Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0016589

Physical Location & Seq

Genomic Coordinates Forward (+)

8172207 .. 8174898

Gene Structure 2692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCTGCAACGACCCTTTTGAAAGGAAGCTGCACCAGCATCAGCATCAGCGTCCCTCGTCTCTTCACCTTTGCCCACGCGCACCGCCCTCTCAATCTCCACCAAATCAATTCCGCCGTCAATCAAAATTACTATCACATCCGCATTCGCCGCGGAAAACCCACACTATCACCACCACCAAGAATCGCTGCCTTGTGGTACTCATCTTCTCCCTTCTGCACCGCCGCCTCGGCCGACGACGCTTCTGCAACTGCCGCTACTGCTTCTTCTGAGGTAGTGAGGGATGCGGCTGTGGTCGACGAGGCGGCGCCGGTGAGCAAGTTTGCCGATGAACAGAAGAAGATAAAGGATGCTGCCGACGTGCTCGACATAAGGGTTGGCCGAGTTCTTAAGGCATGGAGGCATGAGGAGGCTGATTCTCTTTATGTGGAGGAAGTTGACGTCGGCGAGCCCGAACCCAGAACCATCTGCAGTGGCCTTGTCAAATATGTGCCTCTTGATCACCTTCAGGATAGAAATGTAGTTGTGCTTGCTAATCTGAAGCCGAGGAACATGCGCGGTGTGAAGTCTAATGGAATGCTTATGGCAGCTTCGGATGCTTCCCATGAGAATGTTGAGCTTCTTGTGCCGCCTGAGGGTTCCCTCCCTGGCCAAAGAGTATGGTTTGGCTCTGAAAAGGATCATCAAAATCAGCCTCCTCCTGCCTCGCCTAACCAGGTACTCTCCGTGTCTAATCCTCAACTGTCGAATGTGTCATTTCCAAGCAAGCATGCTAGTATAATTCAAAAGCTAGTCGCACTCCATGAAAATTGCAAATCGATGTTTGAGCTCAAGCAAATACATGCTCTGCTCCTCACTTTAGGCCTCTCCCAACACCACTTGTTGACTTCCAAAATCCTCTCTTTCTCAGCGCTATCCAACTTGGGTAATATCGAATACTCATATCGAGTTTTCTCACAGCTCTCTCACCCAACAATTTTTTATTGGAACACAGTTATTAGAGGTTACTCCAACAGCAAAAACCCGAATCGCTCCCTATCAGTTTTCGTCGAAATGTTGCGTCATGGGGTCTCTCCGGATTATTTAACCTATCCTTTCCTTGTAAAAGCGTCAGCTCGTTTATTGAAGCGAGAACTGGGTATGGCTGTGCATGCCCATATTGCTAAAGATGGTTTCGAGTCTGATAGGTTCATAAGCAATTCCTTGATCCATATGTATGCTACTTGTCGAGATATCATGTATGCACGTAAGGTGTTTGATGGAATCCCTGTGAGAAACTCGGTTTCCTGGAATTCGATGTTGGATGGGTATGCAAAGTGTGGGGATGTGAATTCAGCACGGGAAGTATTTGAGTTGATGCCGGAGCATAATGTTGTGTCCTGGAGTTCTTTGATTGATGGGTATGTTAAGGCTGGGGAGTTTAGTGAGGCTTTGGCAGTATTTGAGAGAATGTGCGTTGTGGGGCCTAAAGCAAACGAGGTAACAATGGTGAGTGTTTTGAGCGCATGCACGCACCTAGGTGCGCTTGAACAAGGGAAGGTGATGCATTGTTATATGGCTGAGAATGAATTGCCATTAACTTTGGTGTTGCAAACATCACTTGTGGATATGTATGCAAAATGTGGGGCAATAGAGGAGGCTTTAGGTGTGTTTCGTGGGGGTTCACTGCATCAATCTGATGTGTTGATATGGAATGCAATGATTGGAGGACTTGCAATGCATGGGTTAGTCCAACAGGCACTCAAAATTTTTAGCGAAATGCAAATAATCGGGATTGCTCCAGATGAGATAACGTACTTGTGCTTGTTGAGTGCTTGTGCCCATGGGGGATTAGTGAAGGAAGCTTGGCATTTCTTTGAATGTATTGGTAAACATGGTATGACACCCAAGTGTGAGCATTATGCTTGCATGGTGGATGTTTTAGCACGTGGAGGCCAGGTAGTGGAGGCATACCAGTTTATATGTCAAATGTCCAAGGAGCCAACAGCTTCAATGTTGGGTGCTCTACTTAGCGGATGCATGAACCATGGAAAATTAGATCTAGCAGAAATTGTCGGAAAGAAGCTTATAGAGATACAGCCAGACCATGATGGTAGATATGTTGGTTTATCAAATGTTTATGCTGTTTTCAGACGCTGGGATGATGCAAGAAGCCTGCGAGAAGCCATGGAGAGGAGAGGGGTGAAGAAGTCCCCTGGTTTTAGTTTTGTGGAGATATTTGGAACCCTTCACAAATTTATAGCGCATGATAAATCATATCCTGAATCACAAGAAATTTATACGATGCTGAATTTTATTGTGAACCAGATTAAGTTTGATAAGGAGTACAGAAATCAAGATTATTTTTTTCATGCAACAGGAAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

790

Amino Acids

87.62

Weight (kDa)

6.9

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_bind	PF01588	124 - 218	1.9e-30	Putative tRNA binding domain
PPR_2	PF13041	324 - 371	1.4e-08	PPR repeat family
PPR_2	PF13041	426 - 458	1.8e-06	PPR repeat family
PPR	PF01535	428 - 458	6e-08	PPR repeat
PPR_2	PF13041	457 - 503	1.2e-08	PPR repeat family
PPR	PF01535	459 - 485	1.5e-07	PPR repeat
PPR_2	PF13041	560 - 608	7e-12	PPR repeat family
PPR	PF01535	563 - 591	8.5e-06	PPR repeat
E_motif	PF20431	676 - 738	8.6e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08305
fragaria_vesca	FvH4_3g24460
pyrus_communis	pycom03g09570
rosa_chinensis	RchiOBHm_Chr5g0043961
rosa_laevigata	RLG00000034228
rosa_multiflora	Rmu_co8265095.1_g000001 Rmu_sc0002988.1_g000009 Rmu_sc0006669.1_g000009
rosa_roxburghii	Rroxscaffold_1G00037100
rosa_rugosa	Rorug05G0209400
rosa_samantha	Rh5AG293800 Rh5BG302000 Rh5CG329200
rosa_wichuraiana	Rw5G027220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	444
AccB1I	GGYRCC	1 cut(s)	307
AccB7I	CCANNNNNTGG	1 cut(s)	1942
AccI	GTMKAC	1 cut(s)	297
AccII	CGCG	3 cut(s)	80, 153, 558
AccIII	TCCGGA	1 cut(s)	1075
AclWI	GGATC	2 cut(s)	687, 1201
AcoI	YGGCCR	3 cut(s)	231, 379, 649
AcsI	RAATTY	6 cut(s)	1291, 1330, 1746, 2234, 2274, 2290
AcuI	CTGAAG	2 cut(s)	491, 560
AcvI	CACGTG	1 cut(s)	1928
AcyI	GRCGYC	2 cut(s)	308, 441
AfaI	GTAC	4 cut(s)	200, 720, 1796, 2327
AfeI	AGCGCT	1 cut(s)	912
AfiI	CCNNNNNNNGG	3 cut(s)	635, 1942, 2172
AflII	CTTAAG	1 cut(s)	389
AgsI	TTSAA	6 cut(s)	22, 785, 1126, 1529, 1859, 1992
AjiI	CACGTC	1 cut(s)	361
AjnI	CCWGG	6 cut(s)	646, 714, 1286, 1379, 1935, 2194
