Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0016589

Physical Location & Seq

Genomic Coordinates Forward (+)

38824680 .. 38826534

Gene Structure 1855 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034228

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGTTGAATGCATCATTTCCCACCAAAAGCCCTATCATACTCCAAACCATAATCACTAACCTTCATGAAAACTGCAAATCAATGTCGGAGCTCAAGCAAATCCATGCTCTGCTCCTCACTTCTGGCCTCTCCCAACAGCAATCCTTTACTTCCGAAGTCATCAACTTCTCAGCGCTATCGGATTCCGGTGACATAGACTACTCGTACCGGGTCCTAGCCCAACTACCCACCCCAACAGTTTTTGATTGGAACGCAGTCATCAGAGGCTACTCCAAGAGCAAAAACCCCAACCGTTCGATTTCCGTCTTCATCAAAATGCTGCGTCATGGGGCCTCACCGGATTACTTAACGTACCCTTTTCTGGCAAAAACCTCGGCGCGTTTGTTGAAGCGTGAGCTTGGTGTGGCGGTGCATGGACACATTGTCAAAGCCGGGTTTGAGTCGGACAGGTTTATAAGTAATTCCCTGATTCATATGTACGCTACTTGTAGGGATATAGTGTATGCACGTAAGGTGTTCGATGAAATTCCTGTGAGGAACTCGGTTTCTTGGAATTCGATGCTGGATGGATATGCAAAGTGTGGGGATGTGGTTTCAGCTAGGGAGGTGTTTGAGATGATGCCGGAGCGTGATGTTGTGTCTTGGAGCTCTTTGATTGATGGGTACGTTAAGGATGGCGAGTATGGGGAGGCTTTGAAAGTGTTTGAGAGAATGCGGGTTCTTGGGCCGAAAGCGAATGAGGTGACTATGGTGAGTGTTTTGTGTGCATGTGCGCATCTAGGTGCGCTTGAGCAAGGGAGGACAATGCATTGTTACATGATGGAGAATAAGTTGCCGTTAACTTTGGTGTTGCGAACGGCACTTGTGGACATGTATGCAAAGTGTGGGGCGGTAGACGAGGCTTTACATGTTTTTCGTGGGGTTTCGTTGAAGCAGTCGGATGTGTTGATTTGGAACGCAATGATCGGAGGACTTGCAACTCATGGATTAGTACAACAGTCGCTTGAATATTTTAGGGAGATGCAAATGATTGGGATCGTCCCGGATGAGATCACGTACCTGTGCTTGTTGAGTGCTTGCGCTCATGGGGGCTTGGTCAAAGAAGCTTGGCATTTCTTTCAATGTATTGGTAAACATGGTATGACGCCCAAGTCTGAGCACTATGCTTGCATGGTGGATGTATTAGCACGTAGAGGCGAAGTAGAAGAGGCATACCGGTTTATATGTCGAATGCCTAGTGATCCAACTCCTTCCATGCTAGGTGCTCTGCTTAATGGGTGCACGAACCACGGAAAATTAGGTCTTGCAGAGGTTGTTGGGAGGAGGCTTATCGAGATACAGCCAAATCACGATGGTAGATATGTTGGCCTGTCAAATGTTTATGCTGTTTCTAAGCGCTGGGATGATGCAAGTAGTCTAAGAAAAGCCATGGAAAGGAGAGGGGTGAAGAAGTCCCCTGGGTTTAGTTTTGTGGAGATATTTGGAACCCTTCACAAATTTATAGCCCACGATAAATCATGCCCTGATTCGCAAGAAATTTATGGGATGCTGAATGTTATTCTCAAGAGAACACAGGGCTTCAAACTGTTACCATTTGGGAACTTTATGAGCGAGTCAGATTCAAAGAATATCGATCTGTATCCTTTGGATCTTGTGAAAGAGCACTCCACAAGGGCCGCAAAGCTTCAGTTTGTAAAACAGAAGAGGCACTACAAGATCATGGATCACAATTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

579

Amino Acids

64.91

Weight (kDa)

