L-threonine ammonia-lyase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1073200.v1.1 |
| pyrus_communis | pycom03g10520 pycom07g15700 pycom11g19440 pycom13g14230 pycom420g00720 |
| rosa_roxburghii | Rroxscaffold_7G00173200 |
| rosa_wichuraiana | Rw5G041380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 403, 418 |
| AciI | CCGC | 1 cut(s) | 470 |
| AcsI | RAATTY | 1 cut(s) | 381 |
| AfaI | GTAC | 1 cut(s) | 493 |
| AgsI | TTSAA | 6 cut(s) | 100, 200, 208, 314, 443, 588 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 92, 124 |
| AluBI | AGCT | 2 cut(s) | 236, 485 |
| AluI | AGCT | 2 cut(s) | 236, 485 |
| ApoI | RAATTY | 1 cut(s) | 381 |
| AspS9I | GGNCC | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 4 cut(s) | 100, 305, 511, 545 |
| AvaII | GGWCC | 1 cut(s) | 105 |
| BccI | CCATC | 1 cut(s) | 140 |
| BciVI | GTATCC | 1 cut(s) | 106 |
| BfuI | GTATCC | 1 cut(s) | 106 |
| Bme18I | GGWCC | 1 cut(s) | 105 |
| BmgT120I | GGNCC | 1 cut(s) | 105 |
| BmiI | GGNNCC | 2 cut(s) | 106, 186 |
| BmsI | GCATC | 1 cut(s) | 541 |
| BpuEI | CTTGAG | 1 cut(s) | 150 |
| BsaBI | GATNNNNATC | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 1 cut(s) | 108 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 141, 171 |
| Bse8I | GATNNNNATC | 1 cut(s) | 117 |
| BseDI | CCNNGG | 1 cut(s) | 108 |
| BseJI | GATNNNNATC | 1 cut(s) | 117 |
| BseMII | CTCAG | 2 cut(s) | 194, 441 |
| BseYI | CCCAGC | 1 cut(s) | 485 |
| Bsp1407I | TGTACA | 1 cut(s) | 491 |
| Bsp143I | GATC | 1 cut(s) | 322 |
| BspACI | CCGC | 1 cut(s) | 470 |
| BspCNI | CTCAG | 2 cut(s) | 193, 442 |
| BspHI | TCATGA | 1 cut(s) | 370 |
| BspLI | GGNNCC | 2 cut(s) | 106, 186 |
| BsrGI | TGTACA | 1 cut(s) | 491 |
| BssECI | CCNNGG | 1 cut(s) | 108 |
| BssMI | GATC | 1 cut(s) | 322 |
| BssNAI | GTATAC | 1 cut(s) | 404 |
| BssT1I | CCWWGG | 1 cut(s) | 108 |
| Bst1107I | GTATAC | 1 cut(s) | 404 |
| Bst4CI | ACNGT | 2 cut(s) | 416, 509 |
| Bst6I | CTCTTC | 1 cut(s) | 521 |
| BstAUI | TGTACA | 1 cut(s) | 491 |
| BstDEI | CTNAG | 3 cut(s) | 180, 326, 450 |
| BstKTI | GATC | 1 cut(s) | 325 |
| BstMBI | GATC | 1 cut(s) | 322 |
| BstZ17I | GTATAC | 1 cut(s) | 404 |
| BsuI | GTATCC | 1 cut(s) | 106 |
| CciI | TCATGA | 1 cut(s) | 370 |
| Cfr13I | GGNCC | 1 cut(s) | 105 |
| Csp6I | GTAC | 1 cut(s) | 492 |
| CviAII | CATG | 3 cut(s) | 122, 371, 395 |
| CviJI | RGCY | 5 cut(s) | 185, 236, 448, 485, 592 |
| CviKI_1 | RGCY | 5 cut(s) | 185, 236, 448, 485, 592 |
| CviQI | GTAC | 1 cut(s) | 492 |
| DdeI | CTNAG | 3 cut(s) | 180, 326, 450 |
| DpnI | GATC | 1 cut(s) | 324 |
| DpnII | GATC | 1 cut(s) | 322 |
| Eam1104I | CTCTTC | 1 cut(s) | 521 |
| EarI | CTCTTC | 1 cut(s) | 521 |
| Eco130I | CCWWGG | 1 cut(s) | 108 |
| Eco47I | GGWCC | 1 cut(s) | 105 |
| EcoO109I | RGGNCCY | 1 cut(s) | 105 |