AjuI	GAANNNNNNNTTGG	2 cut(s)	1283, 1315
AleI	CACNNNNGTG	2 cut(s)	1518, 1888
Alw21I	GWGCWC	3 cut(s)	366, 831, 2005
Alw26I	GTCTC	2 cut(s)	65, 1075
AlwI	GGATC	2 cut(s)	687, 1201
AlwNI	CAGNNNCTG	1 cut(s)	2136
Aor13HI	TCCGGA	1 cut(s)	1075
Aor51HI	AGCGCT	1 cut(s)	912
AoxI	GGCC	7 cut(s)	231, 379, 475, 649, 862, 1463, 1933
ApeKI	GCWGC	5 cut(s)	5, 30, 188, 353, 587
ApoI	RAATTY	6 cut(s)	1291, 1330, 1746, 2234, 2274, 2290
AspA2I	CCTAGG	1 cut(s)	1516
AspLEI	GCGC	7 cut(s)	82, 310, 558, 913, 1505, 1525, 2245
AspS9I	GGNCC	1 cut(s)	1463
AsuHPI	GGTGA	8 cut(s)	58, 162, 325, 494, 959, 1501, 1552, 2194
AvrII	CCTAGG	1 cut(s)	1516
AxyI	CCTNAGG	1 cut(s)	633
BaeGI	GKGCMC	1 cut(s)	1822
BalI	TGGCCA	1 cut(s)	651
BanI	GGYRCC	1 cut(s)	307
BanII	GRGCYC	2 cut(s)	453, 831
BbrPI	CACGTG	1 cut(s)	1928
Bbv12I	GWGCWC	3 cut(s)	366, 831, 2005
BbvI	GCAGC	4 cut(s)	17, 175, 340, 599
BccI	CCATC	6 cut(s)	473, 1163, 1253, 1298, 1391, 2084
BceAI	ACGGC	1 cut(s)	101
BcgI	CGANNNNNNTGC	4 cut(s)	227, 261, 535, 569
BciT130I	CCWGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
BclI	TGATCA	1 cut(s)	499
BcoDI	GTCTC	2 cut(s)	65, 1075
BfaI	CTAG	4 cut(s)	774, 791, 1517, 2042
BfmI	CTRYAG	1 cut(s)	469
BfoI	RGCGCY	2 cut(s)	311, 914
BfrI	CTTAAG	1 cut(s)	389
BglI	GCCNNNNNGGC	1 cut(s)	230
BglII	AGATCT	1 cut(s)	2038
BlnI	CCTAGG	1 cut(s)	1516
Bme1390I	CCNGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
BmgBI	CACGTC	1 cut(s)	361
BmgT120I	GGNCC	1 cut(s)	1463
BmiI	GGNNCC	5 cut(s)	309, 640, 1464, 1980, 2224
BmrFI	CCNGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
BmrI	ACTGGG	1 cut(s)	1145
BmuI	ACTGGG	1 cut(s)	1145
BpmI	CTGGAG	2 cut(s)	1402, 1764
BpuEI	CTTGAG	1 cut(s)	815
Bsa29I	ATCGAT	1 cut(s)	818
BsaAI	YACGTR	2 cut(s)	1247, 1928
BsaHI	GRCGYC	2 cut(s)	308, 441
BsaI	GGTCTC	1 cut(s)	1075
BsaWI	WCCGGW	1 cut(s)	1075
BsaXI	ACNNNNNCTCC	2 cut(s)	1923, 1953
Bsc4I	CCNNNNNNNGG	3 cut(s)	635, 1942, 2172
Bse118I	RCCGGY	1 cut(s)	310
Bse1I	ACTGG	2 cut(s)	1140, 1954
Bse21I	CCTNAGG	1 cut(s)	633
Bse3DI	GCAATG	2 cut(s)	1704, 1722
BseAI	TCCGGA	1 cut(s)	1075
BseBI	CCWGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
BseCI	ATCGAT	1 cut(s)	818
