Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0016589

Physical Location & Seq

Genomic Coordinates Forward (+)

39951691 .. 39953319

Gene Structure 1629 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G027220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGTTGAATGCATCATTTGCCACCAAAAGTCCTATTATACTCCAAACCATAATCACTAACCTTCATGAAAACTGTAAATCAATGTCGGAGCTCAAGCAAATCCATGCTCTGCTCCTCACTTCTGCCCTCCCAACAACAATCCTTTACTTCCGAAATCATCAGTTTCTCAGCTCTATCGGATTCCGTCATCAGAGGCTACTCCAAGAGCAAAAACCCCAACCGTTCGATTTCCGTCTTCATCAAAATGCTGCGCCATGGGCCTCACCGGATTACTTAACGTACCCTTTTCTGGCCAAAGCCTCGGCGCGTTTGTTGAAGCGTGAGCTTGGTGTGGCGGTGCATGGCCACATTGTCAAAGCTGGGTTTGAGTCGGATAGGTTTATAAGTAACTCCTTGATTCATATGTACGCTACATGTAGGGATATAGTGTATGCACGTAAGGTGTTCGATGAAATTCCTGTGAGGAACTCGGTTTCTTGGAATTCCATGCTGGATGGATATGCAAAGTGTGGGGATGTGGTTTCAGCTAGGGAGGTGTTTGAGATGATGCCGGAGCGTGATGTTGTGTCTTGGAGCTCTTTGATTGATGGGTACGTCAAGGATGGGGAGTATGGGGAGGCTTTGAAAGTGTTCGAGAGAATGCGGGTTATGGGGCCGAAAGCGAATGAGGTGACTATGGTGAGTGTTTTGTGTGCGTGTGCGCATCTAGGTGCGCTTGAGCAAGGGAAGACAATGCATTGTTATATGATGGAGAATAAGTTGCCGTTAACTTTGGTGTTGCGAACAGCACTTGTGGACATGTATGCAAAGTGTGGGGCGATAGGCGAGGCTTTACATGTTTTTCGTGGGGTTTCGTTGCAGCAGTCGGATGTGTTGATTTGGAATGCAATGATCGGAGGACTTGCAACTCATGGATTAGTCCAACAGTCACTTGAATATTTTAGGGAGATGCAAATGATTCGGATTGTCCCGGATGAGATCACATACTTGTGCTTGTTGAGTGCTTGCGCTCATGGGGGCTTAGTCAAAGAAGCTTGGTCTTTCTTTGAATGTATTGGTAAACGTGGTATGACGCCCAAGTCTGAGCACTATGCTTGCATGGTGGATGTATTAGCACGTAGAGGCGAAGTAGAAGAGGCATACCGGTTTATATGTCGAATGCCTAGTGATCCAACTCCTTCCATGCTAGGTGCTCTGCTTAATGGGTGCACGAACCACGGAAAATTAGGTCTTGCAGAGGTTGTTGGGAGGAGGCTTATCGAGATACAGCCAAATCACGATGGTAGATATGTCGGCTTGTCAAATGTTTATGCTGTTTCCAAGCGCTGGGATGATGCAAGAAGTCTAAGAAAAGCCATGGAAAGGAGAGGGGTGAAGAAGTCCCCTGGGTTTAGTGTTGTGGAGATATTTGGAACCCTTCACAAATTTATAGCCCACGATAAATCATGCCCTGATTTGGAAGAAATTTATGGGATGCTGAATGTTATTGTAAATGAAATTAGATCTGATACTGATAACAGAGATCAAGAATTCTATTTTTATGCAGTGGAAAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

519

Amino Acids

58.61

Weight (kDa)

7.58

Isoelectric Point (pI)

