pycom03g13260

Armadillo repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0003591
Physical Location & Seq
Reverse (-)
14190943 .. 14199125
8183 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2400 bp
ATGATTTTTGTTCTGAATTGCTTTGTTAGTCTTTTGGGTGACGAATGCGATGGTTTTTTGTTATCTTGCTTTTTAGTCCGAGACTGTATTAAACTCCAACTTAGTCCTGAAGCTAGTCCAGTCCGAGATAGTCTGGTGCAACAAACGCATCCTAAGTCACCTAGTGATAGTTATTGGCACAAAATTTTAGACTTAAACAAAAAATTTCCTTTTCTCCTCTCATTCTCTCTCTCTCTCTCTCTCTCGTTTTCCGCCGAAGACCCGAAGTCATCCATTTTTCTGTCCCTTTCCAGAGGAGGCTATACCTCGCTCTTACGTGGAGCGCTGTGGCCATTGCATGTCACCCGAATCGGCTCCTCCAGCGATACGACGACGATGCCCACCGCAGCCTCACCCTCAGTCTCCGCCTCCGCCTCTTCAACCAGCGGGGCCCACTCGGACCTCCTGACCCGGCTGACGTCACCCGACTCCGACGTCCAGCTCAAGGCTCTCAGAGAGCTCAAGAACCGCATCATCGGCAACCGCACCAAGAAGCTCTCCTTCATCAAGCTCGGCCTGGTCCCACCCGTCGCCGCCATCCTCGCCTCTAGAGCCCAATCCCAATCCCAATCCCAATCCCAATCCCATCCTCGCGACAACAATCTCCTTGTTCAGTCGGCCGCTGCCCTCGGAAGCTTCGCTTGCGGCTTCGATGCCGGCGTCCAAGCCGTTCTCGACGCCGGCGTATTTCCTAACCTCTTATTGCTTCTATCGCATCCTGATGCTAAGGTTGTCGATTCCGGTGCACGTTCCTTAAGGATGATTTATCAATCAAAGCTGGCTCCAAAGTGTGATTTCCTTCAAGAGAAAAACATGGAGTTTCTTCTTAGGTTATTGAATAGTGAGAATGAAAATGTTACTGGACTTGGTACAAGTATAATCATACGTTCTTGTGAGACTACTGCTGAACAGAAGGCACTGTGTCATTCTGGGGTTGTTAAGAAGTTAATTAGCCTTCTTGAAGGTTCTCTAAGTCAGAGAGATAATAGTTTAGAGTCTCTAGCCACAATTATGAAGAACAATGTCGAAGCTGTTTCAGAGTTTGTGGGATCTGAAAATGGGAGAGATTTGAGTTCTGTAATTGAATTGACAAAGGATAGGTACCCCCGTACCAGATTATTGGCCTCTATGTGCCTGATTGTTATAAGGAACTCCTCTTCTTGCTATTTGCAAGACATAGGCATCGAAACCAAGTTGGTGCATCTCTTACTTGAACTTCATGATGATCCTGGTCAAGTTGGAGATGAAGCTCCCTCTGCATTTTCTAGTTTAATTTCTGAGAAACTGGATCTACAGAAACTAGCATTTGAGGCAAATGCTGTTGATAAACTTTACAACCACTTGCAAAAGAGTCTGTTACATCCCAAACGCTTCGAAGGAATATTGCTTGCACTGGCTGATCTATGCTCAAAGTTGGAAGGCTGCAGGTCTAGATTCCTGTCATTGCAGGCATTGAAATTGGTATCTGATGCACTAACTCATGATAGTTTTGAAGTACGTACGGCAGCTTGCATTTGTTTAAGATCTGTCTCTCGGTCAATCAAGAATTTGTGTGCAGGTAATTTTATGAATGAAATGATTGTCCCTCCCTTGGTTCGGCTATTGGATGACCCCTCTACATCTGTCCAGGTTGCAGCTCTCAGTGCGATTGGCAACGTAGTAGTTGATTTTACTATGCGTAGGTCATTGTTTGTACTGTGTGGAGGTGTGAAACAGCTTGTTCAGTTATCCAGATCAATGGATTCAACTGTGAGGTTAAACGCTATATGGGCTTTAAGGAACTTGACGTTCCTTGCAGACAATGCCTGTAAACAAGAGATCTTCATGGAGCTCACAGCTTCTTCATTAGCAAGTGTCATCTGTGACCCTGAACCTTTTGTCCAAGAGCAGGCTCTTGCACTGGTCCGGAATCTTGTTGATGGATGTATGAAGTCTATTGAGCTTGTCTTTGCTGAAGATGGCATGTTATTAGATGCTGTTGGGAGGCAATTGCAGAATGCTTCAAAAGATGAAATTTGGTTACAGGGAATGTATGTGTTTGGCAATGTTGCAAGTGGGAATGAATTTCACAAGGAAGCAGTTATGCAGCAACTCATTCCACAAGGAGACAATGGGACACAATCTTTTATTCTCAAGTTTTTGCAGAGTAATGAGAACCAATTACGTACAGCTTCTGTCTGGGCCATTGTGAATCTTACTTTTCCATCAAGTCCTGGTGCATTTAGCCGCCTTGTGAAACTACATGATGCTGGCATAGTTTCTCAAGTAAAGAGCATGGTCAATGATCCTTGCCTAGATGTGAAGCTTCGAGTAAGAACAGCGATTGGGCAGTTTACAACCTTCGGTGATTGCTCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm DUF4220

Protein Analysis

800

Amino Acids

87.19

Weight (kDa)

6.71

Isoelectric Point (pI)

48.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arm PF00514 580 - 609 4.9e-07 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1184
AasI GACNNNNNNGTC 1 cut(s) 473
AatII GACGTC 2 cut(s) 461, 477
Acc36I ACCTGC 2 cut(s) 1455, 1586
Acc65I GGTACC 1 cut(s) 1140
AccB1I GGYRCC 1 cut(s) 1140
AccII CGCG 1 cut(s) 633
AccIII TCCGGA 1 cut(s) 1944
AclWI GGATC 4 cut(s) 1096, 1259, 1335, 2318
AcoI YGGCCR 2 cut(s) 329, 657
AcsI RAATTY 5 cut(s) 183, 203, 1585, 2052, 2102
AcuI CTGAAG 2 cut(s) 129, 2013
AcyI GRCGYC 4 cut(s) 458, 474, 699, 717
AdeI CACNNNGTG 1 cut(s) 164
AfaI GTAC 7 cut(s) 910, 1142, 1150, 1536, 1540, 1734, 2206
AfeI AGCGCT 1 cut(s) 324
AfiI CCNNNNNNNGG 4 cut(s) 484, 1630, 1635, 1927
AflII CTTAAG 1 cut(s) 793
AhdI GACNNNNNGTC 1 cut(s) 265
AjnI CCWGG 4 cut(s) 555, 1267, 1665, 2251
AloI GAACNNNNNNTCC 2 cut(s) 1902, 1934
Alw21I GWGCWC 3 cut(s) 501, 787, 1872
Alw26I GTCTC 6 cut(s) 75, 406, 929, 1041, 1573, 2139
Alw44I GTGCAC 1 cut(s) 783
AlwI GGATC 4 cut(s) 1096, 1259, 1335, 2318
AlwNI CAGNNNCTG 1 cut(s) 2213
Aor13HI TCCGGA 1 cut(s) 1944
Aor51HI AGCGCT 1 cut(s) 324
AoxI GGCC 6 cut(s) 329, 429, 553, 657, 1161, 2220
ApaI GGGCCC 1 cut(s) 433
ApaLI GTGCAC 1 cut(s) 783
ApeKI GCWGC 6 cut(s) 386, 662, 1461, 1544, 1673, 2125
ApoI RAATTY 5 cut(s) 183, 203, 1585, 2052, 2102
Asp718I GGTACC 1 cut(s) 1140
AspLEI GCGC 1 cut(s) 325
AspS9I GGNCC 6 cut(s) 429, 430, 439, 559, 1942, 2220
AsuC2I CCSGG 1 cut(s) 451
AsuHPI GGTGA 6 cut(s) 50, 150, 334, 384, 453, 2396
AsuII TTCGAA 1 cut(s) 1413