BseGI	GGATG	9 cut(s)	138, 289, 355, 601, 1309, 1330, 1921, 2021, 2146
BseLI	CCNNNNNNNGG	3 cut(s)	635, 1942, 2172
BseMI	GCAATG	2 cut(s)	1704, 1722
BseMII	CTCAG	4 cut(s)	261, 624, 921, 1551
BseNI	ACTGG	2 cut(s)	1140, 1954
BseRI	GAGGAG	5 cut(s)	422, 687, 842, 1649, 2188
BseSI	GKGCMC	1 cut(s)	1822
BseX3I	CGGCCG	1 cut(s)	231
BseXI	GCAGC	4 cut(s)	17, 175, 340, 599
BseYI	CCCAGC	2 cut(s)	1412, 2136
BsgI	GTGCAG	2 cut(s)	16, 202
Bsh1236I	CGCG	3 cut(s)	80, 153, 558
Bsh1285I	CGRYCG	1 cut(s)	234
BshFI	GGCC	7 cut(s)	233, 381, 477, 651, 864, 1465, 1935
BshNI	GGYRCC	1 cut(s)	307
BshVI	ATCGAT	1 cut(s)	818
BsiEI	CGRYCG	1 cut(s)	234
BsiHKAI	GWGCWC	3 cut(s)	366, 831, 2005
BsiSI	CCGG	3 cut(s)	311, 1076, 1361
BslFI	GGGAC	2 cut(s)	38, 2176
BslI	CCNNNNNNNGG	3 cut(s)	635, 1942, 2172
BsmAI	GTCTC	2 cut(s)	65, 1075
BsmBI	CGTCTC	1 cut(s)	65
BsmFI	GGGAC	2 cut(s)	38, 2176
BsmI	GAATGC	3 cut(s)	144, 582, 1699
BsnI	GGCC	7 cut(s)	233, 381, 477, 651, 864, 1465, 1935
Bso31I	GGTCTC	1 cut(s)	1075
Bsp1286I	GDGCHC	5 cut(s)	366, 453, 831, 1822, 2005
Bsp13I	TCCGGA	1 cut(s)	1075
Bsp143I	GATC	4 cut(s)	499, 679, 1206, 2038
Bsp19I	CCATGG	3 cut(s)	1822, 2026, 2166
BspANI	GGCC	7 cut(s)	233, 381, 477, 651, 864, 1465, 1935
BspCNI	CTCAG	4 cut(s)	262, 625, 920, 1552
BspDI	ATCGAT	1 cut(s)	818
BspEI	TCCGGA	1 cut(s)	1075
BspFNI	CGCG	3 cut(s)	80, 153, 558
BspLI	GGNNCC	5 cut(s)	309, 640, 1464, 1980, 2224
BspMAI	CTGCAG	1 cut(s)	473
BspPI	GGATC	2 cut(s)	687, 1201
BspT107I	GGYRCC	1 cut(s)	307
BspTI	CTTAAG	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	1075
BsrDI	GCAATG	2 cut(s)	1704, 1722
BsrFI	RCCGGY	1 cut(s)	310
BsrI	ACTGG	2 cut(s)	1140, 1954
BssAI	RCCGGY	1 cut(s)	310
BssMI	GATC	4 cut(s)	499, 679, 1206, 2038
BssNI	GRCGYC	2 cut(s)	308, 441
BssT1I	CCWWGG	5 cut(s)	1516, 1822, 1974, 2026, 2166
Bst2UI	CCWGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
Bst4CI	ACNGT	2 cut(s)	744, 994
Bst6I	CTCTTC	1 cut(s)	68
BstACI	GRCGYC	2 cut(s)	308, 441
BstAFI	CTTAAG	1 cut(s)	389
BstBAI	YACGTR	2 cut(s)	1247, 1928
BstC8I	GCNNGC	9 cut(s)	449, 531, 767, 771, 1152, 1507, 1511, 1906, 2156
BstDEI	CTNAG	5 cut(s)	270, 633, 907, 1560, 2009