49.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	155 - 187	3.8e-06	PPR repeat family
PPR	PF01535	158 - 187	3.7e-08	PPR repeat
PPR_2	PF13041	186 - 235	3.1e-10	PPR repeat family
PPR_1	PF12854	186 - 215	2.8e-06	PPR repeat
PPR	PF01535	189 - 218	1.7e-08	PPR repeat
PPR_2	PF13041	290 - 338	9.3e-09	PPR repeat family
E_motif	PF20431	408 - 468	1.3e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08305
fragaria_vesca	FvH4_3g24460
pyrus_communis	pycom03g09570
rosa_chinensis	RchiOBHm_Chr5g0043961
rosa_laevigata	RLG00000034228
rosa_multiflora	Rmu_co8265095.1_g000001 Rmu_sc0002988.1_g000009 Rmu_sc0006669.1_g000009
rosa_roxburghii	Rroxscaffold_1G00037100
rosa_rugosa	Rorug05G0209400
rosa_samantha	Rh5AG293800 Rh5BG302000 Rh5CG329200
rosa_wichuraiana	Rw5G027220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	383
AasI	GACNNNNNNGTC	1 cut(s)	1078
Acc16I	TGCGCA	1 cut(s)	702
AccB7I	CCANNNNNTGG	1 cut(s)	1326
AccII	CGCG	1 cut(s)	307
AciI	CCGC	2 cut(s)	335, 643
AclWI	GGATC	1 cut(s)	1163
AcoI	YGGCCR	2 cut(s)	291, 343
AcsI	RAATTY	6 cut(s)	453, 481, 1424, 1464, 1529, 1552
AcyI	GRCGYC	1 cut(s)	1073
AfaI	GTAC	3 cut(s)	281, 407, 593
AfeI	AGCGCT	1 cut(s)	1325
AfiI	CCNNNNNNNGG	4 cut(s)	289, 1326, 1362, 1456
AflIII	ACRYGT	3 cut(s)	413, 798, 835
AgeI	ACCGGT	1 cut(s)	1143
AgsI	TTSAA	5 cut(s)	7, 316, 625, 935, 1049
AjnI	CCWGG	1 cut(s)	1384
AluBI	AGCT	7 cut(s)	91, 171, 325, 359, 527, 576, 1034
AluI	AGCT	7 cut(s)	91, 171, 325, 359, 527, 576, 1034
Alw21I	GWGCWC	5 cut(s)	93, 578, 1089, 1195, 1211
Alw44I	GTGCAC	1 cut(s)	1207
AlwI	GGATC	1 cut(s)	1163
Aor51HI	AGCGCT	1 cut(s)	1325
AoxI	GGCC	4 cut(s)	258, 291, 343, 653
ApaLI	GTGCAC	1 cut(s)	1207
ApeKI	GCWGC	2 cut(s)	248, 859
ApoI	RAATTY	6 cut(s)	453, 481, 1424, 1464, 1529, 1552
AsiGI	ACCGGT	1 cut(s)	1143
Asp700I	GAANNNNTTC	1 cut(s)	629
AspLEI	GCGC	6 cut(s)	253, 307, 703, 715, 1010, 1326
AspS9I	GGNCC	2 cut(s)	258, 653
AsuC2I	CCSGG	1 cut(s)	971
AsuHPI	GGTGA	4 cut(s)	255, 682, 691, 1384
BaeGI	GKGCMC	1 cut(s)	1211
BalI	TGGCCA	2 cut(s)	293, 345
BanII	GRGCYC	2 cut(s)	93, 578
BbsI	GAAGAC	2 cut(s)	227, 734
Bbv12I	GWGCWC	5 cut(s)	93, 578, 1089, 1195, 1211
BbvI	GCAGC	2 cut(s)	235, 871
BccI	CCATC	5 cut(s)	488, 581, 596, 742, 1274
BceAI	ACGGC	1 cut(s)	748
BcgI	CGANNNNNNTGC	2 cut(s)	941, 975
BciT130I	CCWGG	1 cut(s)	1386
BcnI	CCSGG	1 cut(s)	971
BfaI	CTAG	4 cut(s)	528, 707, 1164, 1187