AvaII GGWCC 3 cut(s) 439, 559, 1942
BaeGI GKGCMC 2 cut(s) 433, 787
BaeI ACNNNNGTAYC 4 cut(s) 1132, 1132, 1165, 1165
BalI TGGCCA 1 cut(s) 331
BanI GGYRCC 1 cut(s) 1140
BanII GRGCYC 4 cut(s) 433, 501, 595, 1872
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 3 cut(s) 501, 787, 1872
BbvI GCAGC 6 cut(s) 398, 649, 1448, 1556, 1685, 2137
BccI CCATC 6 cut(s) 44, 584, 633, 1952, 1991, 2251
BceAI ACGGC 2 cut(s) 692, 1557
BcgI CGANNNNNNTGC 4 cut(s) 358, 392, 764, 798
BciT130I CCWGG 4 cut(s) 557, 1269, 1667, 2253
BcnI CCSGG 1 cut(s) 451
BcoDI GTCTC 6 cut(s) 75, 406, 929, 1041, 1573, 2139
BfaI CTAG 8 cut(s) 114, 162, 588, 1040, 1305, 1340, 1470, 2333
BfmI CTRYAG 2 cut(s) 1331, 1462
BfoI RGCGCY 1 cut(s) 326
BfrI CTTAAG 1 cut(s) 793
BfuAI ACCTGC 2 cut(s) 1455, 1586
BglII AGATCT 2 cut(s) 1562, 1857
Bme1390I CCNGG 5 cut(s) 451, 557, 1269, 1667, 2253
Bme18I GGWCC 3 cut(s) 439, 559, 1942
BmeRI GACNNNNNGTC 1 cut(s) 265
BmgT120I GGNCC 6 cut(s) 429, 430, 439, 559, 1942, 2220
BmiI GGNNCC 6 cut(s) 355, 430, 431, 561, 822, 1142
BmrFI CCNGG 5 cut(s) 451, 557, 1269, 1667, 2253
BpiI GAAGAC 1 cut(s) 264
BpmI CTGGAG 1 cut(s) 343
Bpu10I CCTNAGC 1 cut(s) 765
Bpu14I TTCGAA 1 cut(s) 1413
BpuEI CTTGAG 4 cut(s) 467, 485, 2156, 2286
BpuMI CCSGG 1 cut(s) 451
BsaAI YACGTR 3 cut(s) 317, 1538, 2204
BsaHI GRCGYC 4 cut(s) 458, 474, 699, 717
BsaJI CCNNGG 2 cut(s) 667, 1629
BsaWI WCCGGW 2 cut(s) 779, 1944
Bsc4I CCNNNNNNNGG 4 cut(s) 484, 1630, 1635, 1927
Bse118I RCCGGY 2 cut(s) 695, 719
Bse1I ACTGG 5 cut(s) 119, 904, 1329, 1437, 1944
Bse3DI GCAATG 3 cut(s) 332, 1481, 2089
BseAI TCCGGA 1 cut(s) 1944
BseBI CCWGG 4 cut(s) 557, 1269, 1667, 2253
BseDI CCNNGG 2 cut(s) 667, 1629
BseGI GGATG 9 cut(s) 148, 269, 576, 625, 754, 804, 1399, 1651, 1967
BseLI CCNNNNNNNGG 4 cut(s) 484, 1630, 1635, 1927
BseMI GCAATG 3 cut(s) 332, 1481, 2089
BseMII CTCAG 4 cut(s) 411, 505, 1308, 1693
BseNI ACTGG 5 cut(s) 119, 904, 1329, 1437, 1944
BseRI GAGGAG 4 cut(s) 206, 309, 346, 1183
BseSI GKGCMC 2 cut(s) 433, 787
BseX3I CGGCCG 1 cut(s) 657
BseXI GCAGC 6 cut(s) 398, 649, 1448, 1556, 1685, 2137
BsgI GTGCAG 1 cut(s) 1614
Bsh1236I CGCG 1 cut(s) 633
Bsh1285I CGRYCG 1 cut(s) 660