BstDSI	CCRYGG	4 cut(s)	151, 1822, 2026, 2166
BstF5I	GGATG	9 cut(s)	138, 289, 355, 601, 1309, 1330, 1921, 2021, 2146
BstFNI	CGCG	3 cut(s)	80, 153, 558
BstH2I	RGCGCY	2 cut(s)	311, 914
BstHHI	GCGC	7 cut(s)	82, 310, 558, 913, 1505, 1525, 2245
BstKTI	GATC	4 cut(s)	502, 682, 1209, 2041
BstMAI	GTCTC	2 cut(s)	65, 1075
BstMBI	GATC	4 cut(s)	499, 679, 1206, 2038
BstMCI	CGRYCG	1 cut(s)	234
BstNI	CCWGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
BstNSI	RCATGY	5 cut(s)	556, 773, 845, 1154, 1509
BstSCI	CCNGG	6 cut(s)	646, 714, 1286, 1379, 1935, 2194
BstSFI	CTRYAG	1 cut(s)	469
BstSLI	GKGCMC	1 cut(s)	1822
BstUI	CGCG	3 cut(s)	80, 153, 558
BstV1I	GCAGC	4 cut(s)	17, 175, 340, 599
BstX2I	RGATCY	1 cut(s)	2038
BstYI	RGATCY	1 cut(s)	2038
BstZI	CGGCCG	1 cut(s)	231
Bsu15I	ATCGAT	1 cut(s)	818
Bsu36I	CCTNAGG	1 cut(s)	633
BsuRI	GGCC	7 cut(s)	233, 381, 477, 651, 864, 1465, 1935
BsuTUI	ATCGAT	1 cut(s)	818
BtgI	CCRYGG	4 cut(s)	151, 1822, 2026, 2166
BtrI	CACGTC	1 cut(s)	361
BtsCI	GGATG	9 cut(s)	138, 289, 355, 601, 1309, 1330, 1921, 2021, 2146
BtsI	GCAGTG	2 cut(s)	478, 1664
BtsIMutI	CAGTG	2 cut(s)	478, 1664
Cac8I	GCNNGC	9 cut(s)	449, 531, 767, 771, 1152, 1507, 1511, 1906, 2156
CaiI	CAGNNNCTG	1 cut(s)	2136
CfoI	GCGC	7 cut(s)	82, 310, 558, 913, 1505, 1525, 2245
Cfr10I	RCCGGY	1 cut(s)	310
Cfr13I	GGNCC	1 cut(s)	1463
Cfr42I	CCGCGG	1 cut(s)	154
ClaI	ATCGAT	1 cut(s)	818
CseI	GACGC	5 cut(s)	40, 248, 1049, 1098, 2142
CsiI	ACCWGGT	1 cut(s)	714
Csp6I	GTAC	4 cut(s)	199, 719, 1795, 2326
CviQI	GTAC	4 cut(s)	199, 719, 1795, 2326
DdeI	CTNAG	5 cut(s)	270, 633, 907, 1560, 2009
DinI	GGCGCC	1 cut(s)	309
DpnI	GATC	4 cut(s)	501, 681, 1208, 2040
DpnII	GATC	4 cut(s)	499, 679, 1206, 2038
EaeI	YGGCCR	3 cut(s)	231, 379, 649
EagI	CGGCCG	1 cut(s)	231
Eam1104I	CTCTTC	1 cut(s)	68
EarI	CTCTTC	1 cut(s)	68
EciI	GGCGGA	1 cut(s)	103
Ecl136II	GAGCTC	1 cut(s)	829
EclXI	CGGCCG	1 cut(s)	231
Eco130I	CCWWGG	5 cut(s)	1516, 1822, 1974, 2026, 2166
Eco147I	AGGCCT	1 cut(s)	864
Eco24I	GRGCYC	2 cut(s)	453, 831
Eco31I	GGTCTC	1 cut(s)	1075
Eco32I	GATATC	1 cut(s)	1234
Eco47III	AGCGCT	1 cut(s)	912
Eco52I	CGGCCG	1 cut(s)	231
Eco53kI	GAGCTC	1 cut(s)	829
Eco57I	CTGAAG	2 cut(s)	491, 560