8.68

Isoelectric Point (pI)

46.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	78 - 121	1.6e-06	PPR repeat family
PPR_2	PF13041	179 - 211	4.3e-06	PPR repeat family
PPR	PF01535	182 - 211	4.2e-08	PPR repeat
PPR_2	PF13041	210 - 259	7.6e-10	PPR repeat family
PPR_1	PF12854	210 - 239	3.2e-06	PPR repeat
PPR	PF01535	213 - 242	2.6e-08	PPR repeat
PPR_2	PF13041	314 - 362	1.3e-09	PPR repeat family
E_motif	PF20431	432 - 492	1.1e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08305
fragaria_vesca	FvH4_3g24460
pyrus_communis	pycom03g09570
rosa_chinensis	RchiOBHm_Chr5g0043961
rosa_laevigata	RLG00000034228
rosa_multiflora	Rmu_co8265095.1_g000001 Rmu_sc0002988.1_g000009 Rmu_sc0006669.1_g000009
rosa_roxburghii	Rroxscaffold_1G00037100
rosa_rugosa	Rorug05G0209400
rosa_samantha	Rh5AG293800 Rh5BG302000 Rh5CG329200
rosa_wichuraiana	Rw5G027220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	455
AasI	GACNNNNNNGTC	1 cut(s)	1150
Acc16I	TGCGCA	1 cut(s)	774
AccI	GTMKAC	1 cut(s)	894
AccII	CGCG	1 cut(s)	379
AciI	CCGC	4 cut(s)	407, 715, 890, 1677
AclWI	GGATC	4 cut(s)	1043, 1235, 1656, 1731
AcsI	RAATTY	4 cut(s)	525, 553, 1496, 1536
AcuI	CTGAAG	1 cut(s)	1670
AcyI	GRCGYC	1 cut(s)	1145
AfaI	GTAC	6 cut(s)	206, 353, 479, 665, 993, 1058
AfeI	AGCGCT	2 cut(s)	174, 1397
AfiI	CCNNNNNNNGG	2 cut(s)	361, 1434
AflIII	ACRYGT	2 cut(s)	870, 907
AgeI	ACCGGT	1 cut(s)	1215
AgsI	TTSAA	8 cut(s)	7, 388, 697, 931, 1007, 1121, 1582, 1623
AhdI	GACNNNNNGTC	1 cut(s)	422
AjnI	CCWGG	1 cut(s)	1456
AluBI	AGCT	6 cut(s)	91, 397, 599, 648, 1106, 1684
AluI	AGCT	6 cut(s)	91, 397, 599, 648, 1106, 1684
Alw21I	GWGCWC	6 cut(s)	93, 650, 1161, 1267, 1283, 1665
Alw44I	GTGCAC	1 cut(s)	1279
AlwI	GGATC	4 cut(s)	1043, 1235, 1656, 1731
Aor51HI	AGCGCT	2 cut(s)	174, 1397
AoxI	GGCC	5 cut(s)	124, 330, 725, 1366, 1674
ApaLI	GTGCAC	1 cut(s)	1279
ApeKI	GCWGC	1 cut(s)	319
ApoI	RAATTY	4 cut(s)	525, 553, 1496, 1536
AsiGI	ACCGGT	1 cut(s)	1215
AspLEI	GCGC	6 cut(s)	175, 379, 775, 787, 1082, 1398
AspS9I	GGNCC	4 cut(s)	211, 330, 725, 1674
AsuC2I	CCSGG	3 cut(s)	209, 433, 1043
AsuHPI	GGTGA	5 cut(s)	200, 327, 754, 763, 1456
