Retroviral aspartyl protease
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1073200.v1.1 |
| pyrus_communis | pycom03g10520 pycom07g15700 pycom11g19440 pycom13g14230 pycom420g00720 |
| rosa_roxburghii | Rroxscaffold_7G00173200 |
| rosa_wichuraiana | Rw5G041380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 160 |
| AciI | CCGC | 2 cut(s) | 173, 234 |
| AcoI | YGGCCR | 3 cut(s) | 195, 214, 264 |
| AcsI | RAATTY | 1 cut(s) | 188 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 183, 204 |
| AgsI | TTSAA | 3 cut(s) | 85, 95, 328 |
| AjnI | CCWGG | 2 cut(s) | 163, 250 |
| Alw21I | GWGCWC | 1 cut(s) | 172 |
| AoxI | GGCC | 4 cut(s) | 36, 195, 214, 264 |
| ApoI | RAATTY | 1 cut(s) | 188 |
| BanI | GGYRCC | 1 cut(s) | 160 |
| Bbv12I | GWGCWC | 1 cut(s) | 172 |
| BceAI | ACGGC | 1 cut(s) | 221 |
| BciT130I | CCWGG | 2 cut(s) | 165, 252 |
| Bme1390I | CCNGG | 2 cut(s) | 165, 252 |
| BmiI | GGNNCC | 1 cut(s) | 162 |
| BmrFI | CCNGG | 2 cut(s) | 165, 252 |
| BsaJI | CCNNGG | 3 cut(s) | 203, 242, 292 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 183, 204 |
| Bse118I | RCCGGY | 1 cut(s) | 216 |
| Bse1I | ACTGG | 1 cut(s) | 162 |
| BseBI | CCWGG | 2 cut(s) | 165, 252 |
| BseDI | CCNNGG | 3 cut(s) | 203, 242, 292 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 183, 204 |
| BseNI | ACTGG | 1 cut(s) | 162 |
| BshFI | GGCC | 4 cut(s) | 38, 197, 216, 266 |
| BshNI | GGYRCC | 1 cut(s) | 160 |
| BsiHKAI | GWGCWC | 1 cut(s) | 172 |
| BsiSI | CCGG | 4 cut(s) | 194, 217, 231, 263 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 183, 204 |
| BsnI | GGCC | 4 cut(s) | 38, 197, 216, 266 |
| Bsp1286I | GDGCHC | 1 cut(s) | 172 |
| BspACI | CCGC | 2 cut(s) | 173, 234 |
| BspANI | GGCC | 4 cut(s) | 38, 197, 216, 266 |
| BspLI | GGNNCC | 1 cut(s) | 162 |
| BspT107I | GGYRCC | 1 cut(s) | 160 |
| BsrFI | RCCGGY | 1 cut(s) | 216 |
| BsrI | ACTGG | 1 cut(s) | 162 |
| BssAI | RCCGGY | 1 cut(s) | 216 |
| BssECI | CCNNGG | 3 cut(s) | 203, 242, 292 |
| BssT1I | CCWWGG | 1 cut(s) | 292 |
| Bst2UI | CCWGG | 2 cut(s) | 165, 252 |
| Bst4CI | ACNGT | 1 cut(s) | 60 |
| Bst6I | CTCTTC | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 2 cut(s) | 218, 222 |
| BstDSI | CCRYGG | 2 cut(s) | 203, 242 |
| BstNI | CCWGG | 2 cut(s) | 165, 252 |
| BstSCI | CCNGG | 2 cut(s) | 163, 250 |
| BsuRI | GGCC | 4 cut(s) | 38, 197, 216, 266 |
| BtgI | CCRYGG | 2 cut(s) | 203, 242 |
| BtsIMutI | CAGTG | 1 cut(s) | 155 |
| Cac8I | GCNNGC | 2 cut(s) | 218, 222 |
| Cfr10I | RCCGGY | 1 cut(s) | 216 |
| CviAII | CATG | 1 cut(s) | 140 |
| CviJI | RGCY | 8 cut(s) | 38, 138, 197, 216, 247, 255, 266, 324 |
| CviKI_1 | RGCY | 8 cut(s) | 38, 138, 197, 216, 247, 255, 266, 324 |
| EaeI | YGGCCR | 3 cut(s) | 195, 214, 264 |