BfoI	RGCGCY	1 cut(s)	1327
BglII	AGATCT	1 cut(s)	1502
BisI	GCNGC	2 cut(s)	249, 860
BlsI	GCNGC	2 cut(s)	250, 861
Bme1390I	CCNGG	2 cut(s)	971, 1386
BmgT120I	GGNCC	2 cut(s)	258, 653
BmiI	GGNNCC	2 cut(s)	654, 1414
BmrFI	CCNGG	2 cut(s)	971, 1386
BmsI	GCATC	6 cut(s)	20, 537, 712, 939, 1324, 1464
BpiI	GAAGAC	2 cut(s)	227, 734
BpuEI	CTTGAG	2 cut(s)	77, 737
BpuMI	CCSGG	1 cut(s)	971
BsaAI	YACGTR	2 cut(s)	437, 1118
BsaHI	GRCGYC	1 cut(s)	1073
BsaJI	CCNNGG	6 cut(s)	254, 300, 1216, 1356, 1384, 1385
BsaWI	WCCGGW	2 cut(s)	265, 1143
BsaXI	ACNNNNNCTCC	2 cut(s)	743, 773
Bsc4I	CCNNNNNNNGG	4 cut(s)	289, 1326, 1362, 1456
Bse118I	RCCGGY	1 cut(s)	1143
Bse3DI	GCAATG	1 cut(s)	894
BseBI	CCWGG	1 cut(s)	1386
BseDI	CCNNGG	6 cut(s)	254, 300, 1216, 1356, 1384, 1385
BseGI	GGATG	8 cut(s)	499, 520, 607, 874, 979, 1111, 1336, 1479
BseLI	CCNNNNNNNGG	4 cut(s)	289, 1326, 1362, 1456
BseMI	GCAATG	1 cut(s)	894
BseMII	CTCAG	2 cut(s)	181, 1074
BseRI	GAGGAG	2 cut(s)	104, 1264
BseSI	GKGCMC	1 cut(s)	1211
BseXI	GCAGC	2 cut(s)	235, 871
BseYI	CCCAGC	2 cut(s)	359, 1326
Bsh1236I	CGCG	1 cut(s)	307
BshFI	GGCC	4 cut(s)	260, 293, 345, 655
BshTI	ACCGGT	1 cut(s)	1143
BsiHKAI	GWGCWC	5 cut(s)	93, 578, 1089, 1195, 1211
BsiSI	CCGG	4 cut(s)	266, 551, 971, 1144
BslFI	GGGAC	2 cut(s)	953, 1366
BslI	CCNNNNNNNGG	4 cut(s)	289, 1326, 1362, 1456
BsmFI	GGGAC	2 cut(s)	953, 1366
BsmI	GAATGC	4 cut(s)	13, 645, 889, 1164
BsnI	GGCC	4 cut(s)	260, 293, 345, 655
Bsp1286I	GDGCHC	5 cut(s)	93, 578, 1089, 1195, 1211
Bsp143I	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
Bsp19I	CCATGG	2 cut(s)	254, 1356
BspACI	CCGC	2 cut(s)	335, 643
BspANI	GGCC	4 cut(s)	260, 293, 345, 655
BspCNI	CTCAG	2 cut(s)	180, 1075
BspFNI	CGCG	1 cut(s)	307
BspHI	TCATGA	1 cut(s)	64
BspLI	GGNNCC	2 cut(s)	654, 1414
BspPI	GGATC	1 cut(s)	1163
BsrDI	GCAATG	1 cut(s)	894
BsrFI	RCCGGY	1 cut(s)	1143
BssAI	RCCGGY	1 cut(s)	1143
BssECI	CCNNGG	6 cut(s)	254, 300, 1216, 1356, 1384, 1385
BssMI	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
BssNI	GRCGYC	1 cut(s)	1073
BssT1I	CCWWGG	2 cut(s)	254, 1356
Bst2UI	CCWGG	1 cut(s)	1386
Bst4CI	ACNGT	3 cut(s)	74, 222, 927
Bst6I	CTCTTC	1 cut(s)	1128
BstACI	GRCGYC	1 cut(s)	1073
BstAPI	GCANNNNNTGC	1 cut(s)	17
BstBAI	YACGTR	2 cut(s)	437, 1118
BstC8I	GCNNGC	2 cut(s)	1006, 1096
BstDEI	CTNAG	4 cut(s)	167, 1021, 1083, 1346
BstDSI	CCRYGG	3 cut(s)	254, 1216, 1356