BshFI GGCC 6 cut(s) 331, 431, 555, 659, 1163, 2222
BshNI GGYRCC 1 cut(s) 1140
BsiEI CGRYCG 1 cut(s) 660
BsiHKAI GWGCWC 3 cut(s) 501, 787, 1872
BsiSI CCGG 5 cut(s) 451, 696, 720, 780, 1945
BsiWI CGTACG 1 cut(s) 1538
BslFI GGGAC 4 cut(s) 268, 545, 1607, 2167
BslI CCNNNNNNNGG 4 cut(s) 484, 1630, 1635, 1927
BsmAI GTCTC 6 cut(s) 75, 406, 929, 1041, 1573, 2139
BsmFI GGGAC 4 cut(s) 268, 545, 1607, 2167
BsmI GAATGC 2 cut(s) 50, 2041
BsnI GGCC 6 cut(s) 331, 431, 555, 659, 1163, 2222
Bsp119I TTCGAA 1 cut(s) 1413
Bsp120I GGGCCC 1 cut(s) 429
Bsp1286I GDGCHC 5 cut(s) 433, 501, 595, 787, 1872
Bsp13I TCCGGA 1 cut(s) 1944
Bsp143I GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
Bsp68I TCGCGA 1 cut(s) 633
BspANI GGCC 6 cut(s) 331, 431, 555, 659, 1163, 2222
BspCNI CTCAG 4 cut(s) 410, 504, 1309, 1692
BspEI TCCGGA 1 cut(s) 1944
BspFNI CGCG 1 cut(s) 633
BspHI TCATGA 2 cut(s) 1258, 1519
BspLI GGNNCC 6 cut(s) 355, 430, 431, 561, 822, 1142
BspMAI CTGCAG 1 cut(s) 1466
BspMI ACCTGC 2 cut(s) 1455, 1586
BspPI GGATC 4 cut(s) 1096, 1259, 1335, 2318
BspT104I TTCGAA 1 cut(s) 1413
BspT107I GGYRCC 1 cut(s) 1140
BspTI CTTAAG 1 cut(s) 793
BsrDI GCAATG 3 cut(s) 332, 1481, 2089
BsrFI RCCGGY 2 cut(s) 695, 719
BsrI ACTGG 5 cut(s) 119, 904, 1329, 1437, 1944
BssAI RCCGGY 2 cut(s) 695, 719
BssECI CCNNGG 2 cut(s) 667, 1629
BssMI GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
BssNI GRCGYC 4 cut(s) 458, 474, 699, 717
BssT1I CCWWGG 1 cut(s) 1629
Bst2UI CCWGG 4 cut(s) 557, 1269, 1667, 2253
Bst4CI ACNGT 4 cut(s) 86, 960, 1737, 1789
Bst6I CTCTTC 2 cut(s) 421, 1201
BstACI GRCGYC 4 cut(s) 458, 474, 699, 717
BstAFI CTTAAG 1 cut(s) 793
BstAPI GCANNNNNTGC 1 cut(s) 1841
BstBAI YACGTR 3 cut(s) 317, 1538, 2204
BstBI TTCGAA 1 cut(s) 1413
BstC8I GCNNGC 9 cut(s) 682, 697, 721, 819, 1428, 1488, 1549, 1929, 2290
BstDEI CTNAG 9 cut(s) 101, 153, 397, 491, 765, 866, 1010, 1317, 1679
BstF5I GGATG 9 cut(s) 148, 269, 576, 625, 754, 804, 1399, 1651, 1967
BstFNI CGCG 1 cut(s) 633
BstH2I RGCGCY 1 cut(s) 326
BstHHI GCGC 1 cut(s) 325
BstKTI GATC 8 cut(s) 1091, 1267, 1330, 1441, 1565, 1775, 1860, 2326
BstMAI GTCTC 6 cut(s) 75, 406, 929, 1041, 1573, 2139