AvaII	GGWCC	1 cut(s)	211
BaeGI	GKGCMC	1 cut(s)	1283
BanII	GRGCYC	2 cut(s)	93, 650
BarI	GAAGNNNNNNTAC	2 cut(s)	1694, 1726
BbsI	GAAGAC	1 cut(s)	298
Bbv12I	GWGCWC	6 cut(s)	93, 650, 1161, 1267, 1283, 1665
BbvI	GCAGC	1 cut(s)	306
BccI	CCATC	5 cut(s)	560, 653, 668, 814, 1346
BceAI	ACGGC	2 cut(s)	820, 873
BcgI	CGANNNNNNTGC	2 cut(s)	354, 388
BciT130I	CCWGG	1 cut(s)	1458
BciVI	GTATCC	1 cut(s)	1650
BcnI	CCSGG	3 cut(s)	209, 433, 1043
BfaI	CTAG	5 cut(s)	215, 600, 779, 1236, 1259
BfoI	RGCGCY	2 cut(s)	176, 1399
BfuI	GTATCC	1 cut(s)	1650
BisI	GCNGC	2 cut(s)	320, 1677
BlsI	GCNGC	2 cut(s)	321, 1678
Bme1390I	CCNGG	4 cut(s)	209, 433, 1043, 1458
Bme18I	GGWCC	1 cut(s)	211
BmeRI	GACNNNNNGTC	1 cut(s)	422
BmgT120I	GGNCC	4 cut(s)	211, 330, 725, 1674
BmiI	GGNNCC	3 cut(s)	212, 331, 1486
BmrFI	CCNGG	4 cut(s)	209, 433, 1043, 1458
BmsI	GCATC	7 cut(s)	20, 549, 609, 784, 1011, 1396, 1536
BpiI	GAAGAC	1 cut(s)	298
BpuEI	CTTGAG	3 cut(s)	77, 809, 1547
BpuMI	CCSGG	3 cut(s)	209, 433, 1043
Bsa29I	ATCGAT	1 cut(s)	1632
BsaAI	YACGTR	3 cut(s)	509, 1056, 1190
BsaBI	GATNNNNATC	2 cut(s)	1034, 1638
BsaHI	GRCGYC	1 cut(s)	1145
BsaJI	CCNNGG	5 cut(s)	372, 1288, 1428, 1456, 1457
BsaWI	WCCGGW	3 cut(s)	185, 337, 1215
BsaXI	ACNNNNNCTCC	2 cut(s)	815, 845
Bsc4I	CCNNNNNNNGG	2 cut(s)	361, 1434
Bse118I	RCCGGY	1 cut(s)	1215
Bse3DI	GCAATG	1 cut(s)	966
Bse8I	GATNNNNATC	2 cut(s)	1034, 1638
BseBI	CCWGG	1 cut(s)	1458
BseCI	ATCGAT	1 cut(s)	1632
BseDI	CCNNGG	5 cut(s)	372, 1288, 1428, 1456, 1457
BseGI	GGATG	8 cut(s)	571, 592, 679, 946, 1051, 1183, 1408, 1551
BseJI	GATNNNNATC	2 cut(s)	1034, 1638
BseLI	CCNNNNNNNGG	2 cut(s)	361, 1434
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	2 cut(s)	183, 1146
BseRI	GAGGAG	2 cut(s)	104, 1336
BseSI	GKGCMC	1 cut(s)	1283
BseXI	GCAGC	1 cut(s)	306
BseYI	CCCAGC	1 cut(s)	1398
Bsh1236I	CGCG	1 cut(s)	379
BshFI	GGCC	5 cut(s)	126, 332, 727, 1368, 1676
BshTI	ACCGGT	1 cut(s)	1215
BshVI	ATCGAT	1 cut(s)	1632
BsiHKAI	GWGCWC	6 cut(s)	93, 650, 1161, 1267, 1283, 1665
BsiSI	CCGG	7 cut(s)	186, 208, 338, 432, 623, 1043, 1216
BslFI	GGGAC	2 cut(s)	1025, 1438
BslI	CCNNNNNNNGG	2 cut(s)	361, 1434
BsmFI	GGGAC	2 cut(s)	1025, 1438