BstF5I	GGATG	8 cut(s)	499, 520, 607, 874, 979, 1111, 1336, 1479
BstFNI	CGCG	1 cut(s)	307
BstH2I	RGCGCY	1 cut(s)	1327
BstHHI	GCGC	6 cut(s)	253, 307, 703, 715, 1010, 1326
BstKTI	GATC	5 cut(s)	894, 981, 1171, 1505, 1525
BstMBI	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
BstMWI	GCNNNNNNNGC	2 cut(s)	17, 257
BstNI	CCWGG	1 cut(s)	1386
BstNSI	RCATGY	3 cut(s)	417, 802, 839
BstSCI	CCNGG	2 cut(s)	969, 1384
BstSLI	GKGCMC	1 cut(s)	1211
BstUI	CGCG	1 cut(s)	307
BstV1I	GCAGC	2 cut(s)	235, 871
BstV2I	GAAGAC	2 cut(s)	227, 734
BstX2I	RGATCY	1 cut(s)	1502
BstYI	RGATCY	1 cut(s)	1502
BsuRI	GGCC	4 cut(s)	260, 293, 345, 655
BtgI	CCRYGG	3 cut(s)	254, 1216, 1356
BtsCI	GGATG	8 cut(s)	499, 520, 607, 874, 979, 1111, 1336, 1479
BtsI	GCAGTG	1 cut(s)	1551
BtsIMutI	CAGTG	1 cut(s)	1551
Cac8I	GCNNGC	2 cut(s)	1006, 1096
CciI	TCATGA	1 cut(s)	64
CfoI	GCGC	6 cut(s)	253, 307, 703, 715, 1010, 1326
Cfr10I	RCCGGY	1 cut(s)	1143
Cfr13I	GGNCC	2 cut(s)	258, 653
CseI	GACGC	1 cut(s)	1081
Csp6I	GTAC	3 cut(s)	280, 406, 592
CspAI	ACCGGT	1 cut(s)	1143
CviQI	GTAC	3 cut(s)	280, 406, 592
DdeI	CTNAG	4 cut(s)	167, 1021, 1083, 1346
DpnI	GATC	5 cut(s)	893, 980, 1170, 1504, 1524
DpnII	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
DrdI	GACNNNNNNGTC	1 cut(s)	1078
DseDI	GACNNNNNNGTC	1 cut(s)	1078
EaeI	YGGCCR	2 cut(s)	291, 343
Eam1104I	CTCTTC	1 cut(s)	1128
EarI	CTCTTC	1 cut(s)	1128
Ecl136II	GAGCTC	2 cut(s)	91, 576
Eco130I	CCWWGG	2 cut(s)	254, 1356
Eco24I	GRGCYC	2 cut(s)	93, 578
Eco47III	AGCGCT	1 cut(s)	1325
Eco53kI	GAGCTC	2 cut(s)	91, 576
EcoICRI	GAGCTC	2 cut(s)	91, 576
EcoRI	GAATTC	2 cut(s)	481, 1529
EcoRII	CCWGG	1 cut(s)	1384
EcoT14I	CCWWGG	2 cut(s)	254, 1356
EcoT22I	ATGCAT	2 cut(s)	13, 738
EcoT38I	GRGCYC	2 cut(s)	93, 578
ErhI	CCWWGG	2 cut(s)	254, 1356
FaqI	GGGAC	2 cut(s)	953, 1366
FauI	CCCGC	1 cut(s)	636
FauNDI	CATATG	1 cut(s)	402
Fnu4HI	GCNGC	2 cut(s)	249, 860
FokI	GGATG	8 cut(s)	506, 527, 614, 881, 986, 1118, 1343, 1486
FriOI	GRGCYC	2 cut(s)	93, 578
Fsp4HI	GCNGC	2 cut(s)	249, 860
FspAI	RTGCGCAY	1 cut(s)	702
FspBI	CTAG	4 cut(s)	528, 707, 1164, 1187
FspI	TGCGCA	1 cut(s)	702
GlaI	GCGC	6 cut(s)	252, 306, 702, 714, 1009, 1325
GluI	GCNGC	2 cut(s)	249, 860
GsaI	CCCAGC	2 cut(s)	363, 1330
HaeII	RGCGCY	1 cut(s)	1327
HaeIII	GGCC	4 cut(s)	260, 293, 345, 655
HapII	CCGG	4 cut(s)	266, 551, 971, 1144
HgaI	GACGC	1 cut(s)	1081