BstMBI GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
BstMCI CGRYCG 1 cut(s) 660
BstNI CCWGG 4 cut(s) 557, 1269, 1667, 2253
BstNSI RCATGY 2 cut(s) 341, 2005
BstSCI CCNGG 5 cut(s) 449, 555, 1267, 1665, 2251
BstSFI CTRYAG 2 cut(s) 1331, 1462
BstSLI GKGCMC 2 cut(s) 433, 787
BstSNI TACGTA 2 cut(s) 1538, 2204
BstUI CGCG 1 cut(s) 633
BstV1I GCAGC 6 cut(s) 398, 649, 1448, 1556, 1685, 2137
BstV2I GAAGAC 1 cut(s) 264
BstX2I RGATCY 4 cut(s) 1088, 1327, 1562, 1857
BstXI CCANNNNNNTGG 2 cut(s) 1159, 1777
BstYI RGATCY 4 cut(s) 1088, 1327, 1562, 1857
BstZI CGGCCG 1 cut(s) 657
BsuRI GGCC 6 cut(s) 331, 431, 555, 659, 1163, 2222
BtgZI GCGATG 1 cut(s) 63
BtsCI GGATG 9 cut(s) 148, 269, 576, 625, 754, 804, 1399, 1651, 1967
BtsIMutI CAGTG 4 cut(s) 956, 1430, 1687, 1937
BtuMI TCGCGA 1 cut(s) 633
BveI ACCTGC 2 cut(s) 1455, 1586
Cac8I GCNNGC 9 cut(s) 682, 697, 721, 819, 1428, 1488, 1549, 1929, 2290
CaiI CAGNNNCTG 1 cut(s) 2213
CciI TCATGA 2 cut(s) 1258, 1519
CfoI GCGC 1 cut(s) 325
Cfr10I RCCGGY 2 cut(s) 695, 719
Cfr13I GGNCC 6 cut(s) 429, 430, 439, 559, 1942, 2220
CseI GACGC 2 cut(s) 688, 725
Csp6I GTAC 7 cut(s) 909, 1141, 1149, 1535, 1539, 1733, 2205
CviAII CATG 9 cut(s) 338, 853, 1259, 1520, 1864, 2002, 2282, 2314, 2397
CviQI GTAC 7 cut(s) 909, 1141, 1149, 1535, 1539, 1733, 2205
DdeI CTNAG 9 cut(s) 101, 153, 397, 491, 765, 866, 1010, 1317, 1679
DpnI GATC 8 cut(s) 1090, 1266, 1329, 1440, 1564, 1774, 1859, 2325
DpnII GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
DraIII CACNNNGTG 1 cut(s) 164
DrdI GACNNNNNNGTC 1 cut(s) 473
DriI GACNNNNNGTC 1 cut(s) 265
DseDI GACNNNNNNGTC 1 cut(s) 473
EaeI YGGCCR 2 cut(s) 329, 657
EagI CGGCCG 1 cut(s) 657
Eam1104I CTCTTC 2 cut(s) 421, 1201
Eam1105I GACNNNNNGTC 1 cut(s) 265
EarI CTCTTC 2 cut(s) 421, 1201
EciI GGCGGA 3 cut(s) 241, 394, 400
Ecl136II GAGCTC 2 cut(s) 499, 1870
EclXI CGGCCG 1 cut(s) 657
Eco105I TACGTA 2 cut(s) 1538, 2204
Eco130I CCWWGG 1 cut(s) 1629
Eco24I GRGCYC 4 cut(s) 433, 501, 595, 1872
Eco47I GGWCC 3 cut(s) 439, 559, 1942
Eco47III AGCGCT 1 cut(s) 324
Eco52I CGGCCG 1 cut(s) 657
Eco53kI GAGCTC 2 cut(s) 499, 1870
Eco57I CTGAAG 2 cut(s) 129, 2013
EcoICRI GAGCTC 2 cut(s) 499, 1870
