Retroviral aspartyl protease
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1073200.v1.1 |
| pyrus_communis | pycom03g10520 pycom07g15700 pycom11g19440 pycom13g14230 pycom420g00720 |
| rosa_roxburghii | Rroxscaffold_7G00173200 |
| rosa_wichuraiana | Rw5G041380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 212 |
| AfaI | GTAC | 1 cut(s) | 69 |
| AgsI | TTSAA | 4 cut(s) | 114, 158, 218, 361 |
| AjnI | CCWGG | 1 cut(s) | 286 |
| AluBI | AGCT | 5 cut(s) | 91, 161, 184, 293, 376 |
| AluI | AGCT | 5 cut(s) | 91, 161, 184, 293, 376 |
| AoxI | GGCC | 1 cut(s) | 388 |
| ApeKI | GCWGC | 1 cut(s) | 424 |
| ApoI | RAATTY | 1 cut(s) | 212 |
| BbsI | GAAGAC | 1 cut(s) | 343 |
| BbvI | GCAGC | 1 cut(s) | 411 |
| BccI | CCATC | 2 cut(s) | 56, 244 |
| BciT130I | CCWGG | 1 cut(s) | 288 |
| BfaI | CTAG | 1 cut(s) | 255 |
| BisI | GCNGC | 1 cut(s) | 425 |
| BlpI | GCTNAGC | 1 cut(s) | 294 |
| BlsI | GCNGC | 1 cut(s) | 426 |
| Bme1390I | CCNGG | 1 cut(s) | 288 |
| BmrFI | CCNGG | 1 cut(s) | 288 |
| BmrI | ACTGGG | 1 cut(s) | 408 |
| BmsI | GCATC | 1 cut(s) | 273 |
| BmuI | ACTGGG | 1 cut(s) | 408 |
| BpiI | GAAGAC | 1 cut(s) | 343 |
| BpmI | CTGGAG | 1 cut(s) | 309 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 294 |
| Bse1I | ACTGG | 1 cut(s) | 414 |
| Bse3DI | GCAATG | 1 cut(s) | 419 |
| BseBI | CCWGG | 1 cut(s) | 288 |
| BseMI | GCAATG | 1 cut(s) | 419 |
| BseMII | CTCAG | 3 cut(s) | 132, 159, 332 |
| BseNI | ACTGG | 1 cut(s) | 414 |
| BseXI | GCAGC | 1 cut(s) | 411 |
| BshFI | GGCC | 1 cut(s) | 390 |
| BsnI | GGCC | 1 cut(s) | 390 |
| Bsp143I | GATC | 1 cut(s) | 166 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 294 |
| BspANI | GGCC | 1 cut(s) | 390 |
| BspCNI | CTCAG | 3 cut(s) | 131, 158, 333 |
| BsrDI | GCAATG | 1 cut(s) | 419 |
| BsrI | ACTGG | 1 cut(s) | 414 |
| BssMI | GATC | 1 cut(s) | 166 |
| Bst2UI | CCWGG | 1 cut(s) | 288 |
| BstC8I | GCNNGC | 2 cut(s) | 125, 374 |
| BstDEI | CTNAG | 5 cut(s) | 12, 118, 145, 294, 341 |
| BstKTI | GATC | 1 cut(s) | 169 |
| BstMBI | GATC | 1 cut(s) | 166 |
| BstNI | CCWGG | 1 cut(s) | 288 |
| BstNSI | RCATGY | 1 cut(s) | 127 |
| BstSCI | CCNGG | 1 cut(s) | 286 |
| BstV1I | GCAGC | 1 cut(s) | 411 |
| BstV2I | GAAGAC | 1 cut(s) | 343 |
| BsuRI | GGCC | 1 cut(s) | 390 |
| BtsIMutI | CAGTG | 1 cut(s) | 278 |
| Cac8I | GCNNGC | 2 cut(s) | 125, 374 |
| Csp6I | GTAC | 1 cut(s) | 68 |
| CviAII | CATG | 3 cut(s) | 124, 263, 322 |
| CviJI | RGCY | 9 cut(s) | 91, 161, 184, 293, 298, 376, 390, 395, 401 |
| CviKI_1 | RGCY | 9 cut(s) | 91, 161, 184, 293, 298, 376, 390, 395, 401 |
| CviQI | GTAC | 1 cut(s) | 68 |