Eco72I	CACGTG	1 cut(s)	1928
Eco81I	CCTNAGG	1 cut(s)	633
EcoICRI	GAGCTC	1 cut(s)	829
EcoO109I	RGGNCCY	1 cut(s)	1463
EcoRI	GAATTC	2 cut(s)	1291, 1330
EcoRII	CCWGG	6 cut(s)	646, 714, 1286, 1379, 1935, 2194
EcoRV	GATATC	1 cut(s)	1234
EcoT14I	CCWWGG	5 cut(s)	1516, 1822, 1974, 2026, 2166
EcoT22I	ATGCAT	3 cut(s)	1548, 1722, 2021
EcoT38I	GRGCYC	2 cut(s)	453, 831
EgeI	GGCGCC	1 cut(s)	309
EheI	GGCGCC	1 cut(s)	309
ErhI	CCWWGG	5 cut(s)	1516, 1822, 1974, 2026, 2166
Esp3I	CGTCTC	1 cut(s)	65
FaqI	GGGAC	2 cut(s)	38, 2176
FauNDI	CATATG	1 cut(s)	1212
FbaI	TGATCA	1 cut(s)	499
FblI	GTMKAC	1 cut(s)	297
FokI	GGATG	9 cut(s)	125, 296, 362, 608, 1316, 1337, 1928, 2028, 2153
FriOI	GRGCYC	2 cut(s)	453, 831
FspBI	CTAG	4 cut(s)	774, 791, 1517, 2042
GlaI	GCGC	7 cut(s)	81, 309, 557, 912, 1504, 1524, 2244
GsaI	CCCAGC	2 cut(s)	1416, 2140
GsuI	CTGGAG	2 cut(s)	1402, 1764
HaeII	RGCGCY	2 cut(s)	311, 914
HaeIII	GGCC	7 cut(s)	233, 381, 477, 651, 864, 1465, 1935
HapII	CCGG	3 cut(s)	311, 1076, 1361
HgaI	GACGC	5 cut(s)	40, 248, 1049, 1098, 2142
HhaI	GCGC	7 cut(s)	82, 310, 558, 913, 1505, 1525, 2245
Hin1I	GRCGYC	2 cut(s)	308, 441
Hin6I	GCGC	7 cut(s)	80, 308, 556, 911, 1503, 1523, 2243
HinP1I	GCGC	7 cut(s)	80, 308, 556, 911, 1503, 1523, 2243
HincII	GTYRAC	3 cut(s)	298, 439, 885
HindII	GTYRAC	3 cut(s)	298, 439, 885
HindIII	AAGCTT	2 cut(s)	1842, 2063
HinfI	GANTC	6 cut(s)	183, 416, 1027, 1178, 1263, 2264
HpaII	CCGG	3 cut(s)	311, 1076, 1361
HphI	GGTGA	8 cut(s)	58, 162, 325, 494, 959, 1501, 1552, 2194
Hpy166II	GTNNAC	6 cut(s)	298, 439, 885, 1664, 1871, 2302
Hpy188I	TCNGA	8 cut(s)	271, 540, 595, 673, 1183, 1678, 2057, 2132
Hpy188III	TCNNGA	8 cut(s)	497, 509, 1076, 1229, 1771, 1781, 2261, 2336
Hpy8I	GTNNAC	6 cut(s)	298, 439, 885, 1664, 1871, 2302
Hpy99I	CGWCG	6 cut(s)	239, 242, 302, 362, 446, 1052
HpyAV	CCTTC	5 cut(s)	223, 515, 1531, 1831, 2237
HpyCH4III	ACNGT	2 cut(s)	744, 994
HpyCH4IV	ACGT	5 cut(s)	360, 441, 1246, 1793, 1927
HpyF3I	CTNAG	5 cut(s)	270, 633, 907, 1560, 2009
HpySE526I	ACGT	5 cut(s)	360, 441, 1246, 1793, 1927
Hsp92I	GRCGYC	2 cut(s)	308, 441
HspAI	GCGC	7 cut(s)	80, 308, 556, 911, 1503, 1523, 2243