EcoO109I RGGNCCY 1 cut(s) 429
EcoRII CCWGG 4 cut(s) 555, 1267, 1665, 2251
EcoT14I CCWWGG 1 cut(s) 1629
EcoT38I GRGCYC 4 cut(s) 433, 501, 595, 1872
ErhI CCWWGG 1 cut(s) 1629
FaeI CATG 9 cut(s) 341, 856, 1262, 1523, 1867, 2005, 2285, 2317, 2400
FalI AAGNNNNNCTT 4 cut(s) 524, 556, 664, 696
FaqI GGGAC 4 cut(s) 268, 545, 1607, 2167
FatI CATG 9 cut(s) 337, 852, 1258, 1519, 1863, 2001, 2281, 2313, 2396
FauI CCCGC 1 cut(s) 419
FokI GGATG 9 cut(s) 135, 256, 563, 612, 741, 811, 1386, 1658, 1974
FriOI GRGCYC 4 cut(s) 433, 501, 595, 1872
FspBI CTAG 8 cut(s) 114, 162, 588, 1040, 1305, 1340, 1470, 2333
GlaI GCGC 1 cut(s) 324
GsuI CTGGAG 1 cut(s) 343
HaeII RGCGCY 1 cut(s) 326
HaeIII GGCC 6 cut(s) 331, 431, 555, 659, 1163, 2222
HapII CCGG 5 cut(s) 451, 696, 720, 780, 1945
HgaI GACGC 2 cut(s) 688, 725
HhaI GCGC 1 cut(s) 325
Hin1I GRCGYC 4 cut(s) 458, 474, 699, 717
Hin1II CATG 9 cut(s) 341, 856, 1262, 1523, 1867, 2005, 2285, 2317, 2400
Hin6I GCGC 1 cut(s) 323
HinP1I GCGC 1 cut(s) 323
HindIII AAGCTT 2 cut(s) 673, 2342
HinfI GANTC 9 cut(s) 348, 467, 776, 1034, 1390, 1473, 1781, 1948, 2230
HpaII CCGG 5 cut(s) 451, 696, 720, 780, 1945
HphI GGTGA 6 cut(s) 50, 150, 334, 384, 453, 2396
Hpy166II GTNNAC 3 cut(s) 785, 1850, 2373
Hpy8I GTNNAC 3 cut(s) 785, 1850, 2373
Hpy99I CGWCG 5 cut(s) 373, 376, 476, 572, 719
HpyAV CCTTC 8 cut(s) 550, 848, 946, 995, 1004, 1409, 1451, 2389
HpyCH4III ACNGT 4 cut(s) 86, 960, 1737, 1789
HpyCH4IV ACGT 9 cut(s) 316, 458, 474, 787, 925, 1537, 1695, 1826, 2203
HpyF3I CTNAG 9 cut(s) 101, 153, 397, 491, 765, 866, 1010, 1317, 1679
HpySE526I ACGT 9 cut(s) 316, 458, 474, 787, 925, 1537, 1695, 1826, 2203
Hsp92I GRCGYC 4 cut(s) 458, 474, 699, 717
Hsp92II CATG 9 cut(s) 341, 856, 1262, 1523, 1867, 2005, 2285, 2317, 2400
HspAI GCGC 1 cut(s) 323
Kpn2I TCCGGA 1 cut(s) 1944
KpnI GGTACC 1 cut(s) 1144
KroI GCCGGC 2 cut(s) 695, 719
KroNI GCCGGC 2 cut(s) 697, 721
Kzo9I GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
LmnI GCTCC 5 cut(s) 320, 359, 826, 1294, 1867
Lsp1109I GCAGC 6 cut(s) 398, 649, 1448, 1556, 1685, 2137
MaeI CTAG 8 cut(s) 114, 162, 588, 1040, 1305, 1340, 1470, 2333