HhaI	GCGC	6 cut(s)	253, 307, 703, 715, 1010, 1326
Hin1I	GRCGYC	1 cut(s)	1073
Hin6I	GCGC	6 cut(s)	251, 305, 701, 713, 1008, 1324
HinP1I	GCGC	6 cut(s)	251, 305, 701, 713, 1008, 1324
HincII	GTYRAC	1 cut(s)	768
HindII	GTYRAC	1 cut(s)	768
HindIII	AAGCTT	1 cut(s)	1032
HinfI	GANTC	4 cut(s)	180, 368, 397, 958
HpaI	GTTAAC	1 cut(s)	768
HpaII	CCGG	4 cut(s)	266, 551, 971, 1144
HphI	GGTGA	4 cut(s)	255, 682, 691, 1384
Hpy166II	GTNNAC	4 cut(s)	768, 796, 1061, 1209
Hpy188III	TCNNGA	5 cut(s)	65, 634, 1261, 1277, 1526
Hpy8I	GTNNAC	4 cut(s)	768, 796, 1061, 1209
HpyAV	CCTTC	3 cut(s)	71, 1188, 1427
HpyCH4III	ACNGT	3 cut(s)	74, 222, 927
HpyCH4IV	ACGT	5 cut(s)	278, 436, 594, 1063, 1117
HpyF10VI	GCNNNNNNNGC	2 cut(s)	17, 257
HpyF3I	CTNAG	4 cut(s)	167, 1021, 1083, 1346
HpySE526I	ACGT	5 cut(s)	278, 436, 594, 1063, 1117
Hsp92I	GRCGYC	1 cut(s)	1073
HspAI	GCGC	6 cut(s)	251, 305, 701, 713, 1008, 1324
KspAI	GTTAAC	1 cut(s)	768
Kzo9I	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
LmnI	GCTCC	4 cut(s)	88, 117, 553, 573
Lsp1109I	GCAGC	2 cut(s)	235, 871
LweI	GCATC	6 cut(s)	20, 537, 712, 939, 1324, 1464
MaeI	CTAG	4 cut(s)	528, 707, 1164, 1187
MaeII	ACGT	5 cut(s)	278, 436, 594, 1063, 1117
MaeIII	GTNAC	3 cut(s)	386, 670, 927
MalI	GATC	5 cut(s)	893, 980, 1170, 1504, 1524
MboI	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
MboII	GAAGA	5 cut(s)	227, 739, 1145, 1387, 1472
MflI	RGATCY	1 cut(s)	1502
MhlI	GDGCHC	5 cut(s)	93, 578, 1089, 1195, 1211
MlsI	TGGCCA	2 cut(s)	293, 345
MluCI	AATT	8 cut(s)	453, 481, 1223, 1424, 1464, 1497, 1529, 1552
MluNI	TGGCCA	2 cut(s)	293, 345
MlyI	GAGTC	1 cut(s)	377
MmeI	TCCRAC	5 cut(s)	66, 351, 846, 946, 1196
Mox20I	TGGCCA	2 cut(s)	293, 345
Mph1103I	ATGCAT	2 cut(s)	13, 738
MroXI	GAANNNNTTC	1 cut(s)	629
MscI	TGGCCA	2 cut(s)	293, 345
MseI	TTAA	3 cut(s)	275, 767, 1200
MslI	CAYNNNNRTG	3 cut(s)	243, 708, 988
Msp20I	TGGCCA	2 cut(s)	293, 345
MspI	CCGG	4 cut(s)	266, 551, 971, 1144
MspR9I	CCNGG	2 cut(s)	971, 1386
Mva1269I	GAATGC	4 cut(s)	13, 645, 889, 1164
MvaI	CCWGG	1 cut(s)	1386
MvnI	CGCG	1 cut(s)	307
MwoI	GCNNNNNNNGC	2 cut(s)	17, 257
NciI	CCSGG	1 cut(s)	971
NcoI	CCATGG	2 cut(s)	254, 1356
NdeI	CATATG	1 cut(s)	402
NdeII	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
NlaIV	GGNNCC	2 cut(s)	654, 1414
NmeAIII	GCCGAG	1 cut(s)	281
NmuCI	GTSAC	2 cut(s)	670, 927
NsbI	TGCGCA	1 cut(s)	702