BsmI	GAATGC	3 cut(s)	13, 717, 1236
BsnI	GGCC	5 cut(s)	126, 332, 727, 1368, 1676
Bsp1286I	GDGCHC	6 cut(s)	93, 650, 1161, 1267, 1283, 1665
Bsp143I	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
Bsp19I	CCATGG	1 cut(s)	1428
BspACI	CCGC	4 cut(s)	407, 715, 890, 1677
BspANI	GGCC	5 cut(s)	126, 332, 727, 1368, 1676
BspCNI	CTCAG	2 cut(s)	182, 1147
BspDI	ATCGAT	1 cut(s)	1632
BspFNI	CGCG	1 cut(s)	379
BspHI	TCATGA	1 cut(s)	64
BspLI	GGNNCC	3 cut(s)	212, 331, 1486
BspPI	GGATC	4 cut(s)	1043, 1235, 1656, 1731
BsrDI	GCAATG	1 cut(s)	966
BsrFI	RCCGGY	1 cut(s)	1215
BssAI	RCCGGY	1 cut(s)	1215
BssECI	CCNNGG	5 cut(s)	372, 1288, 1428, 1456, 1457
BssMI	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
BssNI	GRCGYC	1 cut(s)	1145
BssT1I	CCWWGG	1 cut(s)	1428
Bst2UI	CCWGG	1 cut(s)	1458
Bst4CI	ACNGT	4 cut(s)	238, 293, 999, 1587
Bst6I	CTCTTC	2 cut(s)	1200, 1697
BstACI	GRCGYC	1 cut(s)	1145
BstBAI	YACGTR	3 cut(s)	509, 1056, 1190
BstC8I	GCNNGC	2 cut(s)	1078, 1168
BstDEI	CTNAG	4 cut(s)	169, 1155, 1392, 1418
BstDSI	CCRYGG	2 cut(s)	1288, 1428
BstF5I	GGATG	8 cut(s)	571, 592, 679, 946, 1051, 1183, 1408, 1551
BstFNI	CGCG	1 cut(s)	379
BstH2I	RGCGCY	2 cut(s)	176, 1399
BstHHI	GCGC	6 cut(s)	175, 379, 775, 787, 1082, 1398
BstKTI	GATC	8 cut(s)	966, 1038, 1053, 1243, 1636, 1651, 1719, 1726
BstMBI	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
BstNI	CCWGG	1 cut(s)	1458
BstNSI	RCATGY	3 cut(s)	771, 874, 911
BstSCI	CCNGG	4 cut(s)	207, 431, 1041, 1456
BstSLI	GKGCMC	1 cut(s)	1283
BstUI	CGCG	1 cut(s)	379
BstV1I	GCAGC	1 cut(s)	306
BstV2I	GAAGAC	1 cut(s)	298
BstX2I	RGATCY	1 cut(s)	1648
BstYI	RGATCY	1 cut(s)	1648
Bsu15I	ATCGAT	1 cut(s)	1632
BsuI	GTATCC	1 cut(s)	1650
BsuRI	GGCC	5 cut(s)	126, 332, 727, 1368, 1676
BsuTUI	ATCGAT	1 cut(s)	1632
BtgI	CCRYGG	2 cut(s)	1288, 1428
BtsCI	GGATG	8 cut(s)	571, 592, 679, 946, 1051, 1183, 1408, 1551
Cac8I	GCNNGC	2 cut(s)	1078, 1168
CciI	TCATGA	1 cut(s)	64
CfoI	GCGC	6 cut(s)	175, 379, 775, 787, 1082, 1398
Cfr10I	RCCGGY	1 cut(s)	1215
Cfr13I	GGNCC	4 cut(s)	211, 330, 725, 1674
ClaI	ATCGAT	1 cut(s)	1632
CseI	GACGC	2 cut(s)	311, 1153
Csp6I	GTAC	6 cut(s)	205, 352, 478, 664, 992, 1057