| DdeI | CTNAG | 5 cut(s) | 12, 118, 145, 294, 341 |
| DpnI | GATC | 1 cut(s) | 168 |
| DpnII | GATC | 1 cut(s) | 166 |
| EcoRII | CCWGG | 1 cut(s) | 286 |
| FaeI | CATG | 3 cut(s) | 127, 266, 325 |
| FaiI | YATR | 9 cut(s) | 28, 42, 108, 125, 140, 264, 305, 323, 398 |
| FatI | CATG | 3 cut(s) | 123, 262, 321 |
| Fnu4HI | GCNGC | 1 cut(s) | 425 |
| Fsp4HI | GCNGC | 1 cut(s) | 425 |
| FspBI | CTAG | 1 cut(s) | 255 |
| GluI | GCNGC | 1 cut(s) | 425 |
| GsuI | CTGGAG | 1 cut(s) | 309 |
| HaeIII | GGCC | 1 cut(s) | 390 |
| Hin1II | CATG | 3 cut(s) | 127, 266, 325 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HinfI | GANTC | 2 cut(s) | 110, 232 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy188I | TCNGA | 2 cut(s) | 166, 241 |
| Hpy188III | TCNNGA | 2 cut(s) | 361, 431 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 4 cut(s) | 142, 196, 333, 372 |
| HpyF3I | CTNAG | 5 cut(s) | 12, 118, 145, 294, 341 |
| Hsp92II | CATG | 3 cut(s) | 127, 266, 325 |
| Kzo9I | GATC | 1 cut(s) | 166 |
| LmnI | GCTCC | 1 cut(s) | 290 |
| LpnPI | CCDG | 7 cut(s) | 105, 132, 182, 273, 300, 362, 427 |
| Lsp1109I | GCAGC | 1 cut(s) | 411 |
| LweI | GCATC | 1 cut(s) | 273 |
| MaeI | CTAG | 1 cut(s) | 255 |
| MalI | GATC | 1 cut(s) | 168 |
| MboI | GATC | 1 cut(s) | 166 |
| MboII | GAAGA | 2 cut(s) | 230, 348 |
| MfeI | CAATTG | 1 cut(s) | 328 |
| MluCI | AATT | 3 cut(s) | 191, 212, 328 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 1 cut(s) | 261 |
| MspR9I | CCNGG | 1 cut(s) | 288 |
| MunI | CAATTG | 1 cut(s) | 328 |
| MvaI | CCWGG | 1 cut(s) | 288 |
| NdeII | GATC | 1 cut(s) | 166 |
| NlaIII | CATG | 3 cut(s) | 127, 266, 325 |
| NspI | RCATGY | 1 cut(s) | 127 |
| PaeI | GCATGC | 1 cut(s) | 127 |
| PfeI | GAWTC | 2 cut(s) | 110, 232 |
| PkrI | GCNGC | 1 cut(s) | 426 |
| Psp6I | CCWGG | 1 cut(s) | 286 |
| PspGI | CCWGG | 1 cut(s) | 286 |
| RsaI | GTAC | 1 cut(s) | 69 |
| RsaNI | GTAC | 1 cut(s) | 68 |
| SatI | GCNGC | 1 cut(s) | 425 |
| Sau3AI | GATC | 1 cut(s) | 166 |
| ScrFI | CCNGG | 1 cut(s) | 288 |
| SetI | ASST | 7 cut(s) | 93, 163, 186, 253, 295, 304, 378 |
| SfaNI | GCATC | 1 cut(s) | 273 |
| SphI | GCATGC | 1 cut(s) | 127 |
| Sse9I | AATT | 3 cut(s) | 191, 212, 328 |
| SspI | AATATT | 1 cut(s) | 225 |
| SspMI | CTAG | 1 cut(s) | 255 |
| StyD4I | CCNGG | 1 cut(s) | 286 |
| TasI | AATT | 3 cut(s) | 191, 212, 328 |
| TfiI | GAWTC | 2 cut(s) | 110, 232 |
| TscAI | CASTG | 1 cut(s) | 285 |
| TseI | GCWGC | 1 cut(s) | 424 |
| TspDTI | ATGAA | 2 cut(s) | 29, 408 |
| TspRI | CASTG | 1 cut(s) | 285 |
| XapI | RAATTY | 1 cut(s) | 212 |
| XceI | RCATGY | 1 cut(s) | 127 |
| XspI | CTAG | 1 cut(s) | 255 |