC | 2 cut(s) | 238, 300 |
| BsrDI | GCAATG | 1 cut(s) | 345 |
| BsrI | ACTGG | 1 cut(s) | 115 |
| BssECI | CCNNGG | 1 cut(s) | 89 |
| BssMI | GATC | 2 cut(s) | 230, 292 |
| Bst2UI | CCWGG | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 1 cut(s) | 101 |
| BstDEI | CTNAG | 3 cut(s) | 152, 258, 287 |
| BstKTI | GATC | 2 cut(s) | 233, 295 |
| BstMBI | GATC | 2 cut(s) | 230, 292 |
| BstNI | CCWGG | 1 cut(s) | 90 |
| BstNSI | RCATGY | 2 cut(s) | 78, 276 |
| BstSCI | CCNGG | 1 cut(s) | 88 |
| BstX2I | RGATCY | 1 cut(s) | 230 |
| BstYI | RGATCY | 1 cut(s) | 230 |
| BsuRI | GGCC | 2 cut(s) | 5, 166 |
| Cac8I | GCNNGC | 1 cut(s) | 101 |
| CciI | TCATGA | 1 cut(s) | 171 |
| Cfr13I | GGNCC | 2 cut(s) | 113, 165 |
| Csp6I | GTAC | 1 cut(s) | 86 |
| CviAII | CATG | 3 cut(s) | 75, 172, 273 |
| CviJI | RGCY | 4 cut(s) | 5, 62, 99, 166 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 62, 99, 166 |
| CviQI | GTAC | 1 cut(s) | 86 |
| DdeI | CTNAG | 3 cut(s) | 152, 258, 287 |
| DpnI | GATC | 2 cut(s) | 232, 294 |
| DpnII | GATC | 2 cut(s) | 230, 292 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EciI | GGCGGA | 1 cut(s) | 341 |
| Eco32I | GATATC | 1 cut(s) | 34 |
| Eco47I | GGWCC | 1 cut(s) | 113 |
| Eco57I | CTGAAG | 1 cut(s) | 45 |
| EcoRII | CCWGG | 1 cut(s) | 88 |
| EcoRV | GATATC | 1 cut(s) | 34 |
| FaeI | CATG | 3 cut(s) | 78, 175, 276 |
| FaiI | YATR | 8 cut(s) | 38, 76, 83, 173, 252, 274, 302, 304 |
| FatI | CATG | 3 cut(s) | 74, 171, 272 |
| FspBI | CTAG | 2 cut(s) | 63, 189 |
| HaeIII | GGCC | 2 cut(s) | 5, 166 |
| Hin1II | CATG | 3 cut(s) | 78, 175, 276 |
| HindIII | AAGCTT | 1 cut(s) | 97 |
| HinfI | GANTC | 1 cut(s) | 183 |
| Hpy188I | TCNGA | 1 cut(s) | 25 |
| Hpy188III | TCNNGA | 3 cut(s) | 172, 200, 353 |
| HpyF3I | CTNAG | 3 cut(s) | 152, 258, 287 |
| Hsp92II | CATG | 3 cut(s) | 78, 175, 276 |
| Kzo9I | GATC | 2 cut(s) | 230, 292 |
| LpnPI | CCDG | 5 cut(s) | 75, 96, 102, 219, 274 |
| MaeI | CTAG | 2 cut(s) | 63, 189 |
| MaeIII | GTNAC | 2 cut(s) | 45, 106 |
| MalI | GATC | 2 cut(s) | 232, 294 |
| MboI | GATC | 2 cut(s) | 230, 292 |
| MboII | GAAGA | 1 cut(s) | 192 |
| MflI | RGATCY | 1 cut(s) | 230 |
| MluCI | AATT | 3 cut(s) | 53, 68, 297 |
| MnlI | CCTC | 4 cut(s) | 149, 267, 316, 318 |
| MroXI | GAANNNNTTC | 1 cut(s) | 133 |
| MseI | TTAA | 3 cut(s) | 15, 71, 207 |
| MspR9I | CCNGG | 1 cut(s) | 90 |
| MvaI | CCWGG | 1 cut(s) | 90 |
| NdeII | GATC | 2 cut(s) | 230, 292 |
| NlaIII | CATG | 3 cut(s) | 78, 175, 276 |
| NmuCI | GTSAC | 1 cut(s) | 45 |
| NspI | RCATGY | 2 cut(s) | 78, 276 |
| PagI | TCATGA | 1 cut(s) | 171 |
| PciI | ACATGT | 1 cut(s) | 74 |
| PdmI | GAANNNNTTC | 1 cut(s) | 133 |
| PfeI | GAWTC | 1 cut(s) | 183 |
| PscI | ACATGT | 1 cut(s) | 74 |
| Psp6I | CCWGG | 1 cut(s) | 88 |
| PspGI | CCWGG | 1 cut(s) | 88 |
| PspPI | GGNCC | 2 cut(s) | 113, 165 |
| PsuI | RGATCY | 1 cut(s) | 230 |
| RsaI | GTAC | 1 cut(s) | 87 |
| RsaNI | GTAC | 1 cut(s) | 86 |
| SaqAI | TTAA | 3 cut(s) | 15, 71, 207 |
| Sau3AI | GATC | 2 cut(s) | 230, 292 |
| Sau96I | GGNCC | 2 cut(s) | 113, 165 |
| ScrFI | CCNGG | 1 cut(s) | 90 |
| SetI | ASST | 4 cut(s) | 91, 101, 160, 268 |
| SinI | GGWCC | 1 cut(s) | 113 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| Sse9I | AATT | 3 cut(s) | 53, 68, 297 |
| SsiI | CCGC | 2 cut(s) | 240, 326 |
| SspMI | CTAG | 2 cut(s) | 63, 189 |
| StyD4I | CCNGG | 1 cut(s) | 88 |
| TasI | AATT | 3 cut(s) | 53, 68, 297 |
| TfiI | GAWTC | 1 cut(s) | 183 |
| Tru1I | TTAA | 3 cut(s) | 15, 71, 207 |
| Tru9I | TTAA | 3 cut(s) | 15, 71, 207 |
| TseFI | GTSAC | 1 cut(s) | 45 |
| Tsp45I | GTSAC | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 356 |
| TspGWI | ACGGA | 2 cut(s) | 64, 225 |
| VpaK11BI | GGWCC | 1 cut(s) | 113 |
| XceI | RCATGY | 2 cut(s) | 78, 276 |
| XmnI | GAANNNNTTC | 1 cut(s) | 133 |
| XspI | CTAG | 2 cut(s) | 63, 189 |