NsiI	ATGCAT	2 cut(s)	13, 738
NspI	RCATGY	3 cut(s)	417, 802, 839
PagI	TCATGA	1 cut(s)	64
PasI	CCCWGGG	1 cut(s)	1385
PciI	ACATGT	3 cut(s)	413, 798, 835
PctI	GAATGC	4 cut(s)	13, 645, 889, 1164
PdmI	GAANNNNTTC	1 cut(s)	629
PfeI	GAWTC	3 cut(s)	180, 397, 958
PflMI	CCANNNNNTGG	1 cut(s)	1326
PfoI	TCCNGGA	1 cut(s)	969
PinAI	ACCGGT	1 cut(s)	1143
PkrI	GCNGC	2 cut(s)	250, 861
PleI	GAGTC	1 cut(s)	376
PpsI	GAGTC	1 cut(s)	376
Ppu21I	YACGTR	2 cut(s)	437, 1118
PscI	ACATGT	3 cut(s)	413, 798, 835
PsiI	TTATAA	1 cut(s)	383
Psp124BI	GAGCTC	2 cut(s)	93, 578
Psp6I	CCWGG	1 cut(s)	1384
PspFI	CCCAGC	2 cut(s)	359, 1326
PspGI	CCWGG	1 cut(s)	1384
PspN4I	GGNNCC	2 cut(s)	654, 1414
PspPI	GGNCC	2 cut(s)	258, 653
PsuI	RGATCY	1 cut(s)	1502
RsaI	GTAC	3 cut(s)	281, 407, 593
RsaNI	GTAC	3 cut(s)	280, 406, 592
RseI	CAYNNNNRTG	3 cut(s)	243, 708, 988
SacI	GAGCTC	2 cut(s)	93, 578
SaqAI	TTAA	3 cut(s)	275, 767, 1200
SatI	GCNGC	2 cut(s)	249, 860
Sau3AI	GATC	5 cut(s)	891, 978, 1168, 1502, 1522
Sau96I	GGNCC	2 cut(s)	258, 653
SchI	GAGTC	1 cut(s)	377
ScrFI	CCNGG	2 cut(s)	971, 1386
SduI	GDGCHC	5 cut(s)	93, 578, 1089, 1195, 1211
SfaNI	GCATC	6 cut(s)	20, 537, 712, 939, 1324, 1464
SmiMI	CAYNNNNRTG	3 cut(s)	243, 708, 988
SmlI	CTYRAG	2 cut(s)	92, 716
SmoI	CTYRAG	2 cut(s)	92, 716
Sse9I	AATT	8 cut(s)	453, 481, 1223, 1424, 1464, 1497, 1529, 1552
SsiI	CCGC	2 cut(s)	335, 643
SspI	AATATT	1 cut(s)	938
SspMI	CTAG	4 cut(s)	528, 707, 1164, 1187
SstI	GAGCTC	2 cut(s)	93, 578
StyD4I	CCNGG	2 cut(s)	969, 1384
StyI	CCWWGG	2 cut(s)	254, 1356
TaaI	ACNGT	3 cut(s)	74, 222, 927
TaiI	ACGT	5 cut(s)	281, 439, 597, 1066, 1120
TaqI	TCGA	5 cut(s)	225, 447, 633, 1156, 1260
TasI	AATT	8 cut(s)	453, 481, 1223, 1424, 1464, 1497, 1529, 1552
TfiI	GAWTC	3 cut(s)	180, 397, 958
Tru1I	TTAA	3 cut(s)	275, 767, 1200
Tru9I	TTAA	3 cut(s)	275, 767, 1200
TscAI	CASTG	1 cut(s)	1551
TseFI	GTSAC	2 cut(s)	670, 927
TseI	GCWGC	2 cut(s)	248, 859
Tsp45I	GTSAC	2 cut(s)	670, 927
TspDTI	ATGAA	6 cut(s)	53, 81, 227, 389, 465, 1509
TspGWI	ACGGA	3 cut(s)	173, 221, 1233
TspRI	CASTG	1 cut(s)	1551
Van91I	CCANNNNNTGG	1 cut(s)	1326
VneI	GTGCAC	1 cut(s)	1207
XapI	RAATTY	6 cut(s)	453, 481, 1424, 1464, 1529, 1552
XceI	RCATGY	3 cut(s)	417, 802, 839
XmnI	GAANNNNTTC	1 cut(s)	629
XspI	CTAG	4 cut(s)	528, 707, 1164, 1187
Zsp2I	ATGCAT	2 cut(s)	13, 738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.