CspAI	ACCGGT	1 cut(s)	1215
CviQI	GTAC	6 cut(s)	205, 352, 478, 664, 992, 1057
DdeI	CTNAG	4 cut(s)	169, 1155, 1392, 1418
DpnI	GATC	8 cut(s)	965, 1037, 1052, 1242, 1635, 1650, 1718, 1725
DpnII	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
DrdI	GACNNNNNNGTC	1 cut(s)	1150
DriI	GACNNNNNGTC	1 cut(s)	422
DseDI	GACNNNNNNGTC	1 cut(s)	1150
Eam1104I	CTCTTC	2 cut(s)	1200, 1697
Eam1105I	GACNNNNNGTC	1 cut(s)	422
EarI	CTCTTC	2 cut(s)	1200, 1697
Ecl136II	GAGCTC	2 cut(s)	91, 648
Eco130I	CCWWGG	1 cut(s)	1428
Eco24I	GRGCYC	2 cut(s)	93, 650
Eco47I	GGWCC	1 cut(s)	211
Eco47III	AGCGCT	2 cut(s)	174, 1397
Eco53kI	GAGCTC	2 cut(s)	91, 648
Eco57I	CTGAAG	1 cut(s)	1670
EcoICRI	GAGCTC	2 cut(s)	91, 648
EcoO109I	RGGNCCY	2 cut(s)	211, 330
EcoRI	GAATTC	1 cut(s)	553
EcoRII	CCWGG	1 cut(s)	1456
EcoT14I	CCWWGG	1 cut(s)	1428
EcoT22I	ATGCAT	2 cut(s)	13, 810
EcoT38I	GRGCYC	2 cut(s)	93, 650
ErhI	CCWWGG	1 cut(s)	1428
FaqI	GGGAC	2 cut(s)	1025, 1438
FauI	CCCGC	1 cut(s)	708
FauNDI	CATATG	1 cut(s)	474
FblI	GTMKAC	1 cut(s)	894
Fnu4HI	GCNGC	2 cut(s)	320, 1677
FokI	GGATG	8 cut(s)	578, 599, 686, 953, 1058, 1190, 1415, 1558
FriOI	GRGCYC	2 cut(s)	93, 650
Fsp4HI	GCNGC	2 cut(s)	320, 1677
FspAI	RTGCGCAY	1 cut(s)	774
FspBI	CTAG	5 cut(s)	215, 600, 779, 1236, 1259
FspI	TGCGCA	1 cut(s)	774
GlaI	GCGC	6 cut(s)	174, 378, 774, 786, 1081, 1397
GluI	GCNGC	2 cut(s)	320, 1677
GsaI	CCCAGC	1 cut(s)	1402
HaeII	RGCGCY	2 cut(s)	176, 1399
HaeIII	GGCC	5 cut(s)	126, 332, 727, 1368, 1676
HapII	CCGG	7 cut(s)	186, 208, 338, 432, 623, 1043, 1216
HgaI	GACGC	2 cut(s)	311, 1153
HhaI	GCGC	6 cut(s)	175, 379, 775, 787, 1082, 1398
Hin1I	GRCGYC	1 cut(s)	1145
Hin6I	GCGC	6 cut(s)	173, 377, 773, 785, 1080, 1396
HinP1I	GCGC	6 cut(s)	173, 377, 773, 785, 1080, 1396
HincII	GTYRAC	1 cut(s)	840
HindII	GTYRAC	1 cut(s)	840
HindIII	AAGCTT	2 cut(s)	1104, 1682
HinfI	GANTC	6 cut(s)	182, 440, 469, 1526, 1613, 1619
HpaI	GTTAAC	1 cut(s)	840
HpaII	CCGG	7 cut(s)	186, 208, 338, 432, 623, 1043, 1216
HphI	GGTGA	5 cut(s)	200, 327, 754, 763, 1456
Hpy166II	GTNNAC	5 cut(s)	840, 868, 895, 1133, 1281
Hpy188I	TCNGA	9 cut(s)	88, 154, 181, 263, 445, 940, 968, 1156, 1618