KasI	GGCGCC	1 cut(s)	307
Kpn2I	TCCGGA	1 cut(s)	1075
Ksp22I	TGATCA	1 cut(s)	499
KspI	CCGCGG	1 cut(s)	154
Kzo9I	GATC	4 cut(s)	499, 679, 1206, 2038
LmnI	GCTCC	5 cut(s)	855, 1037, 1363, 1783, 1978
Lsp1109I	GCAGC	4 cut(s)	17, 175, 340, 599
MabI	ACCWGGT	1 cut(s)	714
MaeI	CTAG	4 cut(s)	774, 791, 1517, 2042
MaeII	ACGT	5 cut(s)	360, 441, 1246, 1793, 1927
MaeIII	GTNAC	2 cut(s)	1004, 1480
MalI	GATC	4 cut(s)	501, 681, 1208, 2040
MboI	GATC	4 cut(s)	499, 679, 1206, 2038
MboII	GAAGA	6 cut(s)	55, 198, 258, 349, 352, 2197
MflI	RGATCY	1 cut(s)	2038
MhlI	GDGCHC	5 cut(s)	366, 453, 831, 1822, 2005
MlsI	TGGCCA	1 cut(s)	651
MluNI	TGGCCA	1 cut(s)	651
Mly113I	GGCGCC	1 cut(s)	308
MlyI	GAGTC	1 cut(s)	1187
MmeI	TCCRAC	5 cut(s)	942, 1035, 1281, 1756, 2035
Mox20I	TGGCCA	1 cut(s)	651
Mph1103I	ATGCAT	3 cut(s)	1548, 1722, 2021
MroI	TCCGGA	1 cut(s)	1075
MscI	TGGCCA	1 cut(s)	651
MseI	TTAA	5 cut(s)	390, 1085, 1407, 1577, 2310
MslI	CAYNNNNRTG	4 cut(s)	609, 1215, 1518, 1888
Msp20I	TGGCCA	1 cut(s)	651
MspA1I	CMGCKG	1 cut(s)	153
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	3 cut(s)	311, 1076, 1361
MspR9I	CCNGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
Mva1269I	GAATGC	3 cut(s)	144, 582, 1699
MvaI	CCWGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
MvnI	CGCG	3 cut(s)	80, 153, 558
NarI	GGCGCC	1 cut(s)	308
NcoI	CCATGG	3 cut(s)	1822, 2026, 2166
NdeI	CATATG	1 cut(s)	1212
NdeII	GATC	4 cut(s)	499, 679, 1206, 2038
NlaIV	GGNNCC	5 cut(s)	309, 640, 1464, 1980, 2224
NmeAIII	GCCGAG	3 cut(s)	209, 407, 570
NsiI	ATGCAT	3 cut(s)	1548, 1722, 2021
NspI	RCATGY	5 cut(s)	556, 773, 845, 1154, 1509
OliI	CACNNNNGTG	2 cut(s)	1518, 1888
PaeI	GCATGC	3 cut(s)	773, 1154, 1509
PceI	AGGCCT	1 cut(s)	864
PcsI	WCGNNNNNNNCGW	1 cut(s)	450
PctI	GAATGC	3 cut(s)	144, 582, 1699
PfeI	GAWTC	5 cut(s)	183, 416, 1027, 1263, 2264
PflMI	CCANNNNNTGG	1 cut(s)	1942
PfoI	TCCNGGA	2 cut(s)	1286, 1379
PleI	GAGTC	1 cut(s)	1186
PluTI	GGCGCC	1 cut(s)	311
PmaCI	CACGTG	1 cut(s)	1928
PmlI	CACGTG	1 cut(s)	1928
PpsI	GAGTC	1 cut(s)	1186
Ppu21I	YACGTR	2 cut(s)	1247, 1928
Psp124BI	GAGCTC	1 cut(s)	831
Psp6I	CCWGG	6 cut(s)	646, 714, 1286, 1379, 1935, 2194