| Eam1104I | CTCTTC | 1 cut(s) | 90 |
| EarI | CTCTTC | 1 cut(s) | 90 |
| EciI | GGCGGA | 1 cut(s) | 249 |
| Eco130I | CCWWGG | 1 cut(s) | 292 |
| Eco147I | AGGCCT | 1 cut(s) | 38 |
| EcoRII | CCWGG | 2 cut(s) | 163, 250 |
| EcoT14I | CCWWGG | 1 cut(s) | 292 |
| ErhI | CCWWGG | 1 cut(s) | 292 |
| FaeI | CATG | 1 cut(s) | 143 |
| FaiI | YATR | 3 cut(s) | 141, 300, 337 |
| FatI | CATG | 1 cut(s) | 139 |
| HaeIII | GGCC | 4 cut(s) | 38, 197, 216, 266 |
| HapII | CCGG | 4 cut(s) | 194, 217, 231, 263 |
| Hin1II | CATG | 1 cut(s) | 143 |
| HincII | GTYRAC | 1 cut(s) | 63 |
| HindII | GTYRAC | 1 cut(s) | 63 |
| HinfI | GANTC | 3 cut(s) | 109, 151, 307 |
| HpaI | GTTAAC | 1 cut(s) | 63 |
| HpaII | CCGG | 4 cut(s) | 194, 217, 231, 263 |
| Hpy166II | GTNNAC | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 2 cut(s) | 82, 132 |
| Hpy8I | GTNNAC | 1 cut(s) | 63 |
| HpyAV | CCTTC | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 1 cut(s) | 60 |
| Hsp92II | CATG | 1 cut(s) | 143 |
| KroI | GCCGGC | 1 cut(s) | 216 |
| KroNI | GCCGGC | 1 cut(s) | 218 |
| KspAI | GTTAAC | 1 cut(s) | 63 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| MaeIII | GTNAC | 2 cut(s) | 3, 69 |
| MboII | GAAGA | 1 cut(s) | 107 |
| MhlI | GDGCHC | 1 cut(s) | 172 |
| MluCI | AATT | 3 cut(s) | 29, 188, 328 |
| MmeI | TCCRAC | 2 cut(s) | 66, 297 |
| MnlI | CCTC | 5 cut(s) | 28, 49, 70, 91, 177 |
| MroNI | GCCGGC | 1 cut(s) | 216 |
| MseI | TTAA | 1 cut(s) | 62 |
| MspI | CCGG | 4 cut(s) | 194, 217, 231, 263 |
| MspR9I | CCNGG | 2 cut(s) | 165, 252 |
| MvaI | CCWGG | 2 cut(s) | 165, 252 |
| NaeI | GCCGGC | 1 cut(s) | 218 |
| NgoMIV | GCCGGC | 1 cut(s) | 216 |
| NlaIII | CATG | 1 cut(s) | 143 |
| NlaIV | GGNNCC | 1 cut(s) | 162 |
| PceI | AGGCCT | 1 cut(s) | 38 |
| PdiI | GCCGGC | 1 cut(s) | 218 |
| PfeI | GAWTC | 3 cut(s) | 109, 151, 307 |
| Psp6I | CCWGG | 2 cut(s) | 163, 250 |
| PspGI | CCWGG | 2 cut(s) | 163, 250 |
| PspN4I | GGNNCC | 1 cut(s) | 162 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| ScrFI | CCNGG | 2 cut(s) | 165, 252 |
| SduI | GDGCHC | 1 cut(s) | 172 |
| SetI | ASST | 4 cut(s) | 48, 81, 102, 318 |
| Sse9I | AATT | 3 cut(s) | 29, 188, 328 |
| SseBI | AGGCCT | 1 cut(s) | 38 |
| SsiI | CCGC | 2 cut(s) | 173, 234 |
| StuI | AGGCCT | 1 cut(s) | 38 |
| StyD4I | CCNGG | 2 cut(s) | 163, 250 |
| StyI | CCWWGG | 1 cut(s) | 292 |
| TaaI | ACNGT | 1 cut(s) | 60 |
| TaqI | TCGA | 3 cut(s) | 131, 182, 305 |
| TasI | AATT | 3 cut(s) | 29, 188, 328 |
| TfiI | GAWTC | 3 cut(s) | 109, 151, 307 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TscAI | CASTG | 1 cut(s) | 162 |
| TspDTI | ATGAA | 1 cut(s) | 32 |
| TspGWI | ACGGA | 1 cut(s) | 300 |
| TspRI | CASTG | 1 cut(s) | 162 |
| XapI | RAATTY | 1 cut(s) | 188 |