Hpy188III	TCNNGA	4 cut(s)	65, 1333, 1349, 1564
Hpy8I	GTNNAC	5 cut(s)	840, 868, 895, 1133, 1281
HpyAV	CCTTC	3 cut(s)	71, 1260, 1499
HpyCH4III	ACNGT	4 cut(s)	238, 293, 999, 1587
HpyCH4IV	ACGT	5 cut(s)	350, 508, 666, 1055, 1189
HpyF3I	CTNAG	4 cut(s)	169, 1155, 1392, 1418
HpySE526I	ACGT	5 cut(s)	350, 508, 666, 1055, 1189
Hsp92I	GRCGYC	1 cut(s)	1145
HspAI	GCGC	6 cut(s)	173, 377, 773, 785, 1080, 1396
KspAI	GTTAAC	1 cut(s)	840
Kzo9I	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
LmnI	GCTCC	4 cut(s)	88, 117, 625, 645
Lsp1109I	GCAGC	1 cut(s)	306
LweI	GCATC	7 cut(s)	20, 549, 609, 784, 1011, 1396, 1536
MaeI	CTAG	5 cut(s)	215, 600, 779, 1236, 1259
MaeII	ACGT	5 cut(s)	350, 508, 666, 1055, 1189
MaeIII	GTNAC	4 cut(s)	188, 742, 812, 1587
MalI	GATC	8 cut(s)	965, 1037, 1052, 1242, 1635, 1650, 1718, 1725
MboI	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
MboII	GAAGA	4 cut(s)	298, 1217, 1459, 1714
MflI	RGATCY	1 cut(s)	1648
MhlI	GDGCHC	6 cut(s)	93, 650, 1161, 1267, 1283, 1665
MluCI	AATT	7 cut(s)	460, 525, 553, 1295, 1496, 1536, 1729
MlyI	GAGTC	2 cut(s)	449, 1622
MmeI	TCCRAC	4 cut(s)	66, 423, 918, 1268
Mph1103I	ATGCAT	2 cut(s)	13, 810
MseI	TTAA	4 cut(s)	347, 669, 839, 1272
MslI	CAYNNNNRTG	2 cut(s)	314, 780
MspI	CCGG	7 cut(s)	186, 208, 338, 432, 623, 1043, 1216
MspR9I	CCNGG	4 cut(s)	209, 433, 1043, 1458
Mva1269I	GAATGC	3 cut(s)	13, 717, 1236
MvaI	CCWGG	1 cut(s)	1458
MvnI	CGCG	1 cut(s)	379
NciI	CCSGG	3 cut(s)	209, 433, 1043
NcoI	CCATGG	1 cut(s)	1428
NdeI	CATATG	1 cut(s)	474
NdeII	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
NlaIV	GGNNCC	3 cut(s)	212, 331, 1486
NmeAIII	GCCGAG	1 cut(s)	353
NmuCI	GTSAC	2 cut(s)	188, 742
NsbI	TGCGCA	1 cut(s)	774
NsiI	ATGCAT	2 cut(s)	13, 810
NspI	RCATGY	3 cut(s)	771, 874, 911
PagI	TCATGA	1 cut(s)	64
PasI	CCCWGGG	1 cut(s)	1457
PciI	ACATGT	2 cut(s)	870, 907
PctI	GAATGC	3 cut(s)	13, 717, 1236
PfeI	GAWTC	4 cut(s)	182, 469, 1526, 1619
PfoI	TCCNGGA	1 cut(s)	1041
PinAI	ACCGGT	1 cut(s)	1215
PkrI	GCNGC	2 cut(s)	321, 1678
PleI	GAGTC	2 cut(s)	448, 1621
PpsI	GAGTC	2 cut(s)	448, 1621
Ppu21I	YACGTR	3 cut(s)	509, 1056, 1190