PspCI	CACGTG	1 cut(s)	1928
PspFI	CCCAGC	2 cut(s)	1412, 2136
PspGI	CCWGG	6 cut(s)	646, 714, 1286, 1379, 1935, 2194
PspN4I	GGNNCC	5 cut(s)	309, 640, 1464, 1980, 2224
PspPI	GGNCC	1 cut(s)	1463
PstI	CTGCAG	1 cut(s)	473
PstNI	CAGNNNCTG	1 cut(s)	2136
PsuI	RGATCY	1 cut(s)	2038
RsaI	GTAC	4 cut(s)	200, 720, 1796, 2327
RsaNI	GTAC	4 cut(s)	199, 719, 1795, 2326
RseI	CAYNNNNRTG	4 cut(s)	609, 1215, 1518, 1888
SacI	GAGCTC	1 cut(s)	831
SacII	CCGCGG	1 cut(s)	154
SalI	GTCGAC	1 cut(s)	296
SaqAI	TTAA	5 cut(s)	390, 1085, 1407, 1577, 2310
Sau3AI	GATC	4 cut(s)	499, 679, 1206, 2038
Sau96I	GGNCC	1 cut(s)	1463
SchI	GAGTC	1 cut(s)	1187
ScrFI	CCNGG	6 cut(s)	648, 716, 1288, 1381, 1937, 2196
SduI	GDGCHC	5 cut(s)	366, 453, 831, 1822, 2005
SexAI	ACCWGGT	1 cut(s)	714
SfcI	CTRYAG	1 cut(s)	469
SfoI	GGCGCC	1 cut(s)	309
Sfr303I	CCGCGG	1 cut(s)	154
SgrAI	CRCCGGYG	1 cut(s)	310
SgrBI	CCGCGG	1 cut(s)	154
SmiMI	CAYNNNNRTG	4 cut(s)	609, 1215, 1518, 1888
SmlI	CTYRAG	2 cut(s)	389, 830
SmoI	CTYRAG	2 cut(s)	389, 830
SphI	GCATGC	3 cut(s)	773, 1154, 1509
SseBI	AGGCCT	1 cut(s)	864
SspDI	GGCGCC	1 cut(s)	307
SspMI	CTAG	4 cut(s)	774, 791, 1517, 2042
SstI	GAGCTC	1 cut(s)	831
StuI	AGGCCT	1 cut(s)	864
StyD4I	CCNGG	6 cut(s)	646, 714, 1286, 1379, 1935, 2194
StyI	CCWWGG	5 cut(s)	1516, 1822, 1974, 2026, 2166
TaaI	ACNGT	2 cut(s)	744, 994
TaiI	ACGT	5 cut(s)	363, 444, 1249, 1796, 1930
TatI	WGTACW	1 cut(s)	2325
TauI	GCSGC	6 cut(s)	153, 227, 257, 290, 308, 631
TfiI	GAWTC	5 cut(s)	183, 416, 1027, 1263, 2264
Tru1I	TTAA	5 cut(s)	390, 1085, 1407, 1577, 2310
Tru9I	TTAA	5 cut(s)	390, 1085, 1407, 1577, 2310
TscAI	CASTG	2 cut(s)	478, 1671
TseI	GCWGC	5 cut(s)	5, 30, 188, 353, 587
TspDTI	ATGAA	6 cut(s)	345, 819, 1180, 1581, 2036, 2339
TspGWI	ACGGA	1 cut(s)	715
TspRI	CASTG	2 cut(s)	478, 1671
Van91I	CCANNNNNTGG	1 cut(s)	1942
Vha464I	CTTAAG	1 cut(s)	389
XapI	RAATTY	6 cut(s)	1291, 1330, 1746, 2234, 2274, 2290
XceI	RCATGY	5 cut(s)	556, 773, 845, 1154, 1509
XmaJI	CCTAGG	1 cut(s)	1516
XmiI	GTMKAC	1 cut(s)	297
XspI	CTAG	4 cut(s)	774, 791, 1517, 2042
ZraI	GACGTC	1 cut(s)	442
Zsp2I	ATGCAT	3 cut(s)	1548, 1722, 2021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.