| EcoT14I | CCWWGG | 1 cut(s) | 108 |
| ErhI | CCWWGG | 1 cut(s) | 108 |
| FaeI | CATG | 3 cut(s) | 125, 374, 398 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 92, 124 |
| FatI | CATG | 3 cut(s) | 121, 370, 394 |
| FblI | GTMKAC | 2 cut(s) | 403, 418 |
| GsaI | CCCAGC | 1 cut(s) | 489 |
| Hin1II | CATG | 3 cut(s) | 125, 374, 398 |
| HinfI | GANTC | 2 cut(s) | 50, 256 |
| HphI | GGTGA | 4 cut(s) | 100, 305, 511, 545 |
| Hpy166II | GTNNAC | 4 cut(s) | 404, 419, 492, 512 |
| Hpy188I | TCNGA | 1 cut(s) | 220 |
| Hpy188III | TCNNGA | 3 cut(s) | 54, 200, 371 |
| Hpy8I | GTNNAC | 4 cut(s) | 404, 419, 492, 512 |
| HpyAV | CCTTC | 2 cut(s) | 94, 366 |
| HpyCH4III | ACNGT | 2 cut(s) | 416, 509 |
| HpyF3I | CTNAG | 3 cut(s) | 180, 326, 450 |
| Hsp92II | CATG | 3 cut(s) | 125, 374, 398 |
| Kzo9I | GATC | 1 cut(s) | 322 |
| LmnI | GCTCC | 1 cut(s) | 190 |
| LpnPI | CCDG | 7 cut(s) | 39, 45, 167, 321, 462, 471, 589 |
| LweI | GCATC | 1 cut(s) | 541 |
| MaeIII | GTNAC | 2 cut(s) | 34, 477 |
| MalI | GATC | 1 cut(s) | 324 |
| MboI | GATC | 1 cut(s) | 322 |
| MboII | GAAGA | 2 cut(s) | 16, 508 |
| MfeI | CAATTG | 1 cut(s) | 288 |
| MluCI | AATT | 6 cut(s) | 25, 67, 266, 288, 381, 473 |
| MnlI | CCTC | 3 cut(s) | 143, 417, 529 |
| MseI | TTAA | 2 cut(s) | 21, 129 |
| MslI | CAYNNNNRTG | 1 cut(s) | 77 |
| MunI | CAATTG | 1 cut(s) | 288 |
| NdeII | GATC | 1 cut(s) | 322 |
| NlaIII | CATG | 3 cut(s) | 125, 374, 398 |
| NlaIV | GGNNCC | 2 cut(s) | 106, 186 |
| PagI | TCATGA | 1 cut(s) | 370 |
| PfeI | GAWTC | 2 cut(s) | 50, 256 |
| PpuMI | RGGWCCY | 1 cut(s) | 105 |
| Psp5II | RGGWCCY | 1 cut(s) | 105 |
| PspFI | CCCAGC | 1 cut(s) | 485 |
| PspN4I | GGNNCC | 2 cut(s) | 106, 186 |
| PspPI | GGNCC | 1 cut(s) | 105 |
| PspPPI | RGGWCCY | 1 cut(s) | 105 |
| RsaI | GTAC | 1 cut(s) | 493 |
| RsaNI | GTAC | 1 cut(s) | 492 |
| RseI | CAYNNNNRTG | 1 cut(s) | 77 |
| SaqAI | TTAA | 2 cut(s) | 21, 129 |
| Sau3AI | GATC | 1 cut(s) | 322 |
| Sau96I | GGNCC | 1 cut(s) | 105 |
| SetI | ASST | 7 cut(s) | 16, 238, 358, 409, 424, 487, 501 |
| SfaNI | GCATC | 1 cut(s) | 541 |
| SinI | GGWCC | 1 cut(s) | 105 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 77 |
| SmlI | CTYRAG | 1 cut(s) | 165 |
| SmoI | CTYRAG | 1 cut(s) | 165 |
| Sse9I | AATT | 6 cut(s) | 25, 67, 266, 288, 381, 473 |
| SsiI | CCGC | 1 cut(s) | 470 |
| StyI | CCWWGG | 1 cut(s) | 108 |
| TaaI | ACNGT | 2 cut(s) | 416, 509 |
| TasI | AATT | 6 cut(s) | 25, 67, 266, 288, 381, 473 |
| TatI | WGTACW | 1 cut(s) | 491 |
| TfiI | GAWTC | 2 cut(s) | 50, 256 |
| Tru1I | TTAA | 2 cut(s) | 21, 129 |
| Tru9I | TTAA | 2 cut(s) | 21, 129 |
| TspDTI | ATGAA | 4 cut(s) | 17, 34, 61, 383 |
| VpaK11BI | GGWCC | 1 cut(s) | 105 |
| XapI | RAATTY | 1 cut(s) | 381 |
| XmiI | GTMKAC | 2 cut(s) | 403, 418 |