PpuMI	RGGWCCY	1 cut(s)	211
PscI	ACATGT	2 cut(s)	870, 907
PsiI	TTATAA	1 cut(s)	455
Psp124BI	GAGCTC	2 cut(s)	93, 650
Psp5II	RGGWCCY	1 cut(s)	211
Psp6I	CCWGG	1 cut(s)	1456
PspFI	CCCAGC	1 cut(s)	1398
PspGI	CCWGG	1 cut(s)	1456
PspN4I	GGNNCC	3 cut(s)	212, 331, 1486
PspPI	GGNCC	4 cut(s)	211, 330, 725, 1674
PspPPI	RGGWCCY	1 cut(s)	211
PsuI	RGATCY	1 cut(s)	1648
RsaI	GTAC	6 cut(s)	206, 353, 479, 665, 993, 1058
RsaNI	GTAC	6 cut(s)	205, 352, 478, 664, 992, 1057
RseI	CAYNNNNRTG	2 cut(s)	314, 780
SacI	GAGCTC	2 cut(s)	93, 650
SaqAI	TTAA	4 cut(s)	347, 669, 839, 1272
SatI	GCNGC	2 cut(s)	320, 1677
Sau3AI	GATC	8 cut(s)	963, 1035, 1050, 1240, 1633, 1648, 1716, 1723
Sau96I	GGNCC	4 cut(s)	211, 330, 725, 1674
SchI	GAGTC	2 cut(s)	449, 1622
ScrFI	CCNGG	4 cut(s)	209, 433, 1043, 1458
SduI	GDGCHC	6 cut(s)	93, 650, 1161, 1267, 1283, 1665
SfaNI	GCATC	7 cut(s)	20, 549, 609, 784, 1011, 1396, 1536
SinI	GGWCC	1 cut(s)	211
SmiMI	CAYNNNNRTG	2 cut(s)	314, 780
SmlI	CTYRAG	3 cut(s)	92, 788, 1562
SmoI	CTYRAG	3 cut(s)	92, 788, 1562
Sse9I	AATT	7 cut(s)	460, 525, 553, 1295, 1496, 1536, 1729
SsiI	CCGC	4 cut(s)	407, 715, 890, 1677
SspI	AATATT	1 cut(s)	1010
SspMI	CTAG	5 cut(s)	215, 600, 779, 1236, 1259
SstI	GAGCTC	2 cut(s)	93, 650
StyD4I	CCNGG	4 cut(s)	207, 431, 1041, 1456
StyI	CCWWGG	1 cut(s)	1428
TaaI	ACNGT	4 cut(s)	238, 293, 999, 1587
TaiI	ACGT	5 cut(s)	353, 511, 669, 1058, 1192
TaqI	TCGA	6 cut(s)	296, 519, 557, 1228, 1332, 1632
TasI	AATT	7 cut(s)	460, 525, 553, 1295, 1496, 1536, 1729
TatI	WGTACW	1 cut(s)	991
TauI	GCSGC	1 cut(s)	1679
TfiI	GAWTC	4 cut(s)	182, 469, 1526, 1619
Tru1I	TTAA	4 cut(s)	347, 669, 839, 1272
Tru9I	TTAA	4 cut(s)	347, 669, 839, 1272
TseFI	GTSAC	2 cut(s)	188, 742
TseI	GCWGC	1 cut(s)	319
Tsp45I	GTSAC	2 cut(s)	188, 742
TspDTI	ATGAA	6 cut(s)	53, 81, 298, 461, 537, 1722
TspGWI	ACGGA	2 cut(s)	292, 1305
VneI	GTGCAC	1 cut(s)	1279
VpaK11BI	GGWCC	1 cut(s)	211
XapI	RAATTY	4 cut(s)	525, 553, 1496, 1536
XceI	RCATGY	3 cut(s)	771, 874, 911
XmiI	GTMKAC	1 cut(s)	894
XspI	CTAG	5 cut(s)	215, 600, 779, 1236, 1259
Zsp2I	ATGCAT	2 cut(s)	13, 810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.