MaeII ACGT 9 cut(s) 316, 458, 474, 787, 925, 1537, 1695, 1826, 2203
MaeIII GTNAC 8 cut(s) 38, 156, 340, 459, 895, 1395, 1901, 2058
MalI GATC 8 cut(s) 1090, 1266, 1329, 1440, 1564, 1774, 1859, 2325
MboI GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
MboII GAAGA 8 cut(s) 269, 408, 854, 1066, 1188, 1852, 1872, 2006
MfeI CAATTG 1 cut(s) 2027
MflI RGATCY 4 cut(s) 1088, 1327, 1562, 1857
MhlI GDGCHC 5 cut(s) 433, 501, 595, 787, 1872
MlsI TGGCCA 1 cut(s) 331
MluNI TGGCCA 1 cut(s) 331
MlyI GAGTC 3 cut(s) 461, 1043, 1399
MmeI TCCRAC 4 cut(s) 121, 495, 1258, 1434
Mox20I TGGCCA 1 cut(s) 331
MreI CGCCGGCG 1 cut(s) 719
MroI TCCGGA 1 cut(s) 1944
MroNI GCCGGC 2 cut(s) 695, 719
MscI TGGCCA 1 cut(s) 331
MseI TTAA 9 cut(s) 90, 194, 794, 978, 986, 1310, 1559, 1796, 1814
MslI CAYNNNNRTG 2 cut(s) 759, 1049
Msp20I TGGCCA 1 cut(s) 331
MspA1I CMGCKG 2 cut(s) 426, 662
MspCI CTTAAG 1 cut(s) 793
MspI CCGG 5 cut(s) 451, 696, 720, 780, 1945
MspR9I CCNGG 5 cut(s) 451, 557, 1269, 1667, 2253
MunI CAATTG 1 cut(s) 2027
Mva1269I GAATGC 2 cut(s) 50, 2041
MvaI CCWGG 4 cut(s) 557, 1269, 1667, 2253
MvnI CGCG 1 cut(s) 633
NaeI GCCGGC 2 cut(s) 697, 721
NciI CCSGG 1 cut(s) 451
NdeII GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
NgoMIV GCCGGC 2 cut(s) 695, 719
NlaIII CATG 9 cut(s) 341, 856, 1262, 1523, 1867, 2005, 2285, 2317, 2400
NlaIV GGNNCC 6 cut(s) 355, 430, 431, 561, 822, 1142
NmeAIII GCCGAG 1 cut(s) 531
NmuCI GTSAC 5 cut(s) 38, 156, 340, 459, 1901
NruI TCGCGA 1 cut(s) 633
NspI RCATGY 2 cut(s) 341, 2005
NspV TTCGAA 1 cut(s) 1413
PagI TCATGA 2 cut(s) 1258, 1519
PcsI WCGNNNNNNNCGW 2 cut(s) 696, 720
PctI GAATGC 2 cut(s) 50, 2041
PdiI GCCGGC 2 cut(s) 697, 721
PfeI GAWTC 6 cut(s) 348, 776, 1473, 1781, 1948, 2230
Pfl23II CGTACG 1 cut(s) 1538
PleI GAGTC 3 cut(s) 461, 1042, 1398
PpsI GAGTC 3 cut(s) 461, 1042, 1398
Ppu21I YACGTR 3 cut(s) 317, 1538, 2204
PsiI TTATAA 1 cut(s) 1184
Psp124BI GAGCTC 2 cut(s) 501, 1872
Psp6I CCWGG 4 cut(s) 555, 1267, 1665, 2251
PspGI CCWGG 4 cut(s) 555, 1267, 1665, 2251
PspLI CGTACG 1 cut(s) 1538
PspN4I GGNNCC 6 cut(s) 355, 430, 431, 561, 822, 1142
PspOMI GGGCCC 1 cut(s) 429
PspPI GGNCC 6 cut(s) 429, 430, 439, 559, 1942, 2220
PstI CTGCAG 1 cut(s) 1466
PstNI CAGNNNCTG 1 cut(s) 2213
PsuI RGATCY 4 cut(s) 1088, 1327, 1562, 1857
RruI TCGCGA 1 cut(s) 633
RsaI GTAC 7 cut(s) 910, 1142, 1150, 1536, 1540, 1734, 2206
RsaNI GTAC 7 cut(s) 909, 1141, 1149, 1535, 1539, 1733, 2205
RseI CAYNNNNRTG 2 cut(s) 759, 1049
SacI GAGCTC 2 cut(s) 501, 1872
SaqAI TTAA 9 cut(s) 90, 194, 794, 978, 986, 1310, 1559, 1796, 1814
Sau3AI GATC 8 cut(s) 1088, 1264, 1327, 1438, 1562, 1772, 1857, 2323
Sau96I GGNCC 6 cut(s) 429, 430, 439, 559, 1942, 2220
SchI GAGTC 3 cut(s) 461, 1043, 1399
ScrFI CCNGG 5 cut(s) 451, 557, 1269, 1667, 2253
SduI GDGCHC 5 cut(s) 433, 501, 595, 787, 1872
SfcI CTRYAG 2 cut(s) 1331, 1462
SfuI TTCGAA 1 cut(s) 1413
SgrAI CRCCGGYG 1 cut(s) 719
SinI GGWCC 3 cut(s) 439, 559, 1942
SmiMI CAYNNNNRTG 2 cut(s) 759, 1049
SmlI CTYRAG 5 cut(s) 482, 500, 793, 2171, 2301
SmoI CTYRAG 5 cut(s) 482, 500, 793, 2171, 2301
SnaBI TACGTA 2 cut(s) 1538, 2204
SspI AATATT 1 cut(s) 1422
SspMI CTAG 8 cut(s) 114, 162, 588, 1040, 1305, 1340, 1470, 2333
SstI GAGCTC 2 cut(s) 501, 1872
StyD4I CCNGG 5 cut(s) 449, 555, 1267, 1665, 2251
StyI CCWWGG 1 cut(s) 1629
TaaI ACNGT 4 cut(s) 86, 960, 1737, 1789
TaiI ACGT 9 cut(s) 319, 461, 477, 790, 928, 1540, 1698, 1829, 2206
TaqI TCGA 7 cut(s) 690, 714, 774, 1065, 1224, 1413, 2347
TaqII GACCGA 1 cut(s) 1563
TatI WGTACW 1 cut(s) 1732
TauI GCSGC 4 cut(s) 575, 662, 687, 2268
TfiI GAWTC 6 cut(s) 348, 776, 1473, 1781, 1948, 2230
Tru1I TTAA 9 cut(s) 90, 194, 794, 978, 986, 1310, 1559, 1796, 1814
Tru9I TTAA 9 cut(s) 90, 194, 794, 978, 986, 1310, 1559, 1796, 1814
TscAI CASTG 4 cut(s) 963, 1437, 1687, 1944
TseFI GTSAC 5 cut(s) 38, 156, 340, 459, 1901
TseI GCWGC 6 cut(s) 386, 662, 1461, 1544, 1673, 2125
Tsp45I GTSAC 5 cut(s) 38, 156, 340, 459, 1901
TspRI CASTG 4 cut(s) 963, 1437, 1687, 1944
Vha464I CTTAAG 1 cut(s) 793
VneI GTGCAC 1 cut(s) 783
VpaK11BI GGWCC 3 cut(s) 439, 559, 1942
XapI RAATTY 5 cut(s) 183, 203, 1585, 2052, 2102
XbaI TCTAGA 2 cut(s) 587, 1469
XceI RCATGY 2 cut(s) 341, 2005
XspI CTAG 8 cut(s) 114, 162, 588, 1040, 1305, 1340, 1470, 2333
ZraI GACGTC 2 cut(s) 459, 475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.